BLASTX nr result
ID: Ziziphus21_contig00031643
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00031643
(1012 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007214631.1| hypothetical protein PRUPE_ppa002950mg [Prun... 563 e-157
ref|XP_008223803.1| PREDICTED: pentatricopeptide repeat-containi... 560 e-157
ref|XP_009345233.1| PREDICTED: pentatricopeptide repeat-containi... 555 e-155
ref|XP_008367262.1| PREDICTED: pentatricopeptide repeat-containi... 551 e-154
ref|XP_010110716.1| hypothetical protein L484_009204 [Morus nota... 551 e-154
ref|XP_011462354.1| PREDICTED: pentatricopeptide repeat-containi... 550 e-154
ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi... 545 e-152
ref|XP_009628569.1| PREDICTED: pentatricopeptide repeat-containi... 520 e-144
ref|XP_011042994.1| PREDICTED: pentatricopeptide repeat-containi... 516 e-143
ref|XP_009764015.1| PREDICTED: pentatricopeptide repeat-containi... 513 e-143
ref|XP_002318172.1| pentatricopeptide repeat-containing family p... 511 e-142
ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containi... 507 e-141
ref|XP_007014360.1| Pentatricopeptide repeat superfamily protein... 506 e-141
ref|XP_007014358.1| Pentatricopeptide repeat superfamily protein... 506 e-141
ref|XP_007014357.1| Pentatricopeptide repeat superfamily protein... 506 e-141
ref|XP_006474640.1| PREDICTED: pentatricopeptide repeat-containi... 505 e-140
ref|XP_006453289.1| hypothetical protein CICLE_v10010788mg, part... 505 e-140
ref|XP_006366836.1| PREDICTED: pentatricopeptide repeat-containi... 504 e-140
ref|XP_004242849.1| PREDICTED: pentatricopeptide repeat-containi... 503 e-140
ref|XP_012066813.1| PREDICTED: pentatricopeptide repeat-containi... 501 e-139
>ref|XP_007214631.1| hypothetical protein PRUPE_ppa002950mg [Prunus persica]
gi|462410496|gb|EMJ15830.1| hypothetical protein
PRUPE_ppa002950mg [Prunus persica]
Length = 619
Score = 563 bits (1450), Expect = e-157
Identities = 276/336 (82%), Positives = 306/336 (91%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
DA FEPDE SLVS+LGACGDLGDLS GR +E FVVENK+E+NS++GSALIGMYGKCGDL
Sbjct: 225 DAEFEPDEMSLVSILGACGDLGDLSLGRWVESFVVENKLELNSYVGSALIGMYGKCGDLS 284
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
SARRVFDSM +KDRVTWNAMITGYAQNGMSDEA++LFD MKE GV+ DKITLVG+LSACA
Sbjct: 285 SARRVFDSMKKKDRVTWNAMITGYAQNGMSDEAMVLFDDMKERGVNPDKITLVGMLSACA 344
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
SVGALD+G WID +AS+RG+Q D+YV TAL DMYAKCG L NALRVFEDMP KNEVSWNA
Sbjct: 345 SVGALDLGRWIDIYASERGIQQDIYVGTALIDMYAKCGSLANALRVFEDMPQKNEVSWNA 404
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSS 291
MISALAFHGRA EAISLFK M + GA RPNDITFVG+LSACVHVGLVDEGR+LFN MSS
Sbjct: 405 MISALAFHGRAHEAISLFKSMTEGAGATRPNDITFVGVLSACVHVGLVDEGRQLFNLMSS 464
Query: 290 TFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTE 111
+F LVPK+EHYSC+VDLL+RAGL+HEAWDFI+KMPEKPDEVVLGALL AC KC+NVDVT+
Sbjct: 465 SFGLVPKVEHYSCLVDLLSRAGLVHEAWDFIKKMPEKPDEVVLGALLGACKKCKNVDVTK 524
Query: 110 RVTQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
+V QLLLELEPSNSGNYVISSKIYANLK WD+SA+M
Sbjct: 525 QVVQLLLELEPSNSGNYVISSKIYANLKMWDESAKM 560
Score = 192 bits (489), Expect = 3e-46
Identities = 109/284 (38%), Positives = 174/284 (61%)
Frame = -3
Query: 995 PDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSARRV 816
P+ + V AC +L +L+ GR+ V + ++ + H+ +LI MY +CG L AR+V
Sbjct: 129 PNNFTYPFVFIACANLVELNHGRAAHSSVFKTGLDKDGHVTHSLITMYARCGKLGFARKV 188
Query: 815 FDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASVGAL 636
FD + ++D V+WN+MI+GY++ G + EA+ LF M++A + D+++LV +L AC +G L
Sbjct: 189 FDEICQRDLVSWNSMISGYSKMGYAGEAVRLFQEMRDAEFEPDEMSLVSILGACGDLGDL 248
Query: 635 DVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMISAL 456
+G W++ F + L+ + YV +AL MY KCG L +A RVF+ M K+ V+WNAMI+
Sbjct: 249 SLGRWVESFVVENKLELNSYVGSALIGMYGKCGDLSSARRVFDSMKKKDRVTWNAMITGY 308
Query: 455 AFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTFRLV 276
A +G + EA+ LF M KE G P+ IT VG+LSAC VG +D GR + + +S +
Sbjct: 309 AQNGMSDEAMVLFDDM-KERG-VNPDKITLVGMLSACASVGALDLGRWI-DIYASERGIQ 365
Query: 275 PKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
I + ++D+ A+ G + A E MP+K +EV A+++A
Sbjct: 366 QDIYVGTALIDMYAKCGSLANALRVFEDMPQK-NEVSWNAMISA 408
Score = 83.2 bits (204), Expect = 3e-13
Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 40/304 (13%)
Frame = -3
Query: 908 VENKMEINS-HLGSALIGMYGKCGDLLSARRVFDSMNRKDRVTWNAMITGYAQNGMSDEA 732
+ +M INS H + L+ D A +F + + +N MI G +
Sbjct: 55 IHTQMLINSIHKPNFLLPKIVDLKDFSYASMLFSHIPEPNDYAFNIMIRGLTTTWHKYQL 114
Query: 731 IMLFD-GMKEAGVDIDKITLVGVLSACASVGALDVGIWIDKFASQRGLQHDVYVATALTD 555
+ F MK + + T V ACA++ L+ G + GL D +V +L
Sbjct: 115 TLEFYYQMKSLCLMPNNFTYPFVFIACANLVELNHGRAAHSSVFKTGLDKDGHVTHSLIT 174
Query: 554 MYAKCGCLDNALRVFEDMPLKNEVSWNAMISALAFHGRAMEAISLFKRMIKEDGAARPND 375
MYA+CG L A +VF+++ ++ VSWN+MIS + G A EA+ LF+ M D P++
Sbjct: 175 MYARCGKLGFARKVFDEICQRDLVSWNSMISGYSKMGYAGEAVRLFQEM--RDAEFEPDE 232
Query: 374 ITFVGLLSACVHVGLVDEG-----------------------------------RRLFNS 300
++ V +L AC +G + G RR+F+S
Sbjct: 233 MSLVSILGACGDLGDLSLGRWVESFVVENKLELNSYVGSALIGMYGKCGDLSSARRVFDS 292
Query: 299 MSSTFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEK---PDEVVLGALLAACHKCR 129
M R+ ++ M+ A+ G+ EA + M E+ PD++ L +L+AC
Sbjct: 293 MKKKDRVT-----WNAMITGYAQNGMSDEAMVLFDDMKERGVNPDKITLVGMLSACASVG 347
Query: 128 NVDV 117
+D+
Sbjct: 348 ALDL 351
>ref|XP_008223803.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Prunus mume]
Length = 620
Score = 560 bits (1443), Expect = e-157
Identities = 273/336 (81%), Positives = 304/336 (90%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
D GFEPDE SLVS+LGACGDLGDLS GR +E FVVENK+E+NS++GSALIGMYGKCGDL
Sbjct: 226 DEGFEPDEMSLVSILGACGDLGDLSLGRWVESFVVENKLELNSYVGSALIGMYGKCGDLS 285
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
SARRVFDSM +KDRVTWNAMITGYAQNGMSDEA++LFD MKE GV+ DKITLVG+LSACA
Sbjct: 286 SARRVFDSMKKKDRVTWNAMITGYAQNGMSDEAMVLFDDMKERGVNPDKITLVGMLSACA 345
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
S+GALD+G WID +AS+RG+Q D+YV TAL DMYAKCG L NALRVFEDMP KNEVSWN
Sbjct: 346 SIGALDLGRWIDIYASERGIQQDIYVGTALIDMYAKCGSLANALRVFEDMPQKNEVSWNT 405
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSS 291
MISALAFHGRA EAISLFK M + GA RPNDITFVG+LSACVHVGLVDEGR+LFN M S
Sbjct: 406 MISALAFHGRAHEAISLFKSMTEGAGATRPNDITFVGVLSACVHVGLVDEGRQLFNLMRS 465
Query: 290 TFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTE 111
+F LVPK+EHYSC+VDLL+RAGL+HEAWDFI+KMPEKPDEVVLGALL AC KC+NVDVT+
Sbjct: 466 SFGLVPKVEHYSCLVDLLSRAGLVHEAWDFIKKMPEKPDEVVLGALLGACKKCKNVDVTK 525
Query: 110 RVTQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
+V QLLLELEPSNSGNYVISSKIYANLK WD+SA+M
Sbjct: 526 QVVQLLLELEPSNSGNYVISSKIYANLKMWDESAKM 561
Score = 191 bits (484), Expect = 1e-45
Identities = 106/284 (37%), Positives = 173/284 (60%)
Frame = -3
Query: 995 PDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSARRV 816
P+ + V AC +L +L+ GR+ V + ++ + H+ +LI MY +CG L AR+V
Sbjct: 130 PNNFTYPFVFIACANLVELNHGRAAHSSVFKTGLDKDGHVTHSLITMYARCGKLGFARKV 189
Query: 815 FDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASVGAL 636
FD + ++D V+WN+MI+GY++ G + +A+ LF M++ G + D+++LV +L AC +G L
Sbjct: 190 FDEICQRDLVSWNSMISGYSKMGYAGDAVRLFQEMRDEGFEPDEMSLVSILGACGDLGDL 249
Query: 635 DVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMISAL 456
+G W++ F + L+ + YV +AL MY KCG L +A RVF+ M K+ V+WNAMI+
Sbjct: 250 SLGRWVESFVVENKLELNSYVGSALIGMYGKCGDLSSARRVFDSMKKKDRVTWNAMITGY 309
Query: 455 AFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTFRLV 276
A +G + EA+ LF M KE G P+ IT VG+LSAC +G +D GR + + +S +
Sbjct: 310 AQNGMSDEAMVLFDDM-KERG-VNPDKITLVGMLSACASIGALDLGRWI-DIYASERGIQ 366
Query: 275 PKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
I + ++D+ A+ G + A E MP+K +EV +++A
Sbjct: 367 QDIYVGTALIDMYAKCGSLANALRVFEDMPQK-NEVSWNTMISA 409
Score = 80.9 bits (198), Expect = 2e-12
Identities = 78/304 (25%), Positives = 131/304 (43%), Gaps = 40/304 (13%)
Frame = -3
Query: 908 VENKMEINS-HLGSALIGMYGKCGDLLSARRVFDSMNRKDRVTWNAMITGYAQNGMSDEA 732
+ +M INS H + L+ D A +F + + +N MI G +
Sbjct: 56 IHTQMLINSIHKPNFLLPKIIDHKDFSYASMLFSHIPEPNDYAFNVMIRGLTTTWHKYQL 115
Query: 731 IMLFD-GMKEAGVDIDKITLVGVLSACASVGALDVGIWIDKFASQRGLQHDVYVATALTD 555
+ F MK + + T V ACA++ L+ G + GL D +V +L
Sbjct: 116 TLEFYYQMKSLCLMPNNFTYPFVFIACANLVELNHGRAAHSSVFKTGLDKDGHVTHSLIT 175
Query: 554 MYAKCGCLDNALRVFEDMPLKNEVSWNAMISALAFHGRAMEAISLFKRMIKEDGAARPND 375
MYA+CG L A +VF+++ ++ VSWN+MIS + G A +A+ LF+ M D P++
Sbjct: 176 MYARCGKLGFARKVFDEICQRDLVSWNSMISGYSKMGYAGDAVRLFQEM--RDEGFEPDE 233
Query: 374 ITFVGLLSACVHVGLVDEG-----------------------------------RRLFNS 300
++ V +L AC +G + G RR+F+S
Sbjct: 234 MSLVSILGACGDLGDLSLGRWVESFVVENKLELNSYVGSALIGMYGKCGDLSSARRVFDS 293
Query: 299 MSSTFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEK---PDEVVLGALLAACHKCR 129
M R+ ++ M+ A+ G+ EA + M E+ PD++ L +L+AC
Sbjct: 294 MKKKDRVT-----WNAMITGYAQNGMSDEAMVLFDDMKERGVNPDKITLVGMLSACASIG 348
Query: 128 NVDV 117
+D+
Sbjct: 349 ALDL 352
>ref|XP_009345233.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Pyrus x bretschneideri]
Length = 619
Score = 555 bits (1429), Expect = e-155
Identities = 268/334 (80%), Positives = 306/334 (91%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
GFEPDE +LV+VLGACGDLGDLS G+ +E FV+ENK+E+N+++GSALIGMYGKCGDL SA
