BLASTX nr result
ID: Ziziphus21_contig00037258
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00037258
(417 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008246339.1| PREDICTED: pentatricopeptide repeat-containi... 193 5e-47
ref|XP_007207191.1| hypothetical protein PRUPE_ppa017094mg [Prun... 192 6e-47
ref|XP_008359847.1| PREDICTED: pentatricopeptide repeat-containi... 189 5e-46
ref|XP_008345659.1| PREDICTED: pentatricopeptide repeat-containi... 186 8e-45
ref|XP_009366008.1| PREDICTED: pentatricopeptide repeat-containi... 182 7e-44
ref|XP_010094922.1| hypothetical protein L484_022672 [Morus nota... 177 2e-42
ref|XP_004304919.1| PREDICTED: pentatricopeptide repeat-containi... 166 8e-39
ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containi... 165 1e-38
emb|CBI39683.3| unnamed protein product [Vitis vinifera] 165 1e-38
gb|KGN61250.1| hypothetical protein Csa_2G074120 [Cucumis sativus] 164 2e-38
ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containi... 164 2e-38
ref|XP_011041357.1| PREDICTED: pentatricopeptide repeat-containi... 161 2e-37
ref|XP_008441882.1| PREDICTED: pentatricopeptide repeat-containi... 161 2e-37
ref|XP_002323212.2| pentatricopeptide repeat-containing family p... 160 3e-37
ref|XP_010516263.1| PREDICTED: pentatricopeptide repeat-containi... 151 2e-34
ref|XP_006402977.1| hypothetical protein EUTSA_v10005859mg [Eutr... 151 2e-34
ref|NP_191214.1| pentatricopeptide repeat-containing protein [Ar... 151 2e-34
ref|XP_010427484.1| PREDICTED: pentatricopeptide repeat-containi... 149 8e-34
ref|XP_010549168.1| PREDICTED: pentatricopeptide repeat-containi... 149 1e-33
ref|XP_002878095.1| pentatricopeptide repeat-containing protein ... 148 2e-33
>ref|XP_008246339.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Prunus mume]
Length = 601
Score = 193 bits (490), Expect = 5e-47
Identities = 100/138 (72%), Positives = 113/138 (81%), Gaps = 1/138 (0%)
Frame = +1
Query: 7 SMQSPEPLLCIVGQTSAAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHF 186
+M +PL V Q S K IL +LQGCNSL +L KIHAHVIT GLQH PAIS+KLL+F
Sbjct: 4 AMLPSQPLPNDVFQASKT-KAILALLQGCNSLIKLKKIHAHVITNGLQHQPAISNKLLNF 62
Query: 187 CAISVSGCLSYAQLLFHR-LQNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRP 363
CA+SVSGCL+YAQLLFH +QNP TQDWNS+IRGFS SPSPL AIFYYN M+S+ASDS P
Sbjct: 63 CAVSVSGCLAYAQLLFHHHIQNPQTQDWNSMIRGFSQSPSPLQAIFYYNHMLSSASDSCP 122
Query: 364 DTFTFSFVLKACERVKAQ 417
DTFTFSFVLKAC +VKAQ
Sbjct: 123 DTFTFSFVLKACVKVKAQ 140
>ref|XP_007207191.1| hypothetical protein PRUPE_ppa017094mg [Prunus persica]
gi|462402833|gb|EMJ08390.1| hypothetical protein
PRUPE_ppa017094mg [Prunus persica]
Length = 590
Score = 192 bits (489), Expect = 6e-47
Identities = 102/140 (72%), Positives = 115/140 (82%), Gaps = 1/140 (0%)
Frame = +1
Query: 1 HCSMQSPEPLLCIVGQTSAAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLL 180
H + S +PL V Q S A K IL +LQGCNSL RL KIHA+VIT GLQH AIS+KLL
Sbjct: 3 HAKLPS-QPLPNDVFQASKA-KAILALLQGCNSLIRLKKIHAYVITNGLQHQTAISNKLL 60
Query: 181 HFCAISVSGCLSYAQLLFHR-LQNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDS 357
+FCA+SVSGCL+YAQLLFH +QNP TQDWNS+IRGFS SPSPL AIFYYN M+S+ASDS
Sbjct: 61 NFCAVSVSGCLAYAQLLFHHHIQNPQTQDWNSMIRGFSQSPSPLQAIFYYNHMLSSASDS 120
Query: 358 RPDTFTFSFVLKACERVKAQ 417
PDTFTFSFVLKACE+VKAQ
Sbjct: 121 CPDTFTFSFVLKACEKVKAQ 140
>ref|XP_008359847.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Malus domestica]
Length = 587
