BLASTX nr result

ID: Ziziphus21_contig00030320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00030320
         (495 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008236131.1| PREDICTED: pentatricopeptide repeat-containi...    83   7e-14
ref|XP_010086845.1| hypothetical protein L484_006075 [Morus nota...    75   1e-11
ref|XP_008358384.1| PREDICTED: pentatricopeptide repeat-containi...    68   3e-09
ref|XP_008358362.1| PREDICTED: pentatricopeptide repeat-containi...    68   3e-09
ref|XP_011458358.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06

>ref|XP_008236131.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Prunus mume]
          Length = 704

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 52/104 (50%), Positives = 66/104 (63%)
 Frame = -1

Query: 312 PLISNINSPSVTNIVIHLNAIMSGNAKEVVFGFMTIPRWYLCHIPFSKNASMAFCRFAST 133
           PL +  N+PS T  V+    IM GN   VVF  M++P   LC  P   +AS+   RF ST
Sbjct: 20  PLGNMFNNPSKTYNVVIRRMIM-GNRNGVVFRLMSMPLGRLCLRP---HASVQLSRFTST 75

Query: 132 LKVRNLTRETDLDSYSLNKRISHLIRTGQINEARELFDKMKQRN 1
              ++ T+  D D +SLNKRISHLIRTGQI +ARE FD+M+QRN
Sbjct: 76  STDKSSTQALDGDFFSLNKRISHLIRTGQIAQAREDFDRMEQRN 119


>ref|XP_010086845.1| hypothetical protein L484_006075 [Morus notabilis]
           gi|587833216|gb|EXB24043.1| hypothetical protein
           L484_006075 [Morus notabilis]
          Length = 708

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 44/96 (45%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
 Frame = -1

Query: 282 VTNIVIHLNAIMSGNAKEVVFGFMTIPRWYLCHIPFSKN--ASMAFCRFASTLKVRNLTR 109
           +TN+ I L   + G A  VV G  +      C +  SK+  AS  F RF+ST K  +L  
Sbjct: 1   MTNVAIRLRKTLMGTAYAVVLGMPSSRHLCQCPVSISKSQRASSTFRRFSSTSKPNSLVP 60

Query: 108 ETDLDSYSLNKRISHLIRTGQINEARELFDKMKQRN 1
             +LD   LNK+ISHLIR+G+I EARE FD MK RN
Sbjct: 61  NPNLDLKFLNKKISHLIRSGRIGEAREAFDGMKHRN 96


>ref|XP_008358384.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Malus domestica]
          Length = 534

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
 Frame = -1

Query: 261 LNAIMSGNAKEVVFGFMTIPRWYLCHI---PFSKNASMAFCRFASTLKVRNLTRETDLDS 91
           +  ++ GNA  VVF  +T+P+         P S  AS++  RFAST K R+ T+  D ++
Sbjct: 4   IRRMILGNANGVVFRLITVPKGLRLRPLANPISNPASVS-SRFASTSKPRSSTQTRDGEN 62

Query: 90  Y-SLNKRISHLIRTGQINEARELFDKMKQRN 1
           + +LNKRISHLIRTG I +ARE+FD+M  RN
Sbjct: 63  FFALNKRISHLIRTGHIAQAREVFDQMPXRN 93


>ref|XP_008358362.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Malus domestica]
          Length = 678

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
 Frame = -1

Query: 261 LNAIMSGNAKEVVFGFMTIPRWYLCHI---PFSKNASMAFCRFASTLKVRNLTRETDLDS 91
           +  ++ GNA  VVF  +T+P+         P S  AS++  RFAST K R+ T+  D ++
Sbjct: 4   IRRMILGNANGVVFRLITVPKGLRLRPLANPISNPASVS-SRFASTSKPRSSTQTRDGEN 62

Query: 90  Y-SLNKRISHLIRTGQINEARELFDKMKQRN 1
           + +LNKRISHLIRTG I +ARE+FD+M  RN
Sbjct: 63  FFALNKRISHLIRTGHIAQAREVFDQMPXRN 93


>ref|XP_011458358.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Fragaria vesca subsp. vesca]
           gi|764531234|ref|XP_011458359.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Fragaria vesca subsp. vesca]
           gi|764531238|ref|XP_011458360.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Fragaria vesca subsp. vesca]
          Length = 671

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
 Frame = -1

Query: 282 VTNIVIHLNAIMSGNAKEVVFGFMTIPRWYLCHIPFSKNASMAFCRFASTLK---VRNLT 112
           +TN+VI L  I+    K  +F F  I R +L  +    ++      FAST K      L 
Sbjct: 1   MTNLVI-LRTILGNTRKGFLFRF--IDRRFLVPLTLLTHS------FASTSKPDSTSTLP 51

Query: 111 RETDLDSYSLNKRISHLIRTGQINEARELFDKMKQRN 1
           +  DL  +SLNK ISHLIRTG+I++ARE+FD MK RN
Sbjct: 52  KHPDL--FSLNKNISHLIRTGRISQAREVFDNMKHRN 86


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