BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00024852
         (700 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010100361.1| hypothetical protein L484_027670 [Morus nota...   233   1e-58
ref|XP_009359234.1| PREDICTED: pentatricopeptide repeat-containi...   227   6e-57
ref|XP_008221931.1| PREDICTED: pentatricopeptide repeat-containi...   225   2e-56
ref|XP_007044848.1| Pentatricopeptide repeat superfamily protein...   225   2e-56
ref|XP_007227261.1| hypothetical protein PRUPE_ppa017811mg [Prun...   225   2e-56
ref|XP_008340122.1| PREDICTED: pentatricopeptide repeat-containi...   224   4e-56
ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containi...   223   1e-55
ref|XP_008389736.1| PREDICTED: pentatricopeptide repeat-containi...   221   4e-55
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi...   220   8e-55
ref|XP_012460314.1| PREDICTED: pentatricopeptide repeat-containi...   219   1e-54
ref|XP_012085508.1| PREDICTED: pentatricopeptide repeat-containi...   218   2e-54
ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containi...   214   5e-53
ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citr...   214   5e-53
ref|XP_002312667.1| pentatricopeptide repeat-containing family p...   212   2e-52
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,...   208   2e-51
ref|XP_011034038.1| PREDICTED: pentatricopeptide repeat-containi...   208   3e-51
ref|XP_013446721.1| PPR containing plant-like protein [Medicago ...   208   3e-51
ref|XP_008446139.1| PREDICTED: pentatricopeptide repeat-containi...   204   3e-50
ref|XP_012572260.1| PREDICTED: pentatricopeptide repeat-containi...   204   4e-50
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi...   204   6e-50

>ref|XP_010100361.1| hypothetical protein L484_027670 [Morus notabilis]
           gi|587893963|gb|EXB82495.1| hypothetical protein
           L484_027670 [Morus notabilis]
          Length = 513

 Score =  233 bits (593), Expect = 1e-58
 Identities = 116/160 (72%), Positives = 132/160 (82%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           M HSLG  RLLYR+RI+Y VK G I+ AVQLFDEM++S CRVFS+DYNRFIGVL R SR 
Sbjct: 1   MIHSLGAHRLLYRSRIAYCVKTGLIDHAVQLFDEMSHSDCRVFSVDYNRFIGVLARHSRL 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA++YY KM PQGFSL PFTYSRFISALC V     NF  V+KLL+DMDKLG  PDIWA
Sbjct: 61  DLAEHYYHKMAPQGFSLYPFTYSRFISALCAV----KNFLLVEKLLEDMDKLGCIPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FNIYL+ LCGE RV+LA++VF +MVE+GR PDVVTYTILI
Sbjct: 117 FNIYLNVLCGEHRVQLALEVFRRMVERGREPDVVTYTILI 156



 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 37/117 (31%), Positives = 57/117 (48%)
 Frame = -3

Query: 353 IDYNRFIGVLVRQSRFDLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDK 174
           + YN  IG   +  R   A   + +M  +G      T++  I A  +VGS     D   +
Sbjct: 325 VSYNTIIGAFCKLLRVRRAYQLFEEMRQKGIEPDVVTFTILIKAFLSVGSS----DVAKR 380

Query: 173 LLKDMDKLGYFPDIWAFNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILIH 3
           LL  M  +G  PD   + I +D LC   ++ +A  VF  MVE+G  PDV++Y  +I+
Sbjct: 381 LLDQMTGMGLLPDCLFYTIIVDHLCKAGKIGMAHSVFSDMVERGITPDVISYNAIIN 437



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 42/151 (27%), Positives = 70/151 (46%)
 Frame = -3

Query: 458 LLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYCK 279
           L+Y + IS + +AG I++A  + D M    C    + YN  +     +   D A+     
Sbjct: 220 LIYNSLISGFCRAGRIDKAQVIKDFMKRDGCEPDLVTYNVLLIYCCDKLMLDEANKLINT 279

Query: 278 MIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLDFLC 99
           M   G     ++Y++ +  LC    +    D    L+ D  +     ++ ++N  +   C
Sbjct: 280 MERIGMKPDSYSYNKLLKGLC----RAHRPDKAYLLMVDSMESKGLANVVSYNTIIGAFC 335

Query: 98  GESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
              RV  A Q+F +M +KG  PDVVT+TILI
Sbjct: 336 KLLRVRRAYQLFEEMRQKGIEPDVVTFTILI 366


>ref|XP_009359234.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Pyrus x bretschneideri]
           gi|694357267|ref|XP_009359237.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Pyrus x bretschneideri]
          Length = 515

 Score =  227 bits (578), Expect = 6e-57
 Identities = 105/160 (65%), Positives = 135/160 (84%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MY SLGV RL+YR+RI+YYVK G I+QA+Q+FDEMT+S CRVFS+DYNRFIGVLV+ SR+
Sbjct: 1   MYRSLGVHRLIYRSRIAYYVKTGLIDQALQVFDEMTHSDCRVFSVDYNRFIGVLVKHSRY 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA++YY +M+P+GFSL PFTYSRFIS LC    K  NF  ++KLL+DMD++G  PDIWA
Sbjct: 61  DLAEHYYYEMVPKGFSLDPFTYSRFISGLC----KIRNFTLIEKLLRDMDRIGALPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FNIYL+ LC E+R + A+++F +MV+KGR PDVV+YTI+I
Sbjct: 117 FNIYLNLLCQENRADFALELFHRMVDKGREPDVVSYTIII 156



