BLASTX nr result
ID: Ziziphus21_contig00036922
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00036922
(256 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEI27565.1| RNA polymerase beta subunit [Hovenia trichocarpa ... 179 5e-43
gb|ABV65718.1| RNA polymerase beta'' subunit, partial (chloropla... 177 4e-42
gb|AEI27568.1| RNA polymerase beta subunit [Rhamnus utilis] 176 5e-42
gb|AEI27553.1| RNA polymerase beta subunit [Barbeya oleoides] 176 5e-42
gb|AEI27558.1| RNA polymerase beta subunit [Dirachma socotrana] 176 6e-42
gb|AHE41666.1| RNA polymerase beta' subunit, partial (chloroplas... 175 1e-41
gb|AHE41660.1| RNA polymerase beta' subunit, partial (chloroplas... 175 1e-41
gb|AEI27563.1| RNA polymerase beta subunit [Gouania mauritiana] 175 1e-41
gb|ABV65775.1| RNA polymerase beta'' subunit, partial (chloropla... 175 1e-41
gb|ABV65752.1| RNA polymerase beta'' subunit, partial (chloropla... 175 1e-41
gb|ABV65760.1| RNA polymerase beta'' subunit, partial (chloropla... 175 1e-41
gb|ABV65733.1| RNA polymerase beta'' subunit, partial (chloropla... 174 2e-41
ref|YP_002720102.1| rpoC2 [Jatropha curcas] gi|224979555|gb|ACN7... 174 3e-41
ref|YP_008963681.1| RNA polymerase beta' subunit (chloroplast) [... 174 3e-41
gb|ABV65753.1| RNA polymerase beta'' subunit (chloroplast) [Liqu... 174 3e-41
ref|YP_009024671.1| RNA polymerase beta' subunit (chloroplast) [... 173 4e-41
ref|YP_009020028.1| RNA polymerase beta' subunit (plastid) [Prun... 173 4e-41
gb|AHE41658.1| RNA polymerase beta' subunit, partial (chloroplas... 173 4e-41
ref|YP_005090168.1| rpoC2 gene product (chloroplast) [Ricinus co... 173 4e-41
gb|AEI27566.1| RNA polymerase beta subunit [Neillia thibetica] 173 4e-41
>gb|AEI27565.1| RNA polymerase beta subunit [Hovenia trichocarpa var. robusta]
Length = 1254
Score = 179 bits (455), Expect = 5e-43
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 370 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 429
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSSVVPLSLHKDQ
Sbjct: 430 TSHLWILSGGSCRSSVVPLSLHKDQ 454
>gb|ABV65718.1| RNA polymerase beta'' subunit, partial (chloroplast) [Ceanothus
prostratus]
Length = 1281
Score = 177 bits (448), Expect = 4e-42
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 384 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 443
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSG SCRSSVVPLSLHKDQ
Sbjct: 444 TSHLWILSGDSCRSSVVPLSLHKDQ 468
>gb|AEI27568.1| RNA polymerase beta subunit [Rhamnus utilis]
Length = 1250
Score = 176 bits (447), Expect = 5e-42
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYT NFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 370 DQYVESEQVIAEIRAGTYTFNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 429
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSSVVP SLHKDQ
Sbjct: 430 TSHLWILSGGSCRSSVVPFSLHKDQ 454
>gb|AEI27553.1| RNA polymerase beta subunit [Barbeya oleoides]
Length = 1265
Score = 176 bits (447), Expect = 5e-42
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYT NFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 370 DQYVESEQVIAEIRAGTYTFNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 429
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSSVVP SLHKDQ
Sbjct: 430 TSHLWILSGGSCRSSVVPFSLHKDQ 454
>gb|AEI27558.1| RNA polymerase beta subunit [Dirachma socotrana]
Length = 1252
Score = 176 bits (446), Expect = 6e-42
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIR GTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 370 DQYVESEQVIAEIRGGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 429
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSS+VP SLHKDQ
