BLASTX nr result
ID: Ziziphus21_contig00035226
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00035226
(259 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_004891591.1| rpoC1 gene product (chloroplast) [Nicotiana ... 165 1e-38
gb|AGF30207.1| RNA polymerase beta' subunit, partial (chloroplas... 164 2e-38
gb|AGE83470.1| RNA polymerase beta' subunit, partial (chloroplas... 164 2e-38
gb|AGM97760.1| RNA polymerase beta subunit, partial (chloroplast... 164 3e-38
emb|CAP62489.1| RNA polymerase beta' subunit-1 [Ceratophyllum de... 164 3e-38
gb|ABW40754.1| RNA polymerase beta subunit [Papaver somniferum] 164 3e-38
ref|YP_001542438.1| RNA polymerase beta subunit [Ceratophyllum d... 164 3e-38
gb|ABU79904.1| RNA polymerase C, partial (chloroplast) [Papaver ... 164 3e-38
gb|ALN11594.1| RNA polymerase beta (chloroplast) [Scutellaria in... 163 5e-38
gb|ALB78339.1| RNA polymerase beta (chloroplast) [Heuchera parvi... 163 5e-38
gb|ALD50352.1| RpoC1 (chloroplast) [Capsicum baccatum var. bacca... 163 5e-38
gb|AKZ29737.1| RNA polymerase beta (chloroplast) [Panax quinquef... 163 5e-38
gb|AKZ23897.1| RNA polymerase beta subunit (plastid) [Solanum ro... 163 5e-38
gb|AKZ23896.1| RNA polymerase beta subunit (plastid) [Solanum ca... 163 5e-38
gb|AKZ23893.1| RNA polymerase beta subunit (plastid) [Physalis h... 163 5e-38
gb|AKZ23891.1| RNA polymerase beta subunit (plastid) [Veronica a... 163 5e-38
ref|YP_009171859.1| RpoC1 (chloroplast) [Solanum nigrum] gi|8332... 163 5e-38
ref|YP_009162868.1| RNA polymerase beta' chain (chloroplast) [Rh... 163 5e-38
ref|NP_783223.2| RNA polymerase beta' subunit [Atropa belladonna... 163 5e-38
emb|CAC88035.1| RNA polymerase beta I subunit [Atropa belladonna] 163 5e-38
>ref|YP_004891591.1| rpoC1 gene product (chloroplast) [Nicotiana undulata]
gi|347453892|gb|AEO95550.1| RNA polymerase beta
(chloroplast) [Nicotiana undulata]
gi|347454003|gb|AEO95660.1| RNA polymerase beta
[synthetic construct]
Length = 691
Score = 165 bits (417), Expect = 1e-38
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 360 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 419
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQQLASNIGVAKSKIREKE
Sbjct: 420 VIRGLIRQQLASNIGVAKSKIREKE 444
>gb|AGF30207.1| RNA polymerase beta' subunit, partial (chloroplast) [Lamium
garganicum subsp. laevigatum]
gi|451041793|gb|AGF30209.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium garganicum subsp.
striatum]
Length = 234
Score = 164 bits (416), Expect = 2e-38
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 88 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 147
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 148 VIRGLIRQHLASNIGVAKSKIREKE 172
>gb|AGE83470.1| RNA polymerase beta' subunit, partial (chloroplast) [Lamium
galeobdolon subsp. galeobdolon]
gi|449076131|gb|AGE83471.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium galeobdolon
subsp. galeobdolon] gi|449076133|gb|AGE83472.1| RNA
polymerase beta' subunit, partial (chloroplast) [Lamium
galeobdolon subsp. argentatum]
gi|449076135|gb|AGE83473.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium galeobdolon
subsp. flavidum] gi|449076139|gb|AGE83475.1| RNA
polymerase beta' subunit, partial (chloroplast) [Lamium
album] gi|449076141|gb|AGE83476.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium album]
gi|449076143|gb|AGE83477.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium album]
gi|449076145|gb|AGE83478.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium amplexicaule]
gi|449076147|gb|AGE83479.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium amplexicaule]
gi|449076149|gb|AGE83480.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium amplexicaule]
gi|449076151|gb|AGE83481.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium amplexicaule]
gi|449076153|gb|AGE83482.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium incisum]
gi|449076155|gb|AGE83483.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium incisum]
gi|449076157|gb|AGE83484.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium incisum]
gi|449076159|gb|AGE83485.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium maculatum]
gi|449076161|gb|AGE83486.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium maculatum]
gi|449076163|gb|AGE83487.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium confertum]
gi|449076165|gb|AGE83488.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium confertum]
gi|449076167|gb|AGE83489.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium purpureum]
gi|449076169|gb|AGE83490.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium purpureum]
gi|449076171|gb|AGE83491.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium purpureum]
gi|449076173|gb|AGE83492.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium garganicum subsp.