 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 38/117 (32%), Positives = 57/117 (48%)
 Frame = -3

Query: 353 IDYNRFIGVLVRQSRFDLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDK 174
           + YN  I    + +R   A   + +M  +G      T++  I+A    GS     D V K
Sbjct: 325 VSYNTIITAFCKANRTGSAYKLFEEMRNKGTVPDLVTFTILINAFLREGSS----DIVKK 380

Query: 173 LLKDMDKLGYFPDIWAFNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILIH 3
           LL  M  +G  PD   +   +D LC    +E+A  VF +M+EKG  PDV++Y  LI+
Sbjct: 381 LLDQMTAMGLLPDRIFYTTIVDHLCKSGNIEMAYSVFSEMLEKGITPDVISYNALIN 437



 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 37/149 (24%), Positives = 67/149 (44%)
 Frame = -3

Query: 452 YRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYCKMI 273
           Y T I+ + KA     A +LF+EM N       + +   I   +R+   D+      +M 
Sbjct: 327 YNTIITAFCKANRTGSAYKLFEEMRNKGTVPDLVTFTILINAFLREGSSDIVKKLLDQMT 386

Query: 272 PQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLDFLCGE 93
             G       Y+  +  LC    K  N +    +  +M + G  PD+ ++N  ++ L   
Sbjct: 387 AMGLLPDRIFYTTIVDHLC----KSGNIEMAYSVFSEMLEKGITPDVISYNALINGLLKA 442

Query: 92  SRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           S+V  AM ++ +M  +G + D VT+ ++I
Sbjct: 443 SKVSDAMNLYEEMQTRGCSADEVTFKLII 471


>ref|XP_008221931.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Prunus mume]
          Length = 527

 Score =  225 bits (574), Expect = 2e-56
 Identities = 108/160 (67%), Positives = 132/160 (82%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MY SLGV RL++R+RI YYVK G I+QA+Q+FDEMT S CRVFSIDYNRFIGVLVR SR+
Sbjct: 1   MYRSLGVNRLIFRSRIVYYVKTGLIDQALQVFDEMTRSDCRVFSIDYNRFIGVLVRHSRY 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA++YY +M+PQGFSL+ FTYSRFIS LC    K  NF  ++KL++DMD+LG  PDIWA
Sbjct: 61  DLAEHYYYEMVPQGFSLSAFTYSRFISGLC----KIRNFTLIEKLIRDMDRLGAVPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FNIYL+ LC E+R   A++VF +MV+KGR PDVV+YTILI
Sbjct: 117 FNIYLNLLCQENRAHFALEVFHRMVDKGREPDVVSYTILI 156



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 40/149 (26%), Positives = 68/149 (45%)
 Frame = -3

Query: 452 YRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYCKMI 273
           Y T I+ + +A    +A +LF+EM         + +   I   +R+   D+A+    +M 
Sbjct: 327 YNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLREGSSDIANKLLDQMT 386

Query: 272 PQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLDFLCGE 93
             G       Y+  +  LC  G     +     +  DM + G  PD  +FN  ++ LC  
Sbjct: 387 VMGLLPDRIFYTTIVDHLCKSGKIAMAYS----VFSDMLEKGIAPDAVSFNALINGLCKA 442

Query: 92  SRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           SRV  AM ++ +M  +G  PD VT+ ++I
Sbjct: 443 SRVSEAMHLYEEMQNRGCCPDEVTFKLII 471



 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 37/117 (31%), Positives = 54/117 (46%)
 Frame = -3

Query: 353 IDYNRFIGVLVRQSRFDLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDK 174
           + YN  I    R  R   A   + +M  +G      T++  I A    GS     D  +K
Sbjct: 325 VSYNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLREGSS----DIANK 380

Query: 173 LLKDMDKLGYFPDIWAFNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILIH 3
           LL  M  +G  PD   +   +D LC   ++ +A  VF  M+EKG APD V++  LI+
Sbjct: 381 LLDQMTVMGLLPDRIFYTTIVDHLCKSGKIAMAYSVFSDMLEKGIAPDAVSFNALIN 437


>ref|XP_007044848.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|590695292|ref|XP_007044849.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|590695295|ref|XP_007044850.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|590695299|ref|XP_007044851.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508708783|gb|EOY00680.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508708784|gb|EOY00681.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508708785|gb|EOY00682.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508708786|gb|EOY00683.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao]
          Length = 516

 Score =  225 bits (574), Expect = 2e-56
 Identities = 107/160 (66%), Positives = 127/160 (79%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MYH+LG  RL+YR  IS  VK G  NQA+ +FD+MT S CRVF +DYNRFIGVL+R SRF
Sbjct: 1   MYHALGAPRLIYRAHISRLVKNGLTNQAISMFDQMTQSDCRVFGLDYNRFIGVLLRDSRF 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA+YYY +M PQGFSLTPFTYSRFISALC V     NF+ ++ LL DMDKL Y PDIWA
Sbjct: 61  DLAEYYYFQMFPQGFSLTPFTYSRFISALCPV----KNFNFIELLLNDMDKLNYVPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FNIYL+ LC E ++ELA++VF  +V+KGR PDVVTYTI+I
Sbjct: 117 FNIYLNLLCREKKIELALEVFHSLVKKGRDPDVVTYTIMI 156