Sbjct: 227 GFEPDERTLVTVLGACGDLGDLSLGKWVEGFVIENKLEMNTYVGSALIGMYGKCGDLSSA 286
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
RRVFDSM +KDR+TWNAMI+GYAQNGMSDEA++LFDGMKEAGV+ DKITLVGVLSACAS+
Sbjct: 287 RRVFDSMKKKDRITWNAMISGYAQNGMSDEAMVLFDGMKEAGVNPDKITLVGVLSACASI 346
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
GAL++G WID +A++RGLQHD+YV TAL DMYAKCG L ALRVFEDMP KNEVSWNAMI
Sbjct: 347 GALELGKWIDTYATERGLQHDIYVGTALIDMYAKCGSLATALRVFEDMPQKNEVSWNAMI 406
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
SALAFHGRA EAISLFKRM + + RPNDITFVGLLSACVH GLV++GR+LFN MSS+F
Sbjct: 407 SALAFHGRAHEAISLFKRMTEGCASVRPNDITFVGLLSACVHAGLVNKGRQLFNLMSSSF 466
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTERV 105
LVPKIEHYSCMVDLL+RAGL+HEAWDFI+KMPEKPD+VVLGALL AC KC+NVDV+E+V
Sbjct: 467 GLVPKIEHYSCMVDLLSRAGLVHEAWDFIQKMPEKPDQVVLGALLGACRKCKNVDVSEQV 526
Query: 104 TQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
QLLLELEP+NSGNYVISSKIYANL+ WDDSARM
Sbjct: 527 LQLLLELEPANSGNYVISSKIYANLEMWDDSARM 560
Score = 190 bits (482), Expect = 2e-45
Identities = 105/284 (36%), Positives = 171/284 (60%)
Frame = -3
Query: 995 PDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSARRV 816
P+ + V AC +L +L+ GR+ V + +E + H+ +LI MY +CG+L AR V
Sbjct: 129 PNNFTYPFVFIACANLLELNHGRAAHSSVFKTGLEKDGHVSHSLITMYARCGELGFARNV 188
Query: 815 FDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASVGAL 636
FD ++ +D V+WN+MI+GY + G + +A+ LF M+ G + D+ TLV VL AC +G L
Sbjct: 189 FDEISERDLVSWNSMISGYCKMGCAGDAVRLFCEMRTDGFEPDERTLVTVLGACGDLGDL 248
Query: 635 DVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMISAL 456
+G W++ F + L+ + YV +AL MY KCG L +A RVF+ M K+ ++WNAMIS
Sbjct: 249 SLGKWVEGFVIENKLEMNTYVGSALIGMYGKCGDLSSARRVFDSMKKKDRITWNAMISGY 308
Query: 455 AFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTFRLV 276
A +G + EA+ LF M ++ P+ IT VG+LSAC +G ++ G+ + ++ ++ L
Sbjct: 309 AQNGMSDEAMVLFDGM--KEAGVNPDKITLVGVLSACASIGALELGKWI-DTYATERGLQ 365
Query: 275 PKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
I + ++D+ A+ G + A E MP+K +EV A+++A
Sbjct: 366 HDIYVGTALIDMYAKCGSLATALRVFEDMPQK-NEVSWNAMISA 408
Score = 119 bits (297), Expect = 5e-24
Identities = 69/188 (36%), Positives = 110/188 (58%), Gaps = 4/188 (2%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
+AG PD+ +LV VL AC +G L G+ ++ + E ++ + ++G+ALI MY KCG L
Sbjct: 326 EAGVNPDKITLVGVLSACASIGALELGKWIDTYATERGLQHDIYVGTALIDMYAKCGSLA 385
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKE--AGVDIDKITLVGVLSA 657
+A RVF+ M +K+ V+WNAMI+ A +G + EAI LF M E A V + IT VG+LSA
Sbjct: 386 TALRVFEDMPQKNEVSWNAMISALAFHGRAHEAISLFKRMTEGCASVRPNDITFVGLLSA 445
Query: 656 CASVGALDVGIWI-DKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLK-NEV 483
C G ++ G + + +S GL + + + D+ ++ G + A + MP K ++V
Sbjct: 446 CVHAGLVNKGRQLFNLMSSSFGLVPKIEHYSCMVDLLSRAGLVHEAWDFIQKMPEKPDQV 505
Query: 482 SWNAMISA 459
A++ A
Sbjct: 506 VLGALLGA 513
Score = 75.9 bits (185), Expect = 5e-11
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Frame = -3
Query: 839 DLLSARRVFDSMNRKDRVTWNAMITGYAQNGMSDE-AIMLFDGMKEAGVDIDKITLVGVL 663
D A +F + + +N MI G + I + MK + + T V
Sbjct: 79 DFTYASLLFSHIPEPNDYAFNVMIRGLTTTWQKYQLTIEFYYQMKSLYLMPNNFTYPFVF 138
Query: 662 SACASVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEV 483
ACA++ L+ G + GL+ D +V+ +L MYA+CG L A VF+++ ++ V
Sbjct: 139 IACANLLELNHGRAAHSSVFKTGLEKDGHVSHSLITMYARCGELGFARNVFDEISERDLV 198
Query: 482 SWNAMISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEG----- 318
SWN+MIS G A +A+ LF M + DG P++ T V +L AC +G + G
Sbjct: 199 SWNSMISGYCKMGCAGDAVRLFCEM-RTDG-FEPDERTLVTVLGACGDLGDLSLGKWVEG 256
Query: 317 ------------------------------RRLFNSMSSTFRLVPKIEHYSCMVDLLARA 228
RR+F+SM R+ ++ M+ A+
Sbjct: 257 FVIENKLEMNTYVGSALIGMYGKCGDLSSARRVFDSMKKKDRIT-----WNAMISGYAQN 311
Query: 227 GLIHEAWDFIEKMPE---KPDEVVLGALLAAC 141
G+ EA + M E PD++ L +L+AC
Sbjct: 312 GMSDEAMVLFDGMKEAGVNPDKITLVGVLSAC 343
>ref|XP_008367262.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400-like
[Malus domestica]
Length = 619
Score = 551 bits (1421), Expect = e-154
Identities = 267/334 (79%), Positives = 304/334 (91%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
GFEPDE +LV+VLGACGDLGDLS G+ +E FVVENK+E+N+++GSALIGMYGKCGDL SA
Sbjct: 227 GFEPDERTLVTVLGACGDLGDLSLGKWVEGFVVENKLEMNTYVGSALIGMYGKCGDLSSA 286
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
RRVFDSM +KD +TWNAMI+GYAQNGMSDEA++LFDGMKEAGV+ DKITLVGVLSACAS+
Sbjct: 287 RRVFDSMKKKDLITWNAMISGYAQNGMSDEAMVLFDGMKEAGVNPDKITLVGVLSACASI 346
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
GAL++G WID +A++RGLQH++YV TAL DMYAKCG L ALRVFEDMP KNEVSWNAMI
Sbjct: 347 GALELGKWIDTYATERGLQHEIYVGTALIDMYAKCGSLATALRVFEDMPQKNEVSWNAMI 406
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
SALAFHGRA EAISLFKRM + + RPNDITFVGLLSACVH GLVD+GR+LFN MSS+F
Sbjct: 407 SALAFHGRAHEAISLFKRMTEGSASVRPNDITFVGLLSACVHAGLVDKGRQLFNLMSSSF 466
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTERV 105
LVPKIEHYSCMVDLL+RAGL+HEAWDFI+KMPEKPD+VVLGALL AC KC+NVDV+E+V
Sbjct: 467 GLVPKIEHYSCMVDLLSRAGLVHEAWDFIQKMPEKPDQVVLGALLGACRKCKNVDVSEQV 526
Query: 104 TQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
QLLLELEP+NSGNYVISSKIYAN + WDDSARM
Sbjct: 527 LQLLLELEPANSGNYVISSKIYANSEMWDDSARM 560
Score = 188 bits (477), Expect = 7e-45
Identities = 103/284 (36%), Positives = 172/284 (60%)
Frame = -3
Query: 995 PDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSARRV 816
P+ + V AC +L +L+ GR+ V + ++ + H+ +LI MY +CG+L AR+V
Sbjct: 129 PNNFTYPFVFIACANLLELNHGRAAHSSVFKTGLDKDGHVSHSLITMYARCGELGFARKV 188
Query: 815 FDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASVGAL 636
FD ++ +D V+WN+MI+GY + G + +A+ F M+ G + D+ TLV VL AC +G L
Sbjct: 189 FDEISERDLVSWNSMISGYCKMGCAGDAVQFFCEMRTDGFEPDERTLVTVLGACGDLGDL 248
Query: 635 DVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMISAL 456
+G W++ F + L+ + YV +AL MY KCG L +A RVF+ M K+ ++WNAMIS
Sbjct: 249 SLGKWVEGFVVENKLEMNTYVGSALIGMYGKCGDLSSARRVFDSMKKKDLITWNAMISGY 308
Query: 455 AFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTFRLV 276
A +G + EA+ LF M ++ P+ IT VG+LSAC +G ++ G+ + ++ ++ L
Sbjct: 309 AQNGMSDEAMVLFDGM--KEAGVNPDKITLVGVLSACASIGALELGKWI-DTYATERGLQ 365
Query: 275 PKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
+I + ++D+ A+ G + A E MP+K +EV A+++A
Sbjct: 366 HEIYVGTALIDMYAKCGSLATALRVFEDMPQK-NEVSWNAMISA 408
Score = 120 bits (301), Expect = 2e-24
Identities = 70/188 (37%), Positives = 109/188 (57%), Gaps = 4/188 (2%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
+AG PD+ +LV VL AC +G L G+ ++ + E ++ ++G+ALI MY KCG L
Sbjct: 326 EAGVNPDKITLVGVLSACASIGALELGKWIDTYATERGLQHEIYVGTALIDMYAKCGSLA 385
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKE--AGVDIDKITLVGVLSA 657
+A RVF+ M +K+ V+WNAMI+ A +G + EAI LF M E A V + IT VG+LSA
Sbjct: 386 TALRVFEDMPQKNEVSWNAMISALAFHGRAHEAISLFKRMTEGSASVRPNDITFVGLLSA 445
Query: 656 CASVGALDVGIWI-DKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLK-NEV 483
C G +D G + + +S GL + + + D+ ++ G + A + MP K ++V
Sbjct: 446 CVHAGLVDKGRQLFNLMSSSFGLVPKIEHYSCMVDLLSRAGLVHEAWDFIQKMPEKPDQV 505
Query: 482 SWNAMISA 459
A++ A
Sbjct: 506 VLGALLGA 513
Score = 72.0 bits (175), Expect = 7e-10
Identities = 71/272 (26%), Positives = 115/272 (42%), Gaps = 39/272 (14%)
Frame = -3
Query: 839 DLLSARRVFDSMNRKDRVTWNAMITGYAQNGMSDE-AIMLFDGMKEAGVDIDKITLVGVL 663
D A +F + + +N MI G + I + MK + + T V
Sbjct: 79 DFTYASLLFSHIPEPNDYAFNVMIRGLTTTWQKYQLTIEFYYQMKSLYLMPNNFTYPFVF 138
Query: 662 SACASVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEV 483
ACA++ L+ G + GL D +V+ +L MYA+CG L A +VF+++ ++ V
Sbjct: 139 IACANLLELNHGRAAHSSVFKTGLDKDGHVSHSLITMYARCGELGFARKVFDEISERDLV 198
Query: 482 SWNAMISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEG----- 318
SWN+MIS G A +A+ F M + DG P++ T V +L AC +G + G
Sbjct: 199 SWNSMISGYCKMGCAGDAVQFFCEM-RTDG-FEPDERTLVTVLGACGDLGDLSLGKWVEG 256
Query: 317 ------------------------------RRLFNSMSSTFRLVPKIEHYSCMVDLLARA 228
RR+F+SM + ++ M+ A+
Sbjct: 257 FVVENKLEMNTYVGSALIGMYGKCGDLSSARRVFDSMKKKDLIT-----WNAMISGYAQN 311
Query: 227 GLIHEAWDFIEKMPE---KPDEVVLGALLAAC 141
G+ EA + M E PD++ L +L+AC
Sbjct: 312 GMSDEAMVLFDGMKEAGVNPDKITLVGVLSAC 343
>ref|XP_010110716.1| hypothetical protein L484_009204 [Morus notabilis]
gi|587941305|gb|EXC27881.1| hypothetical protein
L484_009204 [Morus notabilis]
Length = 619
Score = 551 bits (1419), Expect = e-154
Identities = 275/337 (81%), Positives = 300/337 (89%), Gaps = 1/337 (0%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
D G P E +LVSVLGACGDLGDLS GR +EEFVVE +E+NS+LGSALIGMYGKCGDL
Sbjct: 167 DDGIAPVEMTLVSVLGACGDLGDLSLGRWVEEFVVEKSLEVNSYLGSALIGMYGKCGDLC 226
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
SARRVFDSM +KD VTWNAMI+GYAQNG+SDEAI LF MKEAG++ +KITLVGVLSACA
Sbjct: 227 SARRVFDSMTKKDLVTWNAMISGYAQNGLSDEAIRLFGDMKEAGINPNKITLVGVLSACA 286
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
VGALD+G W+D FA + GLQHDVYVATAL DMYAKCG LD+ALRVFE+MP KNEVSWNA
Sbjct: 287 QVGALDMGKWVDNFALESGLQHDVYVATALLDMYAKCGSLDDALRVFEEMPQKNEVSWNA 346
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGA-ARPNDITFVGLLSACVHVGLVDEGRRLFNSMS 294
MISALAFHGRA+EAISLF RMI+E GA ARPNDITFVG+LSACVH GLVDEGRRLFNS+S
Sbjct: 347 MISALAFHGRAIEAISLFNRMIEEGGALARPNDITFVGVLSACVHAGLVDEGRRLFNSVS 406
Query: 293 STFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVT 114
S+F L PKIEHYSCMVDLLARAG +HEAW+FIEKMPEKPDEV LGALLAAC KCRN DVT
