BLASTX nr result
ID: Ziziphus21_contig00021556
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00021556
(874 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 431 e-118
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun... 427 e-117
ref|XP_011463808.1| PREDICTED: DNA-directed RNA polymerase IV su... 416 e-113
ref|XP_011463806.1| PREDICTED: DNA-directed RNA polymerase IV su... 416 e-113
ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV su... 415 e-113
ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV su... 415 e-113
gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium r... 415 e-113
ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV su... 415 e-113
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su... 415 e-113
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su... 415 e-113
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su... 415 e-113
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 415 e-113
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 412 e-112
ref|XP_008358315.1| PREDICTED: DNA-directed RNA polymerase IV su... 411 e-112
ref|XP_009377912.1| PREDICTED: DNA-directed RNA polymerase IV su... 410 e-112
gb|KDO63581.1| hypothetical protein CISIN_1g0005253mg, partial [... 404 e-110
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr... 404 e-110
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su... 399 e-108
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su... 399 e-108
ref|XP_012488706.1| PREDICTED: DNA-directed RNA polymerase IV su... 392 e-106
>ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV
subunit 1 [Prunus mume]
Length = 1452
Score = 431 bits (1109), Expect = e-118
Identities = 213/301 (70%), Positives = 249/301 (82%), Gaps = 14/301 (4%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNL KLVQ+ MCLGLQHSLIPLSF +P+QLSC AWNN KAC L QKV+ + + +S
Sbjct: 724 AGSKGNLQKLVQHSMCLGLQHSLIPLSFRIPNQLSCAAWNNQKACSLIQKVEGTYECVES 783
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVESSFL+GLNPLECFVHSVT RDSSFS NA+LPGTL R+LM+ +RDLY AYDGT
Sbjct: 784 YIPSAVVESSFLTGLNPLECFVHSVTSRDSSFSGNADLPGTLTRKLMFLMRDLYTAYDGT 843
Query: 514 VRNAYGNQLVQFAYSSDVP--------------VCNVLGSEPVGSLSACAISEAAYSALD 377
VRNAYGNQLVQF+Y D+ C+ +G +PVGSLSACA+SEAAYSALD
Sbjct: 844 VRNAYGNQLVQFSYDIDMDKSDSTSTSYAKSTTACDGIGGQPVGSLSACALSEAAYSALD 903
Query: 376 QPISVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEGL 197
QP+S+LETSPLLNLK +LECGSKKSSA QTMSL+LSE+LGR+RHGFEYGALEVK+HL GL
Sbjct: 904 QPVSLLETSPLLNLKNILECGSKKSSAKQTMSLFLSEKLGRRRHGFEYGALEVKNHLVGL 963
Query: 196 IFSEVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSAQT 17
FS++VSTVMI+FS Q S+ SPWV HFHICK+I+R+RRL VHS++DSL+ RC SA+
Sbjct: 964 TFSDIVSTVMIIFSSQNNSQKRFSPWVTHFHICKEIVRKRRLKVHSVVDSLYARCNSARP 1023
Query: 16 E 14
E
Sbjct: 1024 E 1024
>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
gi|462406650|gb|EMJ12114.1| hypothetical protein
PRUPE_ppa000278mg [Prunus persica]
Length = 1356
Score = 427 bits (1099), Expect = e-117
Identities = 210/301 (69%), Positives = 250/301 (83%), Gaps = 14/301 (4%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNL KLVQ+ MCLGLQHSLIPLSF +P+QLSC AWNN KAC L QKV+ + + +S
Sbjct: 631 AGSKGNLQKLVQHSMCLGLQHSLIPLSFRIPNQLSCAAWNNQKACSLIQKVEGTYECVES 690
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVV+SSFL+GLNPLECFVHSVT RDSSFS NA+LPGTL R+LM+ +RDLY AYDGT
