BLASTX nr result
ID: Ziziphus21_contig00022022
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00022022
(389 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007027153.1| RNA-binding family protein with retrovirus z... 99 5e-24
gb|KHG01943.1| Serine/arginine-rich splicing factor 4 [Gossypium... 83 8e-20
gb|KHG01944.1| Serine/arginine-rich splicing factor 6 [Gossypium... 83 8e-20
emb|CBI32650.3| unnamed protein product [Vitis vinifera] 100 7e-19
gb|KHF97435.1| Serine/arginine-rich splicing factor 4 [Gossypium... 94 4e-17
gb|AGE46113.1| arginine/serine-rich splicing factor RS2Z35 trans... 94 4e-17
gb|AGE46058.1| arginine/serine-rich splicing factor RS2Z35 trans... 90 8e-16
gb|AFW74823.1| hypothetical protein ZEAMMB73_961242, partial [Ze... 90 8e-16
gb|AGE46057.1| arginine/serine-rich splicing factor RS2Z35 trans... 84 4e-14
gb|AGE46053.1| arginine/serine-rich splicing factor RS2Z37B tran... 80 6e-13
gb|AGE46047.1| arginine/serine-rich splicing factor RS2Z39 trans... 77 4e-12
ref|XP_010086758.1| Serine/arginine-rich splicing factor 7 [Moru... 75 3e-11
emb|CDY45333.1| BnaC01g30370D [Brassica napus] 74 3e-11
ref|XP_003554342.1| PREDICTED: serine/arginine-rich splicing fac... 74 4e-11
dbj|BAD44429.1| unknown protein [Arabidopsis thaliana] 74 6e-11
ref|XP_010426999.1| PREDICTED: serine/arginine-rich splicing fac... 74 6e-11
ref|XP_010504113.1| PREDICTED: serine/arginine-rich splicing fac... 74 6e-11
ref|XP_009341794.1| PREDICTED: serine/arginine-rich splicing fac... 74 6e-11
ref|XP_008366711.1| PREDICTED: LOW QUALITY PROTEIN: serine/argin... 74 6e-11
ref|XP_008359700.1| PREDICTED: serine/arginine-rich splicing fac... 74 6e-11
>ref|XP_007027153.1| RNA-binding family protein with retrovirus zinc finger-like domain,
putative [Theobroma cacao] gi|508715758|gb|EOY07655.1|
RNA-binding family protein with retrovirus zinc
finger-like domain, putative [Theobroma cacao]
Length = 312
Score = 99.0 bits (245), Expect(2) = 5e-24
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGRFLGFGLTWRSLMGGWPLVELVEIL 193
MPR+D RYG+TRLYVGR+SSRTR+RDLE +FSRYGRFLGF LTWR ++ G L ELVEI
Sbjct: 1 MPRFDGRYGTTRLYVGRLSSRTRARDLEHIFSRYGRFLGFCLTWRPMVRGSALAELVEIP 60
Query: 192 AEC 184
A+C
Sbjct: 61 AQC 63
Score = 38.9 bits (89), Expect(2) = 5e-24
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -2
Query: 64 LSNDSLTVSGNHFRRVRDVDM 2
LSND LTVS N+FRR+RDVDM
Sbjct: 65 LSNDGLTVSSNNFRRIRDVDM 85
>gb|KHG01943.1| Serine/arginine-rich splicing factor 4 [Gossypium arboreum]
Length = 286
Score = 83.2 bits (204), Expect(2) = 8e-20
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGRFLGFGLTWRSLMGG 223
M RYDDRY TRLYVGRISSRTR+RDLERLFSRYGRFLGF TWR ++ G
Sbjct: 1 MRRYDDRYCHTRLYVGRISSRTRTRDLERLFSRYGRFLGFCQTWRPVVRG 50
Score = 40.4 bits (93), Expect(2) = 8e-20
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = -2
Query: 223 VAFGGIGGNSCRVYRRLWRFFL*CYCVFLCNWQQSQTGV*FVCDGQSIILLQ*LSNDSLT 44
V GGIGGNSC VYR D +I+ + L+ D L+
Sbjct: 51 VDLGGIGGNSCPVYR----------------------------DPLAILSVY-LTTDGLS 81
Query: 43 VSGNHFRRVRDVDM 2
VSGN FRR+ DVDM
Sbjct: 82 VSGNRFRRILDVDM 95
>gb|KHG01944.1| Serine/arginine-rich splicing factor 6 [Gossypium arboreum]
Length = 254
Score = 83.2 bits (204), Expect(2) = 8e-20
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGRFLGFGLTWRSLMGG 223
M RYDDRY TRLYVGRISSRTR+RDLERLFSRYGRFLGF TWR ++ G
Sbjct: 1 MRRYDDRYCHTRLYVGRISSRTRTRDLERLFSRYGRFLGFCQTWRPVVRG 50
Score = 40.4 bits (93), Expect(2) = 8e-20
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = -2
Query: 223 VAFGGIGGNSCRVYRRLWRFFL*CYCVFLCNWQQSQTGV*FVCDGQSIILLQ*LSNDSLT 44
V GGIGGNSC VYR D +I+ + L+ D L+
Sbjct: 51 VDLGGIGGNSCPVYR----------------------------DPLAILSVY-LTTDGLS 81