Score = 189 bits (481), Expect = 5e-46
Identities = 92/123 (74%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Frame = +1
Query: 52 SAAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLL 231
++ K IL +LQGCNSLQR KIHAHVIT GLQ HPAIS+KLL+FCA+SVSG L YAQLL
Sbjct: 4 TSKTKAILSLLQGCNSLQRFKKIHAHVITNGLQPHPAISNKLLNFCAVSVSGSLPYAQLL 63
Query: 232 FHR-LQNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFVLKACERV 408
FH LQNP TQDWNS+IRGFS+SPSPL AIFYYN M+S+ SDS PDT+TFSFVLKACE++
Sbjct: 64 FHHHLQNPQTQDWNSLIRGFSNSPSPLQAIFYYNRMLSSGSDSSPDTYTFSFVLKACEKL 123
Query: 409 KAQ 417
KA+
Sbjct: 124 KAR 126
>ref|XP_008345659.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Malus domestica]
Length = 355
Score = 186 bits (471), Expect = 8e-45
Identities = 91/123 (73%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Frame = +1
Query: 52 SAAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLL 231
++ K IL +LQGCN L+RL KIHAHVIT GLQ PAIS+KLL+FCA+SVSG L+YAQLL
Sbjct: 4 NSKTKAILSLLQGCNGLKRLKKIHAHVITIGLQPDPAISNKLLNFCAVSVSGSLAYAQLL 63
Query: 232 F-HRLQNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFVLKACERV 408
F H LQNP TQDWNS+IRGFS+SPSPL AIFYYN M+S+ SDS PDTFTFSFVLKACE++
Sbjct: 64 FYHHLQNPQTQDWNSLIRGFSNSPSPLHAIFYYNLMLSSGSDSSPDTFTFSFVLKACEKL 123
Query: 409 KAQ 417
KA+
Sbjct: 124 KAR 126
>ref|XP_009366008.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Pyrus x bretschneideri]
Length = 587
Score = 182 bits (463), Expect = 7e-44
Identities = 92/130 (70%), Positives = 108/130 (83%), Gaps = 1/130 (0%)
Frame = +1
Query: 31 LCIVGQTSAAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGC 210
+C + +T K I +LQGCNSL+RL KIHAHVIT GLQ PAIS+KLL+FCA+SVSG
Sbjct: 1 MCQISKT----KAIRSLLQGCNSLKRLKKIHAHVITNGLQPDPAISNKLLNFCAVSVSGS 56
Query: 211 LSYAQLLF-HRLQNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFV 387
L+YAQLLF H LQNP TQDWNS+IRGFS+SPSP AIFYYN M+S+ SDS PDTFTFSFV
Sbjct: 57 LAYAQLLFYHHLQNPQTQDWNSLIRGFSNSPSPHHAIFYYNRMLSSGSDSPPDTFTFSFV 116
Query: 388 LKACERVKAQ 417
LKACE++KA+
Sbjct: 117 LKACEKLKAR 126
>ref|XP_010094922.1| hypothetical protein L484_022672 [Morus notabilis]
gi|587868198|gb|EXB57565.1| hypothetical protein
L484_022672 [Morus notabilis]
Length = 584
Score = 177 bits (450), Expect = 2e-42
Identities = 93/141 (65%), Positives = 108/141 (76%), Gaps = 4/141 (2%)
Frame = +1
Query: 7 SMQSPEPLLCIVGQTSAAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHF 186
S+QSPE S+ AK IL++LQGCNSL++L KIHA VIT GLQHHPAIS+KLLHF
Sbjct: 5 SLQSPE---------SSKAKTILKLLQGCNSLKKLRKIHAFVITNGLQHHPAISTKLLHF 55
Query: 187 CAISVSGCLSYAQLLF-HRLQNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAAS---D 354
CA+SVSG L YA LLF H + NP T DWNSIIRGFS SP+PL AIFYYN MV AA D
Sbjct: 56 CAVSVSGSLPYAVLLFRHHILNPQTDDWNSIIRGFSQSPNPLKAIFYYNDMVLAADKNFD 115
Query: 355 SRPDTFTFSFVLKACERVKAQ 417
RPD++TFSF+L+A ER KA+
Sbjct: 116 CRPDSYTFSFLLRASERTKAE 136
>ref|XP_004304919.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Fragaria vesca subsp. vesca]
Length = 589
Score = 166 bits (419), Expect = 8e-39
Identities = 83/123 (67%), Positives = 98/123 (79%), Gaps = 1/123 (0%)
Frame = +1
Query: 52 SAAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLL 231
++ +K IL +LQGCNSL++L KIHA+VIT GL HHP IS KLL+FCA+SVSG L YAQLL
Sbjct: 9 ASKSKAILTLLQGCNSLRKLSKIHAYVITNGLHHHPDISGKLLNFCAVSVSGSLPYAQLL 68
Query: 232 F-HRLQNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFVLKACERV 408
F H +QNP TQ WNS+IRGFS SPSPL AI YYN M+S +S PDTF+FSFVLKACER
