BLASTX nr result
ID: Ziziphus21_contig00021876
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00021876
(473 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 213 3e-53
ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabi... 211 2e-52
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th... 208 1e-51
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 207 3e-51
ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [C... 206 5e-51
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 199 9e-49
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2 [F... 198 1e-48
ref|XP_012440441.1| PREDICTED: RNA-dependent RNA polymerase 2 [G... 191 2e-46
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 189 9e-46
gb|KHG14638.1| RNA-dependent RNA polymerase 2 -like protein [Gos... 188 1e-45
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 188 1e-45
ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 is... 186 8e-45
gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sin... 184 2e-44
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 184 2e-44
ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependen... 182 7e-44
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 182 7e-44
ref|XP_011028594.1| PREDICTED: RNA-dependent RNA polymerase 2 [P... 174 3e-41
ref|XP_013612295.1| PREDICTED: RNA-dependent RNA polymerase 2 [B... 169 7e-40
emb|CDX86814.1| BnaA09g22040D [Brassica napus] 169 7e-40
ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, part... 168 2e-39
>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
gi|462407047|gb|EMJ12511.1| hypothetical protein
PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 213 bits (543), Expect = 3e-53
Identities = 99/144 (68%), Positives = 126/144 (87%)
Frame = -1
Query: 440 MAVEDRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFST 261
MA+ +RPTVRV+NIP T A++LL+FL+SKLG +SVFA+EI +D KNWKSRGFGRVQF+T
Sbjct: 1 MALAERPTVRVSNIPQTVTAKELLSFLQSKLGTDSVFAVEIISDHKNWKSRGFGRVQFTT 60
Query: 260 IEAKSRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMS 81
+EAKS A+SLSL+N LVF S +LR+SE ++DII RPVDP+ R++G VLH GF+VK D MS
Sbjct: 61 LEAKSEAYSLSLQNGLVFKSESLRLSETYDDIIQRPVDPKRRLNGTVLHAGFMVKGDCMS 120
Query: 80 VLESWKGVRAWVMPERRKIEFWVW 9
+LESW+GVRAWVMPER+++EFWVW
Sbjct: 121 MLESWEGVRAWVMPERKRVEFWVW 144
>ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
gi|587928851|gb|EXC16034.1| RNA-dependent RNA polymerase
2 [Morus notabilis]
Length = 1115
Score = 211 bits (536), Expect = 2e-52
Identities = 97/143 (67%), Positives = 121/143 (84%)
Frame = -1
Query: 437 AVEDRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTI 258
A+ +RPTVRVTNIP TAIA DL TFLESKLGPNSVFA+EIST+RKNWKSRGFGRVQF+++
Sbjct: 3 AMVERPTVRVTNIPQTAIATDLQTFLESKLGPNSVFAVEISTERKNWKSRGFGRVQFTSL 62
Query: 257 EAKSRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMSV 78
AK A +LSL N+ VF SRNL I + H+DI+ PVDP+ R++ GVLH GF++++D M+V
Sbjct: 63 AAKLVAQALSLSNNFVFRSRNLGIFDTHDDIVALPVDPKLRLEDGVLHAGFMIRDDRMAV 122
Query: 77 LESWKGVRAWVMPERRKIEFWVW 9
L+SW+GVRAW MPER ++EFWVW
Sbjct: 123 LQSWEGVRAWAMPERNRVEFWVW 145
>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
polymerase 2 isoform 1 [Theobroma cacao]
gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
Length = 1149
Score = 208 bits (530), Expect = 1e-51
Identities = 95/142 (66%), Positives = 123/142 (86%)
Frame = -1
Query: 428 DRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTIEAK 249
+RPT+RVTN+P TAIA+DLL FLE KLG ++VFAIEISTDR NWKSRGFGRVQF+T+EAK
Sbjct: 12 ERPTLRVTNVPQTAIAKDLLEFLEYKLGTDTVFAIEISTDRNNWKSRGFGRVQFATLEAK 71
Query: 248 SRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMSVLES 69
S+AH LSL+NDLVF S +L++SE ++DII RP+ +R+DGGVLHVGF+V++D + VLE
Sbjct: 72 SKAHLLSLRNDLVFKSHSLKLSETYDDIIPRPIRADHRLDGGVLHVGFMVQDDYLRVLER 131
Query: 68 WKGVRAWVMPERRKIEFWVWQS 3
W+ VR W+MPERR++EFW+W +
Sbjct: 132 WEDVRGWLMPERRRLEFWLWNN 153
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus] gi|700208501|gb|KGN63597.1|
hypothetical protein Csa_1G005580 [Cucumis sativus]
Length = 1117
Score = 207 bits (526), Expect = 3e-51
Identities = 96/144 (66%), Positives = 124/144 (86%)
Frame = -1
Query: 440 MAVEDRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFST 261
MA +R T+RV+N+P +AIA+DLL FL SKLGP+SVFAIEI T+RKNWKSRG GRVQF+T
Sbjct: 1 MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
Query: 260 IEAKSRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMS 81
+EAK++A SLS++N LVF ++NLR S ++DI+VRPV NR + GVLHVGF++KE+ MS
Sbjct: 61 LEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120
Query: 80 VLESWKGVRAWVMPERRKIEFWVW 9
VLESW+GV+AW+MPERR+IEFW+W
Sbjct: 121 VLESWEGVKAWIMPERRRIEFWIW 144
>ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cucumis melo]
Length = 1117
Score = 206 bits (524), Expect = 5e-51
Identities = 95/144 (65%), Positives = 125/144 (86%)
Frame = -1
Query: 440 MAVEDRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFST 261
MA +R T+RV+N+P +AIA+DLL FL SKLGP+SVFAIEI T+RKNWKSRG GRVQF+T
Sbjct: 1 MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
Query: 260 IEAKSRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMS 81
+EAK++A +LS++N+LVF ++NLR S ++DI+VRPV NR + GVLHVGF++KE+ MS
Sbjct: 61 LEAKAKAMALSVQNNLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120
Query: 80 VLESWKGVRAWVMPERRKIEFWVW 9
VLESW+GV+AW+MPERR+IEFW+W
Sbjct: 121 VLESWEGVKAWIMPERRRIEFWIW 144
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 199 bits (505), Expect = 9e-49
Identities = 94/143 (65%), Positives = 120/143 (83%)
Frame = -1
Query: 440 MAVEDRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFST 261
MAV +RPTV+V+NIP TAIA++L +FLESKLGPN+++A+EI+T+ KNWKSRGFGRVQF T
Sbjct: 1 MAVGERPTVKVSNIPKTAIAKELWSFLESKLGPNTIYALEIATEHKNWKSRGFGRVQFET 60
Query: 260 IEAKSRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMS 81
++AK A LSL+ DLVF +L IS +DIIVRPV+PRN+VD GVLHVGF+V++D M
Sbjct: 61 LQAKRAADLLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQVDSGVLHVGFLVEDDCML 120
Query: 80 VLESWKGVRAWVMPERRKIEFWV 12
VLESW+GV+ VMPER ++EFWV
Sbjct: 121 VLESWEGVKTLVMPERNRVEFWV 143
>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2 [Fragaria vesca subsp.
vesca]
Length = 1136
Score = 198 bits (503), Expect = 1e-48
Identities = 92/141 (65%), Positives = 115/141 (81%)
Frame = -1
Query: 428 DRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTIEAK 249
+RPTVRVTNIP T A +LL FLES LGP+SVFA+EI +D KNWKSRG+GR+QF+ + K
Sbjct: 8 ERPTVRVTNIPCTITATELLHFLESALGPDSVFAVEIVSDHKNWKSRGYGRIQFTALRHK 67
Query: 248 SRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMSVLES 69
+RA SLS DL F S NLR+ E H+DII RP+DPR+R++ VLH GFVV ++ MSVLES
Sbjct: 68 ARAQSLSSSADLFFKSHNLRLFEAHDDIIPRPLDPRHRLNSTVLHAGFVVNDETMSVLES 127
Query: 68 WKGVRAWVMPERRKIEFWVWQ 6
W+GVRAWVMPER+++EFWVW+
Sbjct: 128 WEGVRAWVMPERKRVEFWVWR 148
>ref|XP_012440441.1| PREDICTED: RNA-dependent RNA polymerase 2 [Gossypium raimondii]
gi|763786137|gb|KJB53208.1| hypothetical protein
B456_008G296900 [Gossypium raimondii]
Length = 1147
Score = 191 bits (484), Expect = 2e-46
Identities = 88/140 (62%), Positives = 113/140 (80%)
Frame = -1
Query: 428 DRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTIEAK 249
+RPT+R+TNIP TA+A+DLL F ESKLGP+SVFAIEISTDR NWKSRGFGRVQF+ +AK
Sbjct: 7 ERPTLRLTNIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAPQAK 66
Query: 248 SRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMSVLES 69
S A LS + L+F S +L++S ++DII RP+ +R+DGGVLH GF+ +D + VLE
Sbjct: 67 SDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGGVLHAGFMSSDDCLRVLER 126
Query: 68 WKGVRAWVMPERRKIEFWVW 9
W+GVR W+MPERR++EFWVW
Sbjct: 127 WEGVRGWIMPERRRLEFWVW 146
>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 189 bits (479), Expect = 9e-46
Identities = 87/140 (62%), Positives = 113/140 (80%)
Frame = -1
Query: 428 DRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTIEAK 249
+RPT+R+T+IP TA+A+DLL F ESKLGP+SVFAIEISTDR NWKSRGFGRVQF+ +AK
Sbjct: 7 ERPTLRLTHIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAPQAK 66
Query: 248 SRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMSVLES 69
S A LS + L+F S +L++S ++DII RP+ +R+DGGVLH GF+ +D + VLE
Sbjct: 67 SDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGGVLHAGFMSSDDCLRVLER 126
Query: 68 WKGVRAWVMPERRKIEFWVW 9
W+GVR W+MPERR++EFWVW
Sbjct: 127 WEGVRGWIMPERRRLEFWVW 146
>gb|KHG14638.1| RNA-dependent RNA polymerase 2 -like protein [Gossypium arboreum]
Length = 1147
Score = 188 bits (478), Expect = 1e-45
Identities = 87/140 (62%), Positives = 112/140 (80%)
Frame = -1
Query: 428 DRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTIEAK 249
+RPT+R+TNIP TA+A+DLL F ESKLGP+SVFAIEISTDR NWKSRGFGRVQF+ +A
Sbjct: 7 ERPTLRLTNIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAPQAM 66
Query: 248 SRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMSVLES 69
S A LS + L+F S +L++S ++DII RP+ +R+DGGVLH GF+ +D + VLE
Sbjct: 67 SDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGGVLHAGFMSSDDCLRVLER 126
Query: 68 WKGVRAWVMPERRKIEFWVW 9
W+GVR W+MPERR++EFWVW
Sbjct: 127 WEGVRGWIMPERRRLEFWVW 146
>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 188 bits (478), Expect = 1e-45
Identities = 87/140 (62%), Positives = 112/140 (80%)
Frame = -1
Query: 428 DRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTIEAK 249
+RPT+R+TNIP TA+A+DLL F ESKLGP+SVFAIEISTDR NWKSRGFGRVQF+ +A
Sbjct: 7 ERPTLRLTNIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAPQAM 66
Query: 248 SRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMSVLES 69
S A LS + L+F S +L++S ++DII RP+ +R+DGGVLH GF+ +D + VLE
Sbjct: 67 SDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGGVLHAGFMSSDDCLRVLER 126
Query: 68 WKGVRAWVMPERRKIEFWVW 9
W+GVR W+MPERR++EFWVW
Sbjct: 127 WEGVRGWIMPERRRLEFWVW 146
>ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Jatropha
curcas] gi|643720862|gb|KDP31126.1| hypothetical protein
JCGZ_11502 [Jatropha curcas]
Length = 1122
Score = 186 bits (471), Expect = 8e-45
Identities = 86/144 (59%), Positives = 115/144 (79%)
Frame = -1
Query: 440 MAVEDRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFST 261
+ V +RPT R+T+IP T IAEDLL +LES+LG +SVFAIEI T+RKNWKSRGFGRVQFST
Sbjct: 5 VVVVERPTARLTSIPQTVIAEDLLQYLESQLGQDSVFAIEICTERKNWKSRGFGRVQFST 64
Query: 260 IEAKSRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMS 81
+E + +A SL L+N LVF S L +S+ ++DII RP+ P++R + GVL+ GF+ +E +
Sbjct: 65 LEFRHKAQSLCLQNKLVFKSHYLLVSDTYDDIIPRPIKPQHRQENGVLYAGFMKQERCLC 124
Query: 80 VLESWKGVRAWVMPERRKIEFWVW 9
VLESW+ VR W+MPERR++EFW+W
Sbjct: 125 VLESWEDVRGWLMPERRRVEFWLW 148
>gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sinensis]
Length = 1131
Score = 184 bits (468), Expect = 2e-44
Identities = 86/137 (62%), Positives = 115/137 (83%)
Frame = -1
Query: 419 TVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTIEAKSRA 240
TV V+NIP TAIA+DLL FLESKLG NSVFA+EI TDR NWKSRG GRVQF++++ KS+A
Sbjct: 5 TVWVSNIPQTAIAKDLLLFLESKLGKNSVFALEIITDRSNWKSRGIGRVQFTSLDFKSKA 64
Query: 239 HSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMSVLESWKG 60
+LSL + LVF+S+NL+ISE H DI+ RPV ++RV+ GVLHVG + KE+ + VL++++G
Sbjct: 65 QNLSLNDKLVFNSQNLKISETHSDIVPRPVKAQHRVEDGVLHVGVMCKEERLRVLQTFEG 124
Query: 59 VRAWVMPERRKIEFWVW 9
VR W++P+RR++EFWVW
Sbjct: 125 VRGWLLPDRRRLEFWVW 141
>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
Length = 1131
Score = 184 bits (468), Expect = 2e-44
Identities = 86/137 (62%), Positives = 115/137 (83%)
Frame = -1
Query: 419 TVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTIEAKSRA 240
TV V+NIP TAIA+DLL FLESKLG NSVFA+EI TDR NWKSRG GRVQF++++ KS+A
Sbjct: 5 TVWVSNIPQTAIAKDLLLFLESKLGKNSVFALEIITDRSNWKSRGIGRVQFTSLDFKSKA 64
Query: 239 HSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMSVLESWKG 60
+LSL + LVF+S+NL+ISE H DI+ RPV ++RV+ GVLHVG + KE+ + VL++++G
Sbjct: 65 QNLSLNDKLVFNSQNLKISETHSDIVPRPVKAQHRVEDGVLHVGVMCKEERLRVLQTFEG 124
Query: 59 VRAWVMPERRKIEFWVW 9
VR W++P+RR++EFWVW
Sbjct: 125 VRGWLLPDRRRLEFWVW 141
>ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 2
[Prunus mume]
Length = 1100
Score = 182 bits (463), Expect = 7e-44
Identities = 89/144 (61%), Positives = 110/144 (76%)
Frame = -1
Query: 440 MAVEDRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFST 261
MAV +RPTVRV+NIP T A++LL+FLESKLGP+SVFA+EI +D KNWKSRGFGRVQF+
Sbjct: 1 MAVAERPTVRVSNIPQTVTAKELLSFLESKLGPDSVFAVEIISDHKNWKSRGFGRVQFTN 60
Query: 260 IEAKSRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMS 81
EAKS +SE ++DII RPVDP+ R++G VLH GF+VK D MS
Sbjct: 61 HEAKS------------------ELSETYDDIIQRPVDPKRRLNGTVLHAGFMVKGDCMS 102
Query: 80 VLESWKGVRAWVMPERRKIEFWVW 9
+LESW+GVRAWVMPER+++EFWVW
Sbjct: 103 MLESWEGVRAWVMPERKRVEFWVW 126
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 182 bits (463), Expect = 7e-44
Identities = 88/141 (62%), Positives = 113/141 (80%)
Frame = -1
Query: 434 VEDRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTIE 255
V +RP+VRVTNIP T A+++L +L ++LG +SVFAIEIST RKNW SRGFGRVQFS++E
Sbjct: 4 VAERPSVRVTNIPQTITAKEILQYLVAQLGKDSVFAIEISTVRKNWNSRGFGRVQFSSLE 63
Query: 254 AKSRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMSVL 75
K A SLSLKN LV S+NL++SE ++DII RPV +NR++ GVL+VGF+ KE + VL
Sbjct: 64 VKHEALSLSLKNKLVLKSQNLKLSETYDDIIPRPVKDQNRMENGVLYVGFMKKETTLCVL 123
Query: 74 ESWKGVRAWVMPERRKIEFWV 12
E W+GVR W MPERR+IEFW+
Sbjct: 124 EYWEGVRGWFMPERRRIEFWI 144
>ref|XP_011028594.1| PREDICTED: RNA-dependent RNA polymerase 2 [Populus euphratica]
Length = 1105
Score = 174 bits (440), Expect = 3e-41
Identities = 83/139 (59%), Positives = 110/139 (79%)
Frame = -1
Query: 428 DRPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTIEAK 249
+RP+VRVTNIP T A+++L +L ++LG +SVFAIEIST RKNW SRGFGRVQF+++E K
Sbjct: 6 ERPSVRVTNIPQTITAQEILQYLVAQLGKDSVFAIEISTVRKNWNSRGFGRVQFASLEVK 65
Query: 248 SRAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKEDLMSVLES 69
A SLSL+N LV S+NL++SE +DII RPV +NR++ GVL+ GF+ K+ + VLE
Sbjct: 66 HEALSLSLQNKLVLKSQNLKLSETCDDIIPRPVMDQNRMENGVLYAGFMKKDTTLCVLEY 125
Query: 68 WKGVRAWVMPERRKIEFWV 12
W+GVR W MPERR+IEFW+
Sbjct: 126 WEGVRGWFMPERRRIEFWI 144
>ref|XP_013612295.1| PREDICTED: RNA-dependent RNA polymerase 2 [Brassica oleracea var.
oleracea]
Length = 1125
Score = 169 bits (428), Expect = 7e-40
Identities = 80/142 (56%), Positives = 106/142 (74%), Gaps = 1/142 (0%)
Frame = -1
Query: 425 RPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTIEAKS 246
R TV++TN+P T +AE+LL FLE LG +SVFA+EI T R NWK R F VQF+++EAKS
Sbjct: 7 RSTVKLTNVPQTIVAEELLRFLELHLGADSVFALEIPTSRDNWKPRDFALVQFTSLEAKS 66
Query: 245 RAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGF-VVKEDLMSVLES 69
RA LS ++ L+F SRNLR+SE ++DI+ RPVDPR R+DG VL GF +E LE
Sbjct: 67 RAQHLSSQSKLLFKSRNLRVSEAYDDIVPRPVDPRRRLDGDVLTAGFPEAEEGRFCALEK 126
Query: 68 WKGVRAWVMPERRKIEFWVWQS 3
W+GVR WV+ E+R++EFW+W+S
Sbjct: 127 WEGVRCWVIEEKRRVEFWIWES 148
>emb|CDX86814.1| BnaA09g22040D [Brassica napus]
Length = 1129
Score = 169 bits (428), Expect = 7e-40
Identities = 82/142 (57%), Positives = 106/142 (74%), Gaps = 1/142 (0%)
Frame = -1
Query: 425 RPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTIEAKS 246
R TV++TN+P T IAE+LL FLE LG +SVFA+EI T R NWK R F VQF+++EAKS
Sbjct: 7 RSTVKLTNVPQTIIAEELLRFLELHLGADSVFALEIPTSRDNWKPRDFALVQFTSLEAKS 66
Query: 245 RAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGFVVKED-LMSVLES 69
RA LS ++ L+F SRNLR+SE ++DI+ RPVDPR R+DG VL GF E+ LE
Sbjct: 67 RAQHLSSQSKLLFKSRNLRVSEAYDDIVPRPVDPRRRLDGVVLTAGFPESEEGRFCALEK 126
Query: 68 WKGVRAWVMPERRKIEFWVWQS 3
W+GVR WV+ E+R++EFWVW+S
Sbjct: 127 WEGVRCWVIEEKRRVEFWVWES 148
>ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, partial [Capsella rubella]
gi|482555639|gb|EOA19831.1| hypothetical protein
CARUB_v10000076mg, partial [Capsella rubella]
Length = 1165
Score = 168 bits (425), Expect = 2e-39
Identities = 80/142 (56%), Positives = 107/142 (75%), Gaps = 1/142 (0%)
Frame = -1
Query: 425 RPTVRVTNIPHTAIAEDLLTFLESKLGPNSVFAIEISTDRKNWKSRGFGRVQFSTIEAKS 246
RPTV+V+N+P T +A++LL FLE LG ++VFAIEI T R+NWK R F RVQF+T+E KS
Sbjct: 40 RPTVKVSNLPQTIVADELLRFLELHLGEDTVFAIEIPTTRENWKPRDFARVQFTTLEVKS 99
Query: 245 RAHSLSLKNDLVFHSRNLRISEYHEDIIVRPVDPRNRVDGGVLHVGF-VVKEDLMSVLES 69
RA LS ++ L+F + NLR+SE ++DII RPVDPR R+D VL VGF E+ LE
Sbjct: 100 RAQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDVVLTVGFPESSEERFCALEK 159
Query: 68 WKGVRAWVMPERRKIEFWVWQS 3
W+GVR W++ E+R++EFWVW+S
Sbjct: 160 WEGVRCWILEEKRRVEFWVWES 181