Sbjct: 430 TSHLWILSGGSCRSSIVPFSLHKDQ 454
>gb|AHE41666.1| RNA polymerase beta' subunit, partial (chloroplast) [Rhodoleia
championii]
Length = 1375
Score = 175 bits (444), Expect = 1e-41
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYTLNFKE+VRKHIYSDSEGEMHWSTDVYHAPEFTY NVHLLPK
Sbjct: 401 DQYVESEQVIAEIRAGTYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYGNVHLLPK 460
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSSVVP SLHKDQ
Sbjct: 461 TSHLWILSGGSCRSSVVPFSLHKDQ 485
>gb|AHE41660.1| RNA polymerase beta' subunit, partial (chloroplast) [Exbucklandia
populnea]
Length = 1368
Score = 175 bits (444), Expect = 1e-41
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYTLNFKE+VRKHIYSDSEGEMHWSTDVYHAPEFTY NVHLLPK
Sbjct: 391 DQYVESEQVIAEIRAGTYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYGNVHLLPK 450
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSSVVP SLHKDQ
Sbjct: 451 TSHLWILSGGSCRSSVVPFSLHKDQ 475
>gb|AEI27563.1| RNA polymerase beta subunit [Gouania mauritiana]
Length = 1246
Score = 175 bits (444), Expect = 1e-41
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYT NFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 370 DQYVESEQVIAEIRAGTYTFNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 429
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSSVVP SLHKDQ
Sbjct: 430 TSHLWILSGGSCRSSVVPPSLHKDQ 454
>gb|ABV65775.1| RNA polymerase beta'' subunit, partial (chloroplast) [Spiraea
tomentosa]
Length = 1264
Score = 175 bits (444), Expect = 1e-41
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYTLNFKE+VRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 381 DQYVESEQVIAEIRAGTYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 440
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSS VP SLHKDQ
Sbjct: 441 TSHLWILSGGSCRSSAVPFSLHKDQ 465
>gb|ABV65752.1| RNA polymerase beta'' subunit, partial (chloroplast) [Leonia
glycycarpa]
Length = 1274
Score = 175 bits (444), Expect = 1e-41
Identities = 81/85 (95%), Positives = 84/85 (98%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYTLNF E+VRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 382 DQYVESEQVIAEIRAGTYTLNFTERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 441
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSS++PLSLHKDQ
Sbjct: 442 TSHLWILSGGSCRSSIIPLSLHKDQ 466
>gb|ABV65760.1| RNA polymerase beta'' subunit, partial (chloroplast) [Nitraria
retusa]
Length = 1272
Score = 175 bits (443), Expect = 1e-41
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 370 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 429
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSSVV SLHKDQ
Sbjct: 430 TSHLWILSGGSCRSSVVSFSLHKDQ 454
>gb|ABV65733.1| RNA polymerase beta'' subunit, partial (chloroplast) [Eucryphia
lucida]
Length = 1280
Score = 174 bits (441), Expect = 2e-41
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYT NFKE+VRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 384 DQYVESEQVIAEIRAGTYTFNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 443
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWIL+GGSCRSSVVP SLHKDQ
Sbjct: 444 TSHLWILAGGSCRSSVVPFSLHKDQ 468
>ref|YP_002720102.1| rpoC2 [Jatropha curcas] gi|224979555|gb|ACN72682.1| rpoC2 [Jatropha
curcas]
Length = 1394
Score = 174 bits (440), Expect = 3e-41
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWS+DVYHAPEFTYSNVHLLPK
Sbjct: 415 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSSDVYHAPEFTYSNVHLLPK 474
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSG SCRSS+VP SLHKDQ
Sbjct: 475 TSHLWILSGSSCRSSIVPFSLHKDQ 499
>ref|YP_008963681.1| RNA polymerase beta' subunit (chloroplast) [Liquidambar formosana]