Sbjct: 407 SSFGLAPKIEHYSCMVDLLARAGHVHEAWNFIEKMPEKPDEVSLGALLAACQKCRNEDVT 466
Query: 113 ERVTQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
+RVTQLLLELEPSNSGNYVISSK+Y LK WDDSARM
Sbjct: 467 KRVTQLLLELEPSNSGNYVISSKVYKKLKMWDDSARM 503
Score = 190 bits (483), Expect = 1e-45
Identities = 106/277 (38%), Positives = 170/277 (61%), Gaps = 4/277 (1%)
Frame = -3
Query: 962 ACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSARRVFDSMNRKDRVT 783
AC +L L+ GR+ V + ++ + H+ ++LI MY +CG+L AR VFD + + +
Sbjct: 82 ACANLSTLNHGRTAHSSVFKIGLDGDEHVSNSLITMYARCGELGCAREVFDEITLRGLSS 141
Query: 782 WNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASVGALDVGIWIDKFAS 603
WN+MI+GY++ G + EA+ LF M++ G+ ++TLV VL AC +G L +G W+++F
Sbjct: 142 WNSMISGYSKMGYAREAVELFGEMRDDGIAPVEMTLVSVLGACGDLGDLSLGRWVEEFVV 201
Query: 602 QRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMISALAFHGRAMEAIS 423
++ L+ + Y+ +AL MY KCG L +A RVF+ M K+ V+WNAMIS A +G + EAI
Sbjct: 202 EKSLEVNSYLGSALIGMYGKCGDLCSARRVFDSMTKKDLVTWNAMISGYAQNGLSDEAIR 261
Query: 422 LFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTFRLVPKIEH----YS 255
LF M ++ PN IT VG+LSAC VG +D G+ + N F L ++H +
Sbjct: 262 LFGDM--KEAGINPNKITLVGVLSACAQVGALDMGKWVDN-----FALESGLQHDVYVAT 314
Query: 254 CMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
++D+ A+ G + +A E+MP+K +EV A+++A
Sbjct: 315 ALLDMYAKCGSLDDALRVFEEMPQK-NEVSWNAMISA 350
Score = 84.7 bits (208), Expect = 1e-13
Identities = 85/316 (26%), Positives = 136/316 (43%), Gaps = 41/316 (12%)
Frame = -3
Query: 827 ARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFD-GMKEAGVDIDKITLVGVLSACA 651
A +F + + +N MI G + F MK + +K T V ACA
Sbjct: 25 ASALFAHIPEPNDYAFNVMIRGLTTTWQKYGLALEFHCQMKGLSLKTNKFTYPFVFIACA 84
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
++ L+ G + GL D +V+ +L MYA+CG L A VF+++ L+ SWN+
Sbjct: 85 NLSTLNHGRTAHSSVFKIGLDGDEHVSNSLITMYARCGELGCAREVFDEITLRGLSSWNS 144
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEG--------- 318
MIS + G A EA+ LF M ++DG A P ++T V +L AC +G + G
Sbjct: 145 MISGYSKMGYAREAVELFGEM-RDDGIA-PVEMTLVSVLGACGDLGDLSLGRWVEEFVVE 202
Query: 317 --------------------------RRLFNSMSSTFRLVPKIEHYSCMVDLLARAGLIH 216
RR+F+SM+ + ++ M+ A+ GL
Sbjct: 203 KSLEVNSYLGSALIGMYGKCGDLCSARRVFDSMTK-----KDLVTWNAMISGYAQNGLSD 257
Query: 215 EAWDFIEKMPE---KPDEVVLGALLAACHKCRNVDVTERVTQLLLELEPSNSGNYVISS- 48
EA M E P+++ L +L+AC + +D+ + V LE YV ++
Sbjct: 258 EAIRLFGDMKEAGINPNKITLVGVLSACAQVGALDMGKWVDNFALE-SGLQHDVYVATAL 316
Query: 47 -KIYANLKKWDDSARM 3
+YA DD+ R+
Sbjct: 317 LDMYAKCGSLDDALRV 332
>ref|XP_011462354.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Fragaria vesca subsp. vesca]
Length = 632
Score = 550 bits (1418), Expect = e-154
Identities = 266/336 (79%), Positives = 301/336 (89%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
+AGFEP+E +LVSVLGACGDLGD+ G+ +E+FVVE K+E+NS+LGSALIGM+GKCGDL
Sbjct: 238 EAGFEPNEMTLVSVLGACGDLGDVGLGQWVEDFVVEKKLELNSYLGSALIGMFGKCGDLC 297
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
SARRVFDSM +KDRVTWNAMITGYAQNGMSDEA++LFDGMKEAGV DKITLVG+LSACA
Sbjct: 298 SARRVFDSMKKKDRVTWNAMITGYAQNGMSDEAMVLFDGMKEAGVIPDKITLVGMLSACA 357
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
++GALD+G WIDK+AS+R QHD+YVATAL DMYAKCG L NALRVFEDMP KNEV+WNA
Sbjct: 358 AIGALDMGKWIDKYASERDFQHDIYVATALVDMYAKCGSLANALRVFEDMPQKNEVTWNA 417
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSS 291
MISALAFHGRA EAISLF+RM E G ARPNDITFV +LSACVHVGLVDEGRRLF+ MSS
Sbjct: 418 MISALAFHGRACEAISLFERMTVEAGTARPNDITFVAVLSACVHVGLVDEGRRLFDLMSS 477
Query: 290 TFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTE 111
+F L+PK+EHYSCM DLL+RAG +HEAWD ++KMPEKPDEV LGALL+AC KC NVDVTE
Sbjct: 478 SFGLIPKVEHYSCMADLLSRAGRVHEAWDLVKKMPEKPDEVTLGALLSACRKCGNVDVTE 537
Query: 110 RVTQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
+V QLLLELEPSNSGNY+ISS IY LK WDDSARM
Sbjct: 538 QVVQLLLELEPSNSGNYIISSNIYKGLKMWDDSARM 573
Score = 193 bits (490), Expect = 2e-46
Identities = 111/305 (36%), Positives = 180/305 (59%), Gaps = 4/305 (1%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
G PD + + AC +L ++ GR+ VV+ + H+ ++I MY CG+L A
Sbjct: 139 GLSPDNFTFPFLFIACWNLSEIRHGRAGHSSVVKTGFGSDGHVCHSMITMYSMCGELGCA 198
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
R+VFD + ++D V+WN+MI+GY + G + +A+ LF M+EAG + +++TLV VL AC +
Sbjct: 199 RKVFDEIPQRDSVSWNSMISGYGKMGRAQDAVGLFGEMREAGFEPNEMTLVSVLGACGDL 258
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
G + +G W++ F ++ L+ + Y+ +AL M+ KCG L +A RVF+ M K+ V+WNAMI
Sbjct: 259 GDVGLGQWVEDFVVEKKLELNSYLGSALIGMFGKCGDLCSARRVFDSMKKKDRVTWNAMI 318
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
+ A +G + EA+ LF M KE G P+ IT VG+LSAC +G +D G+ + + +S
Sbjct: 319 TGYAQNGMSDEAMVLFDGM-KEAGVI-PDKITLVGMLSACAAIGALDMGKWI-DKYASER 375
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAAC----HKCRNVDV 117
I + +VD+ A+ G + A E MP+K +EV A+++A C + +
Sbjct: 376 DFQHDIYVATALVDMYAKCGSLANALRVFEDMPQK-NEVTWNAMISALAFHGRACEAISL 434
Query: 116 TERVT 102
ER+T
Sbjct: 435 FERMT 439
Score = 85.9 bits (211), Expect = 5e-14
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 40/296 (13%)
Frame = -3
Query: 908 VENKMEINS-HLGSALIGMYGKCGDLLSARRVFDSMNRKDRVTWNAMITGYAQNGMSDE- 735
+ +M INS H + L+ D A +F + + +N M+ G
Sbjct: 68 IHTQMLINSIHKPNFLLPKLIDFQDFPYASTLFSQIPEPNSYAFNVMLRGLTTTWHKYPL 127
Query: 734 AIMLFDGMKEAGVDIDKITLVGVLSACASVGALDVGIWIDKFASQRGLQHDVYVATALTD 555
++ L+ MK G+ D T + AC ++ + G + G D +V ++
Sbjct: 128 SLHLYYRMKSLGLSPDNFTFPFLFIACWNLSEIRHGRAGHSSVVKTGFGSDGHVCHSMIT 187
Query: 554 MYAKCGCLDNALRVFEDMPLKNEVSWNAMISALAFHGRAMEAISLFKRMIKEDGAARPND 375
MY+ CG L A +VF+++P ++ VSWN+MIS GRA +A+ LF M + PN+
Sbjct: 188 MYSMCGELGCARKVFDEIPQRDSVSWNSMISGYGKMGRAQDAVGLFGEM--REAGFEPNE 245
Query: 374 ITFVGLLSACVHVGLVDEG-----------------------------------RRLFNS 300
+T V +L AC +G V G RR+F+S
Sbjct: 246 MTLVSVLGACGDLGDVGLGQWVEDFVVEKKLELNSYLGSALIGMFGKCGDLCSARRVFDS 305
Query: 299 MSSTFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEK---PDEVVLGALLAAC 141
M R+ ++ M+ A+ G+ EA + M E PD++ L +L+AC
Sbjct: 306 MKKKDRVT-----WNAMITGYAQNGMSDEAMVLFDGMKEAGVIPDKITLVGMLSAC 356
>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
protein product [Vitis vinifera]
Length = 618
Score = 545 bits (1404), Expect = e-152
Identities = 264/336 (78%), Positives = 302/336 (89%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
DAGFEPDE +LVS+LGACGDLGDL G +E FVVEN+M++NS +GSALIGMYGKCGDL
Sbjct: 220 DAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLS 279
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
SARRVFD M +KD VTWNAMITGYAQNG+SDEAI+LF GM+E+GV+ DKITLVGVLSACA
Sbjct: 280 SARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACA 339
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
S+GALD G W+D +AS+RGLQ+D+YV+TAL DMYAKCG LD+ALRVFEDMP KNEVSWNA
Sbjct: 340 SIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNA 399
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSS 291
MISALAFHGR E++SLFKRM KE GA RPNDI+F+G+LSACVH GLVDEGR+LF+ MSS
Sbjct: 400 MISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSS 459
Query: 290 TFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTE 111
+F LVPKIEH+SCMVDLLARAG +HEAWDFIEKMPEKPDEVVLGALL AC K RNVDV+E
Sbjct: 460 SFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSE 519
Query: 110 RVTQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
RV +LLE+EP NSGNY+ISSKI+AN+K+WDDSARM
Sbjct: 520 RVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARM 555
Score = 195 bits (496), Expect = 4e-47
Identities = 110/289 (38%), Positives = 176/289 (60%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
D G P+ + V AC +L L+ G+ V+++ + + H+ +LI MY +CG+L
Sbjct: 119 DFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELG 178
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
ARRVFD ++ KD V+WN+MI+GY++ G + +A+ LF M++AG + D++TLV +L AC
Sbjct: 179 CARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACG 238
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
+G L +G WI+ F + + + +V +AL MY KCG L +A RVF+ M K+ V+WNA
Sbjct: 239 DLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNA 298
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSS 291
MI+ A +G + EAI LF M + P+ IT VG+LSAC +G +D G+ L ++ +S
Sbjct: 299 MITGYAQNGVSDEAIILFSGM--RESGVNPDKITLVGVLSACASIGALDFGKWL-DTYAS 355
Query: 290 TFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
L I + ++D+ A+ G + +A E MP+K +EV A+++A
Sbjct: 356 ERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQK-NEVSWNAMISA 403
Score = 84.0 bits (206), Expect = 2e-13
Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 37/346 (10%)
Frame = -3
Query: 929 RSLEEFVVENKMEINS-HLGSALIGMYGKCGDLLSARRVFDSMNRKDRVTWNAMITGYAQ 753
+SL++ + +M IN+ H + L+ + D +A +F + + +N MI G
Sbjct: 45 KSLQQ--IHTQMIINAIHKPNFLLHRFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTT 102
Query: 752 NGMS-DEAIMLFDGMKEAGVDIDKITLVGVLSACASVGALDVGIWIDKFASQRGLQHDVY 576
+ I + MK+ G+ + T V ACA++ L+ G + GL D +
Sbjct: 103 TWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGH 162
Query: 575 VATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMISALAFHGRAMEAISLFKRMIKED 396
V +L MY++CG L A RVF+++ K+ VSWN+MIS + G A +A+ LF M D
Sbjct: 163 VRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEM--RD 220
Query: 395 GAARPNDITFVGLLSACVHV----------GLVDEGRRLFNS---------------MSS 291
P+++T V +L AC + G V E NS +SS