Sbjct: 69 FHHHIQNPETQHWNSMIRGFSQSPSPLQAISYYNLMLSYSS---PDTFSFSFVLKACERA 125
Query: 409 KAQ 417
+
Sbjct: 126 NVE 128
>ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 165 bits (417), Expect = 1e-38
Identities = 79/123 (64%), Positives = 100/123 (81%), Gaps = 2/123 (1%)
Frame = +1
Query: 55 AAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLLF 234
A A+ IL +LQGCNS+++LHKIHAH++ G QH+P+IS KLL+FCA+SVSG L+YAQL+F
Sbjct: 21 ANARAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVF 80
Query: 235 HRLQNPLTQDWNSIIRGFSDSPSP--LSAIFYYNAMVSAASDSRPDTFTFSFVLKACERV 408
HR+ NP T WNS+IRGFS SPSP L AI +YN M+S AS +RPDT+TFSF+LKACE
Sbjct: 81 HRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLS-ASHARPDTYTFSFLLKACEEA 139
Query: 409 KAQ 417
K +
Sbjct: 140 KEE 142
>emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 165 bits (417), Expect = 1e-38
Identities = 79/123 (64%), Positives = 100/123 (81%), Gaps = 2/123 (1%)
Frame = +1
Query: 55 AAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLLF 234
A A+ IL +LQGCNS+++LHKIHAH++ G QH+P+IS KLL+FCA+SVSG L+YAQL+F
Sbjct: 3 ANARAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVF 62
Query: 235 HRLQNPLTQDWNSIIRGFSDSPSP--LSAIFYYNAMVSAASDSRPDTFTFSFVLKACERV 408
HR+ NP T WNS+IRGFS SPSP L AI +YN M+S AS +RPDT+TFSF+LKACE
Sbjct: 63 HRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLS-ASHARPDTYTFSFLLKACEEA 121
Query: 409 KAQ 417
K +
Sbjct: 122 KEE 124
>gb|KGN61250.1| hypothetical protein Csa_2G074120 [Cucumis sativus]
Length = 622
Score = 164 bits (415), Expect = 2e-38
Identities = 81/118 (68%), Positives = 97/118 (82%)
Frame = +1
Query: 64 KVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLLFHRL 243
K IL +LQGCNSL+RL KIHAHVI +GL HH I++KLL+FCAISVSG L+YAQLLFH++
Sbjct: 5 KAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQM 64
Query: 244 QNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFVLKACERVKAQ 417
+ P T+ WNSIIRGF+ S SP+ AI +YN MV S S PDTFTFSFVLKACER+KA+
Sbjct: 65 ECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMV-CDSFSIPDTFTFSFVLKACERIKAE 121
>ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Cucumis sativus] gi|778667845|ref|XP_011648994.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g56550 [Cucumis sativus]
Length = 579
Score = 164 bits (415), Expect = 2e-38
Identities = 81/118 (68%), Positives = 97/118 (82%)
Frame = +1
Query: 64 KVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLLFHRL 243
K IL +LQGCNSL+RL KIHAHVI +GL HH I++KLL+FCAISVSG L+YAQLLFH++
Sbjct: 5 KAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQM 64
Query: 244 QNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFVLKACERVKAQ 417
+ P T+ WNSIIRGF+ S SP+ AI +YN MV S S PDTFTFSFVLKACER+KA+
Sbjct: 65 ECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMV-CDSFSIPDTFTFSFVLKACERIKAE 121
>ref|XP_011041357.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Populus euphratica]
Length = 600
Score = 161 bits (408), Expect = 2e-37
Identities = 82/133 (61%), Positives = 98/133 (73%)
Frame = +1
Query: 16 SPEPLLCIVGQTSAAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAI 195
S PL ++ ++ A IL +LQGCN+L RL KI AHVI GLQ+HPAIS+ +L+FCA+
Sbjct: 10 SDNPLSNMMVLETSKANAILTVLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAV 69
Query: 196 SVSGCLSYAQLLFHRLQNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFT 375
S+SG L YAQ LF + NP TQ WNSIIRGF+ SPSPL AIFYYN M+ S PDTFT
Sbjct: 70 SISGSLPYAQHLFKHILNPQTQAWNSIIRGFAQSPSPLQAIFYYNRMLFYLV-SGPDTFT 128