Sbjct: 691 YIPSAVVKSSFLTGLNPLECFVHSVTSRDSSFSGNADLPGTLTRKLMFLMRDLYTAYDGT 750
Query: 514 VRNAYGNQLVQFAYSSDVP--------------VCNVLGSEPVGSLSACAISEAAYSALD 377
VRNAYGNQLVQF+Y D+ C+ +G +PVGSLSACA+SEAAYSALD
Sbjct: 751 VRNAYGNQLVQFSYDIDMDKSDSTSTSHAKSTTACDGIGGQPVGSLSACALSEAAYSALD 810
Query: 376 QPISVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEGL 197
QP+S+LETSPLLNLK +LECGSKKSSA QT+SL+LS++LGR+RHGFEYGALEVK+HL GL
Sbjct: 811 QPVSLLETSPLLNLKNILECGSKKSSAKQTLSLFLSKKLGRRRHGFEYGALEVKNHLVGL 870
Query: 196 IFSEVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSAQT 17
FS++VSTVMI+FS Q+ S+ SPWV HFHICK+I+R+RRL VHS++DSL+ RC SA+
Sbjct: 871 TFSDIVSTVMIIFSSQSNSQKRFSPWVTHFHICKEIVRKRRLKVHSVVDSLYARCNSARP 930
Query: 16 E 14
E
Sbjct: 931 E 931
>ref|XP_011463808.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Fragaria vesca subsp. vesca]
Length = 1314
Score = 416 bits (1068), Expect = e-113
Identities = 208/299 (69%), Positives = 246/299 (82%), Gaps = 15/299 (5%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGN+LKLVQ+CMCLGLQHSL+PLSF P+QLSC AWN+ KA G+ Q+V + + +S
Sbjct: 593 AGSKGNMLKLVQHCMCLGLQHSLVPLSFKFPNQLSCDAWNDQKARGIVQEVGRNFESIES 652
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVV+SSFL+GLNP+ECFVHSVT RD SFS+NAELPGTL+R+LMYF+RDL+ AYDGT
Sbjct: 653 YIPSAVVKSSFLTGLNPVECFVHSVTSRDGSFSNNAELPGTLNRKLMYFMRDLHTAYDGT 712
Query: 514 VRNAYGNQLVQFAYSSDV---------------PVCNVLGSEPVGSLSACAISEAAYSAL 380
VRNAYGNQL+QF+Y D V N GS+PVG+LSACAISEAAYSAL
Sbjct: 713 VRNAYGNQLIQFSYDIDEGISTADSTTNSSYAKSVINCGGSQPVGALSACAISEAAYSAL 772
Query: 379 DQPISVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEG 200
DQP+S+LE SPLLNLK +LECGSK+SSA QTMSL+LS++L R RHGFEYGALEVK+HLEG
Sbjct: 773 DQPVSLLEASPLLNLKNILECGSKRSSAKQTMSLFLSDKLDRHRHGFEYGALEVKNHLEG 832
Query: 199 LIFSEVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSA 23
L FS++VSTVMIMFS Q+GSK SPWV HFHI K+I+RRRRLNV SII++L+ C SA
Sbjct: 833 LNFSDIVSTVMIMFSSQSGSKMRFSPWVSHFHISKEIVRRRRLNVQSIIEALYAMCNSA 891
>ref|XP_011463806.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Fragaria vesca subsp. vesca]
gi|764580245|ref|XP_011463807.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1 isoform X1 [Fragaria vesca
subsp. vesca]
Length = 1444
Score = 416 bits (1068), Expect = e-113
Identities = 208/299 (69%), Positives = 246/299 (82%), Gaps = 15/299 (5%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGN+LKLVQ+CMCLGLQHSL+PLSF P+QLSC AWN+ KA G+ Q+V + + +S
Sbjct: 723 AGSKGNMLKLVQHCMCLGLQHSLVPLSFKFPNQLSCDAWNDQKARGIVQEVGRNFESIES 782
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVV+SSFL+GLNP+ECFVHSVT RD SFS+NAELPGTL+R+LMYF+RDL+ AYDGT
Sbjct: 783 YIPSAVVKSSFLTGLNPVECFVHSVTSRDGSFSNNAELPGTLNRKLMYFMRDLHTAYDGT 842
Query: 514 VRNAYGNQLVQFAYSSDV---------------PVCNVLGSEPVGSLSACAISEAAYSAL 380
VRNAYGNQL+QF+Y D V N GS+PVG+LSACAISEAAYSAL
Sbjct: 843 VRNAYGNQLIQFSYDIDEGISTADSTTNSSYAKSVINCGGSQPVGALSACAISEAAYSAL 902
Query: 379 DQPISVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEG 200
DQP+S+LE SPLLNLK +LECGSK+SSA QTMSL+LS++L R RHGFEYGALEVK+HLEG
Sbjct: 903 DQPVSLLEASPLLNLKNILECGSKRSSAKQTMSLFLSDKLDRHRHGFEYGALEVKNHLEG 962
Query: 199 LIFSEVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSA 23
L FS++VSTVMIMFS Q+GSK SPWV HFHI K+I+RRRRLNV SII++L+ C SA
Sbjct: 963 LNFSDIVSTVMIMFSSQSGSKMRFSPWVSHFHISKEIVRRRRLNVQSIIEALYAMCNSA 1021
>ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
[Gossypium raimondii]
Length = 1300
