BLASTX nr result
ID: Ziziphus21_contig00022889
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00022889
(283 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEI27565.1| RNA polymerase beta subunit [Hovenia trichocarpa ... 191 1e-46
ref|YP_008965483.1| RNA polymerase beta' subunit [Pyrus spinosa]... 187 3e-45
ref|YP_008082723.1| RNA polymerase beta' subunit [Prinsepia util... 187 3e-45
ref|YP_004842229.1| RNA polymerase beta' subunit [Pyrus pyrifoli... 187 3e-45
gb|AEI27566.1| RNA polymerase beta subunit [Neillia thibetica] 187 3e-45
gb|AEI27568.1| RNA polymerase beta subunit [Rhamnus utilis] 184 2e-44
gb|AKC99763.1| RNA polymerase beta'' subunit (chloroplast) [Prun... 184 3e-44
ref|YP_009136469.1| RNA polymerase beta'' subunit (chloroplast) ... 184 3e-44
ref|YP_009136385.1| RNA polymerase beta'' subunit (chloroplast) ... 184 3e-44
ref|YP_009136301.1| RNA polymerase beta'' subunit (chloroplast) ... 184 3e-44
ref|YP_009024671.1| RNA polymerase beta' subunit (chloroplast) [... 184 3e-44
ref|YP_009020028.1| RNA polymerase beta' subunit (plastid) [Prun... 184 3e-44
ref|YP_004021655.1| RNA polymerase beta' subunit [Prunus persica... 184 3e-44
gb|ABV65729.1| RNA polymerase beta'' subunit, partial (chloropla... 184 3e-44
gb|AEI27563.1| RNA polymerase beta subunit [Gouania mauritiana] 183 5e-44
ref|YP_009171589.1| RNA polymerase beta' subunit (chloroplast) [... 182 6e-44
ref|YP_009143543.1| RNA polymerase beta' subunit-2 (chloroplast)... 182 6e-44
ref|YP_009123063.1| RNA polymerase beta' subunit (chloroplast) [... 182 6e-44
gb|ERN02618.1| hypothetical protein AMTR_s00390p00012910 [Ambore... 182 6e-44
gb|AEI27564.1| RNA polymerase beta subunit [Hippophae rhamnoides... 182 6e-44
>gb|AEI27565.1| RNA polymerase beta subunit [Hovenia trichocarpa var. robusta]
Length = 1254
Score = 191 bits (486), Expect = 1e-46
Identities = 93/94 (98%), Positives = 93/94 (98%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKK FVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV
Sbjct: 714 KESKKLKNWIYVQWITPTKKKDFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 773
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK
Sbjct: 774 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 807
>ref|YP_008965483.1| RNA polymerase beta' subunit [Pyrus spinosa]
gi|565666455|emb|CDI73555.1| RNA polymerase beta' subunit
[Pyrus spinosa]
Length = 1373
Score = 187 bits (474), Expect = 3e-45
Identities = 89/94 (94%), Positives = 92/94 (97%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINL TLFP+DPL+E DNLELRVV
Sbjct: 753 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLATLFPQDPLRERDNLELRVV 812
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYILYGNGKPIRGISGTSIQLVRTCL+LNWDQDK
Sbjct: 813 NYILYGNGKPIRGISGTSIQLVRTCLLLNWDQDK 846
>ref|YP_008082723.1| RNA polymerase beta' subunit [Prinsepia utilis]
gi|501418813|gb|AGL94690.1| RNA polymerase beta' subunit
[Prinsepia utilis]
Length = 1384
Score = 187 bits (474), Expect = 3e-45
Identities = 89/94 (94%), Positives = 92/94 (97%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINL TLFP+DPL+E DNLELRVV
Sbjct: 752 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLATLFPQDPLRERDNLELRVV 811
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYILYGNGKPIRGISGTSIQLVRTCL+LNWDQDK
Sbjct: 812 NYILYGNGKPIRGISGTSIQLVRTCLMLNWDQDK 845
