BLASTX nr result

ID: Ziziphus21_contig00022913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00022913
         (397 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009374536.1| PREDICTED: cleavage and polyadenylation spec...   255   1e-65
ref|XP_008343710.1| PREDICTED: cleavage and polyadenylation spec...   254   2e-65
ref|XP_008234350.1| PREDICTED: cleavage and polyadenylation spec...   253   5e-65
ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prun...   253   5e-65
ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation spec...   246   5e-63
ref|XP_007038475.1| Cleavage and polyadenylation specificity fac...   245   1e-62
ref|XP_007038474.1| Cleavage and polyadenylation specificity fac...   245   1e-62
ref|XP_007038473.1| Cleavage and polyadenylation specificity fac...   245   1e-62
ref|XP_012090388.1| PREDICTED: cleavage and polyadenylation spec...   243   3e-62
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   241   1e-61
ref|XP_011043709.1| PREDICTED: cleavage and polyadenylation spec...   241   2e-61
ref|XP_012484369.1| PREDICTED: cleavage and polyadenylation spec...   240   3e-61
ref|XP_012484368.1| PREDICTED: cleavage and polyadenylation spec...   240   3e-61
ref|XP_010662375.1| PREDICTED: cleavage and polyadenylation spec...   240   3e-61
emb|CBI24510.3| unnamed protein product [Vitis vinifera]              240   3e-61
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   240   3e-61
ref|XP_002318462.2| cleavage and polyadenylation specificity fac...   240   3e-61
ref|XP_010109097.1| Cleavage and polyadenylation specificity fac...   239   4e-61
gb|KDO65373.1| hypothetical protein CISIN_1g0005452mg, partial [...   238   1e-60
ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation spec...   238   1e-60

>ref|XP_009374536.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X1 [Pyrus x bretschneideri]
            gi|694398760|ref|XP_009374537.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 1 isoform X2
            [Pyrus x bretschneideri]
          Length = 1447

 Score =  255 bits (651), Expect = 1e-65
 Identities = 118/130 (90%), Positives = 126/130 (96%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            RLRVHPQLCDGS+VAFTVLHNVNCNHGLIYVTSQGILKICQLP I+SYD+YWPVQKIPLK
Sbjct: 967  RLRVHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGILKICQLPPISSYDNYWPVQKIPLK 1026

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAEKNLYPLIVSVPVHKPLNQ++SSL+DQE GHQ ENHNLSSD+LHRTYTVD
Sbjct: 1027 GTPHQVTYFAEKNLYPLIVSVPVHKPLNQILSSLVDQEAGHQVENHNLSSDELHRTYTVD 1086

Query: 36   EFEVRILERS 7
            EFEVRI+E S
Sbjct: 1087 EFEVRIMEPS 1096


>ref|XP_008343710.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like isoform X1 [Malus domestica]
            gi|658016721|ref|XP_008343711.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 1-like isoform
            X2 [Malus domestica]
          Length = 1450

 Score =  254 bits (649), Expect = 2e-65
 Identities = 117/128 (91%), Positives = 125/128 (97%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            RLRVHPQLCDGS+VAFTVLHNVNCNHGLIYVTSQGILKICQLP I+SYD+YWPVQKIPLK
Sbjct: 968  RLRVHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGILKICQLPPISSYDNYWPVQKIPLK 1027

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAEKNLYPLIVSVPVHKPLNQ++SSL+DQE GHQ ENHNLSSD+LHRTYTVD
Sbjct: 1028 GTPHQVTYFAEKNLYPLIVSVPVHKPLNQILSSLVDQEAGHQVENHNLSSDELHRTYTVD 1087

Query: 36   EFEVRILE 13
            EFEVRI+E
Sbjct: 1088 EFEVRIME 1095


>ref|XP_008234350.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Prunus mume]
          Length = 1459

 Score =  253 bits (645), Expect = 5e-65
 Identities = 116/128 (90%), Positives = 125/128 (97%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            RLR+HPQLCDGS+VA TVLHNVNCNHGLIYVTSQGILKICQLP ITSYD+YWPVQKIPLK
Sbjct: 970  RLRIHPQLCDGSVVAVTVLHNVNCNHGLIYVTSQGILKICQLPPITSYDNYWPVQKIPLK 1029