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 37/149 (24%), Positives = 66/149 (44%)
 Frame = -3

Query: 452 YRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYCKMI 273
           + T I  + K G I +A +LF+EM         + +   I   + +   D+A     +M 
Sbjct: 328 HNTIIKAFCKGGHIGKAYKLFEEMGRKGIAPDVVTFTTLIKACLTEGSSDIAKALLDRMS 387

Query: 272 PQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLDFLCGE 93
             G       Y+  I  LC    K    +    +  DM K G  PD+ ++N  ++  C  
Sbjct: 388 GMGLLPDCIFYTAIIDHLC----KNGKVEMAHSVFDDMIKQGVNPDVVSYNALINGFCKS 443

Query: 92  SRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           +R   A+ ++ +M  +G +PD VT+ ++I
Sbjct: 444 NRASEAIHLYEEMQTRGFSPDEVTFKLII 472


>ref|XP_007227261.1| hypothetical protein PRUPE_ppa017811mg [Prunus persica]
           gi|462424197|gb|EMJ28460.1| hypothetical protein
           PRUPE_ppa017811mg [Prunus persica]
          Length = 541

 Score =  225 bits (574), Expect = 2e-56
 Identities = 108/160 (67%), Positives = 132/160 (82%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MY SLGV RL++R+RI YYVK G I+QA+Q+FDEMT S CRVFSIDYNRFIGVLVR SR+
Sbjct: 1   MYRSLGVNRLIFRSRIVYYVKTGLIDQALQVFDEMTRSDCRVFSIDYNRFIGVLVRHSRY 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA++YY +M+PQGFSL+ FTYSRFIS LC    K  NF  ++KL++DMD+LG  PDIWA
Sbjct: 61  DLAEHYYYEMVPQGFSLSAFTYSRFISGLC----KIRNFTLIEKLIRDMDRLGAVPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FNIYL+ LC E+R   A++VF +MV+KGR PDVV+YTILI
Sbjct: 117 FNIYLNLLCQENRAHFALEVFHRMVDKGREPDVVSYTILI 156



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 40/149 (26%), Positives = 68/149 (45%)
 Frame = -3

Query: 452 YRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYCKMI 273
           Y T I+ + +A    +A +LF+EM         + +   I   +R+   D+A+    +M 
Sbjct: 327 YNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLREGSSDIANKLLDQMT 386

Query: 272 PQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLDFLCGE 93
             G       Y+  +  LC  G     +     +  DM + G  PD  +FN  ++ LC  
Sbjct: 387 VMGLLPDRIFYTTIVDHLCKSGKIAMAYS----VFSDMLEKGIAPDAVSFNALINGLCKA 442

Query: 92  SRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           SRV  AM ++ +M  +G  PD VT+ ++I
Sbjct: 443 SRVSEAMHLYEEMQNRGCCPDEVTFKLII 471



 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 37/117 (31%), Positives = 54/117 (46%)
 Frame = -3

Query: 353 IDYNRFIGVLVRQSRFDLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDK 174
           + YN  I    R  R   A   + +M  +G      T++  I A    GS     D  +K
Sbjct: 325 VSYNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLREGSS----DIANK 380

Query: 173 LLKDMDKLGYFPDIWAFNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILIH 3
           LL  M  +G  PD   +   +D LC   ++ +A  VF  M+EKG APD V++  LI+
Sbjct: 381 LLDQMTVMGLLPDRIFYTTIVDHLCKSGKIAMAYSVFSDMLEKGIAPDAVSFNALIN 437


>ref|XP_008340122.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Malus domestica]
          Length = 515

 Score =  224 bits (571), Expect = 4e-56
 Identities = 104/160 (65%), Positives = 134/160 (83%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MY SLGV RL+YR+RI+YYVK G I+QA+Q+FDEMT+S CRVFS+DYNRFIGVLV+ SR+
Sbjct: 1   MYRSLGVHRLIYRSRIAYYVKTGLIDQALQVFDEMTHSDCRVFSVDYNRFIGVLVKHSRY 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA++YY +M+P+GFSL PFTYSRFIS LC    K  NF  ++KLL+DMD++G  PDIWA
Sbjct: 61  DLAEHYYYEMVPKGFSLDPFTYSRFISGLC----KIRNFTLIEKLLRDMDRIGALPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FNIYL+ LC E+  + A+++F +MV+KGR PDVV+YTI+I
Sbjct: 117 FNIYLNLLCQENGTDFALELFHRMVDKGREPDVVSYTIII 156



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 39/117 (33%), Positives = 57/117 (48%)
 Frame = -3

Query: 353 IDYNRFIGVLVRQSRFDLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDK 174
           + YN  I    + SR   A   + +M  +G      T++  I+A    GS     D V K
Sbjct: 325 VSYNTIITAFCKASRTGSAYKLFEEMRHKGTVPDLVTFTILINAFLREGSS----DIVKK 380