>ref|YP_004842229.1| RNA polymerase beta' subunit [Pyrus pyrifolia]
gi|345433551|dbj|BAK69373.1| RNA polymerase beta' subunit
[Pyrus pyrifolia]
Length = 1373
Score = 187 bits (474), Expect = 3e-45
Identities = 89/94 (94%), Positives = 92/94 (97%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINL TLFP+DPL+E DNLELRVV
Sbjct: 753 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLATLFPQDPLRERDNLELRVV 812
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYILYGNGKPIRGISGTSIQLVRTCL+LNWDQDK
Sbjct: 813 NYILYGNGKPIRGISGTSIQLVRTCLLLNWDQDK 846
>gb|AEI27566.1| RNA polymerase beta subunit [Neillia thibetica]
Length = 1258
Score = 187 bits (474), Expect = 3e-45
Identities = 89/94 (94%), Positives = 92/94 (97%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINL TLFP+DPL+E DNLELRVV
Sbjct: 712 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLATLFPQDPLRERDNLELRVV 771
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYILYGNGKPIRGISGTSIQLVRTCL+LNWDQDK
Sbjct: 772 NYILYGNGKPIRGISGTSIQLVRTCLMLNWDQDK 805
>gb|AEI27568.1| RNA polymerase beta subunit [Rhamnus utilis]
Length = 1250
Score = 184 bits (468), Expect = 2e-44
Identities = 89/94 (94%), Positives = 91/94 (96%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLK WIYVQWITPTKKK+FVLVRPVIIYEIADGINLETLFP+DPLQE DNLELRVV
Sbjct: 714 KESKKLKKWIYVQWITPTKKKFFVLVRPVIIYEIADGINLETLFPQDPLQERDNLELRVV 773
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
N ILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK
Sbjct: 774 NSILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 807
>gb|AKC99763.1| RNA polymerase beta'' subunit (chloroplast) [Prunus serrulata var.
spontanea]
Length = 1368
Score = 184 bits (466), Expect = 3e-44
Identities = 87/94 (92%), Positives = 90/94 (95%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEI DGINL TLFP+DPL+E DNLELRVV
Sbjct: 750 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEITDGINLATLFPQDPLRERDNLELRVV 809
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYI YGNGKPIRGISGTSIQLVRTCL+LNWDQDK
Sbjct: 810 NYIFYGNGKPIRGISGTSIQLVRTCLMLNWDQDK 843
>ref|YP_009136469.1| RNA polymerase beta'' subunit (chloroplast) [Prunus padus]
gi|808178349|gb|AKC99679.1| RNA polymerase beta'' subunit
(chloroplast) [Prunus padus]
Length = 1368
Score = 184 bits (466), Expect = 3e-44
Identities = 87/94 (92%), Positives = 90/94 (95%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEI DGINL TLFP+DPL+E DNLELRVV
Sbjct: 750 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEITDGINLATLFPQDPLRERDNLELRVV 809
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYI YGNGKPIRGISGTSIQLVRTCL+LNWDQDK
Sbjct: 810 NYIFYGNGKPIRGISGTSIQLVRTCLMLNWDQDK 843
>ref|YP_009136385.1| RNA polymerase beta'' subunit (chloroplast) [Prunus maximowiczii]
gi|808178264|gb|AKC99595.1| RNA polymerase beta'' subunit
(chloroplast) [Prunus maximowiczii]
Length = 1368
Score = 184 bits (466), Expect = 3e-44
Identities = 87/94 (92%), Positives = 90/94 (95%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEI DGINL TLFP+DPL+E DNLELRVV
Sbjct: 750 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEITDGINLATLFPQDPLRERDNLELRVV 809
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYI YGNGKPIRGISGTSIQLVRTCL+LNWDQDK
Sbjct: 810 NYIFYGNGKPIRGISGTSIQLVRTCLMLNWDQDK 843
>ref|YP_009136301.1| RNA polymerase beta'' subunit (chloroplast) [Prunus yedoensis]
