BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00021543
         (460 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI27568.1| RNA polymerase beta subunit [Rhamnus utilis]           281   1e-73
gb|ABV65718.1| RNA polymerase beta'' subunit, partial (chloropla...   276   4e-72
gb|AEI27565.1| RNA polymerase beta subunit [Hovenia trichocarpa ...   275   1e-71
gb|AEI27555.1| RNA polymerase beta subunit [Celtis tetrandra]         275   1e-71
gb|AEI27563.1| RNA polymerase beta subunit [Gouania mauritiana]       269   5e-70
gb|ABV65733.1| RNA polymerase beta'' subunit, partial (chloropla...   246   4e-63
gb|ABV65776.1| RNA polymerase beta'' subunit, partial (chloropla...   246   6e-63
ref|YP_009136469.1| RNA polymerase beta'' subunit (chloroplast) ...   244   2e-62
gb|ABV65777.1| RNA polymerase beta'' subunit (chloroplast) [Stap...   244   2e-62
gb|ABD93799.1| RNA polymerase beta chain, partial (chloroplast) ...   244   2e-62
gb|AKC99763.1| RNA polymerase beta'' subunit (chloroplast) [Prun...   244   2e-62
ref|YP_009136385.1| RNA polymerase beta'' subunit (chloroplast) ...   244   2e-62
ref|YP_009136301.1| RNA polymerase beta'' subunit (chloroplast) ...   244   2e-62
ref|YP_009020028.1| RNA polymerase beta' subunit (plastid) [Prun...   244   2e-62
gb|AEI27566.1| RNA polymerase beta subunit [Neillia thibetica]        244   2e-62
gb|AEI27558.1| RNA polymerase beta subunit [Dirachma socotrana]       243   5e-62
gb|AEI27553.1| RNA polymerase beta subunit [Barbeya oleoides]         243   5e-62
gb|AKF43117.1| RNA polymerase beta'' subunit (plastid) [Francoa ...   242   7e-62
ref|YP_007889851.1| RNA polymerase beta' subunit [Francoa sonchi...   242   7e-62
gb|ABV65747.1| RNA polymerase beta'' subunit, partial (chloropla...   242   9e-62

>gb|AEI27568.1| RNA polymerase beta subunit [Rhamnus utilis]
          Length = 1250

 Score =  281 bits (719), Expect = 1e-73
 Identities = 134/153 (87%), Positives = 136/153 (88%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQIS TKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH
Sbjct: 952  HNQISGTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 1011

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYCVETSTIISLGQFICENVCIAKKGPYLK                +KPYLATPGATVHG
Sbjct: 1012 NYCVETSTIISLGQFICENVCIAKKGPYLKSGQVIIVQIDSVVIRSAKPYLATPGATVHG 1071

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL+KGDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1072 HYGEILSKGDTLVTFIYEKSRSGDITQGLPKVE 1104


>gb|ABV65718.1| RNA polymerase beta'' subunit, partial (chloroplast) [Ceanothus
            prostratus]
          Length = 1281

 Score =  276 bits (706), Expect = 4e-72
 Identities = 132/153 (86%), Positives = 136/153 (88%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQISVTKYL+LDNLKHTFQVLKY LMDENGRIYNSAPCSNILLNPFNLNW+FLHHNYDH
Sbjct: 970  HNQISVTKYLQLDNLKHTFQVLKYFLMDENGRIYNSAPCSNILLNPFNLNWYFLHHNYDH 1029

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYCVETSTIISLGQFICENVCIAKKGPYLK                +KPYLATPGATVHG
Sbjct: 1030 NYCVETSTIISLGQFICENVCIAKKGPYLKSGQVIIVQIDSVVIRSAKPYLATPGATVHG 1089

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL+KGDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1090 HYGEILSKGDTLVTFIYEKSRSGDITQGLPKVE 1122


>gb|AEI27565.1| RNA polymerase beta subunit [Hovenia trichocarpa var. robusta]
          Length = 1254

