BLASTX nr result

ID: Ziziphus21_contig00035189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00035189
         (225 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012853795.1| PREDICTED: uncharacterized protein LOC105973...    53   3e-06
ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein A...    57   5e-06
ref|XP_009116295.1| PREDICTED: putative ribonuclease H protein A...    57   5e-06
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    56   9e-06

>ref|XP_012853795.1| PREDICTED: uncharacterized protein LOC105973319 [Erythranthe
           guttatus]
          Length = 1280

 Score = 52.8 bits (125), Expect(2) = 3e-06
 Identities = 23/48 (47%), Positives = 33/48 (68%)
 Frame = -2

Query: 146 ISWLRMCRLKEMGVLGFQGFKDVNMALVAKLGWKIASEEDSLWIRLMK 3
           +SW R+C  K +G +GF+  K  N+AL+AK GW+I +  DSL  RL+K
Sbjct: 824 MSWNRLCEPKSLGGMGFRDLKSFNIALLAKQGWRILTNPDSLLSRLLK 871



 Score = 24.6 bits (52), Expect(2) = 3e-06
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 225 LLPNNVYEDLDACVRKFW 172
           +LP ++  D++A +R+FW
Sbjct: 795 VLPYSLIRDIEAAIRRFW 812


>ref|XP_009124282.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 1011

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 21/51 (41%), Positives = 38/51 (74%)
 Frame = -2

Query: 155 KRLISWLRMCRLKEMGVLGFQGFKDVNMALVAKLGWKIASEEDSLWIRLMK 3
           + L+SW ++C+ K  G LG +G +D+N AL+AK+GW++  + +SLW R+++
Sbjct: 475 QHLVSWEKICKPKAEGGLGIRGSRDMNKALIAKVGWRLLRDTESLWARVLR 525


>ref|XP_009116295.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 782

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 21/51 (41%), Positives = 38/51 (74%)
 Frame = -2

Query: 155 KRLISWLRMCRLKEMGVLGFQGFKDVNMALVAKLGWKIASEEDSLWIRLMK 3
           + L+SW ++C+ K  G LG +G +D+N AL+AK+GW++  + +SLW R+++
Sbjct: 246 QHLVSWEKICKPKAEGGLGIRGSRDMNKALIAKVGWRLLRDTESLWARVLR 296


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 22/51 (43%), Positives = 38/51 (74%)
 Frame = -2

Query: 155 KRLISWLRMCRLKEMGVLGFQGFKDVNMALVAKLGWKIASEEDSLWIRLMK 3
           + L+SW ++CR K  G LG +  KD+N AL+AK+GW++ +++ SLW R+++
Sbjct: 634 QHLLSWKKVCRPKAAGGLGLRASKDMNRALLAKVGWRLLNDKVSLWARVLR 684


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