garganicum] gi|449076175|gb|AGE83493.1| RNA polymerase
beta' subunit, partial (chloroplast) [Lamium garganicum
subsp. striatum] gi|449076179|gb|AGE83495.1| RNA
polymerase beta' subunit, partial (chloroplast) [Lamium
bifidum] gi|449076181|gb|AGE83496.1| RNA polymerase
beta' subunit, partial (chloroplast) [Lamium bifidum]
gi|451041749|gb|AGF30187.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium barbatum]
gi|451041751|gb|AGF30188.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium barbatum]
gi|451041753|gb|AGF30189.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium barbatum]
gi|451041755|gb|AGF30190.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium barbatum]
gi|451041757|gb|AGF30191.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium bifidum subsp.
balcanicum] gi|451041759|gb|AGF30192.1| RNA polymerase
beta' subunit, partial (chloroplast) [Lamium confertum]
gi|451041761|gb|AGF30193.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium confertum]
gi|451041763|gb|AGF30194.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium coutinhoi]
gi|451041765|gb|AGF30195.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium coutinhoi]
gi|451041767|gb|AGF30196.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium flexuosum]
gi|451041771|gb|AGF30198.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium galactophyllum]
gi|451041773|gb|AGF30199.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium galeobdolon
subsp. argentatum] gi|451041775|gb|AGF30200.1| RNA
polymerase beta' subunit, partial (chloroplast) [Lamium
galeobdolon subsp. argentatum]
gi|451041777|gb|AGF30201.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium galeobdolon
subsp. flavidum] gi|451041781|gb|AGF30203.1| RNA
polymerase beta' subunit, partial (chloroplast) [Lamium
galeobdolon subsp. montanum] gi|451041783|gb|AGF30204.1|
RNA polymerase beta' subunit, partial (chloroplast)
[Lamium galeobdolon subsp. montanum]
gi|451041785|gb|AGF30205.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium garganicum subsp.
corsicum] gi|451041787|gb|AGF30206.1| RNA polymerase
beta' subunit, partial (chloroplast) [Lamium garganicum
subsp. corsicum] gi|451041791|gb|AGF30208.1| RNA
polymerase beta' subunit, partial (chloroplast) [Lamium
garganicum subsp. laevigatum]
gi|451041795|gb|AGF30210.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium garganicum var.
armenum] gi|451041797|gb|AGF30211.1| RNA polymerase
beta' subunit, partial (chloroplast) [Lamium gevorense]
gi|451041799|gb|AGF30212.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium gevorense]
gi|451041801|gb|AGF30213.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium x holsaticum]
gi|451041803|gb|AGF30214.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium x holsaticum]
gi|451041805|gb|AGF30215.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium lycium]
gi|451041807|gb|AGF30216.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium lycium]
gi|451041809|gb|AGF30217.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium macrodon]
gi|451041811|gb|AGF30218.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium macrodon]
gi|451041813|gb|AGF30219.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium maculatum]
gi|451041815|gb|AGF30220.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium moschatum]
gi|451041817|gb|AGF30221.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium moschatum var.