Sbjct: 221 AGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSS 280
Query: 290 TFRLVPK-----IEHYSCMVDLLARAGLIHEAWDFIEKMPE---KPDEVVLGALLAACHK 135
R+ + + ++ M+ A+ G+ EA M E PD++ L +L+AC
Sbjct: 281 ARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACAS 340
Query: 134 CRNVDVTERVTQLLLELEPSNSGNYVISSKI--YANLKKWDDSARM 3
+D + + E N YV ++ I YA DD+ R+
Sbjct: 341 IGALDFGKWLDTYASERGLQND-IYVSTALIDMYAKCGSLDDALRV 385
>ref|XP_009628569.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Nicotiana tomentosiformis]
gi|697148760|ref|XP_009628570.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g34400
[Nicotiana tomentosiformis]
gi|697148762|ref|XP_009628571.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g34400
[Nicotiana tomentosiformis]
gi|697148764|ref|XP_009628572.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g34400
[Nicotiana tomentosiformis]
gi|697148766|ref|XP_009628573.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g34400
[Nicotiana tomentosiformis]
Length = 669
Score = 520 bits (1338), Expect = e-144
Identities = 245/334 (73%), Positives = 296/334 (88%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
GFEPDE +LVSVLGACGDLGD++ G+ +EE+V+E +ME+NS +GSALI MYGKCGDL+SA
Sbjct: 273 GFEPDERTLVSVLGACGDLGDVNLGKRVEEYVMEKRMELNSFMGSALINMYGKCGDLVSA 332
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
RR+FD M +KD +TWNAMI+GYAQNG+SDE I LF+ MKE GV+++ ITLV VLSACAS+
Sbjct: 333 RRIFDGMKKKDVITWNAMISGYAQNGLSDETISLFNAMKETGVNLNNITLVSVLSACASI 392
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
GALDVG ID +AS+RG++HD+YVATAL DMYAKCG LD+A ++FE MP KNEVSWNAMI
Sbjct: 393 GALDVGKCIDDYASRRGIKHDIYVATALIDMYAKCGNLDDAYQIFESMPRKNEVSWNAMI 452
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
SALAFHGRA EA+SLF+RM E +RP+D+TFVG+LSACVH GLVDEGRRLF+ MSS+F
Sbjct: 453 SALAFHGRAQEALSLFERMSLESSDSRPDDVTFVGVLSACVHAGLVDEGRRLFDLMSSSF 512
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTERV 105
LVPK+EHYSCMVDLL+RAG ++EAW+FIEKMP+KPDE++LGALL AC K +N+DV ERV
Sbjct: 513 GLVPKVEHYSCMVDLLSRAGRVYEAWEFIEKMPQKPDEILLGALLGACQKLKNIDVGERV 572
Query: 104 TQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
QLLLE+EPSNSGNY+ISSKIYANL++WDDSARM
Sbjct: 573 MQLLLEMEPSNSGNYIISSKIYANLRRWDDSARM 606
Score = 186 bits (473), Expect = 2e-44
Identities = 105/287 (36%), Positives = 175/287 (60%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
G + D + V CG+L + G+ VV+N + ++ H+G +LI MY + G + A
Sbjct: 172 GLKTDNFTYPFVFMCCGNLLAVELGKLAHCEVVKNGLFVDFHVGHSLITMYSRIGKMGFA 231
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
R++FD M+++D V+WN+MI+GYAQ G S EA+ LF M+ G + D+ TLV VL AC +
Sbjct: 232 RKMFDEMSQRDLVSWNSMISGYAQTGCSREAVGLFIEMRNEGFEPDERTLVSVLGACGDL 291
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
G +++G ++++ ++ ++ + ++ +AL +MY KCG L +A R+F+ M K+ ++WNAMI
Sbjct: 292 GDVNLGKRVEEYVMEKRMELNSFMGSALINMYGKCGDLVSARRIFDGMKKKDVITWNAMI 351
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
S A +G + E ISLF M KE G N+IT V +LSAC +G +D G + + +S
Sbjct: 352 SGYAQNGLSDETISLFNAM-KETG-VNLNNITLVSVLSACASIGALDVG-KCIDDYASRR 408
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
+ I + ++D+ A+ G + +A+ E MP K +EV A+++A
Sbjct: 409 GIKHDIYVATALIDMYAKCGNLDDAYQIFESMPRK-NEVSWNAMISA 454
Score = 114 bits (284), Expect = 2e-22
Identities = 67/188 (35%), Positives = 107/188 (56%), Gaps = 4/188 (2%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
+ G + +LVSVL AC +G L G+ ++++ ++ + ++ +ALI MY KCG+L
Sbjct: 372 ETGVNLNNITLVSVLSACASIGALDVGKCIDDYASRRGIKHDIYVATALIDMYAKCGNLD 431
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDI--DKITLVGVLSA 657
A ++F+SM RK+ V+WNAMI+ A +G + EA+ LF+ M D D +T VGVLSA
Sbjct: 432 DAYQIFESMPRKNEVSWNAMISALAFHGRAQEALSLFERMSLESSDSRPDDVTFVGVLSA 491
Query: 656 CASVGALDVGIWI-DKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLK-NEV 483
C G +D G + D +S GL V + + D+ ++ G + A E MP K +E+
Sbjct: 492 CVHAGLVDEGRRLFDLMSSSFGLVPKVEHYSCMVDLLSRAGRVYEAWEFIEKMPQKPDEI 551
Query: 482 SWNAMISA 459
A++ A
Sbjct: 552 LLGALLGA 559
Score = 78.2 bits (191), Expect = 1e-11
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Frame = -3
Query: 827 ARRVFDSMNRKDRVTWNAMITGYAQNGMS-DEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
A +F ++ + +N +I G D ++ L+ MK G+ D T V C
Sbjct: 129 ATLLFSHIHSPNEYAFNILIRGLTTTWQKFDLSLELYYKMKSLGLKTDNFTYPFVFMCCG 188
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
++ A+++G + GL D +V +L MY++ G + A ++F++M ++ VSWN+
Sbjct: 189 NLLAVELGKLAHCEVVKNGLFVDFHVGHSLITMYSRIGKMGFARKMFDEMSQRDLVSWNS 248
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRL 309
MIS A G + EA+ LF M E P++ T V +L AC +G V+ G+R+
Sbjct: 249 MISGYAQTGCSREAVGLFIEMRNE--GFEPDERTLVSVLGACGDLGDVNLGKRV 300
>ref|XP_011042994.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Populus euphratica]
Length = 617
Score = 516 bits (1328), Expect = e-143
Identities = 246/336 (73%), Positives = 296/336 (88%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
+ GFEPDE +LVSVLGACGDLGDL GR +E FV+E KME+NS++GSALI MYGKCGDL+
Sbjct: 222 EEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYVGSALIDMYGKCGDLI 281
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
SARRVFDSM KD VTWNA+ITGYAQNG S+EAI+LF+GM+EAG + DK+T++ VLSAC+
Sbjct: 282 SARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPNPDKVTMIEVLSACS 341
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
++GALD+G W++ AS+RGLQHDVYVA+AL DMYAKCG LD+ALRVFE MP KNEVSWNA
Sbjct: 342 TIGALDLGKWVETHASERGLQHDVYVASALIDMYAKCGSLDDALRVFERMPRKNEVSWNA 401
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSS 291
MISALAFHG+A EA+SLF+RM K++G +PNDITF+G+LSACVH GLVDEGR+LF SM+
Sbjct: 402 MISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNL 461
Query: 290 TFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTE 111
+F LVPK+EHYSCMVDL ARAGL++EAWD I+KMP KPDE+VLG+LL AC + RN DV E
Sbjct: 462 SFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGE 521
Query: 110 RVTQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
RV QLLLE+E SNSGNY+ISSKIYAN+++WDDSA+M
Sbjct: 522 RVIQLLLEMELSNSGNYIISSKIYANMRRWDDSAKM 557
Score = 183 bits (465), Expect = 2e-43
Identities = 102/273 (37%), Positives = 168/273 (61%)
Frame = -3
Query: 962 ACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSARRVFDSMNRKDRVT 783
ACG++ L G+ V + ++ + ++ +LI MY + G++ AR+VFD M +D V+
Sbjct: 137 ACGNVWGLVHGKIGHCLVFKVGLDGDEYVNHSLITMYARAGEMGFARKVFDEMGDRDLVS 196
Query: 782 WNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASVGALDVGIWIDKFAS 603
WN+MI+GY++ G + EAI LF M+E G + D++TLV VL AC +G L +G W++ F
Sbjct: 197 WNSMISGYSKMGFAKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVL 256
Query: 602 QRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMISALAFHGRAMEAIS 423
++ ++ + YV +AL DMY KCG L +A RVF+ MP K+ V+WNA+I+ A +G + EAI
Sbjct: 257 EKKMEVNSYVGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIV 316
Query: 422 LFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTFRLVPKIEHYSCMVD 243
LF M + P+ +T + +LSAC +G +D G+ + + +S L + S ++D
Sbjct: 317 LFNGM--REAGPNPDKVTMIEVLSACSTIGALDLGKWV-ETHASERGLQHDVYVASALID 373
Query: 242 LLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
+ A+ G + +A E+MP K +EV A+++A
Sbjct: 374 MYAKCGSLDDALRVFERMPRK-NEVSWNAMISA 405
>ref|XP_009764015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Nicotiana sylvestris] gi|698534921|ref|XP_009764016.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g34400 [Nicotiana sylvestris]
Length = 622
Score = 513 bits (1322), Expect = e-143
Identities = 242/334 (72%), Positives = 294/334 (88%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
GFEPDE +LVSVLGACGDLGD++ G +EE+VVE +ME+NS +GSALI MYGKCGDL+SA
Sbjct: 226 GFEPDERTLVSVLGACGDLGDVNLGNQVEEYVVEKRMELNSFMGSALINMYGKCGDLVSA 285
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
RR+FD M +KD +TWNAMI+GYAQNG+S+E I LF+ MKE GV+++ ITLV VLSACAS+
Sbjct: 286 RRIFDGMKKKDVITWNAMISGYAQNGLSEETISLFNAMKETGVNLNNITLVSVLSACASI 345
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
GALDVG I +AS+RG++HD+YVATAL DMYAKCG LD+A ++FE MP KNEVSWNAMI
Sbjct: 346 GALDVGKCIHDYASRRGIKHDIYVATALIDMYAKCGYLDDAYQIFESMPRKNEVSWNAMI 405
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
SALAFHGRA EA+SLF+RM + +RP+D+TFVG+LSACVH GLVDEGRRLF+ MSS+F
Sbjct: 406 SALAFHGRAQEALSLFERMSLKSSDSRPDDVTFVGVLSACVHAGLVDEGRRLFDLMSSSF 465
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTERV 105
LVPK+EHYSCMVDLL+RAG ++EAW+FIEK+P+KPDE++LGALL AC K +N+DV ERV
Sbjct: 466 GLVPKVEHYSCMVDLLSRAGRVYEAWEFIEKIPQKPDEILLGALLGACQKLKNIDVGERV 525
Query: 104 TQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
QLLLE+EPSNSGNY+ISSKIYANL++WDDSARM
Sbjct: 526 MQLLLEMEPSNSGNYIISSKIYANLRRWDDSARM 559
Score = 190 bits (483), Expect = 1e-45
Identities = 107/287 (37%), Positives = 175/287 (60%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
G + D + V CG+L + G+ VV+N + ++ H+G +LI MY + G + A
Sbjct: 125 GLKTDNFTYPFVFMCCGNLLAVELGKLAHCEVVKNGLFVDFHVGHSLITMYSRIGKMGFA 184
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
R+VFD M+R+D V+WN+MI+GYAQ G S EA+ LF M+ G + D+ TLV VL AC +
Sbjct: 185 RKVFDEMSRRDLVSWNSMISGYAQTGCSREAVGLFMEMRNEGFEPDERTLVSVLGACGDL 244
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
G +++G ++++ ++ ++ + ++ +AL +MY KCG L +A R+F+ M K+ ++WNAMI
Sbjct: 245 GDVNLGNQVEEYVVEKRMELNSFMGSALINMYGKCGDLVSARRIFDGMKKKDVITWNAMI 304
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
