BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00038182
         (247 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...    57   7e-06
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...    56   9e-06

>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -3

Query: 212 SESKGEGLTVRGRSTTRSWGHNDHRSKSREHPRSKSRIRGRK-CYYCNREGHFIKNCF 42
           S SKGE L VRGRS  R++  +  R KS+   RSKS  RG+K C YC ++ HFI+ C+
Sbjct: 195 SSSKGEALQVRGRSEQRTYNDSSDRDKSQSRGRSKS--RGKKFCKYCKKKNHFIEECW 250


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
 Frame = -3

Query: 212 SESKGEGLTVRGRSTTRSWGHNDHRSKSREHPRSKSRIRGRK-CYYCNREGHFIKNCF 42
           S SKGE L V+GRS  R++  ++ R KS+   RSKS  RG+K C YC ++ HFIK C+
Sbjct: 195 SSSKGEALQVKGRSEQRTYNDSNDRDKSKSRGRSKS--RGKKFCKYCKKKIHFIKECW 250