BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00035433
         (369 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arbor...   123   6e-26
gb|KJB65617.1| hypothetical protein B456_010G103500 [Gossypium r...   120   4e-25
ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-...   120   4e-25
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The...   115   2e-23
ref|XP_012450467.1| PREDICTED: RNA polymerase sigma factor sigC-...   114   4e-23
ref|XP_012450466.1| PREDICTED: RNA polymerase sigma factor sigC-...   114   4e-23
ref|XP_012450464.1| PREDICTED: RNA polymerase sigma factor sigC-...   114   4e-23
ref|XP_012450463.1| PREDICTED: RNA polymerase sigma factor sigC-...   114   4e-23
ref|XP_012450461.1| PREDICTED: RNA polymerase sigma factor sigC-...   114   4e-23
ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ...   113   6e-23
gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]      113   6e-23
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC ...   112   1e-22
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun...   111   2e-22
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   110   3e-22
ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-...   110   4e-22
ref|XP_009361496.1| PREDICTED: RNA polymerase sigma factor sigC-...   108   1e-21
ref|XP_009361495.1| PREDICTED: RNA polymerase sigma factor sigC-...   108   1e-21
ref|XP_009370150.1| PREDICTED: RNA polymerase sigma factor sigC-...   108   2e-21
ref|XP_009370149.1| PREDICTED: RNA polymerase sigma factor sigC-...   108   2e-21
ref|XP_009367413.1| PREDICTED: RNA polymerase sigma factor sigC-...   108   2e-21

>gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 556

 Score =  123 bits (308), Expect = 6e-26
 Identities = 56/76 (73%), Positives = 69/76 (90%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           IR +LE++ GR+V+LSCWAEAAK+ EK+LQQHLH+GW C DELIRSTRSLVLYFARNYRG
Sbjct: 280 IRATLEEETGRIVSLSCWAEAAKLTEKVLQQHLHYGWYCRDELIRSTRSLVLYFARNYRG 339

Query: 320 VGISLKDLLQAGSVSV 367
           +GI+ +DL+QAGS+ V
Sbjct: 340 LGIAHEDLIQAGSIGV 355


>gb|KJB65617.1| hypothetical protein B456_010G103500 [Gossypium raimondii]
          Length = 458

 Score =  120 bits (301), Expect = 4e-25
 Identities = 55/76 (72%), Positives = 68/76 (89%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           IR +LE++ GR+V+LSCWAEAAK+ EK LQQHLH+GW C DELIR+TRSLVLYFARNYRG
Sbjct: 182 IRTTLEEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELIRTTRSLVLYFARNYRG 241

Query: 320 VGISLKDLLQAGSVSV 367
           +GI+ +DL+QAGS+ V
Sbjct: 242 LGIAHEDLIQAGSIGV 257


>ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X4
           [Gossypium raimondii] gi|763798660|gb|KJB65615.1|
           hypothetical protein B456_010G103500 [Gossypium
           raimondii]
          Length = 565

 Score =  120 bits (301), Expect = 4e-25
 Identities = 55/76 (72%), Positives = 68/76 (89%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           IR +LE++ GR+V+LSCWAEAAK+ EK LQQHLH+GW C DELIR+TRSLVLYFARNYRG
Sbjct: 289 IRTTLEEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELIRTTRSLVLYFARNYRG 348

Query: 320 VGISLKDLLQAGSVSV 367
           +GI+ +DL+QAGS+ V
Sbjct: 349 LGIAHEDLIQAGSIGV 364


>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
           gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
           C, putative [Theobroma cacao]
          Length = 848

 Score =  115 bits (287), Expect = 2e-23
 Identities = 53/76 (69%), Positives = 65/76 (85%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           IR +LE++ GR  +LSCWAEAA + EK+LQQHL FGW C DEL+RSTRSLVLYFARNYRG
Sbjct: 572 IRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRG 631

Query: 320 VGISLKDLLQAGSVSV 367
           +GI+ +DL+QAGS+ V
Sbjct: 632 LGIAHEDLIQAGSLGV 647


>ref|XP_012450467.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X6
           [Gossypium raimondii]
          Length = 471

 Score =  114 bits (284), Expect = 4e-23
 Identities = 52/71 (73%), Positives = 64/71 (90%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           IR +LE++ GR+V+LSCWAEAAK+ EK LQQHLH+GW C DELIR+TRSLVLYFARNYRG
Sbjct: 182 IRTTLEEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELIRTTRSLVLYFARNYRG 241

Query: 320 VGISLKDLLQA 352
           +GI+ +DL+QA
Sbjct: 242 LGIAHEDLIQA 252


>ref|XP_012450466.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X5
           [Gossypium raimondii]
          Length = 547