S A +G + E ISLF M KE G N+IT V +LSAC +G +D G + + +S
Sbjct: 305 SGYAQNGLSEETISLFNAM-KETG-VNLNNITLVSVLSACASIGALDVG-KCIHDYASRR 361
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
+ I + ++D+ A+ G + +A+ E MP K +EV A+++A
Sbjct: 362 GIKHDIYVATALIDMYAKCGYLDDAYQIFESMPRK-NEVSWNAMISA 407
Score = 110 bits (274), Expect = 2e-21
Identities = 66/188 (35%), Positives = 106/188 (56%), Gaps = 4/188 (2%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
+ G + +LVSVL AC +G L G+ + ++ ++ + ++ +ALI MY KCG L
Sbjct: 325 ETGVNLNNITLVSVLSACASIGALDVGKCIHDYASRRGIKHDIYVATALIDMYAKCGYLD 384
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGM--KEAGVDIDKITLVGVLSA 657
A ++F+SM RK+ V+WNAMI+ A +G + EA+ LF+ M K + D +T VGVLSA
Sbjct: 385 DAYQIFESMPRKNEVSWNAMISALAFHGRAQEALSLFERMSLKSSDSRPDDVTFVGVLSA 444
Query: 656 CASVGALDVGIWI-DKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLK-NEV 483
C G +D G + D +S GL V + + D+ ++ G + A E +P K +E+
Sbjct: 445 CVHAGLVDEGRRLFDLMSSSFGLVPKVEHYSCMVDLLSRAGRVYEAWEFIEKIPQKPDEI 504
Query: 482 SWNAMISA 459
A++ A
Sbjct: 505 LLGALLGA 512
Score = 79.0 bits (193), Expect = 6e-12
Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 1/174 (0%)
Frame = -3
Query: 827 ARRVFDSMNRKDRVTWNAMITGYAQNGMS-DEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
A +F ++ + +N MI G D ++ L+ MK G+ D T V C
Sbjct: 82 ATLLFSHIHSPNEYAFNIMIRGLTTTWQKFDLSLELYYKMKSLGLKTDNFTYPFVFMCCG 141
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
++ A+++G + GL D +V +L MY++ G + A +VF++M ++ VSWN+
Sbjct: 142 NLLAVELGKLAHCEVVKNGLFVDFHVGHSLITMYSRIGKMGFARKVFDEMSRRDLVSWNS 201
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRL 309
MIS A G + EA+ LF M E P++ T V +L AC +G V+ G ++
Sbjct: 202 MISGYAQTGCSREAVGLFMEMRNE--GFEPDERTLVSVLGACGDLGDVNLGNQV 253
>ref|XP_002318172.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222858845|gb|EEE96392.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 617
Score = 511 bits (1316), Expect = e-142
Identities = 243/336 (72%), Positives = 294/336 (87%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
+ GFEPDE +LVSVLGACGDLGDL GR +E FV+E KME+NS++GSALI MYGKCGDL+
Sbjct: 222 EEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLI 281
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
SARRVFDSM KD VTWNA+ITGYAQNG S+EAI+LF+GM+EAG D++T++ VLSAC+
Sbjct: 282 SARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACS 341
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
++GALD+G W++ AS++GLQHDVYVA+AL DMYAKCG LD+A+RVFE MP KNEVSWNA
Sbjct: 342 TIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNA 401
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSS 291
MISALAFHG+A EA+SLF+RM K++G +PNDITF+G+LSACVH GLVDEGR+LF SM+
Sbjct: 402 MISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNL 461
Query: 290 TFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTE 111
+F LVPK+EHYSCMVDL ARAGL++EAWD I+KMP KPDE+VLG+LL AC + RN DV E
Sbjct: 462 SFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGE 521
Query: 110 RVTQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
RV QL LE+E SNSGNYVISSKIYAN+++WDDSA+M
Sbjct: 522 RVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKM 557
Score = 184 bits (468), Expect = 7e-44
Identities = 102/273 (37%), Positives = 168/273 (61%)
Frame = -3
Query: 962 ACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSARRVFDSMNRKDRVT 783
ACG++ L G+ V + ++ + ++ +LI MY +CG++ AR+VFD M +D V+
Sbjct: 137 ACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVS 196
Query: 782 WNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASVGALDVGIWIDKFAS 603
WN+MI+GY++ G + EAI LF M+E G + D++TLV VL AC +G L +G W++ F
Sbjct: 197 WNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVL 256
Query: 602 QRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMISALAFHGRAMEAIS 423
++ ++ + Y+ +AL DMY KCG L +A RVF+ MP K+ V+WNA+I+ A +G + EAI
Sbjct: 257 EKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIV 316
Query: 422 LFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTFRLVPKIEHYSCMVD 243
LF M + P+ +T + +LSAC +G +D G+ + + +S L + S ++D
Sbjct: 317 LFNGM--REAGPHPDRVTMIEVLSACSTIGALDLGKWV-ETHASEKGLQHDVYVASALID 373
Query: 242 LLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
+ A+ G + +A E MP K +EV A+++A
Sbjct: 374 MYAKCGSLDDAVRVFESMPHK-NEVSWNAMISA 405
>ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Cucumis sativus] gi|700206042|gb|KGN61161.1|
hypothetical protein Csa_2G060420 [Cucumis sativus]
Length = 619
Score = 507 bits (1306), Expect = e-141
Identities = 245/336 (72%), Positives = 287/336 (85%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
+AGF+P+E SLVSVLGACG+LGDL G +EEFVVENKM +N +GSALI MYGKCGDL+
Sbjct: 221 EAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLV 280
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
SARR+FDSM +KD+VTWNAMITGYAQNGMS+EAI LF M+ + D+ITL+G+LSACA
Sbjct: 281 SARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACA 340
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
S+GALD+G ++ +AS+RG Q DVYV TAL DMYAKCG LDNA RVF MP KNEVSWNA
Sbjct: 341 SIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNA 400
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSS 291
MISALAFHG+A EA++LFK M+ E G PNDITFVG+LSACVH GLVDEGRRLF+ MSS
Sbjct: 401 MISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSS 460
Query: 290 TFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTE 111
+F LVPKIEHYSCMVDL +RAG + EAWDF+ MPEKPDEV+LGALL AC K +N+D++E
Sbjct: 461 SFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISE 520
Query: 110 RVTQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
RV +LLLELEPSNSGNYVISSK+YANL++WDDSARM
Sbjct: 521 RVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARM 556
Score = 180 bits (456), Expect = 2e-42
Identities = 100/287 (34%), Positives = 170/287 (59%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
G +P+ + + AC +L + GR V+ ++ + H+ +LI MY +CG + A
Sbjct: 122 GLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDA 181
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
R+VFD +++KD V+WN+MI+GY++ + EA+ LF M EAG ++++LV VL AC +
Sbjct: 182 RKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGEL 241
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
G L +G W+++F + + + ++ +AL MY KCG L +A R+F+ M K++V+WNAMI
Sbjct: 242 GDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMI 301
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
+ A +G + EAI LF+ M A P+ IT +G+LSAC +G +D G+++ +S
Sbjct: 302 TGYAQNGMSEEAIKLFQDMRMSSTA--PDQITLIGILSACASIGALDLGKQV-EIYASER 358
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
+ + +VD+ A+ G + A+ MP K +EV A+++A
Sbjct: 359 GFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNK-NEVSWNAMISA 404
>ref|XP_007014360.1| Pentatricopeptide repeat superfamily protein isoform 4 [Theobroma
cacao] gi|590581496|ref|XP_007014363.1| Pentatricopeptide
repeat superfamily protein isoform 4 [Theobroma cacao]
gi|508784723|gb|EOY31979.1| Pentatricopeptide repeat
superfamily protein isoform 4 [Theobroma cacao]
gi|508784726|gb|EOY31982.1| Pentatricopeptide repeat
superfamily protein isoform 4 [Theobroma cacao]
Length = 619
Score = 506 bits (1304), Expect = e-141
Identities = 251/336 (74%), Positives = 288/336 (85%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
+ GF PDE +LVSVLGACGDLGDLS GR +E F +E+K+++NS + SALIGMYGKCGD +
Sbjct: 221 EEGFVPDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFV 280
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
SAR VFD M KD VTWNAMITGYAQNGMSDEAI LF GMK+AGV DKITLVGVLSACA
Sbjct: 281 SARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSACA 340
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
S+GALD+G ID +ASQRGLQ +++V+TAL DMYAKCG LDNA RVFE+MP+KNEVSWNA
Sbjct: 341 SIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRVFENMPVKNEVSWNA 400
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSS 291
MISALAFHGR EA+SLF+RM KE A PND+TFVG+LSACVH GLVDEG + F M+S
Sbjct: 401 MISALAFHGRPQEALSLFERMSKEGRDACPNDVTFVGVLSACVHAGLVDEGWQYFELMNS 460
Query: 290 TFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTE 111
++ L PKIEH SCMVDLLARAG ++EAWDFIEKMPEKPDE+VLGALL AC K +NVDV E
Sbjct: 461 SYGLTPKIEHCSCMVDLLARAGQLYEAWDFIEKMPEKPDEIVLGALLGACQKRKNVDVGE 520
Query: 110 RVTQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
RV QLLL++EPSNSGNYVISSKIYAN ++WDDSA+M
Sbjct: 521 RVMQLLLQMEPSNSGNYVISSKIYANSRRWDDSAKM 556
Score = 200 bits (508), Expect = 2e-48
Identities = 112/287 (39%), Positives = 179/287 (62%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
G +P++ + + AC +L +LS G++ V ++++SH +LI MY +CG+L SA
Sbjct: 122 GLKPNKFTYPFLFIACANLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMYARCGELGSA 181
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
RRVFD ++ +D V+WN+MI+GY++ G ++EA+ LF M+E G D++TLV VL AC +
Sbjct: 182 RRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVSVLGACGDL 241
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
G L +G W++ FA + ++ + ++A+AL MY KCG +A VF+ M K+ V+WNAMI
Sbjct: 242 GDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFVSARGVFDGMEGKDVVTWNAMI 301
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
+ A +G + EAI LF M +D P+ IT VG+LSAC +G +D G+R+ ++ +S
Sbjct: 302 TGYAQNGMSDEAIKLFHGM--KDAGVIPDKITLVGVLSACASIGALDLGKRI-DTYASQR 358
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
L I + +VD+ A+ G + A E MP K +EV A+++A