Query: 173 LLKDMDKLGYFPDIWAFNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILIH 3
           LL  M  +G  PD   +   +D LC    +E+A  VF +M+EKG  PDV++Y  LI+
Sbjct: 381 LLDQMTAMGLLPDRIFYTTIVDHLCKSGNIEMACSVFSEMLEKGITPDVISYNALIN 437


>ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Fragaria vesca subsp. vesca]
           gi|764644943|ref|XP_011457417.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Fragaria vesca subsp. vesca]
           gi|764644946|ref|XP_011457418.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Fragaria vesca subsp. vesca]
          Length = 516

 Score =  223 bits (567), Expect = 1e-55
 Identities = 104/162 (64%), Positives = 134/162 (82%), Gaps = 1/162 (0%)
 Frame = -3

Query: 485 MYHS-LGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSR 309
           MYH+ LG  RL+YR+R+++YVK G I+ A+ +FDEMT S+CRVFS+DYNRFIGVLV+ SR
Sbjct: 1   MYHTTLGAHRLIYRSRMTHYVKTGLIDHALHVFDEMTQSNCRVFSVDYNRFIGVLVKHSR 60

Query: 308 FDLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIW 129
           +DLA++YY +M PQGFSLTPFTYSRFIS LC V    +NF  ++KLL+DMD+LG  PDIW
Sbjct: 61  YDLAEHYYYEMAPQGFSLTPFTYSRFISGLCNV----NNFTLIEKLLRDMDRLGSVPDIW 116

Query: 128 AFNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILIH 3
           AFNIYL+ LC E+R+  A++VF +M +KGR PDVV+YTI+IH
Sbjct: 117 AFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYTIVIH 158


>ref|XP_008389736.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Malus domestica]
           gi|657994846|ref|XP_008389737.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Malus domestica]
           gi|657994848|ref|XP_008389739.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Malus domestica]
          Length = 515

 Score =  221 bits (562), Expect = 4e-55
 Identities = 103/160 (64%), Positives = 132/160 (82%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MY SLGV RL+YR+RI YYVK G I+QA+Q+FDEMT+S CRVFS+DYNRFIGVLV+ SR+
Sbjct: 1   MYRSLGVHRLIYRSRIVYYVKTGLIDQALQVFDEMTHSDCRVFSVDYNRFIGVLVKHSRY 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA++YY +M+P+GFSL PFTYSRFIS LC    K  NF  ++KLL+DMD++G  PDIWA
Sbjct: 61  DLAEHYYYEMVPKGFSLDPFTYSRFISGLC----KIRNFTLIEKLLRDMDRIGALPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FNIYL+ LC E R++ A+++  +MV+KGR PD V+YTI+I
Sbjct: 117 FNIYLNLLCQEDRMDFALELLHRMVDKGREPDGVSYTIII 156



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 40/158 (25%), Positives = 72/158 (45%)
 Frame = -3

Query: 476 SLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLA 297
           S+    L+Y   IS + +AG I++A  +   M  + C    + +N  +     Q   + A
Sbjct: 214 SVNFSSLIYNALISGFCRAGRIDKAQAIKSFMKRNGCEPDLVTHNVLLNYCCNQFMLEEA 273

Query: 296 DYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNI 117
           +    KM   G     ++Y++ +  LC V       D    L++   +     ++ ++N 
Sbjct: 274 EKLMKKMERGGMEPDVYSYNQLLMGLCKVNRP----DKAYLLMRTRMEPKGLCNVVSYNT 329

Query: 116 YLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILIH 3
            +   C  SR   A ++F +M  KG  PD+VT+TILI+
Sbjct: 330 IITSFCKASRTRSAYKLFEEMRHKGTVPDLVTFTILIN 367


>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|731372614|ref|XP_010650646.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|731372618|ref|XP_010650652.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|731372622|ref|XP_010650660.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|731372628|ref|XP_010650672.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|296081374|emb|CBI16807.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  220 bits (560), Expect = 8e-55
 Identities = 109/161 (67%), Positives = 131/161 (81%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MY SLG  RL YR +IS YVKAG I+QA++ FDEMT S+CRVFSIDYNRFIGVLVRQSRF
Sbjct: 1   MYRSLGRHRLAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRF 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA+ YY +MIPQGFSL  FTYSRFIS LC V     NF  ++KLL+DMD+LGY PDIWA
Sbjct: 61  DLAEQYYDRMIPQGFSLNSFTYSRFISGLCKV----KNFVLIEKLLEDMDRLGYVPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILIH 3
           +NIYL+ LC E+++++A+ V   MVEKGR PD+VTYTI+I+
Sbjct: 117 YNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVIN 157


>ref|XP_012460314.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Gossypium raimondii]
           gi|823255319|ref|XP_012460315.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Gossypium raimondii]
           gi|823255321|ref|XP_012460316.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Gossypium raimondii]
           gi|763811129|gb|KJB78031.1| hypothetical protein
           B456_012G173300 [Gossypium raimondii]
          Length = 516