Query: 376 FSFVLKACERVKA 414
FSF LKACER+KA
Sbjct: 129 FSFTLKACERIKA 141
>ref|XP_008441882.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Cucumis melo] gi|659082519|ref|XP_008441884.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g56550 [Cucumis melo]
gi|659082521|ref|XP_008441885.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g56550
[Cucumis melo] gi|659082523|ref|XP_008441886.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g56550 [Cucumis melo]
gi|659082525|ref|XP_008441887.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g56550
[Cucumis melo] gi|659082527|ref|XP_008441888.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g56550 [Cucumis melo]
gi|659082529|ref|XP_008441889.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g56550
[Cucumis melo] gi|659082531|ref|XP_008441890.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g56550 [Cucumis melo]
gi|659082533|ref|XP_008441891.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g56550
[Cucumis melo]
Length = 579
Score = 161 bits (408), Expect = 2e-37
Identities = 80/118 (67%), Positives = 96/118 (81%)
Frame = +1
Query: 64 KVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLLFHRL 243
K IL +LQGCNSL+RL KIHAHVI +GL HH AI++KLL+FCAISVSG L+YAQLLFH+
Sbjct: 5 KAILTLLQGCNSLKRLRKIHAHVIVSGLHHHVAIANKLLNFCAISVSGSLAYAQLLFHQT 64
Query: 244 QNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFVLKACERVKAQ 417
+ P T+ WNSIIRGF+ S SP+ AI +YN MV + R DTFTFSFVLKACER+KA+
Sbjct: 65 EFPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVWDSFSMR-DTFTFSFVLKACERIKAE 121
>ref|XP_002323212.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550320693|gb|EEF04973.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 584
Score = 160 bits (405), Expect = 3e-37
Identities = 79/121 (65%), Positives = 94/121 (77%)
Frame = +1
Query: 52 SAAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLL 231
++ A IL +LQGCN+L RL KI AHVI GLQ+HPAIS+ +L+FCA+S+SG L YAQ L
Sbjct: 6 TSKANAILTVLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHL 65
Query: 232 FHRLQNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFVLKACERVK 411
F + NP TQ WNSIIRGF+ SPSP+ AIFYYN M+ S S PDTFTFSF LKACER+K
Sbjct: 66 FRHILNPQTQAWNSIIRGFAQSPSPVQAIFYYNRML-FDSVSGPDTFTFSFTLKACERIK 124
Query: 412 A 414
A
Sbjct: 125 A 125
>ref|XP_010516263.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Camelina sativa]
Length = 582
Score = 151 bits (382), Expect = 2e-34
Identities = 76/123 (61%), Positives = 94/123 (76%), Gaps = 2/123 (1%)
Frame = +1
Query: 52 SAAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLL 231
S AKVI+R+LQGCNS+ +L KIH+HVI GLQHHP+I LL FCA+SV+G LSYA LL
Sbjct: 2 SEKAKVIVRMLQGCNSMNKLRKIHSHVIVNGLQHHPSIFDNLLRFCAVSVTGSLSYALLL 61
Query: 232 FHRL--QNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFVLKACER 405
F R +P T WNS+IRGFS S SPLS++ +YN M+ +S SRPD FTFSF LKACER
Sbjct: 62 FDRFDSSDPSTSAWNSLIRGFSVSSSPLSSLLFYNRMLH-SSVSRPDIFTFSFALKACER 120
Query: 406 VKA 414
+++
Sbjct: 121 LRS 123
>ref|XP_006402977.1| hypothetical protein EUTSA_v10005859mg [Eutrema salsugineum]
gi|557104076|gb|ESQ44430.1| hypothetical protein
EUTSA_v10005859mg [Eutrema salsugineum]
Length = 579
Score = 151 bits (381), Expect = 2e-34
Identities = 74/119 (62%), Positives = 95/119 (79%), Gaps = 1/119 (0%)
Frame = +1
Query: 61 AKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLLFHR 240
