BLASTX nr result

ID: Ziziphus21_contig00037152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00037152
         (360 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008224655.1| PREDICTED: pentatricopeptide repeat-containi...    72   2e-10
ref|XP_010052500.1| PREDICTED: pentatricopeptide repeat-containi...    61   4e-07

>ref|XP_008224655.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Prunus mume]
          Length = 668

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 41/69 (59%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
 Frame = +2

Query: 158 GFVHRTLASCPFGTSAAPALFSDSE--SGGNDCYASGVIQDKDLLRKSYGGSGTGLHVLD 331
           G    +L++    TSA  A  +DSE  S G D YAS +IQDKDLLRKS   SGTGLHVLD
Sbjct: 23  GIQKLSLSAAQLRTSATRASCTDSEEISEGEDWYASHIIQDKDLLRKSLHNSGTGLHVLD 82

Query: 332 LIDRGSLEA 358
           L++RGSLEA
Sbjct: 83  LVNRGSLEA 91


>ref|XP_010052500.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial [Eucalyptus grandis]
          Length = 658

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
 Frame = +2

Query: 134 CSKVRDFGGFVH-RTLASCPFGTSAAPALFSD-----SESGGNDCYASGVIQDKDLLRKS 295
           C K+  F  +   R++ S P  +SAA A FSD     +ES  + C    +IQ KDLLR+S
Sbjct: 7   CRKIVSFDKYATARSVVSRPITSSAAHAAFSDPDAPEAESSDDPC----IIQTKDLLRRS 62

Query: 296 YGGSGTGLHVLDLIDRGSLE 355
              SGTGLHVLDL+DRG L+
Sbjct: 63  SNRSGTGLHVLDLLDRGLLQ 82


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