BLASTX nr result
ID: Ziziphus21_contig00039666
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00039666
(202 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KCW52064.1| hypothetical protein EUGRSUZ_J01502 [Eucalyptus g... 47 9e-10
ref|XP_010032637.1| PREDICTED: ribulose bisphosphate carboxylase... 47 9e-10
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 47 9e-10
gb|KCW52065.1| hypothetical protein EUGRSUZ_J01502 [Eucalyptus g... 47 9e-10
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 49 4e-09
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox... 49 4e-09
ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase... 47 5e-09
sp|Q42516.1|RBS1_AMAHP RecName: Full=Ribulose bisphosphate carbo... 47 7e-09
sp|Q08186.1|RBS6_MESCR RecName: Full=Ribulose bisphosphate carbo... 45 9e-09
emb|CAD21856.1| putative ribulose 1,5 biphosphate carboxylase sm... 47 2e-08
gb|AEA48975.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 47 2e-08
gb|AAO25119.1| ribulose-1,5-bisphosphate carboxylase small subun... 48 3e-08
ref|XP_010263795.1| PREDICTED: ribulose bisphosphate carboxylase... 47 3e-08
ref|XP_010669829.1| PREDICTED: ribulose bisphosphate carboxylase... 46 3e-08
ref|XP_010044264.1| PREDICTED: ribulose bisphosphate carboxylase... 44 3e-08
sp|P07089.1|RBS_FLATR RecName: Full=Ribulose bisphosphate carbox... 47 3e-08
gb|AAP31054.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 47 3e-08
gb|AAP31053.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 47 3e-08
sp|O22572.1|RBS2_FRIAG RecName: Full=Ribulose bisphosphate carbo... 45 4e-08
sp|O22645.1|RBS5_FRIAG RecName: Full=Ribulose bisphosphate carbo... 45 4e-08
>gb|KCW52064.1| hypothetical protein EUGRSUZ_J01502 [Eucalyptus grandis]
Length = 192
Score = 47.4 bits (111), Expect(2) = 9e-10
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -3
Query: 74 PAMGGRVQCMKVWPPINMKKFETL 3
P+ GGRVQCM+VWPP+ +KKFETL
Sbjct: 50 PSNGGRVQCMQVWPPVGLKKFETL 73
Score = 42.4 bits (98), Expect(2) = 9e-10
Identities = 21/29 (72%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSGV-SLPSNG 64
VAPF GLKS S +PVTRKS+ + SLPSNG
Sbjct: 25 VAPFTGLKSASAFPVTRKSNDITSLPSNG 53
>ref|XP_010032637.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic [Eucalyptus grandis]
Length = 181
Score = 47.4 bits (111), Expect(2) = 9e-10
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -3
Query: 74 PAMGGRVQCMKVWPPINMKKFETL 3
P+ GGRVQCM+VWPP+ +KKFETL
Sbjct: 50 PSNGGRVQCMQVWPPVGLKKFETL 73
Score = 42.4 bits (98), Expect(2) = 9e-10
Identities = 21/29 (72%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSGV-SLPSNG 64
VAPF GLKS S +PVTRKS+ + SLPSNG
Sbjct: 25 VAPFTGLKSASAFPVTRKSNDITSLPSNG 53
>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 47.4 bits (111), Expect(2) = 9e-10
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -3
Query: 74 PAMGGRVQCMKVWPPINMKKFETL 3
P+ GGRVQCM+VWPP+ +KKFETL
Sbjct: 50 PSNGGRVQCMQVWPPVGLKKFETL 73
Score = 42.4 bits (98), Expect(2) = 9e-10
Identities = 21/29 (72%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSGV-SLPSNG 64
VAPF GLKS S +PVTRKS+ + SLPSNG
Sbjct: 25 VAPFTGLKSASAFPVTRKSNDITSLPSNG 53
>gb|KCW52065.1| hypothetical protein EUGRSUZ_J01502 [Eucalyptus grandis]
Length = 180
Score = 47.4 bits (111), Expect(2) = 9e-10