Sbjct: 359 GLQRNIFVSTALVDMYAKCGSLDNAQRVFENMPVK-NEVSWNAMISA 404
Score = 80.1 bits (196), Expect = 3e-12
Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 34/275 (12%)
Frame = -3
Query: 827 ARRVFDSMNRKDRVTWNAMITGYAQNGMS-DEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
A +F + + + +N MI G + + MK G+ +K T + ACA
Sbjct: 79 ASLLFSQIPQPNDYAFNVMIRGLTTTWQHYSTTLHFYYQMKFLGLKPNKFTYPFLFIACA 138
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
++ L G + GL D + +L MYA+CG L +A RVF+++ ++ VSWN+
Sbjct: 139 NLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMYARCGELGSARRVFDEISERDLVSWNS 198
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRL------ 309
MIS + G A EA+ LF +M +E+G P+++T V +L AC +G + GR +
Sbjct: 199 MISGYSKMGYANEAVGLFGKM-REEGFV-PDEMTLVSVLGACGDLGDLSLGRWVEGFAIE 256
Query: 308 ----FNSM--SSTFRLVPK------------------IEHYSCMVDLLARAGLIHEAWDF 201
NS S+ + K + ++ M+ A+ G+ EA
Sbjct: 257 HKIKLNSFIASALIGMYGKCGDFVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKL 316
Query: 200 IEKMPEK---PDEVVLGALLAACHKCRNVDVTERV 105
M + PD++ L +L+AC +D+ +R+
Sbjct: 317 FHGMKDAGVIPDKITLVGVLSACASIGALDLGKRI 351
>ref|XP_007014358.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
cacao] gi|590581482|ref|XP_007014359.1| Pentatricopeptide
repeat superfamily protein isoform 2 [Theobroma cacao]
gi|590581490|ref|XP_007014361.1| Pentatricopeptide repeat
superfamily protein isoform 2 [Theobroma cacao]
gi|590581493|ref|XP_007014362.1| Pentatricopeptide repeat
superfamily protein isoform 2 [Theobroma cacao]
gi|508784721|gb|EOY31977.1| Pentatricopeptide repeat
superfamily protein isoform 2 [Theobroma cacao]
gi|508784722|gb|EOY31978.1| Pentatricopeptide repeat
superfamily protein isoform 2 [Theobroma cacao]
gi|508784724|gb|EOY31980.1| Pentatricopeptide repeat
superfamily protein isoform 2 [Theobroma cacao]
gi|508784725|gb|EOY31981.1| Pentatricopeptide repeat
superfamily protein isoform 2 [Theobroma cacao]
Length = 565
Score = 506 bits (1304), Expect = e-141
Identities = 251/336 (74%), Positives = 288/336 (85%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
+ GF PDE +LVSVLGACGDLGDLS GR +E F +E+K+++NS + SALIGMYGKCGD +
Sbjct: 167 EEGFVPDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFV 226
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
SAR VFD M KD VTWNAMITGYAQNGMSDEAI LF GMK+AGV DKITLVGVLSACA
Sbjct: 227 SARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSACA 286
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
S+GALD+G ID +ASQRGLQ +++V+TAL DMYAKCG LDNA RVFE+MP+KNEVSWNA
Sbjct: 287 SIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRVFENMPVKNEVSWNA 346
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSS 291
MISALAFHGR EA+SLF+RM KE A PND+TFVG+LSACVH GLVDEG + F M+S
Sbjct: 347 MISALAFHGRPQEALSLFERMSKEGRDACPNDVTFVGVLSACVHAGLVDEGWQYFELMNS 406
Query: 290 TFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTE 111
++ L PKIEH SCMVDLLARAG ++EAWDFIEKMPEKPDE+VLGALL AC K +NVDV E
Sbjct: 407 SYGLTPKIEHCSCMVDLLARAGQLYEAWDFIEKMPEKPDEIVLGALLGACQKRKNVDVGE 466
Query: 110 RVTQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
RV QLLL++EPSNSGNYVISSKIYAN ++WDDSA+M
Sbjct: 467 RVMQLLLQMEPSNSGNYVISSKIYANSRRWDDSAKM 502
Score = 200 bits (508), Expect = 2e-48
Identities = 112/287 (39%), Positives = 179/287 (62%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
G +P++ + + AC +L +LS G++ V ++++SH +LI MY +CG+L SA
Sbjct: 68 GLKPNKFTYPFLFIACANLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMYARCGELGSA 127
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
RRVFD ++ +D V+WN+MI+GY++ G ++EA+ LF M+E G D++TLV VL AC +
Sbjct: 128 RRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVSVLGACGDL 187
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
G L +G W++ FA + ++ + ++A+AL MY KCG +A VF+ M K+ V+WNAMI
Sbjct: 188 GDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFVSARGVFDGMEGKDVVTWNAMI 247
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
+ A +G + EAI LF M +D P+ IT VG+LSAC +G +D G+R+ ++ +S
Sbjct: 248 TGYAQNGMSDEAIKLFHGM--KDAGVIPDKITLVGVLSACASIGALDLGKRI-DTYASQR 304
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
L I + +VD+ A+ G + A E MP K +EV A+++A
Sbjct: 305 GLQRNIFVSTALVDMYAKCGSLDNAQRVFENMPVK-NEVSWNAMISA 350
Score = 80.1 bits (196), Expect = 3e-12
Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 34/275 (12%)
Frame = -3
Query: 827 ARRVFDSMNRKDRVTWNAMITGYAQNGMS-DEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
A +F + + + +N MI G + + MK G+ +K T + ACA
Sbjct: 25 ASLLFSQIPQPNDYAFNVMIRGLTTTWQHYSTTLHFYYQMKFLGLKPNKFTYPFLFIACA 84
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
++ L G + GL D + +L MYA+CG L +A RVF+++ ++ VSWN+
Sbjct: 85 NLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMYARCGELGSARRVFDEISERDLVSWNS 144
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRL------ 309
MIS + G A EA+ LF +M +E+G P+++T V +L AC +G + GR +
Sbjct: 145 MISGYSKMGYANEAVGLFGKM-REEGFV-PDEMTLVSVLGACGDLGDLSLGRWVEGFAIE 202
Query: 308 ----FNSM--SSTFRLVPK------------------IEHYSCMVDLLARAGLIHEAWDF 201
NS S+ + K + ++ M+ A+ G+ EA
Sbjct: 203 HKIKLNSFIASALIGMYGKCGDFVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKL 262
Query: 200 IEKMPEK---PDEVVLGALLAACHKCRNVDVTERV 105
M + PD++ L +L+AC +D+ +R+
Sbjct: 263 FHGMKDAGVIPDKITLVGVLSACASIGALDLGKRI 297
>ref|XP_007014357.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|508784720|gb|EOY31976.1| Pentatricopeptide
repeat superfamily protein isoform 1 [Theobroma cacao]
Length = 656
Score = 506 bits (1304), Expect = e-141
Identities = 251/336 (74%), Positives = 288/336 (85%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
+ GF PDE +LVSVLGACGDLGDLS GR +E F +E+K+++NS + SALIGMYGKCGD +
Sbjct: 258 EEGFVPDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFV 317
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
SAR VFD M KD VTWNAMITGYAQNGMSDEAI LF GMK+AGV DKITLVGVLSACA
Sbjct: 318 SARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSACA 377
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
S+GALD+G ID +ASQRGLQ +++V+TAL DMYAKCG LDNA RVFE+MP+KNEVSWNA
Sbjct: 378 SIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRVFENMPVKNEVSWNA 437
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSS 291
MISALAFHGR EA+SLF+RM KE A PND+TFVG+LSACVH GLVDEG + F M+S
Sbjct: 438 MISALAFHGRPQEALSLFERMSKEGRDACPNDVTFVGVLSACVHAGLVDEGWQYFELMNS 497
Query: 290 TFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTE 111
++ L PKIEH SCMVDLLARAG ++EAWDFIEKMPEKPDE+VLGALL AC K +NVDV E
Sbjct: 498 SYGLTPKIEHCSCMVDLLARAGQLYEAWDFIEKMPEKPDEIVLGALLGACQKRKNVDVGE 557
Query: 110 RVTQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
RV QLLL++EPSNSGNYVISSKIYAN ++WDDSA+M
Sbjct: 558 RVMQLLLQMEPSNSGNYVISSKIYANSRRWDDSAKM 593
Score = 200 bits (508), Expect = 2e-48
Identities = 112/287 (39%), Positives = 179/287 (62%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
G +P++ + + AC +L +LS G++ V ++++SH +LI MY +CG+L SA
Sbjct: 159 GLKPNKFTYPFLFIACANLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMYARCGELGSA 218
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
RRVFD ++ +D V+WN+MI+GY++ G ++EA+ LF M+E G D++TLV VL AC +
Sbjct: 219 RRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVSVLGACGDL 278
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
G L +G W++ FA + ++ + ++A+AL MY KCG +A VF+ M K+ V+WNAMI
Sbjct: 279 GDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFVSARGVFDGMEGKDVVTWNAMI 338
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
+ A +G + EAI LF M +D P+ IT VG+LSAC +G +D G+R+ ++ +S
Sbjct: 339 TGYAQNGMSDEAIKLFHGM--KDAGVIPDKITLVGVLSACASIGALDLGKRI-DTYASQR 395
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
L I + +VD+ A+ G + A E MP K +EV A+++A
Sbjct: 396 GLQRNIFVSTALVDMYAKCGSLDNAQRVFENMPVK-NEVSWNAMISA 441
Score = 80.1 bits (196), Expect = 3e-12
Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 34/275 (12%)
Frame = -3
Query: 827 ARRVFDSMNRKDRVTWNAMITGYAQNGMS-DEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
A +F + + + +N MI G + + MK G+ +K T + ACA
Sbjct: 116 ASLLFSQIPQPNDYAFNVMIRGLTTTWQHYSTTLHFYYQMKFLGLKPNKFTYPFLFIACA 175
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
++ L G + GL D + +L MYA+CG L +A RVF+++ ++ VSWN+
Sbjct: 176 NLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMYARCGELGSARRVFDEISERDLVSWNS 235
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRL------ 309
MIS + G A EA+ LF +M +E+G P+++T V +L AC +G + GR +
Sbjct: 236 MISGYSKMGYANEAVGLFGKM-REEGFV-PDEMTLVSVLGACGDLGDLSLGRWVEGFAIE 293
Query: 308 ----FNSM--SSTFRLVPK------------------IEHYSCMVDLLARAGLIHEAWDF 201
NS S+ + K + ++ M+ A+ G+ EA
Sbjct: 294 HKIKLNSFIASALIGMYGKCGDFVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKL 353
Query: 200 IEKMPEK---PDEVVLGALLAACHKCRNVDVTERV 105
M + PD++ L +L+AC +D+ +R+
Sbjct: 354 FHGMKDAGVIPDKITLVGVLSACASIGALDLGKRI 388
>ref|XP_006474640.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400-like
[Citrus sinensis]
Length = 580
Score = 505 bits (1300), Expect = e-140
Identities = 245/333 (73%), Positives = 293/333 (87%)
Frame = -3
Query: 1001 FEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSAR 822
F PDE +LVSVLG+CGDLGDL G+ +E FVV+NKM++N ++GSALI MYGKCG L+SAR
Sbjct: 219 FLPDEITLVSVLGSCGDLGDLVLGKWVEGFVVKNKMDLNFYMGSALIDMYGKCGALVSAR 278
Query: 821 RVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASVG 642
