BLASTX nr result

ID: Ziziphus21_contig00034723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00034723
         (288 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010107444.1| hypothetical protein L484_015785 [Morus nota...    83   9e-14
ref|XP_008234250.1| PREDICTED: pentatricopeptide repeat-containi...    69   1e-09
ref|XP_006421917.1| hypothetical protein CICLE_v10004849mg [Citr...    65   2e-08
ref|XP_009340019.1| PREDICTED: pentatricopeptide repeat-containi...    65   3e-08
ref|XP_008354224.1| PREDICTED: pentatricopeptide repeat-containi...    64   6e-08
ref|XP_002510791.1| pentatricopeptide repeat-containing protein,...    59   1e-06
ref|XP_011048717.1| PREDICTED: pentatricopeptide repeat-containi...    58   3e-06

>ref|XP_010107444.1| hypothetical protein L484_015785 [Morus notabilis]
           gi|587928796|gb|EXC15982.1| hypothetical protein
           L484_015785 [Morus notabilis]
          Length = 498

 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 46/104 (44%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
 Frame = +3

Query: 6   MNFASLSSPRLVRRFSLCFVAT-----------RKFCHGSLDGGKGHEGFQCIDEPMNTG 152
           MN  SLS+P LVRR S C +             R FC+ S DG  G  G+ C +EP+   
Sbjct: 1   MNVISLSAPSLVRRTSSCLIVVSKVTLSSLVVIRNFCNRSFDGVNGENGYDCFEEPLKRM 60

Query: 153 LKSSNFDSVMGERSDFYXXXXXXXXXFSLKWSFLESTRIDAKRV 284
            KSS FDS M E+SDFY         FS++ SF E+ RIDA RV
Sbjct: 61  WKSSYFDSDMDEQSDFYSREMPARGNFSVRQSFFETARIDAGRV 104


>ref|XP_008234250.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Prunus mume]
          Length = 487

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 35/93 (37%), Positives = 52/93 (55%)
 Frame = +3

Query: 6   MNFASLSSPRLVRRFSLCFVATRKFCHGSLDGGKGHEGFQCIDEPMNTGLKSSNFDSVMG 185
           MN  SL  PR++++ S  FV  RK   G   G KG  G + I+EP+    +SS+FDSV+ 
Sbjct: 1   MNCISLFGPRVIQKISCYFVVARKLSDGCFGGNKGDNGHEFIEEPLKRIWRSSDFDSVLD 60

Query: 186 ERSDFYXXXXXXXXXFSLKWSFLESTRIDAKRV 284
           E+ + +         FSL+ SF E+ +I  +RV
Sbjct: 61  EKQNVHEYENRPREYFSLRRSFFENAKIHTRRV 93


>ref|XP_006421917.1| hypothetical protein CICLE_v10004849mg [Citrus clementina]
           gi|568874561|ref|XP_006490383.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g55630-like [Citrus sinensis]
           gi|557523790|gb|ESR35157.1| hypothetical protein
           CICLE_v10004849mg [Citrus clementina]
          Length = 487

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 34/93 (36%), Positives = 48/93 (51%)
 Frame = +3

Query: 6   MNFASLSSPRLVRRFSLCFVATRKFCHGSLDGGKGHEGFQCIDEPMNTGLKSSNFDSVMG 185
           MN  +L   R+V +     V +RKFC  S DGGK   GF CI+E +    +SSNFD+ M 
Sbjct: 1   MNSVALFGSRIVNKVPFFLVLSRKFCDYSGDGGKTDNGFSCIEETLTDIWESSNFDATMN 60

Query: 186 ERSDFYXXXXXXXXXFSLKWSFLESTRIDAKRV 284
                +         FS++  FL++ + DA RV
Sbjct: 61  GNGGLHDYQRTAEAQFSIRRMFLDNVKFDASRV 93


>ref|XP_009340019.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Pyrus x bretschneideri]
          Length = 487

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 34/93 (36%), Positives = 48/93 (51%)
 Frame = +3

Query: 6   MNFASLSSPRLVRRFSLCFVATRKFCHGSLDGGKGHEGFQCIDEPMNTGLKSSNFDSVMG 185
           MN   L  PR++R+ S   V  RK   G   G KG  G++ ++E + T  KSS FDS + 
Sbjct: 1   MNCIYLFGPRVIRKISCYVVVVRKLSDGCFRGDKGDNGYEVVEETLKTMWKSSEFDSGLD 60

Query: 186 ERSDFYXXXXXXXXXFSLKWSFLESTRIDAKRV 284
           E+   Y         FSL+ +F E+ +ID  RV
Sbjct: 61  EKHGVYESENRPREHFSLQRNFFENAKIDTARV 93


>ref|XP_008354224.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Malus domestica]
          Length = 487

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 34/93 (36%), Positives = 48/93 (51%)
 Frame = +3

Query: 6   MNFASLSSPRLVRRFSLCFVATRKFCHGSLDGGKGHEGFQCIDEPMNTGLKSSNFDSVMG 185
           MN   L  PR++R+ S   V  RK   G   G KG  G++ ++E + T  KSS FDSV+ 
Sbjct: 1   MNCIYLFGPRVIRKISCYVVVVRKLSDGCFRGDKGDNGYEFVEETLKTMWKSSEFDSVLD 60

Query: 186 ERSDFYXXXXXXXXXFSLKWSFLESTRIDAKRV 284
           E+             FSL+ SF ++ +ID  RV
Sbjct: 61  EKHGVCESENRPREHFSLRRSFFKNAKIDTARV 93


>ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549906|gb|EEF51393.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 475

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 36/93 (38%), Positives = 48/93 (51%)
 Frame = +3

Query: 6   MNFASLSSPRLVRRFSLCFVATRKFCHGSLDGGKGHEGFQCIDEPMNTGLKSSNFDSVMG 185
           MN  +LS  R+V +FS   V +RK C  S DG K   GF+ I+EP+    K+S+F S   
Sbjct: 1   MNTIALSGTRMVHKFSYILVFSRKLCDCSFDGDKSDNGFRYIEEPLKRLWKNSDFGSCGS 60

Query: 186 ERSDFYXXXXXXXXXFSLKWSFLESTRIDAKRV 284
           E  D           +S +  F E+ RIDA RV
Sbjct: 61  ENRD--------NGNYSQRKWFFENVRIDAARV 85


>ref|XP_011048717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Populus euphratica]
          Length = 480

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = +3

Query: 6   MNFASLSSPRLVRRFSLCFVA-TRKFCHGSLDGGKGHE-GFQCIDEPMNTGLKSSNFDSV 179
           MN A+L   R+V +F LCF + +R+ C  S DGG  ++ GFQ ++EP+    K S+FDS 
Sbjct: 1   MNSAALFGMRVVHKF-LCFPSISRRLCDYSFDGGDNNDNGFQYVEEPLKRMYKCSDFDSF 59

Query: 180 MGERSDFYXXXXXXXXXFSLKWSFLESTRIDAKRV 284
             E              FS++ S++E TRIDA RV
Sbjct: 60  QSE-------SCVEEEHFSVRRSYVECTRIDADRV 87


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