gi|491650361|gb|AGL13421.1| RNA polymerase beta' subunit
(chloroplast) [Liquidambar formosana]
Length = 1390
Score = 174 bits (440), Expect = 3e-41
Identities = 81/85 (95%), Positives = 82/85 (96%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYT NFKE+VRKHIYSDSEGEMHWSTDVYHAPEFTY NVHLLPK
Sbjct: 415 DQYVESEQVIAEIRAGTYTFNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYGNVHLLPK 474
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSSVVP SLHKDQ
Sbjct: 475 TSHLWILSGGSCRSSVVPFSLHKDQ 499
>gb|ABV65753.1| RNA polymerase beta'' subunit (chloroplast) [Liquidambar
styraciflua]
Length = 1390
Score = 174 bits (440), Expect = 3e-41
Identities = 81/85 (95%), Positives = 82/85 (96%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAGTYT NFKE+VRKHIYSDSEGEMHWSTDVYHAPEFTY NVHLLPK
Sbjct: 415 DQYVESEQVIAEIRAGTYTFNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYGNVHLLPK 474
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSSVVP SLHKDQ
Sbjct: 475 TSHLWILSGGSCRSSVVPFSLHKDQ 499
>ref|YP_009024671.1| RNA polymerase beta' subunit (chloroplast) [Prunus kansuensis]
gi|597569096|gb|AHN13527.1| RNA polymerase beta' subunit
(chloroplast) [Prunus kansuensis]
Length = 1368
Score = 173 bits (439), Expect = 4e-41
Identities = 81/85 (95%), Positives = 82/85 (96%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAG YTLNFKE+VRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 411 DQYVESEQVIAEIRAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 470
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSS VP SLHKDQ
Sbjct: 471 TSHLWILSGGSCRSSAVPFSLHKDQ 495
>ref|YP_009020028.1| RNA polymerase beta' subunit (plastid) [Prunus mume]
gi|589061043|gb|AHK26864.1| RNA polymerase beta' subunit
(plastid) [Prunus mume]
Length = 1368
Score = 173 bits (439), Expect = 4e-41
Identities = 81/85 (95%), Positives = 82/85 (96%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAG YTLNFKE+VRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 411 DQYVESEQVIAEIRAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 470
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSS VP SLHKDQ
Sbjct: 471 TSHLWILSGGSCRSSAVPFSLHKDQ 495
>gb|AHE41658.1| RNA polymerase beta' subunit, partial (chloroplast) [Cercidiphyllum
japonicum]
Length = 1372
Score = 173 bits (439), Expect = 4e-41
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQY+ESEQVIAEIRAGTYT NFKE+VRKHIYSDSEGEMHWSTDVYHAPEFTY NVHLLPK
Sbjct: 397 DQYIESEQVIAEIRAGTYTFNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYGNVHLLPK 456
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSSVVP SLHKDQ
Sbjct: 457 TSHLWILSGGSCRSSVVPFSLHKDQ 481
>ref|YP_005090168.1| rpoC2 gene product (chloroplast) [Ricinus communis]
gi|339516155|gb|AEJ82545.1| RNA polymerase beta subunit
[Ricinus communis]
Length = 1405
Score = 173 bits (439), Expect = 4e-41
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
+QYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 415 NQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 474
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSG SCRSS+VP SLHKDQ
Sbjct: 475 TSHLWILSGNSCRSSIVPFSLHKDQ 499
>gb|AEI27566.1| RNA polymerase beta subunit [Neillia thibetica]
Length = 1258
Score = 173 bits (439), Expect = 4e-41
Identities = 81/85 (95%), Positives = 82/85 (96%)
Frame = -1
Query: 256 DQYVESEQVIAEIRAGTYTLNFKEKVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 77
DQYVESEQVIAEIRAG YTLNFKE+VRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK
Sbjct: 370 DQYVESEQVIAEIRAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPK 429
Query: 76 TSHLWILSGGSCRSSVVPLSLHKDQ 2
TSHLWILSGGSCRSS VP SLHKDQ
Sbjct: 430 TSHLWILSGGSCRSSAVPFSLHKDQ 454