+VFD+M KD VTWNAMIT YAQNG+S+EAIMLF+ MK AGV+ DKITL+GVLSACAS+G
Sbjct: 279 QVFDAMVNKDVVTWNAMITAYAQNGLSNEAIMLFNRMKYAGVNPDKITLIGVLSACASIG 338
Query: 641 ALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMIS 462
ALD+G W+DK+ASQRGL+HD++VATAL DM+AKCG +D+AL+VFEDMP+ NEVSWNAMIS
Sbjct: 339 ALDLGKWVDKYASQRGLRHDIFVATALIDMHAKCGSIDDALKVFEDMPVTNEVSWNAMIS 398
Query: 461 ALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTFR 282
ALAF+GRA EA+ LF+RM KE GAARPND+TF+G+LSACVH GLVDEGRRLF+ MSS+F
Sbjct: 399 ALAFNGRAHEALLLFERMSKEGGAARPNDVTFIGVLSACVHAGLVDEGRRLFDLMSSSFG 458
Query: 281 LVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTERVT 102
L+PK EHYSCMVDL ARAG + EAWDF+E+MPEK DE+VLGALL AC K +N DV++RV
Sbjct: 459 LIPKSEHYSCMVDLYARAGHLSEAWDFVERMPEKVDEIVLGALLGACQKQKNTDVSQRVM 518
Query: 101 QLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
QLL E+E SNSGNYVISSKI+ANLK WDDSA+M
Sbjct: 519 QLLPEIESSNSGNYVISSKIFANLKMWDDSAKM 551
Score = 188 bits (477), Expect = 7e-45
Identities = 109/287 (37%), Positives = 172/287 (59%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
G +PD + V +C +L L+ G S+ V + ++ + H+ +LI MY +CG L SA
Sbjct: 117 GLKPDNFTYPFVFISCANLLALNHGVSVHSSVFKIGLDEDDHVSHSLITMYARCGKLDSA 176
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
R+VFD + +D V+WN+MI+GY++ G + EA+ LF M+E D+ITLV VL +C +
Sbjct: 177 RKVFDEIRERDLVSWNSMISGYSKMGYAKEAVELFGRMREEEFLPDEITLVSVLGSCGDL 236
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
G L +G W++ F + + + Y+ +AL DMY KCG L +A +VF+ M K+ V+WNAMI
Sbjct: 237 GDLVLGKWVEGFVVKNKMDLNFYMGSALIDMYGKCGALVSARQVFDAMVNKDVVTWNAMI 296
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
+A A +G + EAI LF RM + P+ IT +G+LSAC +G +D G+ + + +S
Sbjct: 297 TAYAQNGLSNEAIMLFNRM--KYAGVNPDKITLIGVLSACASIGALDLGKWV-DKYASQR 353
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
L I + ++D+ A+ G I +A E MP +EV A+++A
Sbjct: 354 GLRHDIFVATALIDMHAKCGSIDDALKVFEDMP-VTNEVSWNAMISA 399
Score = 111 bits (278), Expect = 8e-22
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Frame = -3
Query: 1007 AGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLS 828
AG PD+ +L+ VL AC +G L G+ ++++ + + + + +ALI M+ KCG +
Sbjct: 318 AGVNPDKITLIGVLSACASIGALDLGKWVDKYASQRGLRHDIFVATALIDMHAKCGSIDD 377
Query: 827 ARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAG--VDIDKITLVGVLSAC 654
A +VF+ M + V+WNAMI+ A NG + EA++LF+ M + G + +T +GVLSAC
Sbjct: 378 ALKVFEDMPVTNEVSWNAMISALAFNGRAHEALLLFERMSKEGGAARPNDVTFIGVLSAC 437
Query: 653 ASVGALDVGIWI-DKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLK-NEVS 480
G +D G + D +S GL + + D+YA+ G L A E MP K +E+
Sbjct: 438 VHAGLVDEGRRLFDLMSSSFGLIPKSEHYSCMVDLYARAGHLSEAWDFVERMPEKVDEIV 497
Query: 479 WNAMISA 459
A++ A
Sbjct: 498 LGALLGA 504
Score = 100 bits (249), Expect = 2e-18
Identities = 73/238 (30%), Positives = 121/238 (50%), Gaps = 6/238 (2%)
Frame = -3
Query: 839 DLLSARRVFDSMNRKDRVTWNAMITGYAQNGMS-DEAIMLFDGMKEAGVDIDKITLVGVL 663
D A +F ++R + +N MI G ++ L+ MK G+ D T V
Sbjct: 70 DFNYASLLFHQISRPNEYAFNVMIRGLTTAWQKYSHSLKLYYQMKRLGLKPDNFTYPFVF 129
Query: 662 SACASVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEV 483
+CA++ AL+ G+ + + GL D +V+ +L MYA+CG LD+A +VF+++ ++ V
Sbjct: 130 ISCANLLALNHGVSVHSSVFKIGLDEDDHVSHSLITMYARCGKLDSARKVFDEIRERDLV 189
Query: 482 SWNAMISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSAC-----VHVGLVDEG 318
SWN+MIS + G A EA+ LF RM +E+ P++IT V +L +C + +G EG
Sbjct: 190 SWNSMISGYSKMGYAKEAVELFGRMREEE--FLPDEITLVSVLGSCGDLGDLVLGKWVEG 247
Query: 317 RRLFNSMSSTFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
+ N M F + S ++D+ + G + A + M K D V A++ A
Sbjct: 248 FVVKNKMDLNFYM------GSALIDMYGKCGALVSARQVFDAMVNK-DVVTWNAMITA 298
>ref|XP_006453289.1| hypothetical protein CICLE_v10010788mg, partial [Citrus clementina]
gi|557556515|gb|ESR66529.1| hypothetical protein
CICLE_v10010788mg, partial [Citrus clementina]
Length = 572
Score = 505 bits (1300), Expect = e-140
Identities = 245/333 (73%), Positives = 293/333 (87%)
Frame = -3
Query: 1001 FEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSAR 822
F PDE +LVSVLG+CGDLGDL G+ +E FVV+NKM++N ++GSALI MYGKCG L+SAR
Sbjct: 216 FLPDEITLVSVLGSCGDLGDLVLGKWVEGFVVKNKMDLNFYMGSALIDMYGKCGALVSAR 275
Query: 821 RVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASVG 642
+VFD+M KD VTWNAMIT YAQNG+S+EAIMLF+ MK AGV+ DKITL+GVLSACAS+G
Sbjct: 276 QVFDAMVNKDVVTWNAMITAYAQNGLSNEAIMLFNRMKYAGVNPDKITLIGVLSACASIG 335
Query: 641 ALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMIS 462
ALD+G W+DK+ASQRGL+HD++VATAL DM+AKCG +D+AL+VFEDMP+ NEVSWNAMIS
Sbjct: 336 ALDLGKWVDKYASQRGLRHDIFVATALIDMHAKCGSIDDALKVFEDMPVTNEVSWNAMIS 395
Query: 461 ALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTFR 282
ALAF+GRA EA+ LF+RM KE GAARPND+TF+G+LSACVH GLVDEGRRLF+ MSS+F
Sbjct: 396 ALAFNGRAHEALLLFERMSKEGGAARPNDVTFIGVLSACVHAGLVDEGRRLFDLMSSSFG 455
Query: 281 LVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTERVT 102
L+PK EHYSCMVDL ARAG + EAWDF+E+MPEK DE+VLGALL AC K +N DV++RV
Sbjct: 456 LIPKSEHYSCMVDLYARAGHLSEAWDFVERMPEKVDEIVLGALLGACQKQKNTDVSQRVM 515
Query: 101 QLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
QLL E+E SNSGNYVISSKI+ANLK WDDSA+M
Sbjct: 516 QLLPEIESSNSGNYVISSKIFANLKMWDDSAKM 548
Score = 188 bits (477), Expect = 7e-45
Identities = 109/287 (37%), Positives = 172/287 (59%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
G +PD + V +C +L L+ G S+ V + ++ + H+ +LI MY +CG L SA
Sbjct: 114 GLKPDNFTYPFVFISCANLLALNHGVSVHSSVFKIGLDEDDHVSHSLITMYARCGKLDSA 173
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
R+VFD + +D V+WN+MI+GY++ G + EA+ LF M+E D+ITLV VL +C +
Sbjct: 174 RKVFDEIRERDLVSWNSMISGYSKMGYAKEAVELFGRMREEEFLPDEITLVSVLGSCGDL 233
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
G L +G W++ F + + + Y+ +AL DMY KCG L +A +VF+ M K+ V+WNAMI
Sbjct: 234 GDLVLGKWVEGFVVKNKMDLNFYMGSALIDMYGKCGALVSARQVFDAMVNKDVVTWNAMI 293
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
+A A +G + EAI LF RM + P+ IT +G+LSAC +G +D G+ + + +S
Sbjct: 294 TAYAQNGLSNEAIMLFNRM--KYAGVNPDKITLIGVLSACASIGALDLGKWV-DKYASQR 350
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
L I + ++D+ A+ G I +A E MP +EV A+++A
Sbjct: 351 GLRHDIFVATALIDMHAKCGSIDDALKVFEDMP-VTNEVSWNAMISA 396
Score = 111 bits (278), Expect = 8e-22
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Frame = -3
Query: 1007 AGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLS 828
AG PD+ +L+ VL AC +G L G+ ++++ + + + + +ALI M+ KCG +
Sbjct: 315 AGVNPDKITLIGVLSACASIGALDLGKWVDKYASQRGLRHDIFVATALIDMHAKCGSIDD 374
Query: 827 ARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAG--VDIDKITLVGVLSAC 654
A +VF+ M + V+WNAMI+ A NG + EA++LF+ M + G + +T +GVLSAC
Sbjct: 375 ALKVFEDMPVTNEVSWNAMISALAFNGRAHEALLLFERMSKEGGAARPNDVTFIGVLSAC 434
Query: 653 ASVGALDVGIWI-DKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLK-NEVS 480
G +D G + D +S GL + + D+YA+ G L A E MP K +E+
Sbjct: 435 VHAGLVDEGRRLFDLMSSSFGLIPKSEHYSCMVDLYARAGHLSEAWDFVERMPEKVDEIV 494
Query: 479 WNAMISA 459
A++ A
Sbjct: 495 LGALLGA 501
Score = 100 bits (249), Expect = 2e-18
Identities = 73/238 (30%), Positives = 121/238 (50%), Gaps = 6/238 (2%)
Frame = -3
Query: 839 DLLSARRVFDSMNRKDRVTWNAMITGYAQNGMS-DEAIMLFDGMKEAGVDIDKITLVGVL 663
D A +F ++R + +N MI G ++ L+ MK G+ D T V
Sbjct: 67 DFNYASLLFHQISRPNEYAFNVMIRGLTTAWQKYSHSLKLYYQMKRLGLKPDNFTYPFVF 126
Query: 662 SACASVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEV 483
+CA++ AL+ G+ + + GL D +V+ +L MYA+CG LD+A +VF+++ ++ V
Sbjct: 127 ISCANLLALNHGVSVHSSVFKIGLDEDDHVSHSLITMYARCGKLDSARKVFDEIRERDLV 186
Query: 482 SWNAMISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSAC-----VHVGLVDEG 318
SWN+MIS + G A EA+ LF RM +E+ P++IT V +L +C + +G EG
Sbjct: 187 SWNSMISGYSKMGYAKEAVELFGRMREEE--FLPDEITLVSVLGSCGDLGDLVLGKWVEG 244
Query: 317 RRLFNSMSSTFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
+ N M F + S ++D+ + G + A + M K D V A++ A
Sbjct: 245 FVVKNKMDLNFYM------GSALIDMYGKCGALVSARQVFDAMVNK-DVVTWNAMITA 295
>ref|XP_006366836.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400-like
[Solanum tuberosum]
Length = 622
Score = 504 bits (1298), Expect = e-140
Identities = 241/334 (72%), Positives = 291/334 (87%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
GFEPDE SLVSVL ACGDLGD++ G+ +EE+VV +ME+NS +GSALI MYGKCGDL+SA
Sbjct: 226 GFEPDERSLVSVLVACGDLGDVNLGKWVEEYVVGKRMEMNSFIGSALINMYGKCGDLVSA 285
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
RR+FD M +KD +TWNAMI+GYAQNG+SDE I LF+ MKEAGV+ + ITLV VLSACAS+
Sbjct: 286 RRIFDGMRKKDAITWNAMISGYAQNGLSDETISLFNAMKEAGVNPNNITLVSVLSACASI 345
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
GALDVG ID +AS+RG++HD+YVATAL DMYAK G LD+A ++FE MP KNEVSWNAMI
Sbjct: 346 GALDVGKSIDDYASRRGIRHDIYVATALIDMYAKSGKLDDAYQIFESMPRKNEVSWNAMI 405
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
SALAFHGRA EA+SLF+RM E A P+D+TFVG+LSACVH GLVD+G+ +F+ M+S+F
Sbjct: 406 SALAFHGRAQEALSLFERMSLESSDACPDDVTFVGVLSACVHAGLVDQGKHIFDIMNSSF 465
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTERV 105
LVPK+EHYSCMVDLL+RAG ++EAWDFIEKMP+KPDE++LGALL AC K +N+DV ERV
Sbjct: 466 GLVPKVEHYSCMVDLLSRAGRVYEAWDFIEKMPQKPDEILLGALLGACQKLKNIDVGERV 525
Query: 104 TQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
QLLLE+EPSNSGNY+ISSKIYANL++WDDSARM
Sbjct: 526 MQLLLEMEPSNSGNYIISSKIYANLRRWDDSARM 559
Score = 191 bits (484), Expect = 1e-45