Score = 415 bits (1067), Expect = e-113
Identities = 210/302 (69%), Positives = 244/302 (80%), Gaps = 17/302 (5%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ+ MCLGLQHSL+PLSF PHQLSC AWNN K+ LTQKVD + + K
Sbjct: 745 AGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKK 804
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVESSF+ GLNPLECFVHSVT RD+SFSDNA+LPGTL RRLM+F+RDL AAYDGT
Sbjct: 805 YIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCAAYDGT 864
Query: 514 VRNAYGNQLVQFAYSSDVPVCNV-----------------LGSEPVGSLSACAISEAAYS 386
VRNAYG+Q+VQF Y+ D + +G +PVGSLSACAISEAAYS
Sbjct: 865 VRNAYGDQVVQFCYNIDKGTFSPTSCPDKLVSQGSSLPDGIGGQPVGSLSACAISEAAYS 924
Query: 385 ALDQPISVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHL 206
ALDQPIS+LE+SPLLNLKRVLECGSK+S+ADQTMSL+LS +L R+RHG EYGALEVK+HL
Sbjct: 925 ALDQPISLLESSPLLNLKRVLECGSKRSNADQTMSLFLSGKLVRRRHGQEYGALEVKNHL 984
Query: 205 EGLIFSEVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKS 26
E LIF ++VSTV I+FSPQ S+ SPWVCHFH+ KDI+ RRRL VHSIID+LH+ C +
Sbjct: 985 ERLIFKDIVSTVSIIFSPQMSSENRFSPWVCHFHVFKDIVTRRRLTVHSIIDALHMHCTN 1044
Query: 25 AQ 20
A+
Sbjct: 1045 AK 1046
>ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Gossypium raimondii]
Length = 1340
Score = 415 bits (1067), Expect = e-113
Identities = 210/302 (69%), Positives = 244/302 (80%), Gaps = 17/302 (5%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ+ MCLGLQHSL+PLSF PHQLSC AWNN K+ LTQKVD + + K
Sbjct: 604 AGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKK 663
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVESSF+ GLNPLECFVHSVT RD+SFSDNA+LPGTL RRLM+F+RDL AAYDGT
Sbjct: 664 YIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCAAYDGT 723
Query: 514 VRNAYGNQLVQFAYSSDVPVCNV-----------------LGSEPVGSLSACAISEAAYS 386
VRNAYG+Q+VQF Y+ D + +G +PVGSLSACAISEAAYS
Sbjct: 724 VRNAYGDQVVQFCYNIDKGTFSPTSCPDKLVSQGSSLPDGIGGQPVGSLSACAISEAAYS 783
Query: 385 ALDQPISVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHL 206
ALDQPIS+LE+SPLLNLKRVLECGSK+S+ADQTMSL+LS +L R+RHG EYGALEVK+HL
Sbjct: 784 ALDQPISLLESSPLLNLKRVLECGSKRSNADQTMSLFLSGKLVRRRHGQEYGALEVKNHL 843
Query: 205 EGLIFSEVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKS 26
E LIF ++VSTV I+FSPQ S+ SPWVCHFH+ KDI+ RRRL VHSIID+LH+ C +
Sbjct: 844 ERLIFKDIVSTVSIIFSPQMSSENRFSPWVCHFHVFKDIVTRRRLTVHSIIDALHMHCTN 903
Query: 25 AQ 20
A+
Sbjct: 904 AK 905
>gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium raimondii]
Length = 1478
Score = 415 bits (1067), Expect = e-113
Identities = 210/302 (69%), Positives = 244/302 (80%), Gaps = 17/302 (5%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ+ MCLGLQHSL+PLSF PHQLSC AWNN K+ LTQKVD + + K
Sbjct: 742 AGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKK 801
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVESSF+ GLNPLECFVHSVT RD+SFSDNA+LPGTL RRLM+F+RDL AAYDGT
Sbjct: 802 YIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCAAYDGT 861
Query: 514 VRNAYGNQLVQFAYSSDVPVCNV-----------------LGSEPVGSLSACAISEAAYS 386
VRNAYG+Q+VQF Y+ D + +G +PVGSLSACAISEAAYS
Sbjct: 862 VRNAYGDQVVQFCYNIDKGTFSPTSCPDKLVSQGSSLPDGIGGQPVGSLSACAISEAAYS 921
Query: 385 ALDQPISVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHL 206
ALDQPIS+LE+SPLLNLKRVLECGSK+S+ADQTMSL+LS +L R+RHG EYGALEVK+HL
Sbjct: 922 ALDQPISLLESSPLLNLKRVLECGSKRSNADQTMSLFLSGKLVRRRHGQEYGALEVKNHL 981
Query: 205 EGLIFSEVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKS 26
