BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00024487
         (339 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGT45471.1| capsid protein [Chickpea chlorosis virus]               58   3e-06

>gb|AGT45471.1| capsid protein [Chickpea chlorosis virus]
          Length = 254

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/72 (45%), Positives = 43/72 (59%)
 Frame = +3

Query: 120 SSKWGGKVYRRRKWDRASKNRERANQIRALRALGMSSEAELASAMNHVGWPVVSRNRPSL 299
           S ++ GKVYRRRK   A          R  +ALG++S+ EL   +N  G P+    RPSL
Sbjct: 2   SGRYKGKVYRRRKGPNA----------RVYQALGVNSQRELEQLVNQPGRPI-RNGRPSL 50

Query: 300 QVAQFTWTSNKA 335
           QVA+F WT+NKA
Sbjct: 51  QVAEFLWTTNKA 62