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -3
Query: 74 PAMGGRVQCMKVWPPINMKKFETL 3
P+ GGRVQCM+VWPP+ +KKFETL
Sbjct: 50 PSNGGRVQCMQVWPPVGLKKFETL 73
Score = 42.4 bits (98), Expect(2) = 9e-10
Identities = 21/29 (72%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSGV-SLPSNG 64
VAPF GLKS S +PVTRKS+ + SLPSNG
Sbjct: 25 VAPFTGLKSASAFPVTRKSNDITSLPSNG 53
>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Panax ginseng]
Length = 183
Score = 48.5 bits (114), Expect(2) = 4e-09
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -3
Query: 74 PAMGGRVQCMKVWPPINMKKFETL 3
P+ GGRVQCMKVWPP+ +KKFETL
Sbjct: 50 PSNGGRVQCMKVWPPLGLKKFETL 73
Score = 38.9 bits (89), Expect(2) = 4e-09
Identities = 19/29 (65%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSGV-SLPSNG 64
VAPF GLKS + +PVTRK + + SLPSNG
Sbjct: 25 VAPFTGLKSTAAFPVTRKVNDITSLPSNG 53
>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Aralia elata]
Length = 183
Score = 48.5 bits (114), Expect(2) = 4e-09
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -3
Query: 74 PAMGGRVQCMKVWPPINMKKFETL 3
P+ GGRVQCMKVWPP+ +KKFETL
Sbjct: 50 PSNGGRVQCMKVWPPLGLKKFETL 73
Score = 38.9 bits (89), Expect(2) = 4e-09
Identities = 19/29 (65%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSGV-SLPSNG 64
VAPF GLKS + +PVTRK + + SLPSNG
Sbjct: 25 VAPFTGLKSTAAFPVTRKVNDITSLPSNG 53
>ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 182
Score = 47.4 bits (111), Expect(2) = 5e-09
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -3
Query: 74 PAMGGRVQCMKVWPPINMKKFETL 3
P+ GGRVQCM+VWPP+ +KKFETL
Sbjct: 51 PSNGGRVQCMQVWPPVGLKKFETL 74
Score = 39.7 bits (91), Expect(2) = 5e-09
Identities = 19/30 (63%), Positives = 23/30 (76%), Gaps = 2/30 (6%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSG--VSLPSNG 64
VAPF GLKS S +P+TRK++ SLPSNG
Sbjct: 25 VAPFTGLKSASAFPITRKTNSDITSLPSNG 54
>sp|Q42516.1|RBS1_AMAHP RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
chloroplastic; Short=RuBisCO small subunit 1; Flags:
Precursor gi|5002361|gb|AAD37438.1|AF150665_1 ribulose
1,5 bisphosphate carboxylase small subunit precursor
[Amaranthus hypochondriacus] gi|809533|emb|CAA60636.1|
ribulose 1,5-bisphosphate carboxylase-oxygenase
[Amaranthus hypochondriacus]
Length = 183
Score = 46.6 bits (109), Expect(2) = 7e-09
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 83 SPSPAMGGRVQCMKVWPPINMKKFETL 3
S P+ GGRVQCM+VWPP+ KKFETL
Sbjct: 48 SSLPSNGGRVQCMQVWPPVGKKKFETL 74
Score = 40.0 bits (92), Expect(2) = 7e-09
Identities = 20/30 (66%), Positives = 24/30 (80%), Gaps = 2/30 (6%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSG--VSLPSNG 64
VAPF GLKS +T+P+T+KSS SLPSNG
Sbjct: 25 VAPFNGLKSFATFPITKKSSNDFSSLPSNG 54
>sp|Q08186.1|RBS6_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 6,
chloroplastic; Short=RuBisCO small subunit 6; Flags:
Precursor gi|304447|gb|AAA03698.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
Length = 186
Score = 45.1 bits (105), Expect(2) = 9e-09
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -3
Query: 83 SPSPAMGGRVQCMKVWPPINMKKFETL 3
S P+ GG+VQCM+VWPP+ KKFETL
Sbjct: 50 STVPSNGGKVQCMQVWPPLGKKKFETL 76
Score = 41.2 bits (95), Expect(2) = 9e-09
Identities = 21/32 (65%), Positives = 25/32 (78%), Gaps = 2/32 (6%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSG--VSLPSNGWK 58