E LIF ++VSTV I+FSPQ S+ SPWVCHFH+ KDI+ RRRL VHSIID+LH+ C +
Sbjct: 982 ERLIFKDIVSTVSIIFSPQMSSENRFSPWVCHFHVFKDIVTRRRLTVHSIIDALHMHCTN 1041
Query: 25 AQ 20
A+
Sbjct: 1042 AK 1043
>ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Gossypium raimondii] gi|823152441|ref|XP_012476046.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X1 [Gossypium raimondii]
gi|763758424|gb|KJB25755.1| hypothetical protein
B456_004G207300 [Gossypium raimondii]
gi|763758426|gb|KJB25757.1| hypothetical protein
B456_004G207300 [Gossypium raimondii]
Length = 1481
Score = 415 bits (1067), Expect = e-113
Identities = 210/302 (69%), Positives = 244/302 (80%), Gaps = 17/302 (5%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ+ MCLGLQHSL+PLSF PHQLSC AWNN K+ LTQKVD + + K
Sbjct: 745 AGSKGNLLKLVQHSMCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKK 804
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVESSF+ GLNPLECFVHSVT RD+SFSDNA+LPGTL RRLM+F+RDL AAYDGT
Sbjct: 805 YIPYAVVESSFVKGLNPLECFVHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCAAYDGT 864
Query: 514 VRNAYGNQLVQFAYSSDVPVCNV-----------------LGSEPVGSLSACAISEAAYS 386
VRNAYG+Q+VQF Y+ D + +G +PVGSLSACAISEAAYS
Sbjct: 865 VRNAYGDQVVQFCYNIDKGTFSPTSCPDKLVSQGSSLPDGIGGQPVGSLSACAISEAAYS 924
Query: 385 ALDQPISVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHL 206
ALDQPIS+LE+SPLLNLKRVLECGSK+S+ADQTMSL+LS +L R+RHG EYGALEVK+HL
Sbjct: 925 ALDQPISLLESSPLLNLKRVLECGSKRSNADQTMSLFLSGKLVRRRHGQEYGALEVKNHL 984
Query: 205 EGLIFSEVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKS 26
E LIF ++VSTV I+FSPQ S+ SPWVCHFH+ KDI+ RRRL VHSIID+LH+ C +
Sbjct: 985 ERLIFKDIVSTVSIIFSPQMSSENRFSPWVCHFHVFKDIVTRRRLTVHSIIDALHMHCTN 1044
Query: 25 AQ 20
A+
Sbjct: 1045 AK 1046
>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis
vinifera]
Length = 1354
Score = 415 bits (1067), Expect = e-113
Identities = 207/298 (69%), Positives = 249/298 (83%), Gaps = 11/298 (3%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ +CLGLQHSL+PLSF +PHQLSC AWN K GL Q D S +Y +S
Sbjct: 625 AGSKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQN-DTS-EYAES 682
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVE+SFL GLNPLECFVHSVT RDSSFSDNA+LPGTL RRLM+F+RDLY AYDGT
Sbjct: 683 YIPYAVVENSFLMGLNPLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGT 742
Query: 514 VRNAYGNQLVQFAYS---SDVPVCNV--------LGSEPVGSLSACAISEAAYSALDQPI 368
VRNAYGNQLVQF+Y+ + P + +G +PVGS+SACAISEAAYSALDQPI
Sbjct: 743 VRNAYGNQLVQFSYNIEHTSTPSDGINEDTCAYDMGGQPVGSISACAISEAAYSALDQPI 802
Query: 367 SVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEGLIFS 188
S+LE SPLLNLKRVLECG +KS+AD+T+SL+LS++L +++HGFEYGALEVK+HLE L+FS
Sbjct: 803 SLLEPSPLLNLKRVLECGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFS 862
Query: 187 EVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSAQTE 14
++VSTVMI+FSPQ GSKT SPWVCHFH+C++I ++R L HSIID+L+++C SA+ E
Sbjct: 863 DIVSTVMIVFSPQNGSKTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAE 920
>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis
vinifera]
Length = 1458
Score = 415 bits (1067), Expect = e-113
Identities = 207/298 (69%), Positives = 249/298 (83%), Gaps = 11/298 (3%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ +CLGLQHSL+PLSF +PHQLSC AWN K GL Q D S +Y +S
Sbjct: 731 AGSKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQN-DTS-EYAES 788