 Score =  219 bits (559), Expect = 1e-54
 Identities = 108/160 (67%), Positives = 124/160 (77%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MYH+LG  RL+YR RIS +VK G I+QAV LFDEM  S CRVF IDYNRFIGVL+R S F
Sbjct: 1   MYHALGTTRLIYRARISRFVKTGLIDQAVHLFDEMAQSDCRVFGIDYNRFIGVLIRHSLF 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA+ YY +M PQGFSLTPFTYSRFIS LCTV     NF  ++ LL DMDKL Y PDIWA
Sbjct: 61  DLAERYYFQMFPQGFSLTPFTYSRFISGLCTV----KNFSLIELLLDDMDKLNYVPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FN+YL+ L  E +VELA++VF  + EKGR PDVVTYTI+I
Sbjct: 117 FNVYLNLLFKEKKVELALEVFYSVAEKGRDPDVVTYTIMI 156



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
 Frame = -3

Query: 452 YRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYCKMI 273
           Y T I  + K G + +A +LF+EM           Y   I   + +   D+A      M 
Sbjct: 328 YNTIIKAFCKGGHVRKAYKLFEEMGRKGISPDVATYTTLIKACLNEGNSDVAKALIDHM- 386

Query: 272 PQGFSLTP--FTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLDFLC 99
             G  L P    Y+  I  LC    K    +    +  DM   G  PD+ ++N  ++  C
Sbjct: 387 -SGMRLLPDQIFYTTIIDHLC----KSGKVERACGIFNDMIMQGVNPDVISYNALINGFC 441

Query: 98  GESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
             +RV  A+Q++ +M  KG +PD  TY ++I
Sbjct: 442 KSNRVNEALQLYEEMQTKGFSPDETTYKLII 472



 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
 Frame = -3

Query: 458 LLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYCK 279
           LL+   I+ + K   I++A  +   MT + C+   + YN  +     +   + A+    K
Sbjct: 221 LLFNALINGFCKMRRIDKAQAIKSFMTKNGCQPDLVTYNILLNYCCNELMLEEAEKLMKK 280

Query: 278 MIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDK----LLKDMDKLGYFPDIWAFNIYL 111
           M   G     ++Y++ I  LC       N D +DK    ++  M+  G   D  ++N  +
Sbjct: 281 MERNGMGPDVYSYNQMIKGLC-------NADRLDKAYFLMVNKMEPKG-LADAVSYNTII 332

Query: 110 DFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
              C    V  A ++F +M  KG +PDV TYT LI
Sbjct: 333 KAFCKGGHVRKAYKLFEEMGRKGISPDVATYTTLI 367


>ref|XP_012085508.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Jatropha curcas]
           gi|802723209|ref|XP_012085509.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Jatropha curcas]
           gi|802723212|ref|XP_012085510.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Jatropha curcas]
           gi|643714012|gb|KDP26677.1| hypothetical protein
           JCGZ_17835 [Jatropha curcas]
          Length = 517

 Score =  218 bits (556), Expect = 2e-54
 Identities = 107/160 (66%), Positives = 128/160 (80%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MYHSLG  RL+YR+RI+ YVK G I++A+Q+FDEMT S+CRVFSIDYNRFIG+L+  SRF
Sbjct: 1   MYHSLGAHRLIYRSRIAGYVKLGLIDKAIQVFDEMTQSNCRVFSIDYNRFIGILIHHSRF 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA +YY KM P GFSL+PFTYSRFISALC V     NF  +D+LL DM++L   PDIWA
Sbjct: 61  DLAHHYYSKMGPLGFSLSPFTYSRFISALCQV----KNFKLIDELLNDMERLSCVPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
            NIYL+ L  E R+ELA+ VF KMVE+GR PDVVTYTI+I
Sbjct: 117 LNIYLNLLFLEGRIELALNVFEKMVERGRMPDVVTYTIII 156



 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 39/145 (26%), Positives = 67/145 (46%)
 Frame = -3

Query: 440 ISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYCKMIPQGF 261
           +  +++ G  + A +L D+MT        I Y   IG L +  +  LA   +C M+ QG 
Sbjct: 367 VEAFLREGSSDIAKKLLDQMTKMGISPDRIFYTTIIGHLCKSGKIGLAHTIFCDMVEQGI 426

Query: 260 SLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLDFLCGESRVE 81
                + +  I+  C    K        +L ++M   G +PD   +N+ +  L  E ++ 
Sbjct: 427 PPDVISCNALINGFC----KSFRVSEAMQLYEEMQSRGPYPDEVTYNLIIRGLIVEKKLS 482

Query: 80  LAMQVFGKMVEKGRAPDVVTYTILI 6
           +A +V+G+M+EKG   D     ILI
Sbjct: 483 VASRVWGQMMEKGFTLDRANSEILI 507



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 40/149 (26%), Positives = 67/149 (44%)
 Frame = -3

Query: 452 YRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYCKMI 273
           Y T I  + K     +A ++F+EM  +      + +   +   +R+   D+A     +M 
Sbjct: 328 YDTIIKAFCKRSDTRRAYKIFEEMGRNGILPDVVTFTILVEAFLREGSSDIAKKLLDQMT 387

Query: 272 PQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLDFLCGE 93
             G S     Y+  I  LC  G  +    H   +  DM + G  PD+ + N  ++  C  
Sbjct: 388 KMGISPDRIFYTTIIGHLCKSG--KIGLAHT--IFCDMVEQGIPPDVISCNALINGFCKS 443

