BLASTX nr result

ID: Ziziphus21_contig00039786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00039786
         (286 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    57   5e-06

>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
 Frame = -1

Query: 283 HLVEGPRGR-GGLALFWKDECC*EIIFSFEWCIGVQVNSIQGKKWNL*SCDCPAECSLRG 107
           H VE P GR GGLA+FWK     E +++ +  + +QV+S + K W +          +R 
Sbjct: 56  HTVE-PEGRSGGLAIFWKSHLEIEFLYADKNLMDLQVSS-RNKVWFISCVYGLPVTHMRP 113

Query: 106 EFWKTLTECVYSSHDAWACIGDFNDIVNQDEKQGG 2
           + W+ L        +AW  IGDFNDI + DEK GG
Sbjct: 114 KLWEHLNSIGLKRAEAWCLIGDFNDIRSNDEKLGG 148


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