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVE+SFL GLNPLECFVHSVT RDSSFSDNA+LPGTL RRLM+F+RDLY AYDGT
Sbjct: 789 YIPYAVVENSFLMGLNPLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGT 848
Query: 514 VRNAYGNQLVQFAYS---SDVPVCNV--------LGSEPVGSLSACAISEAAYSALDQPI 368
VRNAYGNQLVQF+Y+ + P + +G +PVGS+SACAISEAAYSALDQPI
Sbjct: 849 VRNAYGNQLVQFSYNIEHTSTPSDGINEDTCAYDMGGQPVGSISACAISEAAYSALDQPI 908
Query: 367 SVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEGLIFS 188
S+LE SPLLNLKRVLECG +KS+AD+T+SL+LS++L +++HGFEYGALEVK+HLE L+FS
Sbjct: 909 SLLEPSPLLNLKRVLECGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFS 968
Query: 187 EVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSAQTE 14
++VSTVMI+FSPQ GSKT SPWVCHFH+C++I ++R L HSIID+L+++C SA+ E
Sbjct: 969 DIVSTVMIVFSPQNGSKTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAE 1026
>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis
vinifera]
Length = 1460
Score = 415 bits (1067), Expect = e-113
Identities = 207/298 (69%), Positives = 249/298 (83%), Gaps = 11/298 (3%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ +CLGLQHSL+PLSF +PHQLSC AWN K GL Q D S +Y +S
Sbjct: 731 AGSKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQN-DTS-EYAES 788
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVE+SFL GLNPLECFVHSVT RDSSFSDNA+LPGTL RRLM+F+RDLY AYDGT
Sbjct: 789 YIPYAVVENSFLMGLNPLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGT 848
Query: 514 VRNAYGNQLVQFAYS---SDVPVCNV--------LGSEPVGSLSACAISEAAYSALDQPI 368
VRNAYGNQLVQF+Y+ + P + +G +PVGS+SACAISEAAYSALDQPI
Sbjct: 849 VRNAYGNQLVQFSYNIEHTSTPSDGINEDTCAYDMGGQPVGSISACAISEAAYSALDQPI 908
Query: 367 SVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEGLIFS 188
S+LE SPLLNLKRVLECG +KS+AD+T+SL+LS++L +++HGFEYGALEVK+HLE L+FS
Sbjct: 909 SLLEPSPLLNLKRVLECGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFS 968
Query: 187 EVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSAQTE 14
++VSTVMI+FSPQ GSKT SPWVCHFH+C++I ++R L HSIID+L+++C SA+ E
Sbjct: 969 DIVSTVMIVFSPQNGSKTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAE 1026
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 415 bits (1067), Expect = e-113
Identities = 207/298 (69%), Positives = 249/298 (83%), Gaps = 11/298 (3%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ +CLGLQHSL+PLSF +PHQLSC AWN K GL Q D S +Y +S
Sbjct: 633 AGSKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQN-DTS-EYAES 690
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVE+SFL GLNPLECFVHSVT RDSSFSDNA+LPGTL RRLM+F+RDLY AYDGT
Sbjct: 691 YIPYAVVENSFLMGLNPLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGT 750
Query: 514 VRNAYGNQLVQFAYS---SDVPVCNV--------LGSEPVGSLSACAISEAAYSALDQPI 368
VRNAYGNQLVQF+Y+ + P + +G +PVGS+SACAISEAAYSALDQPI
Sbjct: 751 VRNAYGNQLVQFSYNIEHTSTPSDGINEDTCAYDMGGQPVGSISACAISEAAYSALDQPI 810
Query: 367 SVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEGLIFS 188
S+LE SPLLNLKRVLECG +KS+AD+T+SL+LS++L +++HGFEYGALEVK+HLE L+FS
Sbjct: 811 SLLEPSPLLNLKRVLECGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFS 870
Query: 187 EVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSAQTE 14
++VSTVMI+FSPQ GSKT SPWVCHFH+C++I ++R L HSIID+L+++C SA+ E
Sbjct: 871 DIVSTVMIVFSPQNGSKTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAE 928
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 412 bits (1060), Expect = e-112