A+VI+R+LQGCNS+ +L KIH+HV+ GLQHHP+I + LL FCAISV+G LSYA LLFHR
Sbjct: 5 ARVIVRMLQGCNSMNKLRKIHSHVVINGLQHHPSIFNHLLRFCAISVTGSLSYALLLFHR 64
Query: 241 LQNPL-TQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFVLKACERVKA 414
+ L T WNS++RGFS S SPLS++ +YN M+ +S SRPD FTFSF LKACER+++
Sbjct: 65 FDSDLSTTAWNSLVRGFSVSSSPLSSLLFYNRML-LSSLSRPDIFTFSFALKACERLRS 122
>ref|NP_191214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180975|sp|Q9LXY5.1|PP284_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g56550 gi|7594533|emb|CAB88058.1| putative protein
[Arabidopsis thaliana] gi|91806586|gb|ABE66020.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|332646013|gb|AEE79534.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 151 bits (381), Expect = 2e-34
Identities = 73/119 (61%), Positives = 97/119 (81%), Gaps = 1/119 (0%)
Frame = +1
Query: 61 AKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLLF-H 237
A+VI+R+LQGCNS+++L KIH+HVI GLQHHP+I + LL FCA+SV+G LS+AQLLF H
Sbjct: 5 ARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDH 64
Query: 238 RLQNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFVLKACERVKA 414
+P T DWN +IRGFS+S SPL++I +YN M+ +S SRPD FTF+F LK+CER+K+
Sbjct: 65 FDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRML-LSSVSRPDLFTFNFALKSCERIKS 122
>ref|XP_010427484.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Camelina sativa]
gi|727502923|ref|XP_010427485.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g56550-like [Camelina sativa]
Length = 582
Score = 149 bits (376), Expect = 8e-34
Identities = 75/123 (60%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
Frame = +1
Query: 52 SAAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLL 231
S AKVI+R+LQGCNS+ +L KIH+HVI GLQHHP+I LL FCA+SV+G LSYA LL
Sbjct: 2 SEKAKVIVRMLQGCNSMNKLRKIHSHVIVNGLQHHPSIFDNLLRFCAVSVTGSLSYALLL 61
Query: 232 FHRL--QNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFVLKACER 405
F R +P T WNS+IRGFS S SPL ++ +YN M+ +S SRPDTFT SF LKACER
Sbjct: 62 FDRFDSSDPSTSAWNSLIRGFSISSSPLYSLLFYNRMLH-SSVSRPDTFTLSFALKACER 120
Query: 406 VKA 414
+++
Sbjct: 121 LRS 123
>ref|XP_010549168.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Tarenaya hassleriana]
Length = 581
Score = 149 bits (375), Expect = 1e-33
Identities = 74/121 (61%), Positives = 92/121 (76%)
Frame = +1
Query: 52 SAAAKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLL 231
S AK ILR+LQGCN + RL KIH HV GLQ+ P++ KLL+FCA+SVSG LSYA LL
Sbjct: 2 SEKAKAILRLLQGCNGMNRLRKIHTHVFINGLQNDPSLLDKLLNFCAVSVSGSLSYALLL 61
Query: 232 FHRLQNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFVLKACERVK 411
F+ +QNP TQ WNSIIRGF+ S SPLS++ +YN M+ +S S+PD FTF+F LKACE +
Sbjct: 62 FNGIQNPSTQAWNSIIRGFALSSSPLSSLLFYNRML-VSSISQPDIFTFTFALKACEILH 120
Query: 412 A 414
A
Sbjct: 121 A 121
>ref|XP_002878095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297323933|gb|EFH54354.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 651
Score = 148 bits (373), Expect = 2e-33
Identities = 74/118 (62%), Positives = 90/118 (76%), Gaps = 1/118 (0%)
Frame = +1
Query: 61 AKVILRILQGCNSLQRLHKIHAHVITTGLQHHPAISSKLLHFCAISVSGCLSYAQLLFHR 240
A+VI+R+LQGCNS+ +L KIH+HVI GL HHP+I + LL FCA+SV+G LSYAQLLF R
Sbjct: 5 ARVIVRMLQGCNSMNKLRKIHSHVIINGLHHHPSIFNHLLRFCAVSVNGSLSYAQLLFDR 64
Query: 241 L-QNPLTQDWNSIIRGFSDSPSPLSAIFYYNAMVSAASDSRPDTFTFSFVLKACERVK 411
+P T WN +IRGFS S SPL I YYN M+ +S SRPD FTFSF LKACER++
Sbjct: 65 FDSDPSTSAWNYLIRGFSISSSPLYTILYYNRML-LSSVSRPDIFTFSFALKACERIR 121