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAEKNLYPLIVSVPVHKPLNQV+SSL+DQEVGHQ ENHNLSSD+LHRTY+VD
Sbjct: 1030 GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVLSSLVDQEVGHQVENHNLSSDELHRTYSVD 1089

Query: 36   EFEVRILE 13
            EFE+RI+E
Sbjct: 1090 EFEIRIME 1097


>ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
            gi|462416772|gb|EMJ21509.1| hypothetical protein
            PRUPE_ppa000211mg [Prunus persica]
          Length = 1459

 Score =  253 bits (645), Expect = 5e-65
 Identities = 116/128 (90%), Positives = 125/128 (97%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            RLR+HPQLCDGS+VA TVLHNVNCNHGLIYVTSQGILKICQLP ITSYD+YWPVQKIPLK
Sbjct: 970  RLRIHPQLCDGSVVAVTVLHNVNCNHGLIYVTSQGILKICQLPPITSYDNYWPVQKIPLK 1029

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAEKNLYPLIVSVPVHKPLNQV+SSL+DQEVGHQ ENHNLSSD+LHRTY+VD
Sbjct: 1030 GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVLSSLVDQEVGHQVENHNLSSDELHRTYSVD 1089

Query: 36   EFEVRILE 13
            EFE+RI+E
Sbjct: 1090 EFEIRIME 1097


>ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Fragaria vesca subsp. vesca]
          Length = 1439

 Score =  246 bits (628), Expect = 5e-63
 Identities = 113/128 (88%), Positives = 123/128 (96%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            R+RVHPQLCDGSIVAFTVLHNVNCNHGLIYVTS+GI+KICQLPSITSYD+YWPVQKIPLK
Sbjct: 950  RIRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSEGIMKICQLPSITSYDNYWPVQKIPLK 1009

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAEKNLYPLIVS+PV KPLNQV+SSL+DQE  HQ ENHNLS ++LHRTYTVD
Sbjct: 1010 GTPHQVTYFAEKNLYPLIVSIPVQKPLNQVLSSLVDQEFSHQVENHNLSPEELHRTYTVD 1069

Query: 36   EFEVRILE 13
            EFEVRI+E
Sbjct: 1070 EFEVRIME 1077


>ref|XP_007038475.1| Cleavage and polyadenylation specificity factor subunit 1 isoform 3
            [Theobroma cacao] gi|508775720|gb|EOY22976.1| Cleavage
            and polyadenylation specificity factor subunit 1 isoform
            3 [Theobroma cacao]
          Length = 1195

 Score =  245 bits (625), Expect = 1e-62
 Identities = 112/128 (87%), Positives = 124/128 (96%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            RLRVHPQLCDGSIVAFTVLHNVNCNHG IYVTSQGILKICQ+PS ++YD+YWPVQKIPL+
Sbjct: 768  RLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQIPSASNYDNYWPVQKIPLR 827

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAE+NLYP+IVSVPVHKP+NQV+SSL+DQEVGHQ +NHNLSSD+L RTYTVD
Sbjct: 828  GTPHQVTYFAERNLYPIIVSVPVHKPVNQVLSSLVDQEVGHQMDNHNLSSDELQRTYTVD 887

Query: 36   EFEVRILE 13
            EFEVRILE
Sbjct: 888  EFEVRILE 895


>ref|XP_007038474.1| Cleavage and polyadenylation specificity factor 160 isoform 2
            [Theobroma cacao] gi|508775719|gb|EOY22975.1| Cleavage
            and polyadenylation specificity factor 160 isoform 2
            [Theobroma cacao]
          Length = 1257

 Score =  245 bits (625), Expect = 1e-62
 Identities = 112/128 (87%), Positives = 124/128 (96%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            RLRVHPQLCDGSIVAFTVLHNVNCNHG IYVTSQGILKICQ+PS ++YD+YWPVQKIPL+
Sbjct: 768  RLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQIPSASNYDNYWPVQKIPLR 827

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAE+NLYP+IVSVPVHKP+NQV+SSL+DQEVGHQ +NHNLSSD+L RTYTVD
Sbjct: 828  GTPHQVTYFAERNLYPIIVSVPVHKPVNQVLSSLVDQEVGHQMDNHNLSSDELQRTYTVD 887

Query: 36   EFEVRILE 13
            EFEVRILE
Sbjct: 888  EFEVRILE 895


>ref|XP_007038473.1| Cleavage and polyadenylation specificity factor 160 isoform 1
            [Theobroma cacao] gi|508775718|gb|EOY22974.1| Cleavage
            and polyadenylation specificity factor 160 isoform 1
            [Theobroma cacao]
          Length = 1457

 Score =  245 bits (625), Expect = 1e-62
 Identities = 112/128 (87%), Positives = 124/128 (96%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            RLRVHPQLCDGSIVAFTVLHNVNCNHG IYVTSQGILKICQ+PS ++YD+YWPVQKIPL+
Sbjct: 968  RLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQIPSASNYDNYWPVQKIPLR 1027

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAE+NLYP+IVSVPVHKP+NQV+SSL+DQEVGHQ +NHNLSSD+L RTYTVD
Sbjct: 1028 GTPHQVTYFAERNLYPIIVSVPVHKPVNQVLSSLVDQEVGHQMDNHNLSSDELQRTYTVD 1087

Query: 36   EFEVRILE 13
            EFEVRILE
Sbjct: 1088 EFEVRILE 1095


>ref|XP_012090388.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Jatropha curcas] gi|643706250|gb|KDP22382.1|
            hypothetical protein JCGZ_26213 [Jatropha curcas]
          Length = 1456

 Score =  243 bits (621), Expect = 3e-62
 Identities = 112/128 (87%), Positives = 123/128 (96%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            R+RVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQG LKICQLPS++SYD+YWPVQK+PLK
Sbjct: 967  RMRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGNLKICQLPSVSSYDNYWPVQKVPLK 1026

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
             TPHQVTYFAEKNLYPLIVSVPV KP+NQV+SSL+DQE GHQ ENHNLSSD+LHRTY+V+
Sbjct: 1027 ATPHQVTYFAEKNLYPLIVSVPVQKPVNQVLSSLVDQEAGHQIENHNLSSDELHRTYSVE 1086

Query: 36   EFEVRILE 13
            EFEVRILE
Sbjct: 1087 EFEVRILE 1094


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
            and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
          Length = 1461

 Score =  241 bits (616), Expect = 1e-61
 Identities = 113/128 (88%), Positives = 123/128 (96%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQG LKICQLPS ++YD+YWPVQKIPLK
Sbjct: 972  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGNLKICQLPSFSNYDNYWPVQKIPLK 1031

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYF EKNLYPLIVSVPVHKP+NQV+SSL+DQEVGHQ ENHNLSSD+L +TY+V+
Sbjct: 1032 GTPHQVTYFPEKNLYPLIVSVPVHKPVNQVLSSLVDQEVGHQIENHNLSSDELLQTYSVE 1091

Query: 36   EFEVRILE 13
            EFEVRILE
Sbjct: 1092 EFEVRILE 1099


>ref|XP_011043709.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Populus euphratica]
          Length = 1450

 Score =  241 bits (615), Expect = 2e-61
 Identities = 112/130 (86%), Positives = 123/130 (94%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            RLRVHPQLCDGSIVAFTVLH VNCNHGLIYVTSQG LKIC L S++SYD+YWPVQKIPLK
Sbjct: 963  RLRVHPQLCDGSIVAFTVLHTVNCNHGLIYVTSQGNLKICHLSSVSSYDNYWPVQKIPLK 1022

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAE+NLYPLIVSVPV KP+NQV+SSL+DQEVGHQ ENHNLSSD++HRTY+VD
Sbjct: 1023 GTPHQVTYFAERNLYPLIVSVPVQKPVNQVLSSLVDQEVGHQIENHNLSSDEIHRTYSVD 1082

Query: 36   EFEVRILERS 7
            EFE+RILE S
Sbjct: 1083 EFEIRILEPS 1092


>ref|XP_012484369.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X2 [Gossypium raimondii]
          Length = 1349