Identities = 205/305 (67%), Positives = 246/305 (80%), Gaps = 19/305 (6%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ+ +CLGLQHSL+PLSF PHQLSC AWNN K+ GLTQKVD + + K+
Sbjct: 745 AGSKGNLLKLVQHSLCLGLQHSLVPLSFRFPHQLSCAAWNNQKSHGLTQKVDDTAESAKN 804
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVESSF++GLNPLE FVHSVT RDSSFSDNA+LPGTL RRLM+F+RDLY AYDGT
Sbjct: 805 YIPYAVVESSFMTGLNPLESFVHSVTSRDSSFSDNADLPGTLSRRLMFFMRDLYTAYDGT 864
Query: 514 VRNAYGNQLVQFAY-------------------SSDVPVCNVLGSEPVGSLSACAISEAA 392
VRN+YG+ +VQF Y SS +P +G +PVGSLSACAISEAA
Sbjct: 865 VRNSYGDLVVQFCYDIDKDASSPTSCAHGLISESSTIP--EGIGGQPVGSLSACAISEAA 922
Query: 391 YSALDQPISVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKD 212
YSALDQP+S+LETSPLLNLKRV+ECGSK+S+ADQTM+L+LS +LGR+RHG EY ALEVK+
Sbjct: 923 YSALDQPVSLLETSPLLNLKRVVECGSKRSNADQTMTLFLSNKLGRKRHGSEYAALEVKN 982
Query: 211 HLEGLIFSEVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRC 32
HLE L FS++V+TV I+FSPQ + +PWVCHFH+CKD ++RR+L V SIIDSLH+ C
Sbjct: 983 HLERLTFSDIVTTVSIIFSPQMYRENHFTPWVCHFHVCKDTMKRRQLKVQSIIDSLHMHC 1042
Query: 31 KSAQT 17
+A+T
Sbjct: 1043 TTAKT 1047
>ref|XP_008358315.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Malus
domestica]
Length = 1287
Score = 411 bits (1057), Expect = e-112
Identities = 205/299 (68%), Positives = 244/299 (81%), Gaps = 12/299 (4%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGN+ KLVQ+ MCLGLQ+SL+PLSF +P+QLSC AWNN KA QKV+ S + +S
Sbjct: 713 AGSKGNMQKLVQHSMCLGLQNSLVPLSFRIPNQLSCAAWNNQKAISSDQKVEGSSECVES 772
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVE+SFL+GLNPLECF+HSVT RDSSFS NA+LPGTL R+LM+F+RDL AYDGT
Sbjct: 773 YIPSAVVENSFLTGLNPLECFIHSVTSRDSSFSGNADLPGTLTRKLMFFMRDLCTAYDGT 832
Query: 514 VRNAYGNQLVQFAYSSDVP------------VCNVLGSEPVGSLSACAISEAAYSALDQP 371
VRNAYGN++VQF+Y P C+ +G +PVGSLSACAISEAAYSALDQP
Sbjct: 833 VRNAYGNKVVQFSYDISSPDSASTGDDESITACDGVGGQPVGSLSACAISEAAYSALDQP 892
Query: 370 ISVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEGLIF 191
+S+LETSPLLNLK +LECGSKKSSA QTMSLYLSE+LGR RHGFEY ALEVK++LEGL F
Sbjct: 893 VSLLETSPLLNLKNILECGSKKSSAKQTMSLYLSEKLGRHRHGFEYAALEVKNYLEGLKF 952
Query: 190 SEVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSAQTE 14
S++VSTV+I+FS Q GSK SPWV HFHI K+I+ RRRL +HSI++SL+ RC SA+ E
Sbjct: 953 SDIVSTVLIIFSSQNGSKKRFSPWVTHFHIGKEIVXRRRLKMHSIVNSLYARCNSARPE 1011
>ref|XP_009377912.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Pyrus x
bretschneideri] gi|694406181|ref|XP_009377913.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
[Pyrus x bretschneideri]
Length = 1466
Score = 410 bits (1054), Expect = e-112
Identities = 205/299 (68%), Positives = 244/299 (81%), Gaps = 12/299 (4%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGN+ KLVQ+ MCLGLQ+SL+PLSF +P+QLSC AWNN KA QKV+ S + +S
Sbjct: 734 AGSKGNMQKLVQHSMCLGLQNSLVPLSFRIPNQLSCAAWNNQKAISSDQKVEGSSECVES 793
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVE+SFL+GLNPLECF+HSVT RDSSFS NA+LPGTL R+LM+F+RDL AYDGT
Sbjct: 794 YIPSAVVENSFLTGLNPLECFIHSVTSRDSSFSGNADLPGTLTRKLMFFMRDLCTAYDGT 853
Query: 514 VRNAYGNQLVQFAYSSDVP------------VCNVLGSEPVGSLSACAISEAAYSALDQP 371
VRNAYGN++VQF+Y P C+ +G +PVGSLSACAISEAAYSALDQP
Sbjct: 854 VRNAYGNKVVQFSYDISSPDSASTRDDESITACDGVGGQPVGSLSACAISEAAYSALDQP 913
Query: 370 ISVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEGLIF 191
+S+LETSPLLNLK +LECGSKKSSA QTMSLYLSE+L R RHGFEY ALEVK++LEGL F
Sbjct: 914 VSLLETSPLLNLKNILECGSKKSSAKQTMSLYLSEKLVRHRHGFEYAALEVKNYLEGLKF 973