Query: 92  SRVELAMQVFGKMVEKGRAPDVVTYTILI 6
            RV  AMQ++ +M  +G  PD VTY ++I
Sbjct: 444 FRVSEAMQLYEEMQSRGPYPDEVTYNLII 472


>ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568860947|ref|XP_006483973.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 517

 Score =  214 bits (544), Expect = 5e-53
 Identities = 107/160 (66%), Positives = 125/160 (78%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           M   LG QRL+YR +IS  VKAG I+QAV +FDEMT S+CRVFSIDYNRFIGVL+R SRF
Sbjct: 1   MIQKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRF 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DL  +YY +M P GFSLTPFTYSRFIS LC V     NF  ++ LL +MDKLGY PDIWA
Sbjct: 61  DLVQFYYQQMHPLGFSLTPFTYSRFISGLCEV----KNFTLINILLDNMDKLGYLPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FNIYL+ L  E+R++LA++VF KMV KGR PD VTYTI+I
Sbjct: 117 FNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVI 156



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
 Frame = -3

Query: 461 RLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYC 282
           ++ Y T I  + K G   +A +LF+EM      +  + +   I   +R+    +A+    
Sbjct: 324 KVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLN 383

Query: 281 KMIPQGFSLTP--FTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLD 108
           +M  +G +L+P    Y+  I  LC    K         +  DM + G  PD+ ++N  ++
Sbjct: 384 QM--RGMNLSPDRILYTTIIDCLC----KSREIGTAYGVFLDMVEQGITPDVISYNALIN 437

Query: 107 FLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
            LC  SRV  AM ++ +M  +G  PD VT+ +LI
Sbjct: 438 GLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLI 471


>ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citrus clementina]
           gi|557540418|gb|ESR51462.1| hypothetical protein
           CICLE_v10031251mg [Citrus clementina]
          Length = 517

 Score =  214 bits (544), Expect = 5e-53
 Identities = 107/160 (66%), Positives = 125/160 (78%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           M   LG QRL+YR +IS  VKAG I+QAV +FDEMT S+CRVFSIDYNRFIGVL+R SRF
Sbjct: 1   MIQKLGAQRLIYRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRF 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DL  +YY +M P GFSLTPFTYSRFIS LC V     NF  ++ LL +MDKLGY PDIWA
Sbjct: 61  DLVQFYYQQMHPLGFSLTPFTYSRFISGLCEV----KNFTLINILLDNMDKLGYLPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FNIYL+ L  E+R++LA++VF KMV KGR PD VTYTI+I
Sbjct: 117 FNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVI 156



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
 Frame = -3

Query: 461 RLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYC 282
           ++ Y T I  + K G   +A +LF+EM      +  + +   I   +R+    +A+    
Sbjct: 324 KVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLN 383

Query: 281 KMIPQGFSLTP--FTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLD 108
           +M  +G +L+P    Y+  I  LC    K         +  DM + G  PD+ ++N  ++
Sbjct: 384 QM--RGMNLSPDRILYTTIIDCLC----KSREIGTAYGVFLDMVEQGITPDVISYNALIN 437

Query: 107 FLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
            LC  SRV  AM ++ +M  +G  PD VT+ +LI
Sbjct: 438 GLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLI 471


>ref|XP_002312667.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222852487|gb|EEE90034.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 512

 Score =  212 bits (540), Expect = 2e-52
 Identities = 106/160 (66%), Positives = 125/160 (78%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MY  LGV RL+YRTRI+ YVKAG I+ AV++FDEMT S CRVF IDYNRFIGVL+R SRF
Sbjct: 1   MYQPLGVHRLIYRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRF 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA +YY KM P GFSL+ FTYSRFIS LC    +   F  +D LLKDM+KL   PDIWA
Sbjct: 61  DLAHHYYSKMAPLGFSLSSFTYSRFISGLC----QTKEFTFIDNLLKDMEKLHCVPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FNIYL+ L  E+R E A++VFG+MVE+GR PDVVT+TI+I
Sbjct: 117 FNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIII 156



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
 Frame = -3

Query: 467 VQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYY 288
           V  L+Y   IS + +AG I++A+ +   M+ + C+   + YN  +     +  F+ A   
Sbjct: 218 VSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKL 277

Query: 287 YCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDK----LLKDMDKLGYFPDIWAFN 120
             KM         ++Y++ + A C         +H DK    ++  M   G F D+ ++N
Sbjct: 278 LKKMECSAIEPDVYSYNQLLKAHCKA-------NHPDKAYLFMVTKMVPKG-FCDVVSYN 329

Query: 119 IYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
             +   C  S    A ++F +M  KG APDVVT+TILI
Sbjct: 330 TIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILI 367


>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  208 bits (530), Expect = 2e-51
 Identities = 102/161 (63%), Positives = 127/161 (78%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MY SLG  RL+YR+RI+ YVKAG I++AVQ+FDEM+ S+CRVFSIDYNRFIGVL+  SRF
Sbjct: 1   MYQSLGAHRLIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRF 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA++YY +M  +GFSL+ FTYSRFI+ LC V     NF  +D+LL DM+ L   PDIWA
Sbjct: 61  DLANHYYSQMGTRGFSLSSFTYSRFITGLCKV----KNFTFIDELLHDMETLNCLPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILIH 3
           FNIYL  L  E R++LA++VF K+V+ GR PDVVTYTI+IH
Sbjct: 117 FNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIH 157