rhodium] gi|451041819|gb|AGF30222.1| RNA polymerase
beta' subunit, partial (chloroplast) [Lamium tomentosum]
gi|451041821|gb|AGF30223.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium tomentosum]
gi|451041823|gb|AGF30224.1| RNA polymerase beta'
subunit, partial (chloroplast) [Lamium tomentosum]
gi|550600586|gb|AGX85149.1| RpoC1, partial (chloroplast)
[Lamium album] gi|550600588|gb|AGX85150.1| RpoC1,
partial (chloroplast) [Lamium barbatum]
gi|550600590|gb|AGX85151.1| RpoC1, partial (chloroplast)
[Lamium bifidum] gi|550600592|gb|AGX85152.1| RpoC1,
partial (chloroplast) [Lamium bifidum]
gi|550600594|gb|AGX85153.1| RpoC1, partial (chloroplast)
[Lamium confertum] gi|550600596|gb|AGX85154.1| RpoC1,
partial (chloroplast) [Lamium confertum]
gi|550600598|gb|AGX85155.1| RpoC1, partial (chloroplast)
[Lamium galeobdolon subsp. galeobdolon]
gi|550600600|gb|AGX85156.1| RpoC1, partial (chloroplast)
[Lamium garganicum subsp. laevigatum]
gi|550600602|gb|AGX85157.1| RpoC1, partial (chloroplast)
[Lamium incisum] gi|550600604|gb|AGX85158.1| RpoC1,
partial (chloroplast) [Lamium incisum]
gi|550600606|gb|AGX85159.1| RpoC1, partial (chloroplast)
[Lamium maculatum] gi|550600608|gb|AGX85160.1| RpoC1,
partial (chloroplast) [Lamium maculatum]
gi|550600610|gb|AGX85161.1| RpoC1, partial (chloroplast)
[Lamium maculatum] gi|550600612|gb|AGX85162.1| RpoC1,
partial (chloroplast) [Lamium moschatum]
Length = 234
Score = 164 bits (416), Expect = 2e-38
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 88 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 147
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 148 VIRGLIRQHLASNIGVAKSKIREKE 172
>gb|AGM97760.1| RNA polymerase beta subunit, partial (chloroplast) [Ceratophyllum
demersum]
Length = 164
Score = 164 bits (414), Expect = 3e-38
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 3 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 62
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQQ+ASNIG+AKSKIREKE
Sbjct: 63 VIRGLIRQQIASNIGIAKSKIREKE 87
>emb|CAP62489.1| RNA polymerase beta' subunit-1 [Ceratophyllum demersum]
Length = 680
Score = 164 bits (414), Expect = 3e-38
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 350 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 409
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQQ+ASNIG+AKSKIREKE
Sbjct: 410 VIRGLIRQQIASNIGIAKSKIREKE 434
>gb|ABW40754.1| RNA polymerase beta subunit [Papaver somniferum]
Length = 682
Score = 164 bits (414), Expect = 3e-38
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 350 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 409
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQQ+ASNIGVAKSKIREKE
Sbjct: 410 VIRGLIRQQVASNIGVAKSKIREKE 434
>ref|YP_001542438.1| RNA polymerase beta subunit [Ceratophyllum demersum]
gi|212288464|sp|A8SE82.1|RPOC1_CERDE RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gi|148508434|gb|ABQ81441.1| RNA polymerase beta subunit
(chloroplast) [Ceratophyllum demersum]
Length = 680
Score = 164 bits (414), Expect = 3e-38
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 350 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 409
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQQ+ASNIG+AKSKIREKE
Sbjct: 410 VIRGLIRQQIASNIGIAKSKIREKE 434
>gb|ABU79904.1| RNA polymerase C, partial (chloroplast) [Papaver bracteatum]
Length = 160
Score = 164 bits (414), Expect = 3e-38
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 13 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 72
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQQ+ASNIGVAKSKIREKE
Sbjct: 73 VIRGLIRQQVASNIGVAKSKIREKE 97
>gb|ALN11594.1| RNA polymerase beta (chloroplast) [Scutellaria insignis]
Length = 681
Score = 163 bits (412), Expect = 5e-38
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 351 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 410
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 411 VIRGLIRQHLASNIGVAKSKIREKE 435
>gb|ALB78339.1| RNA polymerase beta (chloroplast) [Heuchera parviflora var.