Query: 43 VSGNHFRRVRDVDM 2
VSGN FRR+ DVDM
Sbjct: 82 VSGNRFRRILDVDM 95
>emb|CBI32650.3| unnamed protein product [Vitis vinifera]
Length = 60
Score = 99.8 bits (247), Expect = 7e-19
Identities = 44/51 (86%), Positives = 49/51 (96%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGRFLGFGLTWRSLMGGW 220
MPRYDDRYG+TRLYVGR+SSRTR+RDLE LFSRYGRFLGF LTWRS++GGW
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLESLFSRYGRFLGFCLTWRSMVGGW 51
>gb|KHF97435.1| Serine/arginine-rich splicing factor 4 [Gossypium arboreum]
Length = 319
Score = 94.0 bits (232), Expect = 4e-17
Identities = 56/107 (52%), Positives = 63/107 (58%), Gaps = 18/107 (16%)
Frame = -3
Query: 372 MPRYDDRYGS-TRLYVGRISSRTRSRDLERLFSRYGR-----------------FLGFGL 247
MPRYDDR GS TRLYVG +SSRTRSRDLE +FSRYGR LGF L
Sbjct: 1 MPRYDDRRGSGTRLYVGHLSSRTRSRDLEDMFSRYGRCSDDEVGRNRALAKPLWSLGFCL 60
Query: 246 TWRSLMGGWPLVELVEILAECIGDFGDSFCNVIACFYAIGNNLKLVF 106
TWRS++ G C G FG+ FC+VIACFY G K+VF
Sbjct: 61 TWRSMVRG------------CHGGFGEFFCSVIACFYRNGTISKVVF 95
>gb|AGE46113.1| arginine/serine-rich splicing factor RS2Z35 transcript II [Sorghum
bicolor]
Length = 81
Score = 94.0 bits (232), Expect = 4e-17
Identities = 48/79 (60%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGRFLGFGLTWRSLMGGWPLVELVEIL 193
MPRYDDRYG+TRLYVGR++ RTRSRDLE LFS+YGRF F T G PLVELV I+
Sbjct: 1 MPRYDDRYGNTRLYVGRLAPRTRSRDLEYLFSKYGRFSVFYTTMEVCGGRVPLVELVAIV 60
Query: 192 AECIGDFGDS--FCNVIAC 142
+ + DFG+ +CN+I C
Sbjct: 61 PKFVEDFGEGRPWCNLIDC 79
>gb|AGE46058.1| arginine/serine-rich splicing factor RS2Z35 transcript III [Zea
mays]
Length = 81
Score = 89.7 bits (221), Expect = 8e-16
Identities = 47/79 (59%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGRFLGFGLTWRSLMGGWPLVELVEIL 193
MPRYDDR+G+TRLYVGR++ RTRSRDLE LFS+YGRF F T G PLVELV I+
Sbjct: 1 MPRYDDRHGNTRLYVGRLAPRTRSRDLEYLFSKYGRFSVFYPTMEVCGGRVPLVELVAIV 60
Query: 192 AECIGDFGDS--FCNVIAC 142
+ DFG+ +CN+I C
Sbjct: 61 PIFVEDFGEGRPWCNLIDC 79
>gb|AFW74823.1| hypothetical protein ZEAMMB73_961242, partial [Zea mays]
Length = 124
Score = 89.7 bits (221), Expect = 8e-16
Identities = 47/79 (59%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGRFLGFGLTWRSLMGGWPLVELVEIL 193
MPRYDDR+G+TRLYVGR++ RTRSRDLE LFS+YGRF F T G PLVELV I+
Sbjct: 44 MPRYDDRHGNTRLYVGRLAPRTRSRDLEYLFSKYGRFSVFYPTMEVCGGRVPLVELVAIV 103
Query: 192 AECIGDFGDS--FCNVIAC 142
+ DFG+ +CN+I C
Sbjct: 104 PIFVEDFGEGRPWCNLIDC 122
>gb|AGE46057.1| arginine/serine-rich splicing factor RS2Z35 transcript II [Zea
mays]
Length = 73
Score = 84.0 bits (206), Expect = 4e-14
Identities = 43/69 (62%), Positives = 51/69 (73%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGRFLGFGLTWRSLMGGWPLVELVEIL 193
MPRYDDR+G+TRLYVGR++ RTRSRDLE LFS+YGRF F T G PLVELV I+
Sbjct: 1 MPRYDDRHGNTRLYVGRLAPRTRSRDLEYLFSKYGRFSVFYPTMEVCGGRVPLVELVAIV 60
Query: 192 AECIGDFGD 166
+ DFG+
Sbjct: 61 PIFVEDFGE 69
>gb|AGE46053.1| arginine/serine-rich splicing factor RS2Z37B transcript II [Zea
mays] gi|448878182|gb|AGE46054.1| arginine/serine-rich
splicing factor RS2Z37B transcript III [Zea mays]
Length = 58
Score = 80.1 bits (196), Expect = 6e-13
Identities = 41/60 (68%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGRFLGFGLTWRSLMGG-WPLVELVEI 196
MPRYDDRYG TRLYVGR++ RTRSRDLE LF +YGRF GF +R + GG PLV+LV I
Sbjct: 1 MPRYDDRYGGTRLYVGRLAPRTRSRDLEYLFGKYGRFFGF---YREVFGGRVPLVDLVTI 57
>gb|AGE46047.1| arginine/serine-rich splicing factor RS2Z39 transcript V [Zea mays]
Length = 54
Score = 77.4 bits (189), Expect = 4e-12
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGRFLGFGLTWRSLMGGWP 217
MPRYDDRYG TRLYVGR+++RTRSRDLE LF RYGRF FG RSL+ G P
Sbjct: 1 MPRYDDRYGGTRLYVGRLATRTRSRDLEHLFGRYGRF--FGFYRRSLVEGCP 50