VAPF GLKS+S +PVTRKSS ++PSNG K
Sbjct: 27 VAPFTGLKSVSAFPVTRKSSNDLSTVPSNGGK 58
>emb|CAD21856.1| putative ribulose 1,5 biphosphate carboxylase small subunit
percursor [Rumex obtusifolius]
Length = 181
Score = 47.4 bits (111), Expect(2) = 2e-08
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = -2
Query: 153 TTVAPFVGLKSMSTYPVTRKSSGVSLPSNGWK 58
T +APF GLK+++T+P TRKSS +S PSNG K
Sbjct: 20 TVIAPFTGLKNIATFPTTRKSSDLSFPSNGGK 51
Score = 38.1 bits (87), Expect(2) = 2e-08
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -3
Query: 74 PAMGGRVQCMKVWPPINMKKFETL 3
P+ GG+V+CM+VWPP KFETL
Sbjct: 46 PSNGGKVRCMQVWPPEGKIKFETL 69
>gb|AEA48975.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [Rosa
roxburghii]
Length = 179
Score = 47.0 bits (110), Expect(2) = 2e-08
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 74 PAMGGRVQCMKVWPPINMKKFETL 3
P+ GGRVQCMKVWP + MKKFETL
Sbjct: 50 PSNGGRVQCMKVWPTVGMKKFETL 73
Score = 38.5 bits (88), Expect(2) = 2e-08
Identities = 18/30 (60%), Positives = 23/30 (76%), Gaps = 2/30 (6%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSG--VSLPSNG 64
VAPF GLKS + +P+TRK++ SLPSNG
Sbjct: 24 VAPFTGLKSAAAFPITRKTNSDITSLPSNG 53
>gb|AAO25119.1| ribulose-1,5-bisphosphate carboxylase small subunit [Chrysanthemum
x morifolium]
Length = 179
Score = 47.8 bits (112), Expect(2) = 3e-08
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -3
Query: 83 SPSPAMGGRVQCMKVWPPINMKKFETL 3
S P+ GGRVQCMKVWPP+ +KK+ETL
Sbjct: 45 SSLPSNGGRVQCMKVWPPLGLKKYETL 71
Score = 37.0 bits (84), Expect(2) = 3e-08
Identities = 19/29 (65%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSGV-SLPSNG 64
VAPF GLKS +PVT+KS+ SLPSNG
Sbjct: 23 VAPFTGLKSNVAFPVTKKSNDFSSLPSNG 51
>ref|XP_010263795.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Nelumbo nucifera]
Length = 184
Score = 46.6 bits (109), Expect(2) = 3e-08
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -3
Query: 80 PSPAMGGRVQCMKVWPPINMKKFETL 3
P P+ GGRVQCM+VWPP KKFETL
Sbjct: 51 PLPSNGGRVQCMQVWPPTGKKKFETL 76
Score = 37.7 bits (86), Expect(2) = 3e-08
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 4/32 (12%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKS----SGVSLPSNG 64
VAPF GLKS S +PVTRK+ + + LPSNG
Sbjct: 25 VAPFTGLKSASAFPVTRKANNDITSLPLPSNG 56
>ref|XP_010669829.1| PREDICTED: ribulose bisphosphate carboxylase small chain 6,
chloroplastic-like [Beta vulgaris subsp. vulgaris]
gi|870866560|gb|KMT17519.1| hypothetical protein
BVRB_2g037220 [Beta vulgaris subsp. vulgaris]
Length = 183
Score = 46.2 bits (108), Expect(2) = 3e-08
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 83 SPSPAMGGRVQCMKVWPPINMKKFETL 3
S P+ GGRVQCM+VWPP+ KKFETL
Sbjct: 49 SSLPSNGGRVQCMQVWPPLGKKKFETL 75
Score = 38.1 bits (87), Expect(2) = 3e-08
Identities = 18/29 (62%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSGV-SLPSNG 64
VAPF GLKS++ +PVT+ S+ + SLPSNG
Sbjct: 27 VAPFTGLKSIAAFPVTKSSNDLSSLPSNG 55
>ref|XP_010044264.1| PREDICTED: ribulose bisphosphate carboxylase small chain 3B,
chloroplastic-like [Eucalyptus grandis]
gi|270383724|dbj|BAI53120.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit [Eucalyptus
globulus] gi|629121834|gb|KCW86324.1| hypothetical
protein EUGRSUZ_B03013 [Eucalyptus grandis]
Length = 179
Score = 44.3 bits (103), Expect(2) = 3e-08