 Score =  240 bits (613), Expect = 3e-61
 Identities = 109/128 (85%), Positives = 123/128 (96%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            RLR+HPQ+CDGSIVAFTVLHNVNCNHG IYVTSQGILKICQ+PS ++YD+YWPVQKIPL+
Sbjct: 861  RLRIHPQICDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQMPSTSNYDNYWPVQKIPLR 920

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAE+NLYPLIVSVPVHKP+NQV+SSL+DQE GHQ +N NLSSD+LHRTYTV+
Sbjct: 921  GTPHQVTYFAERNLYPLIVSVPVHKPVNQVLSSLVDQEAGHQMDNLNLSSDELHRTYTVE 980

Query: 36   EFEVRILE 13
            EFEVRILE
Sbjct: 981  EFEVRILE 988


>ref|XP_012484368.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X1 [Gossypium raimondii]
            gi|763767219|gb|KJB34434.1| hypothetical protein
            B456_006G065300 [Gossypium raimondii]
          Length = 1456

 Score =  240 bits (613), Expect = 3e-61
 Identities = 109/128 (85%), Positives = 123/128 (96%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            RLR+HPQ+CDGSIVAFTVLHNVNCNHG IYVTSQGILKICQ+PS ++YD+YWPVQKIPL+
Sbjct: 968  RLRIHPQICDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQMPSTSNYDNYWPVQKIPLR 1027

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAE+NLYPLIVSVPVHKP+NQV+SSL+DQE GHQ +N NLSSD+LHRTYTV+
Sbjct: 1028 GTPHQVTYFAERNLYPLIVSVPVHKPVNQVLSSLVDQEAGHQMDNLNLSSDELHRTYTVE 1087

Query: 36   EFEVRILE 13
            EFEVRILE
Sbjct: 1088 EFEVRILE 1095


>ref|XP_010662375.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X2 [Vitis vinifera]
          Length = 1301

 Score =  240 bits (612), Expect = 3e-61
 Identities = 110/128 (85%), Positives = 122/128 (95%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            R+RVHPQLCDGSIVAFTVLHN+NCNHGLIYVTSQG LKICQLP+++SYD+YWPVQKIPLK
Sbjct: 953  RIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGFLKICQLPAVSSYDNYWPVQKIPLK 1012

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAEKNLYPLIVSVPV KPLN V+SSL+DQE GHQ EN NLSSD+LHR+Y+VD
Sbjct: 1013 GTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVDQEAGHQLENDNLSSDELHRSYSVD 1072

Query: 36   EFEVRILE 13
            EFEVR+LE
Sbjct: 1073 EFEVRVLE 1080


>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  240 bits (612), Expect = 3e-61
 Identities = 110/128 (85%), Positives = 122/128 (95%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            R+RVHPQLCDGSIVAFTVLHN+NCNHGLIYVTSQG LKICQLP+++SYD+YWPVQKIPLK
Sbjct: 959  RIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGFLKICQLPAVSSYDNYWPVQKIPLK 1018

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAEKNLYPLIVSVPV KPLN V+SSL+DQE GHQ EN NLSSD+LHR+Y+VD
Sbjct: 1019 GTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVDQEAGHQLENDNLSSDELHRSYSVD 1078

Query: 36   EFEVRILE 13
            EFEVR+LE
Sbjct: 1079 EFEVRVLE 1086


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X1 [Vitis vinifera]
            gi|731423119|ref|XP_010662374.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 1 isoform X1
            [Vitis vinifera]
          Length = 1442

 Score =  240 bits (612), Expect = 3e-61
 Identities = 110/128 (85%), Positives = 122/128 (95%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            R+RVHPQLCDGSIVAFTVLHN+NCNHGLIYVTSQG LKICQLP+++SYD+YWPVQKIPLK
Sbjct: 953  RIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGFLKICQLPAVSSYDNYWPVQKIPLK 1012

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAEKNLYPLIVSVPV KPLN V+SSL+DQE GHQ EN NLSSD+LHR+Y+VD
Sbjct: 1013 GTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVDQEAGHQLENDNLSSDELHRSYSVD 1072

Query: 36   EFEVRILE 13
            EFEVR+LE
Sbjct: 1073 EFEVRVLE 1080


>ref|XP_002318462.2| cleavage and polyadenylation specificity factor family protein
            [Populus trichocarpa] gi|550326263|gb|EEE96682.2|
            cleavage and polyadenylation specificity factor family
            protein [Populus trichocarpa]
          Length = 1455

 Score =  240 bits (612), Expect = 3e-61
 Identities = 112/130 (86%), Positives = 123/130 (94%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            RLRVHPQLCDGSIVAFTVLH VNCNHGLIYVTSQG LKIC L S++SYD+YWPVQKIPLK
Sbjct: 968  RLRVHPQLCDGSIVAFTVLHTVNCNHGLIYVTSQGNLKICHLSSVSSYDNYWPVQKIPLK 1027

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            GTPHQVTYFAE+NLYPLIVSVPV KP+NQV+SSL+DQEVGHQ ENHNLSS+++HRTY+VD
Sbjct: 1028 GTPHQVTYFAERNLYPLIVSVPVQKPVNQVLSSLVDQEVGHQIENHNLSSEEIHRTYSVD 1087

Query: 36   EFEVRILERS 7
            EFEVRILE S
Sbjct: 1088 EFEVRILEPS 1097


>ref|XP_010109097.1| Cleavage and polyadenylation specificity factor subunit 1 [Morus
            notabilis] gi|587933947|gb|EXC20897.1| Cleavage and
            polyadenylation specificity factor subunit 1 [Morus
            notabilis]
          Length = 1479

 Score =  239 bits (611), Expect = 4e-61
 Identities = 116/129 (89%), Positives = 123/129 (95%), Gaps = 1/129 (0%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQK-IPL 220
            RLRVHPQLCDGSIVAFTVLHNVNCNHG IYVTS+GILKICQLPSITSYD+YWPVQK IPL
Sbjct: 962  RLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSEGILKICQLPSITSYDNYWPVQKVIPL 1021

Query: 219  KGTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTV 40
            KGTPHQVTYFAE+NLYPLIVSVPV KPLNQV+SSL+DQEVGHQ EN NLS DDL+RTYT+
Sbjct: 1022 KGTPHQVTYFAERNLYPLIVSVPVPKPLNQVMSSLLDQEVGHQFENPNLSPDDLNRTYTI 1081

Query: 39   DEFEVRILE 13
            DEFEVRILE
Sbjct: 1082 DEFEVRILE 1090


>gb|KDO65373.1| hypothetical protein CISIN_1g0005452mg, partial [Citrus sinensis]
          Length = 890

 Score =  238 bits (608), Expect = 1e-60
 Identities = 113/128 (88%), Positives = 121/128 (94%)
 Frame = -2

Query: 396 RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
           RLRVHPQLCDGSIVAFTVLHNVNCNHG IYVTSQGILKICQLPS ++YD+YWPVQKIPLK
Sbjct: 401 RLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQKIPLK 460

Query: 216 GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
            TPHQ+TYFAEKNLYPLIVSVPV KPLNQV+S LIDQEVGHQ +NHNLSS DLHRTYTV+
Sbjct: 461 ATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLSSVDLHRTYTVE 520

Query: 36  EFEVRILE 13
           E+EVRILE
Sbjct: 521 EYEVRILE 528


>ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like isoform X2 [Citrus sinensis]
          Length = 1457

 Score =  238 bits (608), Expect = 1e-60
 Identities = 113/128 (88%), Positives = 121/128 (94%)
 Frame = -2

Query: 396  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGILKICQLPSITSYDSYWPVQKIPLK 217
            RLRVHPQLCDGSIVAFTVLHNVNCNHG IYVTSQGILKICQLPS ++YD+YWPVQKIPLK
Sbjct: 968  RLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQKIPLK 1027

Query: 216  GTPHQVTYFAEKNLYPLIVSVPVHKPLNQVISSLIDQEVGHQAENHNLSSDDLHRTYTVD 37
             TPHQ+TYFAEKNLYPLIVSVPV KPLNQV+S LIDQEVGHQ +NHNLSS DLHRTYTV+
Sbjct: 1028 ATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLSSVDLHRTYTVE 1087

Query: 36   EFEVRILE 13
            E+EVRILE
Sbjct: 1088 EYEVRILE 1095


Top