 Score =  114 bits (284), Expect = 4e-23
 Identities = 52/71 (73%), Positives = 64/71 (90%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           IR +LE++ GR+V+LSCWAEAAK+ EK LQQHLH+GW C DELIR+TRSLVLYFARNYRG
Sbjct: 258 IRTTLEEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELIRTTRSLVLYFARNYRG 317

Query: 320 VGISLKDLLQA 352
           +GI+ +DL+QA
Sbjct: 318 LGIAHEDLIQA 328


>ref|XP_012450464.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X3
           [Gossypium raimondii]
          Length = 576

 Score =  114 bits (284), Expect = 4e-23
 Identities = 52/71 (73%), Positives = 64/71 (90%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           IR +LE++ GR+V+LSCWAEAAK+ EK LQQHLH+GW C DELIR+TRSLVLYFARNYRG
Sbjct: 287 IRTTLEEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELIRTTRSLVLYFARNYRG 346

Query: 320 VGISLKDLLQA 352
           +GI+ +DL+QA
Sbjct: 347 LGIAHEDLIQA 357


>ref|XP_012450463.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
           [Gossypium raimondii]
          Length = 577

 Score =  114 bits (284), Expect = 4e-23
 Identities = 52/71 (73%), Positives = 64/71 (90%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           IR +LE++ GR+V+LSCWAEAAK+ EK LQQHLH+GW C DELIR+TRSLVLYFARNYRG
Sbjct: 288 IRTTLEEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELIRTTRSLVLYFARNYRG 347

Query: 320 VGISLKDLLQA 352
           +GI+ +DL+QA
Sbjct: 348 LGIAHEDLIQA 358


>ref|XP_012450461.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1
           [Gossypium raimondii] gi|823235651|ref|XP_012450462.1|
           PREDICTED: RNA polymerase sigma factor sigC-like isoform
           X1 [Gossypium raimondii] gi|763798661|gb|KJB65616.1|
           hypothetical protein B456_010G103500 [Gossypium
           raimondii]
          Length = 578

 Score =  114 bits (284), Expect = 4e-23
 Identities = 52/71 (73%), Positives = 64/71 (90%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           IR +LE++ GR+V+LSCWAEAAK+ EK LQQHLH+GW C DELIR+TRSLVLYFARNYRG
Sbjct: 289 IRTTLEEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELIRTTRSLVLYFARNYRG 348

Query: 320 VGISLKDLLQA 352
           +GI+ +DL+QA
Sbjct: 349 LGIAHEDLIQA 359


>ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
          Length = 606

 Score =  113 bits (282), Expect = 6e-23
 Identities = 52/76 (68%), Positives = 66/76 (86%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           IR +LE++ GR V+LSCWAEAA ++ K+LQQ LHFGW C DEL+RSTRSLVL+ ARNYRG
Sbjct: 330 IRTTLEQETGRAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDELVRSTRSLVLFLARNYRG 389

Query: 320 VGISLKDLLQAGSVSV 367
           +GI+L+DLLQAG++ V
Sbjct: 390 MGIALEDLLQAGNMGV 405


>gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]
          Length = 564

 Score =  113 bits (282), Expect = 6e-23
 Identities = 52/76 (68%), Positives = 66/76 (86%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           IR +LE++ GR V+LSCWAEAA ++ K+LQQ LHFGW C DEL+RSTRSLVL+ ARNYRG
Sbjct: 288 IRTTLEQETGRAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDELVRSTRSLVLFLARNYRG 347

Query: 320 VGISLKDLLQAGSVSV 367
           +GI+L+DLLQAG++ V
Sbjct: 348 MGIALEDLLQAGNMGV 363


>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC [Fragaria vesca subsp.
           vesca]
          Length = 545

 Score =  112 bits (280), Expect = 1e-22
 Identities = 50/76 (65%), Positives = 65/76 (85%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           ++ +LEK+ G+V TL CWAEAA ++EK+LQQ LHFGW C DEL+RSTRSLVLY ARNYRG
Sbjct: 268 LKVTLEKETGKVPTLRCWAEAAGVDEKVLQQQLHFGWYCQDELVRSTRSLVLYLARNYRG 327

Query: 320 VGISLKDLLQAGSVSV 367
           +G++L DLLQAG++ +
Sbjct: 328 LGVALDDLLQAGNLGL 343


>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
           gi|462419859|gb|EMJ24122.1| hypothetical protein
           PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  111 bits (277), Expect = 2e-22
 Identities = 50/76 (65%), Positives = 64/76 (84%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           I+++LEK+ G+V TL CWAEAA + EK+L QHL FGW C DELIRSTRSLVLY ARNYRG
Sbjct: 279 IKETLEKETGKVATLRCWAEAAGVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRG 338