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 65 GGRVQCMKVWPPINMKKFETL 3
GGRVQCM+VWPPI KKFETL
Sbjct: 51 GGRVQCMQVWPPIGKKKFETL 71
Score = 40.0 bits (92), Expect(2) = 3e-08
Identities = 22/32 (68%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = -2
Query: 153 TTVAPFVGLKSMSTYPVTRKSSG--VSLPSNG 64
T VAPF GLKS S +PVTRKSS SL SNG
Sbjct: 20 TMVAPFTGLKSASAFPVTRKSSEDITSLSSNG 51
>sp|P07089.1|RBS_FLATR RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|18466|emb|CAA28711.1| unnamed protein
product [Flaveria trinervia]
Length = 173
Score = 47.0 bits (110), Expect(2) = 3e-08
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 83 SPSPAMGGRVQCMKVWPPINMKKFETL 3
S P+ GGRVQCMKVWPP+ KK+ETL
Sbjct: 39 STLPSNGGRVQCMKVWPPVGKKKYETL 65
Score = 37.4 bits (85), Expect(2) = 3e-08
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSGVS-LPSNG 64
VAPF GLK+ + +PVT+K +G S LPSNG
Sbjct: 17 VAPFTGLKANAAFPVTKKVNGFSTLPSNG 45
>gb|AAP31054.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Flaveria bidentis]
Length = 173
Score = 47.0 bits (110), Expect(2) = 3e-08
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 83 SPSPAMGGRVQCMKVWPPINMKKFETL 3
S P+ GGRVQCMKVWPP+ KK+ETL
Sbjct: 39 STLPSNGGRVQCMKVWPPVGKKKYETL 65
Score = 37.4 bits (85), Expect(2) = 3e-08
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSGVS-LPSNG 64
VAPF GLK+ + +PVT+K +G S LPSNG
Sbjct: 17 VAPFTGLKANAAFPVTKKVNGFSTLPSNG 45
>gb|AAP31053.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Flaveria bidentis]
Length = 173
Score = 47.0 bits (110), Expect(2) = 3e-08
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 83 SPSPAMGGRVQCMKVWPPINMKKFETL 3
S P+ GGRVQCMKVWPP+ KK+ETL
Sbjct: 39 STLPSNGGRVQCMKVWPPVGKKKYETL 65
Score = 37.4 bits (85), Expect(2) = 3e-08
Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKSSGVS-LPSNG 64
VAPF GLK+ + +PVT+K +G S LPSNG
Sbjct: 17 VAPFTGLKANAAFPVTKKVNGFSTLPSNG 45
>sp|O22572.1|RBS2_FRIAG RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|2605708|gb|AAB84180.1| ribulose 1,5
bisphosphate carboxylase, small subunit type II
[Fritillaria agrestis]
Length = 179
Score = 45.4 bits (106), Expect(2) = 4e-08
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 83 SPSPAMGGRVQCMKVWPPINMKKFETL 3
S P+ GGRVQCMKVWP + +KKFETL
Sbjct: 48 STLPSNGGRVQCMKVWPIVGLKKFETL 74
Score = 38.5 bits (88), Expect(2) = 4e-08
Identities = 21/30 (70%), Positives = 26/30 (86%), Gaps = 2/30 (6%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRKS-SGVS-LPSNG 64
VAPFVGLKS S +PVT+K+ +G+S LPSNG
Sbjct: 25 VAPFVGLKSASAFPVTQKTVTGLSTLPSNG 54
>sp|O22645.1|RBS5_FRIAG RecName: Full=Ribulose bisphosphate carboxylase small chain 5,
chloroplastic; Short=RuBisCO small subunit 5; Flags:
Precursor gi|2641205|gb|AAB86854.1| ribulose 1,5
bisphosphate carboxylase small subunit type V
[Fritillaria agrestis]
Length = 179
Score = 45.4 bits (106), Expect(2) = 4e-08
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 83 SPSPAMGGRVQCMKVWPPINMKKFETL 3
S P+ GGRVQCMKVWP + +KKFETL
Sbjct: 48 STLPSNGGRVQCMKVWPIVGLKKFETL 74
Score = 38.5 bits (88), Expect(2) = 4e-08
Identities = 21/30 (70%), Positives = 26/30 (86%), Gaps = 2/30 (6%)
Frame = -2
Query: 147 VAPFVGLKSMSTYPVTRK-SSGVS-LPSNG 64
VAPFVGLKS S +PVT+K ++G+S LPSNG
Sbjct: 25 VAPFVGLKSASAFPVTQKTATGLSTLPSNG 54