>ref|XP_010086758.1| Serine/arginine-rich splicing factor 7 [Morus notabilis]
gi|587832598|gb|EXB23437.1| Serine/arginine-rich
splicing factor 7 [Morus notabilis]
Length = 301
Score = 74.7 bits (182), Expect = 3e-11
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGR 265
MPRYDDRYG+TRLYVGR+SSRTRSRDLERLFSRYGR
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRSRDLERLFSRYGR 36
>emb|CDY45333.1| BnaC01g30370D [Brassica napus]
Length = 122
Score = 74.3 bits (181), Expect = 3e-11
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = -3
Query: 378 LKMPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGR 265
L MPR+DDRYG+TRLYVGR+SSRTRSRDLERLFSRYGR
Sbjct: 85 LTMPRFDDRYGNTRLYVGRLSSRTRSRDLERLFSRYGR 122
>ref|XP_003554342.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
X1 [Glycine max] gi|571558271|ref|XP_006604541.1|
PREDICTED: serine/arginine-rich splicing factor
RS2Z32-like isoform X2 [Glycine max]
gi|571558274|ref|XP_006604542.1| PREDICTED:
serine/arginine-rich splicing factor RS2Z32-like isoform
X3 [Glycine max] gi|734316909|gb|KHN02391.1|
Serine/arginine-rich splicing factor 4 [Glycine soja]
gi|947046254|gb|KRG95883.1| hypothetical protein
GLYMA_19G176200 [Glycine max]
gi|947046255|gb|KRG95884.1| hypothetical protein
GLYMA_19G176200 [Glycine max]
gi|947046256|gb|KRG95885.1| hypothetical protein
GLYMA_19G176200 [Glycine max]
Length = 297
Score = 73.9 bits (180), Expect = 4e-11
Identities = 33/39 (84%), Positives = 37/39 (94%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGRFLG 256
MPRYDD+YG+TRLYVGR+SSRTRSRDLER+FSRYGR G
Sbjct: 1 MPRYDDKYGNTRLYVGRLSSRTRSRDLERVFSRYGRIRG 39
>dbj|BAD44429.1| unknown protein [Arabidopsis thaliana]
Length = 290
Score = 73.6 bits (179), Expect = 6e-11
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGR 265
MPRYDDRYG+TRLYVGR+SSRTR+RDLERLFSRYGR
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGR 36
>ref|XP_010426999.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
X1 [Camelina sativa]
Length = 284
Score = 73.6 bits (179), Expect = 6e-11
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGR 265
MPRYDDRYG+TRLYVGR+SSRTR+RDLERLFSRYGR
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGR 36
>ref|XP_010504113.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32 isoform X1
[Camelina sativa] gi|727467901|ref|XP_010515844.1|
PREDICTED: serine/arginine-rich splicing factor RS2Z32
isoform X1 [Camelina sativa]
Length = 284
Score = 73.6 bits (179), Expect = 6e-11
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGR 265
MPRYDDRYG+TRLYVGR+SSRTR+RDLERLFSRYGR
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGR 36
>ref|XP_009341794.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
X1 [Pyrus x bretschneideri]
Length = 309
Score = 73.6 bits (179), Expect = 6e-11
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGR 265
MPRYDDRYG+TRLYVGR+SSRTRSRDLERLF+RYGR
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRSRDLERLFNRYGR 36
>ref|XP_008366711.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor RS2Z33-like [Malus domestica]
Length = 179
Score = 73.6 bits (179), Expect = 6e-11
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGR 265
MPRYDDRYG+TRLYVGR+SSRTRSRDLERLF+RYGR
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRSRDLERLFNRYGR 36
>ref|XP_008359700.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
X1 [Malus domestica]
Length = 309
Score = 73.6 bits (179), Expect = 6e-11
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = -3
Query: 372 MPRYDDRYGSTRLYVGRISSRTRSRDLERLFSRYGR 265
MPRYDDRYG+TRLYVGR+SSRTRSRDLERLF+RYGR
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRSRDLERLFNRYGR 36