BLASTX nr result
ID: Ziziphus21_contig00021840
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00021840
(215 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AII18680.1| RNA polymerase beta' subunit, partial (chloroplas... 140 5e-31
gb|AII18675.1| RNA polymerase beta' subunit, partial (chloroplas... 140 5e-31
gb|AII18667.1| RNA polymerase beta' subunit, partial (chloroplas... 140 5e-31
gb|AII18666.1| RNA polymerase beta' subunit, partial (chloroplas... 140 5e-31
gb|AEI27569.1| RNA polymerase beta subunit [Sanguisorba sitchensis] 140 5e-31
gb|ABV65718.1| RNA polymerase beta'' subunit, partial (chloropla... 140 5e-31
gb|AEI27558.1| RNA polymerase beta subunit [Dirachma socotrana] 139 6e-31
gb|ABV65790.1| RNA polymerase beta'' subunit, partial (chloropla... 139 6e-31
gb|AKZ23934.1| RNA polymerase beta'' subunit (plastid) [Penstemo... 139 1e-30
gb|AKZ23933.1| RNA polymerase beta'' subunit (plastid) [Penstemo... 139 1e-30
gb|AII18685.1| RNA polymerase beta' subunit, partial (chloroplas... 139 1e-30
gb|AII18682.1| RNA polymerase beta' subunit, partial (chloroplas... 139 1e-30
gb|AII18681.1| RNA polymerase beta' subunit, partial (chloroplas... 139 1e-30
gb|AII18679.1| RNA polymerase beta' subunit, partial (chloroplas... 139 1e-30
gb|AII18678.1| RNA polymerase beta' subunit, partial (chloroplas... 139 1e-30
gb|AII18677.1| RNA polymerase beta' subunit, partial (chloroplas... 139 1e-30
gb|AII18676.1| RNA polymerase beta' subunit, partial (chloroplas... 139 1e-30
gb|AII18674.1| RNA polymerase beta' subunit, partial (chloroplas... 139 1e-30
gb|AII18673.1| RNA polymerase beta' subunit, partial (chloroplas... 139 1e-30
gb|AII18672.1| RNA polymerase beta' subunit, partial (chloroplas... 139 1e-30
>gb|AII18680.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
punctatum]
Length = 1413
Score = 140 bits (352), Expect = 5e-31
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIYIG
Sbjct: 250 GRVLADDIYIG 260
>gb|AII18675.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lentago]
Length = 1384
Score = 140 bits (352), Expect = 5e-31
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIYIG
Sbjct: 250 GRVLADDIYIG 260
>gb|AII18667.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
cassinoides]
Length = 1384
Score = 140 bits (352), Expect = 5e-31
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIYIG
Sbjct: 250 GRVLADDIYIG 260
>gb|AII18666.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
carlesii]
Length = 1384
Score = 140 bits (352), Expect = 5e-31
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIYIG
Sbjct: 250 GRVLADDIYIG 260
>gb|AEI27569.1| RNA polymerase beta subunit [Sanguisorba sitchensis]
Length = 1244
Score = 140 bits (352), Expect = 5e-31
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 145 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 204
Query: 35 GRVLADDIYIG 3
GRVLADDIYIG
Sbjct: 205 GRVLADDIYIG 215
>gb|ABV65718.1| RNA polymerase beta'' subunit, partial (chloroplast) [Ceanothus
prostratus]
Length = 1281
Score = 140 bits (352), Expect = 5e-31
Identities = 70/71 (98%), Positives = 70/71 (98%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGT QGISVSPRNGMMPERIFIQTLI
Sbjct: 159 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTTQGISVSPRNGMMPERIFIQTLI 218
Query: 35 GRVLADDIYIG 3
GRVLADDIYIG
Sbjct: 219 GRVLADDIYIG 229
>gb|AEI27558.1| RNA polymerase beta subunit [Dirachma socotrana]
Length = 1252
Score = 139 bits (351), Expect = 6e-31
Identities = 69/71 (97%), Positives = 70/71 (98%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGT QGISVSPRNGMMPERIFIQTLI
Sbjct: 145 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTTQGISVSPRNGMMPERIFIQTLI 204
Query: 35 GRVLADDIYIG 3
GRVLADD+YIG
Sbjct: 205 GRVLADDVYIG 215
>gb|ABV65790.1| RNA polymerase beta'' subunit, partial (chloroplast) [Zelkova
serrata]
Length = 1247
Score = 139 bits (351), Expect = 6e-31
Identities = 70/71 (98%), Positives = 70/71 (98%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGT QGISVSPRNGMMPERIFIQTLI
Sbjct: 138 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIQGISVSPRNGMMPERIFIQTLI 197
Query: 35 GRVLADDIYIG 3
GRVLADDIYIG
Sbjct: 198 GRVLADDIYIG 208
>gb|AKZ23934.1| RNA polymerase beta'' subunit (plastid) [Penstemon gracilis]
Length = 1389
Score = 139 bits (349), Expect = 1e-30
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIY+G
Sbjct: 250 GRVLADDIYMG 260
>gb|AKZ23933.1| RNA polymerase beta'' subunit (plastid) [Penstemon angustifolius]
Length = 1389
Score = 139 bits (349), Expect = 1e-30
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIY+G
Sbjct: 250 GRVLADDIYMG 260
>gb|AII18685.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
vernicosum]
Length = 1361
Score = 139 bits (349), Expect = 1e-30
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 181 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 240
Query: 35 GRVLADDIYIG 3
GRVLADDIY+G
Sbjct: 241 GRVLADDIYMG 251
>gb|AII18682.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
taiwanianum]
Length = 1384
Score = 139 bits (349), Expect = 1e-30
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIY+G
Sbjct: 250 GRVLADDIYMG 260
>gb|AII18681.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
sieboldii]
Length = 1384
Score = 139 bits (349), Expect = 1e-30
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIY+G
Sbjct: 250 GRVLADDIYMG 260
>gb|AII18679.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
plicatum]
Length = 1384
Score = 139 bits (349), Expect = 1e-30
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIY+G
Sbjct: 250 GRVLADDIYMG 260
>gb|AII18678.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
opulus]
Length = 1384
Score = 139 bits (349), Expect = 1e-30
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIY+G
Sbjct: 250 GRVLADDIYMG 260
>gb|AII18677.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
molle]
Length = 1384
Score = 139 bits (349), Expect = 1e-30
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIY+G
Sbjct: 250 GRVLADDIYMG 260
>gb|AII18676.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lutescens]
Length = 1384
Score = 139 bits (349), Expect = 1e-30
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIY+G
Sbjct: 250 GRVLADDIYMG 260
>gb|AII18674.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lantanoides]
Length = 1384
Score = 139 bits (349), Expect = 1e-30
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIY+G
Sbjct: 250 GRVLADDIYMG 260
>gb|AII18673.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
grandiflorum]
Length = 1384
Score = 139 bits (349), Expect = 1e-30
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIY+G
Sbjct: 250 GRVLADDIYMG 260
>gb|AII18672.1| RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
erubescens]
Length = 1384
Score = 139 bits (349), Expect = 1e-30
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = -1
Query: 215 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTAQGISVSPRNGMMPERIFIQTLI 36
RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTA+GISVSPRNGMMPERIFIQTLI
Sbjct: 190 RKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFIQTLI 249
Query: 35 GRVLADDIYIG 3
GRVLADDIY+G
Sbjct: 250 GRVLADDIYMG 260