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 43/149 (28%), Positives = 67/149 (44%)
 Frame = -3

Query: 452 YRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYCKMI 273
           Y T I  + K G    A +LF+EM         + +  FI   + +  F++A     +M 
Sbjct: 328 YNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMT 387

Query: 272 PQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLDFLCGE 93
             G S     Y+  I  LC    K    +    +  DM + G  PD+ +FN  ++  C  
Sbjct: 388 EMGLSPDCIFYTTIIDHLC----KSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKC 443

Query: 92  SRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           SRV  AM ++ +M  +G  PD VTY ++I
Sbjct: 444 SRVSEAMHLYEEMQNRGSYPDEVTYKLII 472



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 35/133 (26%), Positives = 62/133 (46%)
 Frame = -3

Query: 440 ISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYCKMIPQGF 261
           I  ++  G  N A +L D+MT        I Y   I  L +  + ++A   +C M+ QG 
Sbjct: 367 IKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGI 426

Query: 260 SLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLDFLCGESRVE 81
           S    +++  I+  C    K S       L ++M   G +PD   + + +  L  E ++ 
Sbjct: 427 SPDVISFNALINGFC----KCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKIS 482

Query: 80  LAMQVFGKMVEKG 42
           +A  V+G+M++KG
Sbjct: 483 IACMVWGQMMDKG 495



 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 36/117 (30%), Positives = 57/117 (48%)
 Frame = -3

Query: 353 IDYNRFIGVLVRQSRFDLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDK 174
           + YN  I    +      A   + +M  +G      T++ FI A    GS    F+   K
Sbjct: 326 VSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGS----FNIAKK 381

Query: 173 LLKDMDKLGYFPDIWAFNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILIH 3
           LL  M ++G  PD   +   +D LC   +VE+A  +F  MVE+G +PDV+++  LI+
Sbjct: 382 LLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALIN 438


>ref|XP_011034038.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Populus euphratica]
           gi|743872079|ref|XP_011034039.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Populus euphratica]
           gi|743872083|ref|XP_011034040.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Populus euphratica]
           gi|743872087|ref|XP_011034041.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Populus euphratica]
          Length = 512

 Score =  208 bits (529), Expect = 3e-51
 Identities = 104/160 (65%), Positives = 125/160 (78%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MY  LGV RL+YRTRI+ +VKAG I+ AV++FDEMT S CRVF IDYNRFIGVL+R SRF
Sbjct: 1   MYQPLGVHRLIYRTRIASFVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRF 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA +YY KM P GFSL+ FTYSRFIS LC    + + F  +D LLKDM+KL   PDIWA
Sbjct: 61  DLAHHYYSKMAPLGFSLSSFTYSRFISGLC----QTNEFTFIDNLLKDMEKLHCVPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FNIYL+ L  E+R E A++VF +MVE+GR PDVVT+TI+I
Sbjct: 117 FNIYLNLLFRENREESALEVFRRMVERGREPDVVTFTIII 156



 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
 Frame = -3

Query: 467 VQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYY 288
           V  L+Y   IS + +AG I++A+ +   M+ + C+   + YN  +     +  F+ A   
Sbjct: 218 VSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAMKL 277

Query: 287 YCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDK----LLKDMDKLGYFPDIWAFN 120
             KM         ++Y++ + A C         +H DK    ++  M   G F D+ ++N
Sbjct: 278 LKKMECSAIEPDVYSYNQLLKAHCKA-------NHPDKAYLFMVTKMVPKG-FCDVVSYN 329

Query: 119 IYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
             +   C  S    A ++F +M  KG APDVVT+TILI
Sbjct: 330 TIIKAFCSISDNRRAYKLFEEMGRKGIAPDVVTFTILI 367


>ref|XP_013446721.1| PPR containing plant-like protein [Medicago truncatula]
           gi|657375426|gb|KEH20748.1| PPR containing plant-like
           protein [Medicago truncatula]
          Length = 515

 Score =  208 bits (529), Expect = 3e-51
 Identities = 103/161 (63%), Positives = 129/161 (80%), Gaps = 1/161 (0%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MYHS+  +RLLYR+ ISYYVK+G I+ A+QLFDEM+ S+CR+FSIDYNRFIGVL+R S  
Sbjct: 1   MYHSVAARRLLYRSTISYYVKSGLIDTAIQLFDEMSQSNCRLFSIDYNRFIGVLLRHSHL 60

Query: 305 DLAD-YYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIW 129
           +LA+ YY+  +IP GFSLTPFTYSRFI+ALC+V     NF  ++ LL+DMD LG  PDIW
Sbjct: 61  NLAENYYHHHVIPNGFSLTPFTYSRFITALCSV----KNFLLIESLLRDMDDLGIVPDIW 116

Query: 128 AFNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           AFNIYL+ LC E+R+E A+Q+F  M  KGR PDVV+YTI+I
Sbjct: 117 AFNIYLNILCRENRLETALQLFQTMPLKGRKPDVVSYTIII 157