Query: 190 SEVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSAQTE 14
S++VSTV+I+FS Q GSK SPWV HFHI K+I+RRRRL +HSI++SL+ RC SA+ E
Sbjct: 974 SDIVSTVLIIFSSQNGSKKRFSPWVTHFHIGKEIVRRRRLKMHSIVNSLYARCNSARPE 1032
>gb|KDO63581.1| hypothetical protein CISIN_1g0005253mg, partial [Citrus sinensis]
Length = 825
Score = 404 bits (1038), Expect = e-110
Identities = 203/290 (70%), Positives = 241/290 (83%), Gaps = 3/290 (1%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ+ +CLGLQHSL PLSF PH+LSC AWN +A T+ KS
Sbjct: 532 AGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAWNRLRAGDNTE-------CAKS 584
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVE+SFL+GLNPLECF+HSVT RDSSFSDNA+LPGTL RRLM+F+RDL AYDGT
Sbjct: 585 YIPSAVVENSFLTGLNPLECFIHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLCTAYDGT 644
Query: 514 VRNAYGNQLVQFAYS---SDVPVCNVLGSEPVGSLSACAISEAAYSALDQPISVLETSPL 344
VRNAYGNQ+VQF+Y+ + P + G +PVGSLSACAISEAAYSALDQPIS+LETSPL
Sbjct: 645 VRNAYGNQIVQFSYNIEGTSTPTGEI-GDQPVGSLSACAISEAAYSALDQPISLLETSPL 703
Query: 343 LNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEGLIFSEVVSTVMI 164
LNLK VLECGSKKS+ADQTMSL+LS +LG++RHGFEYGALEVK+HLE L+ S++VST MI
Sbjct: 704 LNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYGALEVKNHLECLMLSDIVSTSMI 763
Query: 163 MFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSAQTE 14
++SPQTGS SPW+CHFH+ K+I++R L HSIIDSL+ +CK+A+TE
Sbjct: 764 IYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTE 813
>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
gi|557542783|gb|ESR53761.1| hypothetical protein
CICLE_v10018489mg [Citrus clementina]
Length = 1443
Score = 404 bits (1038), Expect = e-110
Identities = 203/290 (70%), Positives = 241/290 (83%), Gaps = 3/290 (1%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ+ +CLGLQHSL PLSF PH+LSC AWN +A T+ KS
Sbjct: 730 AGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAWNRLRAGDNTE-------CAKS 782
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVVE+SFL+GLNPLECF+HSVT RDSSFSDNA+LPGTL RRLM+F+RDL AYDGT
Sbjct: 783 YIPSAVVENSFLTGLNPLECFIHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLCTAYDGT 842
Query: 514 VRNAYGNQLVQFAYS---SDVPVCNVLGSEPVGSLSACAISEAAYSALDQPISVLETSPL 344
VRNAYGNQ+VQF+Y+ + P + G +PVGSLSACAISEAAYSALDQPIS+LETSPL
Sbjct: 843 VRNAYGNQIVQFSYNIEGTSTPTGEI-GDQPVGSLSACAISEAAYSALDQPISLLETSPL 901
Query: 343 LNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEGLIFSEVVSTVMI 164
LNLK VLECGSKKS+ADQTMSL+LS +LG++RHGFEYGALEVK+HLE L+ S++VST MI
Sbjct: 902 LNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYGALEVKNHLECLMLSDIVSTSMI 961
Query: 163 MFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSAQTE 14
++SPQTGS SPW+CHFH+ K+I++R L HSIIDSL+ +CK+A+TE
Sbjct: 962 IYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTE 1011
>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Citrus sinensis] gi|568847098|ref|XP_006477377.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X3 [Citrus sinensis]
gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1-like isoform X4 [Citrus
sinensis]
Length = 1443
Score = 399 bits (1024), Expect = e-108
Identities = 201/290 (69%), Positives = 239/290 (82%), Gaps = 3/290 (1%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ+ +CLGLQHSL PLSF PH+LSC AWN +A T+ KS
Sbjct: 730 AGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAWNRLRAGDNTE-------CAKS 782