saurensis]
Length = 689
Score = 163 bits (412), Expect = 5e-38
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 357 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 416
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 417 VIRGLIRQHLASNIGVAKSKIREKE 441
>gb|ALD50352.1| RpoC1 (chloroplast) [Capsicum baccatum var. baccatum]
Length = 691
Score = 163 bits (412), Expect = 5e-38
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 360 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 419
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 420 VIRGLIRQHLASNIGVAKSKIREKE 444
>gb|AKZ29737.1| RNA polymerase beta (chloroplast) [Panax quinquefolius]
Length = 692
Score = 163 bits (412), Expect = 5e-38
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 360 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 419
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 420 VIRGLIRQHLASNIGVAKSKIREKE 444
>gb|AKZ23897.1| RNA polymerase beta subunit (plastid) [Solanum rostratum]
Length = 705
Score = 163 bits (412), Expect = 5e-38
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 357 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 416
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 417 VIRGLIRQHLASNIGVAKSKIREKE 441
>gb|AKZ23896.1| RNA polymerase beta subunit (plastid) [Solanum carolinense]
Length = 705
Score = 163 bits (412), Expect = 5e-38
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 357 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 416
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 417 VIRGLIRQHLASNIGVAKSKIREKE 441
>gb|AKZ23893.1| RNA polymerase beta subunit (plastid) [Physalis heterophylla]
gi|916442622|gb|AKZ23894.1| RNA polymerase beta subunit
(plastid) [Physalis virginiana]
Length = 688
Score = 163 bits (412), Expect = 5e-38
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 357 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 416
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 417 VIRGLIRQHLASNIGVAKSKIREKE 441
>gb|AKZ23891.1| RNA polymerase beta subunit (plastid) [Veronica americana]
Length = 691
Score = 163 bits (412), Expect = 5e-38
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 361 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 420
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 421 VIRGLIRQHLASNIGVAKSKIREKE 445
>ref|YP_009171859.1| RpoC1 (chloroplast) [Solanum nigrum] gi|833204738|gb|AKM21936.1|
RpoC1 (chloroplast) [Solanum nigrum]
gi|916442625|gb|AKZ23895.1| RNA polymerase beta subunit
(plastid) [Solanum triflorum]
gi|937501419|gb|ALI31131.1| RNA polymerase beta' subunit
1 (chloroplast) [Solanum nigrum]
Length = 688
Score = 163 bits (412), Expect = 5e-38
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 357 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 416
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 417 VIRGLIRQHLASNIGVAKSKIREKE 441
>ref|YP_009162868.1| RNA polymerase beta' chain (chloroplast) [Rheum palmatum]
gi|909719321|gb|AKT93616.1| RNA polymerase beta' chain
(chloroplast) [Rheum palmatum]
Length = 678
Score = 163 bits (412), Expect = 5e-38
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 350 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 409
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 410 VIRGLIRQDLASNIGVAKSKIREKE 434
>ref|NP_783223.2| RNA polymerase beta' subunit [Atropa belladonna]
gi|41018086|sp|Q8S8Y0.2|RPOC1_ATRBE RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
Length = 681
Score = 163 bits (412), Expect = 5e-38
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 350 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 409
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 410 VIRGLIRQHLASNIGVAKSKIREKE 434
>emb|CAC88035.1| RNA polymerase beta I subunit [Atropa belladonna]
Length = 688
Score = 163 bits (412), Expect = 5e-38
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = -3
Query: 257 NKAYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 78
NK YKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF
Sbjct: 357 NKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF 416
Query: 77 VIRGLIRQQLASNIGVAKSKIREKE 3
VIRGLIRQ LASNIGVAKSKIREKE
Sbjct: 417 VIRGLIRQHLASNIGVAKSKIREKE 441