>ref|XP_008446139.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Cucumis melo]
           gi|659090673|ref|XP_008446141.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Cucumis melo]
          Length = 514

 Score =  204 bits (520), Expect = 3e-50
 Identities = 99/160 (61%), Positives = 124/160 (77%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MYH LG  RL++R  I+  VK G I++A+++FDEMT S C V S DYNRFIGVL+ +SRF
Sbjct: 1   MYHRLGANRLVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRF 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA+ YY +MIPQGFSLTPFTYSRFISALC +     NF  + +LL+DM KLGY PDIWA
Sbjct: 61  DLAESYYSRMIPQGFSLTPFTYSRFISALCEI----KNFGLIGRLLEDMKKLGYLPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FNIYL+ L  E+ +ELA++ + +MV KGR PDVVTYTI++
Sbjct: 117 FNIYLNLLFRENLLELALEFYDEMVAKGREPDVVTYTIIV 156


>ref|XP_012572260.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Cicer arietinum]
          Length = 516

 Score =  204 bits (519), Expect = 4e-50
 Identities = 100/162 (61%), Positives = 128/162 (79%), Gaps = 1/162 (0%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MYHS+  +RLLYR++ISYYVKAG I+ A++LFDEM+ ++ R FSIDYNRFIGVL+R S  
Sbjct: 1   MYHSVAARRLLYRSQISYYVKAGLIDTAIKLFDEMSQTNSRPFSIDYNRFIGVLIRHSHL 60

Query: 305 DLADYYYCK-MIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIW 129
           DLA  YY + +IP GFSLTPFTYSRFI+ALC+V     NF  +D LL+DMD LG+ PDIW
Sbjct: 61  DLAQSYYRRHVIPNGFSLTPFTYSRFIAALCSV----KNFSLIDYLLRDMDALGFVPDIW 116

Query: 128 AFNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILIH 3
           AFNIYL+ LC E+++E A+Q+F  M  KGR PDVV+Y I+++
Sbjct: 117 AFNIYLNLLCRENQLETALQLFRTMPLKGREPDVVSYNIIVN 158



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 40/149 (26%), Positives = 68/149 (45%)
 Frame = -3

Query: 452 YRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYCKMI 273
           Y T I+ + KA  I +  +LF+EM     +   I +   I    ++   D+A     +M 
Sbjct: 328 YNTIIAAFCKARRIERGYELFEEMRRKGIQPDVITFTVLIEAFFKEGGSDVAKKLLDQMT 387

Query: 272 PQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLDFLCGE 93
             G       Y+  +  LC    K    D    +  DM + G  PD+ ++N  ++  C  
Sbjct: 388 TMGIVPDLIFYTTIVDRLC----KAWKVDIAHGVFCDMVENGVSPDVVSYNALINGFCKA 443

Query: 92  SRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           SRV  AM ++ +M +KG  PD VT+ +++
Sbjct: 444 SRVMDAMCLYDEMQDKGLYPDGVTFKLIV 472



 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 40/150 (26%), Positives = 65/150 (43%)
 Frame = -3

Query: 452 YRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRFDLADYYYCKMI 273
           Y   +  + KA  +++A     +   +      + YN  I    +  R +     + +M 
Sbjct: 293 YNELLKGFCKANQVDRAYLTMVKRMQTKGMCDVVSYNTIIAAFCKARRIERGYELFEEMR 352

Query: 272 PQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWAFNIYLDFLCGE 93
            +G      T++  I A    G      D   KLL  M  +G  PD+  +   +D LC  
Sbjct: 353 RKGIQPDVITFTVLIEAFFKEGGS----DVAKKLLDQMTTMGIVPDLIFYTTIVDRLCKA 408

Query: 92  SRVELAMQVFGKMVEKGRAPDVVTYTILIH 3
            +V++A  VF  MVE G +PDVV+Y  LI+
Sbjct: 409 WKVDIAHGVFCDMVENGVSPDVVSYNALIN 438


>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Cucumis sativus]
           gi|700196563|gb|KGN51740.1| hypothetical protein
           Csa_5G597500 [Cucumis sativus]
          Length = 514

 Score =  204 bits (518), Expect = 6e-50
 Identities = 99/160 (61%), Positives = 124/160 (77%)
 Frame = -3

Query: 485 MYHSLGVQRLLYRTRISYYVKAGFINQAVQLFDEMTNSSCRVFSIDYNRFIGVLVRQSRF 306
           MYH LG  RL++R  I+  VK G I++A+++FDEMT S C V S DYNRFIGVL+ +SRF
Sbjct: 1   MYHRLGANRLVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRF 60

Query: 305 DLADYYYCKMIPQGFSLTPFTYSRFISALCTVGSKRSNFDHVDKLLKDMDKLGYFPDIWA 126
           DLA+ YY +MIPQGFSLTPFTYSRFISALC +     NF  + +LL+DM +LGY PDIWA
Sbjct: 61  DLAESYYSRMIPQGFSLTPFTYSRFISALCEI----KNFGLIGRLLEDMKQLGYLPDIWA 116

Query: 125 FNIYLDFLCGESRVELAMQVFGKMVEKGRAPDVVTYTILI 6
           FNIYL+ L  E+ +ELA++ F +MV KGR PDVVTYTI++
Sbjct: 117 FNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIV 156