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVV +SFL+GLNPLECF+HSVT RDSSFSDNA+LPGTL RRLM+F+RDL AYDGT
Sbjct: 783 YIPSAVVANSFLTGLNPLECFIHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLCTAYDGT 842
Query: 514 VRNAYGNQLVQFAYS---SDVPVCNVLGSEPVGSLSACAISEAAYSALDQPISVLETSPL 344
VRNAYGNQ+VQF+Y+ + P + G + VGSLSACAISEAAYSALDQPIS+LETSPL
Sbjct: 843 VRNAYGNQIVQFSYNIEGTSTPTGEI-GGQSVGSLSACAISEAAYSALDQPISLLETSPL 901
Query: 343 LNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEGLIFSEVVSTVMI 164
LNLK VLECGSKKS+ADQTMSL+LS +LG++RHGFEYGALEVK+HLE L+ S++VST MI
Sbjct: 902 LNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYGALEVKNHLECLMLSDIVSTSMI 961
Query: 163 MFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSAQTE 14
++SPQTGS SPW+CHFH+ K+I++R L HSIIDSL+ +CK+A+TE
Sbjct: 962 IYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTE 1011
>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Citrus sinensis]
Length = 1481
Score = 399 bits (1024), Expect = e-108
Identities = 201/290 (69%), Positives = 239/290 (82%), Gaps = 3/290 (1%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ+ +CLGLQHSL PLSF PH+LSC AWN +A T+ KS
Sbjct: 768 AGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAWNRLRAGDNTE-------CAKS 820
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
YIP AVV +SFL+GLNPLECF+HSVT RDSSFSDNA+LPGTL RRLM+F+RDL AYDGT
Sbjct: 821 YIPSAVVANSFLTGLNPLECFIHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLCTAYDGT 880
Query: 514 VRNAYGNQLVQFAYS---SDVPVCNVLGSEPVGSLSACAISEAAYSALDQPISVLETSPL 344
VRNAYGNQ+VQF+Y+ + P + G + VGSLSACAISEAAYSALDQPIS+LETSPL
Sbjct: 881 VRNAYGNQIVQFSYNIEGTSTPTGEI-GGQSVGSLSACAISEAAYSALDQPISLLETSPL 939
Query: 343 LNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHLEGLIFSEVVSTVMI 164
LNLK VLECGSKKS+ADQTMSL+LS +LG++RHGFEYGALEVK+HLE L+ S++VST MI
Sbjct: 940 LNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYGALEVKNHLECLMLSDIVSTSMI 999
Query: 163 MFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKSAQTE 14
++SPQTGS SPW+CHFH+ K+I++R L HSIIDSL+ +CK+A+TE
Sbjct: 1000 IYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTE 1049
>ref|XP_012488706.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Gossypium
raimondii]
Length = 1485
Score = 392 bits (1008), Expect = e-106
Identities = 194/302 (64%), Positives = 241/302 (79%), Gaps = 17/302 (5%)
Frame = -1
Query: 874 AGSKGNLLKLVQNCMCLGLQHSLIPLSFGLPHQLSCIAWNNHKACGLTQKVDASPKYCKS 695
AGSKGNLLKLVQ+ MCLGLQ S++PLSF P +LSC WN+ K+ GLTQ D S + K+
Sbjct: 751 AGSKGNLLKLVQHSMCLGLQRSVVPLSFRFPPKLSCSEWNDLKSQGLTQSGDDSVESAKN 810
Query: 694 YIPCAVVESSFLSGLNPLECFVHSVTCRDSSFSDNAELPGTLHRRLMYFLRDLYAAYDGT 515
+IP AV+ESSF++GLNPLECFVHSVT RDSSFSD+A+LPGTL RRLM+FLRDL A+YDGT
Sbjct: 811 FIPYAVIESSFMTGLNPLECFVHSVTSRDSSFSDHADLPGTLSRRLMFFLRDLCASYDGT 870
Query: 514 VRNAYGNQLVQFAYSSDVPVCNVL-----------------GSEPVGSLSACAISEAAYS 386
VRNAYG Q+VQF+Y SD G +PVGSLSACAISEAAYS
Sbjct: 871 VRNAYGGQVVQFSYGSDKGTSTATSFANEIQSQGSILPDGTGGQPVGSLSACAISEAAYS 930
Query: 385 ALDQPISVLETSPLLNLKRVLECGSKKSSADQTMSLYLSEELGRQRHGFEYGALEVKDHL 206
ALDQPIS+LETSPLLNLKRVLECGS++ ++DQTM+L+LS++LG+ RH FEY ALE+K++L
Sbjct: 931 ALDQPISLLETSPLLNLKRVLECGSRRRNSDQTMTLFLSDKLGKGRHCFEYAALEIKNYL 990
Query: 205 EGLIFSEVVSTVMIMFSPQTGSKTCLSPWVCHFHICKDILRRRRLNVHSIIDSLHLRCKS 26
E LIFS++VSTV+I +SPQ ++ C +PWVCHFH+CK+I++RRRL+VHSII SL + +
Sbjct: 991 EKLIFSDIVSTVLITYSPQKSTENCFNPWVCHFHVCKEIMKRRRLSVHSIIGSLQMHYAN 1050
Query: 25 AQ 20
A+
Sbjct: 1051 AK 1052