Query: 320 VGISLKDLLQAGSVSV 367
           +G++L DL+QAG++ +
Sbjct: 339 LGVALDDLMQAGNLGL 354


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 560

 Score =  110 bits (276), Expect = 3e-22
 Identities = 53/76 (69%), Positives = 65/76 (85%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           IR +LE++  RVV+LSCWAEAA ++ K+LQQ L FGW C DELI+STRSLVLYFARNYRG
Sbjct: 284 IRTTLEEETERVVSLSCWAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRG 343

Query: 320 VGISLKDLLQAGSVSV 367
            GI+L+DLLQAG++ V
Sbjct: 344 TGIALEDLLQAGNLGV 359


>ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-like [Prunus mume]
          Length = 553

 Score =  110 bits (275), Expect = 4e-22
 Identities = 49/76 (64%), Positives = 65/76 (85%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           I+++LEK+ G+VVTL CWAEAA + E++L QHL FGW C DEL+RSTRSLVLY ARNYRG
Sbjct: 277 IKETLEKETGKVVTLRCWAEAAGVHERVLLQHLRFGWYCQDELMRSTRSLVLYLARNYRG 336

Query: 320 VGISLKDLLQAGSVSV 367
           +G++L DL+QAG++ +
Sbjct: 337 LGVALDDLIQAGNLGL 352


>ref|XP_009361496.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2 [Pyrus
           x bretschneideri]
          Length = 469

 Score =  108 bits (271), Expect = 1e-21
 Identities = 49/76 (64%), Positives = 64/76 (84%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           ++ +LEK+ G V TLSCWAEAA ++EK+L Q LHFGW C DELIRSTRSLVLY AR+YRG
Sbjct: 282 VKATLEKETGTVATLSCWAEAAGVDEKVLLQKLHFGWHCQDELIRSTRSLVLYLARSYRG 341

Query: 320 VGISLKDLLQAGSVSV 367
           +G+++ DLLQAG++ +
Sbjct: 342 LGVAMDDLLQAGNLGL 357


>ref|XP_009361495.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1 [Pyrus
           x bretschneideri]
          Length = 558

 Score =  108 bits (271), Expect = 1e-21
 Identities = 49/76 (64%), Positives = 64/76 (84%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           ++ +LEK+ G V TLSCWAEAA ++EK+L Q LHFGW C DELIRSTRSLVLY AR+YRG
Sbjct: 282 VKATLEKETGTVATLSCWAEAAGVDEKVLLQKLHFGWHCQDELIRSTRSLVLYLARSYRG 341

Query: 320 VGISLKDLLQAGSVSV 367
           +G+++ DLLQAG++ +
Sbjct: 342 LGVAMDDLLQAGNLGL 357


>ref|XP_009370150.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2 [Pyrus
           x bretschneideri]
          Length = 469

 Score =  108 bits (270), Expect = 2e-21
 Identities = 49/76 (64%), Positives = 63/76 (82%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           ++ +LEK+ G V TLSCWAEAA + EK+L Q LHFGW C DELIRSTRSLVLY AR+YRG
Sbjct: 282 VKATLEKETGTVATLSCWAEAAGVHEKVLLQKLHFGWYCQDELIRSTRSLVLYLARSYRG 341

Query: 320 VGISLKDLLQAGSVSV 367
           +G+++ DLLQAG++ +
Sbjct: 342 LGVAMDDLLQAGNLGL 357


>ref|XP_009370149.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1 [Pyrus
           x bretschneideri]
          Length = 558

 Score =  108 bits (270), Expect = 2e-21
 Identities = 49/76 (64%), Positives = 63/76 (82%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           ++ +LEK+ G V TLSCWAEAA + EK+L Q LHFGW C DELIRSTRSLVLY AR+YRG
Sbjct: 282 VKATLEKETGTVATLSCWAEAAGVHEKVLLQKLHFGWYCQDELIRSTRSLVLYLARSYRG 341

Query: 320 VGISLKDLLQAGSVSV 367
           +G+++ DLLQAG++ +
Sbjct: 342 LGVAMDDLLQAGNLGL 357


>ref|XP_009367413.1| PREDICTED: RNA polymerase sigma factor sigC-like [Pyrus x
           bretschneideri]
          Length = 556

 Score =  108 bits (269), Expect = 2e-21
 Identities = 50/73 (68%), Positives = 61/73 (83%)
 Frame = +2

Query: 140 IRKSLEKDIGRVVTLSCWAEAAKIEEKLLQQHLHFGWCCLDELIRSTRSLVLYFARNYRG 319
           I+ +LEK+ G V TLSCWAEAA + EK+L Q LHFGW C DELIRSTRSLVLY AR+YRG
Sbjct: 280 IKATLEKETGTVATLSCWAEAAGVREKVLLQKLHFGWYCQDELIRSTRSLVLYLARSYRG 339

Query: 320 VGISLKDLLQAGS 358
           +G+++ DLLQAG+
Sbjct: 340 LGVAMDDLLQAGN 352