gi|808178179|gb|AKC99511.1| RNA polymerase beta'' subunit
(chloroplast) [Prunus yedoensis]
gi|808178519|gb|AKC99847.1| RNA polymerase beta'' subunit
(chloroplast) [Prunus subhirtella var. subhirtella]
gi|808178604|gb|AKC99931.1| RNA polymerase beta'' subunit
(chloroplast) [Prunus subhirtella var. subhirtella]
Length = 1368
Score = 184 bits (466), Expect = 3e-44
Identities = 87/94 (92%), Positives = 90/94 (95%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEI DGINL TLFP+DPL+E DNLELRVV
Sbjct: 750 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEITDGINLATLFPQDPLRERDNLELRVV 809
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYI YGNGKPIRGISGTSIQLVRTCL+LNWDQDK
Sbjct: 810 NYIFYGNGKPIRGISGTSIQLVRTCLMLNWDQDK 843
>ref|YP_009024671.1| RNA polymerase beta' subunit (chloroplast) [Prunus kansuensis]
gi|597569096|gb|AHN13527.1| RNA polymerase beta' subunit
(chloroplast) [Prunus kansuensis]
Length = 1368
Score = 184 bits (466), Expect = 3e-44
Identities = 87/94 (92%), Positives = 90/94 (95%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEI DGINL TLFP+DPL+E DNLELRVV
Sbjct: 750 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEITDGINLATLFPQDPLRERDNLELRVV 809
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYI YGNGKPIRGISGTSIQLVRTCL+LNWDQDK
Sbjct: 810 NYIFYGNGKPIRGISGTSIQLVRTCLMLNWDQDK 843
>ref|YP_009020028.1| RNA polymerase beta' subunit (plastid) [Prunus mume]
gi|589061043|gb|AHK26864.1| RNA polymerase beta' subunit
(plastid) [Prunus mume]
Length = 1368
Score = 184 bits (466), Expect = 3e-44
Identities = 87/94 (92%), Positives = 90/94 (95%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEI DGINL TLFP+DPL+E DNLELRVV
Sbjct: 750 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEITDGINLATLFPQDPLRERDNLELRVV 809
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYI YGNGKPIRGISGTSIQLVRTCL+LNWDQDK
Sbjct: 810 NYIFYGNGKPIRGISGTSIQLVRTCLMLNWDQDK 843
>ref|YP_004021655.1| RNA polymerase beta' subunit [Prunus persica]
gi|309321424|gb|ADO64965.1| RNA polymerase beta' subunit
[Prunus persica]
Length = 1368
Score = 184 bits (466), Expect = 3e-44
Identities = 87/94 (92%), Positives = 90/94 (95%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEI DGINL TLFP+DPL+E DNLELRVV
Sbjct: 750 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEITDGINLATLFPQDPLRERDNLELRVV 809
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYI YGNGKPIRGISGTSIQLVRTCL+LNWDQDK
Sbjct: 810 NYIFYGNGKPIRGISGTSIQLVRTCLMLNWDQDK 843
>gb|ABV65729.1| RNA polymerase beta'' subunit, partial (chloroplast) [Datisca
cannabina]
Length = 1280
Score = 184 bits (466), Expect = 3e-44
Identities = 87/94 (92%), Positives = 90/94 (95%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
K+SKK KNWIYVQWITPTKKKYFVLVRPVI+YEI DGINL TLFP+DPLQE DNLELRVV
Sbjct: 723 KKSKKFKNWIYVQWITPTKKKYFVLVRPVILYEITDGINLVTLFPQDPLQERDNLELRVV 782
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK
Sbjct: 783 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 816
>gb|AEI27563.1| RNA polymerase beta subunit [Gouania mauritiana]
Length = 1246
Score = 183 bits (464), Expect = 5e-44
Identities = 88/91 (96%), Positives = 89/91 (97%)
Frame = -2
Query: 273 KKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVVNYI 94
+KLKNWIY QWITPTKKK FVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVVNYI
Sbjct: 711 QKLKNWIYAQWITPTKKKDFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVVNYI 770
Query: 93 LYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
LYGNGKPIRGISGTSIQLVRTCLVLNWDQDK
Sbjct: 771 LYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 801
>ref|YP_009171589.1| RNA polymerase beta' subunit (chloroplast) [Elaeagnus macrophylla]
gi|814936635|gb|AKE36486.1| RNA polymerase beta' subunit
(chloroplast) [Elaeagnus macrophylla]
Length = 1383
Score = 182 bits (463), Expect = 6e-44
Identities = 87/94 (92%), Positives = 91/94 (96%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KES+KLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFP DPL E DNLELRVV
Sbjct: 757 KESQKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPEDPLGEKDNLELRVV 816
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYILYGNGKPIRGI+GTSIQLVRTCLVLNW+Q+K
Sbjct: 817 NYILYGNGKPIRGITGTSIQLVRTCLVLNWNQNK 850
>ref|YP_009143543.1| RNA polymerase beta' subunit-2 (chloroplast) [Cannabis sativa]
gi|828348811|gb|AKK32265.1| RNA polymerase beta'
subunit-2 (chloroplast) [Cannabis sativa]
gi|873820241|gb|AKP55238.1| RNA polymerase beta'
subunit-2 (chloroplast) [Cannabis sativa subsp. sativa]
Length = 1389
Score = 182 bits (463), Expect = 6e-44
Identities = 88/93 (94%), Positives = 90/93 (96%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFP+D LQE DNLELRVV
Sbjct: 755 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPQDLLQEKDNLELRVV 814
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQD 4
NYILYGNGKPI GISGTSIQLVRTCL+LNWDQD
Sbjct: 815 NYILYGNGKPILGISGTSIQLVRTCLMLNWDQD 847
>ref|YP_009123063.1| RNA polymerase beta' subunit (chloroplast) [Cannabis sativa]
gi|756142202|gb|AJK91412.1| RNA polymerase beta' subunit
(chloroplast) [Cannabis sativa]
gi|915477555|gb|AKX33538.1| RNA polymerase beta' subunit
(chloroplast) [Cannabis sativa]
Length = 1393
Score = 182 bits (463), Expect = 6e-44
Identities = 88/93 (94%), Positives = 90/93 (96%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFP+D LQE DNLELRVV
Sbjct: 759 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPQDLLQEKDNLELRVV 818
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQD 4
NYILYGNGKPI GISGTSIQLVRTCL+LNWDQD
Sbjct: 819 NYILYGNGKPILGISGTSIQLVRTCLMLNWDQD 851
>gb|ERN02618.1| hypothetical protein AMTR_s00390p00012910 [Amborella trichopoda]
Length = 1733
Score = 182 bits (463), Expect = 6e-44
Identities = 88/93 (94%), Positives = 90/93 (96%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFP+D LQE DNLELRVV
Sbjct: 729 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPQDLLQEKDNLELRVV 788
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQD 4
NYILYGNGKPI GISGTSIQLVRTCL+LNWDQD
Sbjct: 789 NYILYGNGKPILGISGTSIQLVRTCLMLNWDQD 821
>gb|AEI27564.1| RNA polymerase beta subunit [Hippophae rhamnoides subsp. sinensis]
Length = 1260
Score = 182 bits (463), Expect = 6e-44
Identities = 87/94 (92%), Positives = 91/94 (96%)
Frame = -2
Query: 282 KESKKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPRDPLQESDNLELRVV 103
KES+KLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFP DPL E DNLELRVV
Sbjct: 716 KESQKLKNWIYVQWITPTKKKYFVLVRPVIIYEIADGINLETLFPEDPLGEKDNLELRVV 775
Query: 102 NYILYGNGKPIRGISGTSIQLVRTCLVLNWDQDK 1
NYILYGNGKPIRGI+GTSIQLVRTCLVLNW+Q+K
Sbjct: 776 NYILYGNGKPIRGITGTSIQLVRTCLVLNWNQNK 809