Identities = 103/287 (35%), Positives = 176/287 (61%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
G + D + V CG+L + G VV+N + ++ H+G +LI MY + G + A
Sbjct: 125 GLKTDNFTYPFVFMCCGNLLAVKLGGLAHCEVVKNGLFVDFHVGHSLITMYSRFGKMGFA 184
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
R+VFD ++++D V+WN+MI+GYAQ G S EA+ LF M+ G + D+ +LV VL AC +
Sbjct: 185 RKVFDEISQRDLVSWNSMISGYAQTGCSREAVGLFMEMRNDGFEPDERSLVSVLVACGDL 244
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
G +++G W++++ + ++ + ++ +AL +MY KCG L +A R+F+ M K+ ++WNAMI
Sbjct: 245 GDVNLGKWVEEYVVGKRMEMNSFIGSALINMYGKCGDLVSARRIFDGMRKKDAITWNAMI 304
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
S A +G + E ISLF M ++ PN+IT V +LSAC +G +D G+ + + +S
Sbjct: 305 SGYAQNGLSDETISLFNAM--KEAGVNPNNITLVSVLSACASIGALDVGKSI-DDYASRR 361
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
+ I + ++D+ A++G + +A+ E MP K +EV A+++A
Sbjct: 362 GIRHDIYVATALIDMYAKSGKLDDAYQIFESMPRK-NEVSWNAMISA 407
Score = 115 bits (288), Expect = 6e-23
Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 4/188 (2%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
+AG P+ +LVSVL AC +G L G+S++++ + + ++ +ALI MY K G L
Sbjct: 325 EAGVNPNNITLVSVLSACASIGALDVGKSIDDYASRRGIRHDIYVATALIDMYAKSGKLD 384
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDI--DKITLVGVLSA 657
A ++F+SM RK+ V+WNAMI+ A +G + EA+ LF+ M D D +T VGVLSA
Sbjct: 385 DAYQIFESMPRKNEVSWNAMISALAFHGRAQEALSLFERMSLESSDACPDDVTFVGVLSA 444
Query: 656 CASVGALDVGIWI-DKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLK-NEV 483
C G +D G I D S GL V + + D+ ++ G + A E MP K +E+
Sbjct: 445 CVHAGLVDQGKHIFDIMNSSFGLVPKVEHYSCMVDLLSRAGRVYEAWDFIEKMPQKPDEI 504
Query: 482 SWNAMISA 459
A++ A
Sbjct: 505 LLGALLGA 512
>ref|XP_004242849.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Solanum lycopersicum] gi|723713151|ref|XP_010323361.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g34400 [Solanum lycopersicum]
gi|723713158|ref|XP_010323362.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g34400
[Solanum lycopersicum]
Length = 622
Score = 503 bits (1295), Expect = e-140
Identities = 240/336 (71%), Positives = 293/336 (87%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
D GFEPDE SLVSVL ACGDLGD++ G+ +EE+V+ +ME+NS +GSALI MYGKCGDL+
Sbjct: 224 DEGFEPDERSLVSVLVACGDLGDVNLGKWVEEYVLGKRMEMNSFIGSALINMYGKCGDLV 283
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
SARR+FD M +KD +TWNAMI+GYAQNG+SDE I LF+ MKEAGV+ + ITLV VLSACA
Sbjct: 284 SARRIFDGMKKKDAITWNAMISGYAQNGLSDETISLFNAMKEAGVNPNNITLVSVLSACA 343
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
S+GALDVG ID +AS+RG+++D+YVATAL DMYAK G LD+A ++FE MP KNEVSWNA
Sbjct: 344 SIGALDVGKSIDDYASRRGIKYDIYVATALIDMYAKSGKLDDAYQIFESMPRKNEVSWNA 403
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSS 291
MISALAFHGRA EA+SLF+RM + ARP+D+TFVG+LSACVH GLVD+G+ +F+ M+S
Sbjct: 404 MISALAFHGRAQEALSLFERMSLKSSDARPDDVTFVGVLSACVHAGLVDKGKYIFDIMNS 463
Query: 290 TFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTE 111
+F LVPK+EHYSCMVDLL+RAG ++EAWDFIEKMP+KPDE++LGALL AC K +N+DV E
Sbjct: 464 SFGLVPKVEHYSCMVDLLSRAGRVYEAWDFIEKMPQKPDEILLGALLGACQKLKNIDVGE 523
Query: 110 RVTQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
RV QLLLE+EPSNSGNY+ISSKIYANL++WDDSARM
Sbjct: 524 RVMQLLLEMEPSNSGNYIISSKIYANLRRWDDSARM 559
Score = 194 bits (492), Expect = 1e-46
Identities = 104/287 (36%), Positives = 177/287 (61%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
G + D + V CG+L + GR VV+N + ++ H+G +LI MY + G + A
Sbjct: 125 GLKTDNFTYPFVFMCCGNLLAVKLGRLAHCEVVKNGLFVDFHVGHSLITMYSRFGKMGFA 184
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
R+VFD ++ +D V+WN+MI+GYAQ G S EA+ LF M++ G + D+ +LV VL AC +
Sbjct: 185 RKVFDEISLRDLVSWNSMISGYAQTGCSREAVGLFMEMRDEGFEPDERSLVSVLVACGDL 244
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
G +++G W++++ + ++ + ++ +AL +MY KCG L +A R+F+ M K+ ++WNAMI
Sbjct: 245 GDVNLGKWVEEYVLGKRMEMNSFIGSALINMYGKCGDLVSARRIFDGMKKKDAITWNAMI 304
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
S A +G + E ISLF M ++ PN+IT V +LSAC +G +D G+ + + +S
Sbjct: 305 SGYAQNGLSDETISLFNAM--KEAGVNPNNITLVSVLSACASIGALDVGKSI-DDYASRR 361
Query: 284 RLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
+ I + ++D+ A++G + +A+ E MP K +EV A+++A
Sbjct: 362 GIKYDIYVATALIDMYAKSGKLDDAYQIFESMPRK-NEVSWNAMISA 407
Score = 78.2 bits (191), Expect = 1e-11
Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 39/280 (13%)
Frame = -3
Query: 827 ARRVFDSMNRKDRVTWNAMITGYAQNGMS-DEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
A +F ++ + +N MI G D ++ + MK G+ D T V C
Sbjct: 82 ATLLFSHIHSPNEYAFNIMIRGLTTTWQKFDLSLEFYHKMKSLGLKTDNFTYPFVFMCCG 141
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
++ A+ +G + GL D +V +L MY++ G + A +VF+++ L++ VSWN+
Sbjct: 142 NLLAVKLGRLAHCEVVKNGLFVDFHVGHSLITMYSRFGKMGFARKVFDEISLRDLVSWNS 201
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEG--------- 318
MIS A G + EA+ LF M D P++ + V +L AC +G V+ G
Sbjct: 202 MISGYAQTGCSREAVGLFMEM--RDEGFEPDERSLVSVLVACGDLGDVNLGKWVEEYVLG 259
Query: 317 --------------------------RRLFNSMSSTFRLVPKIEHYSCMVDLLARAGLIH 216
RR+F+ M + ++ M+ A+ GL
Sbjct: 260 KRMEMNSFIGSALINMYGKCGDLVSARRIFDGMKKKDAIT-----WNAMISGYAQNGLSD 314
Query: 215 EAWDFIEKMPE---KPDEVVLGALLAACHKCRNVDVTERV 105
E M E P+ + L ++L+AC +DV + +
Sbjct: 315 ETISLFNAMKEAGVNPNNITLVSVLSACASIGALDVGKSI 354
>ref|XP_012066813.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Jatropha curcas] gi|802538086|ref|XP_012066819.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g34400 [Jatropha curcas]
gi|802538090|ref|XP_012066826.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g34400
[Jatropha curcas] gi|643741089|gb|KDP46635.1|
hypothetical protein JCGZ_04569 [Jatropha curcas]
Length = 614
Score = 501 bits (1290), Expect = e-139
Identities = 244/336 (72%), Positives = 287/336 (85%)
Frame = -3
Query: 1010 DAGFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLL 831
+ GF PDE +LVSVLGACGDLGDLS G+ +E FV E KME+N++LGSALI MYGKCGDL
Sbjct: 220 EQGFVPDEMTLVSVLGACGDLGDLSLGKWVEGFVDEKKMELNTYLGSALIDMYGKCGDLT 279
Query: 830 SARRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACA 651
SARRVFD M +KD V WNAMITGYAQNG SD+AI LF+ M+E+GVD D +T+V VLSACA
Sbjct: 280 SARRVFDGMVKKDVVAWNAMITGYAQNGASDDAITLFNDMRESGVDPDNVTMVVVLSACA 339
Query: 650 SVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNA 471
+GALD+G W++ +A QRG QHDVYVA+AL DMYAKCG LDNALRVFE MP KNEVSWNA
Sbjct: 340 LIGALDMGKWVETYALQRGSQHDVYVASALVDMYAKCGNLDNALRVFESMPHKNEVSWNA 399
Query: 470 MISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSS 291
MISALAFHGRA E +SLF+RM+ DG+ PN ITFVG+LSACVH GLVDEG +LF+SM++
Sbjct: 400 MISALAFHGRAQETLSLFRRML-NDGSVEPNGITFVGVLSACVHAGLVDEGHQLFDSMNT 458
Query: 290 TFRLVPKIEHYSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAACHKCRNVDVTE 111
+F LVP IEHYSCMVDLLARAG ++EAWDFIE+MP KPD +VLGALL AC K NVDV E
Sbjct: 459 SFGLVPTIEHYSCMVDLLARAGHLYEAWDFIERMPGKPDAIVLGALLGACQKLENVDVGE 518
Query: 110 RVTQLLLELEPSNSGNYVISSKIYANLKKWDDSARM 3
RV+++LLE+EPSNSGNY+ISS+IYAN ++WDDSA+M
Sbjct: 519 RVSKMLLEMEPSNSGNYIISSQIYANFRRWDDSAKM 554
Score = 184 bits (467), Expect = 1e-43
Identities = 104/291 (35%), Positives = 171/291 (58%), Gaps = 4/291 (1%)
Frame = -3
Query: 1004 GFEPDETSLVSVLGACGDLGDLSFGRSLEEFVVENKMEINSHLGSALIGMYGKCGDLLSA 825
G +P+ + + +C +L L+ G+ V + ++ N H+ +LI MY +C +L A
Sbjct: 121 GLKPNNFTYPFLFISCANLLALNHGQVGHSMVFKIGLDQNCHVNHSLITMYARCSELGYA 180
Query: 824 RRVFDSMNRKDRVTWNAMITGYAQNGMSDEAIMLFDGMKEAGVDIDKITLVGVLSACASV 645
+VFD + +D V+WN+MI+GY++ G + +A+ LF MKE G D++TLV VL AC +
Sbjct: 181 YKVFDDICERDLVSWNSMISGYSKMGFAQDAVRLFGEMKEQGFVPDEMTLVSVLGACGDL 240
Query: 644 GALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEVSWNAMI 465
G L +G W++ F ++ ++ + Y+ +AL DMY KCG L +A RVF+ M K+ V+WNAMI
Sbjct: 241 GDLSLGKWVEGFVDEKKMELNTYLGSALIDMYGKCGDLTSARRVFDGMVKKDVVAWNAMI 300
Query: 464 SALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHVGLVDEGRRLFNSMSSTF 285
+ A +G + +AI+LF M + P+++T V +LSAC +G +D G+ + T+
Sbjct: 301 TGYAQNGASDDAITLFNDM--RESGVDPDNVTMVVVLSACALIGALDMGKWV-----ETY 353
Query: 284 RLVPKIEH----YSCMVDLLARAGLIHEAWDFIEKMPEKPDEVVLGALLAA 144
L +H S +VD+ A+ G + A E MP K +EV A+++A
Sbjct: 354 ALQRGSQHDVYVASALVDMYAKCGNLDNALRVFESMPHK-NEVSWNAMISA 403
Score = 77.0 bits (188), Expect = 2e-11
Identities = 85/315 (26%), Positives = 139/315 (44%), Gaps = 36/315 (11%)
Frame = -3
Query: 839 DLLSARRVFDSMNRKDRVTWNAMITGYAQNGMSDE-AIMLFDGMKEAGVDIDKITLVGVL 663
D A F + + +N MI G +I L+ MK G+ + T +
Sbjct: 74 DFTYASLFFSQIPNPNDYAFNIMIRGLTATWRKYPLSIQLYYQMKFLGLKPNNFTYPFLF 133
Query: 662 SACASVGALDVGIWIDKFASQRGLQHDVYVATALTDMYAKCGCLDNALRVFEDMPLKNEV 483
+CA++ AL+ G + GL + +V +L MYA+C L A +VF+D+ ++ V
Sbjct: 134 ISCANLLALNHGQVGHSMVFKIGLDQNCHVNHSLITMYARCSELGYAYKVFDDICERDLV 193
Query: 482 SWNAMISALAFHGRAMEAISLFKRMIKEDGAARPNDITFVGLLSACVHV----------G 333
SWN+MIS + G A +A+ LF M KE G P+++T V +L AC + G
Sbjct: 194 SWNSMISGYSKMGFAQDAVRLFGEM-KEQGFV-PDEMTLVSVLGACGDLGDLSLGKWVEG 251
Query: 332 LVDEGRRLFNS---------------MSSTFR----LVPK-IEHYSCMVDLLARAGLIHE 213
VDE + N+ ++S R +V K + ++ M+ A+ G +
Sbjct: 252 FVDEKKMELNTYLGSALIDMYGKCGDLTSARRVFDGMVKKDVVAWNAMITGYAQNGASDD 311
Query: 212 AWDFIEKMPEK---PDEVVLGALLAACHKCRNVDVTERVTQLLLELEPSNSGNYVISSKI 42
A M E PD V + +L+AC +D+ + V L+ S YV S+ +
Sbjct: 312 AITLFNDMRESGVDPDNVTMVVVLSACALIGALDMGKWVETYALQ-RGSQHDVYVASALV 370
Query: 41 --YANLKKWDDSARM 3
YA D++ R+
Sbjct: 371 DMYAKCGNLDNALRV 385