 Score =  275 bits (702), Expect = 1e-71
 Identities = 130/153 (84%), Positives = 135/153 (88%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQISVTKYL+L +LKHTFQVLKYCLMDENGRIYNS+PCS ILLNPFNLNWHFLHHNYDH
Sbjct: 956  HNQISVTKYLQLGDLKHTFQVLKYCLMDENGRIYNSSPCSKILLNPFNLNWHFLHHNYDH 1015

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYCVETSTIISLGQFICENVCIAKKGPYLK                +KPYLATPGATVHG
Sbjct: 1016 NYCVETSTIISLGQFICENVCIAKKGPYLKSGQVIIVQIDSAVIRSAKPYLATPGATVHG 1075

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL+KGDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1076 HYGEILSKGDTLVTFIYEKSRSGDITQGLPKVE 1108


>gb|AEI27555.1| RNA polymerase beta subunit [Celtis tetrandra]
          Length = 1251

 Score =  275 bits (702), Expect = 1e-71
 Identities = 130/153 (84%), Positives = 135/153 (88%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQISVTKYL+L +LKHTFQVLKYCLMDENGRIYNS+PCS ILLNPFNLNWHFLHHNYDH
Sbjct: 953  HNQISVTKYLQLGDLKHTFQVLKYCLMDENGRIYNSSPCSKILLNPFNLNWHFLHHNYDH 1012

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYCVETSTIISLGQFICENVCIAKKGPYLK                +KPYLATPGATVHG
Sbjct: 1013 NYCVETSTIISLGQFICENVCIAKKGPYLKSGQVIIVQIDSAVIRSAKPYLATPGATVHG 1072

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL+KGDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1073 HYGEILSKGDTLVTFIYEKSRSGDITQGLPKVE 1105


>gb|AEI27563.1| RNA polymerase beta subunit [Gouania mauritiana]
          Length = 1246

 Score =  269 bits (688), Expect = 5e-70
 Identities = 129/153 (84%), Positives = 133/153 (86%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQISVTKYL+LDNLKHTFQVLKYCL+DE GR YNSAPCSNI LNPFNLNWHFLH NYDH
Sbjct: 948  HNQISVTKYLQLDNLKHTFQVLKYCLIDEIGRSYNSAPCSNIRLNPFNLNWHFLHPNYDH 1007

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYCVETSTIISLGQFICENVCIAKKGPYLK                +KPYLATPGATVHG
Sbjct: 1008 NYCVETSTIISLGQFICENVCIAKKGPYLKSGQVIIVQIDSVVIRSAKPYLATPGATVHG 1067

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL+KGDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1068 HYGEILSKGDTLVTFIYEKSRSGDITQGLPKVE 1100


>gb|ABV65733.1| RNA polymerase beta'' subunit, partial (chloroplast) [Eucryphia
            lucida]
          Length = 1280

 Score =  246 bits (629), Expect = 4e-63
 Identities = 118/153 (77%), Positives = 126/153 (82%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQISVTKYL+LDNLK TFQVLKY LMDEN RIYN  PC+NI+LNPFNLNW+FL+HNY H
Sbjct: 969  HNQISVTKYLQLDNLKQTFQVLKYYLMDENERIYNPDPCNNIVLNPFNLNWYFLYHNYHH 1028

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYC ETSTIISLGQF CENVCIAK GP+LK                +KPYL TPGATVHG
Sbjct: 1029 NYCEETSTIISLGQFFCENVCIAKNGPHLKSGQVIILQVDSVVIRSAKPYLVTPGATVHG 1088

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL +GDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1089 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVE 1121


>gb|ABV65776.1| RNA polymerase beta'' subunit, partial (chloroplast) [Stachyurus
            praecox]
          Length = 1280

 Score =  246 bits (627), Expect = 6e-63
 Identities = 119/153 (77%), Positives = 125/153 (81%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQISV KYL+LDNLK TF+VLKY LMDENGRIYN  PCSNI+LNPFNLNW+FLH NY H
Sbjct: 969  HNQISVAKYLQLDNLKETFRVLKYYLMDENGRIYNPDPCSNIVLNPFNLNWYFLHDNYHH 1028

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYC ETS IISLGQFICENVCIAK GP+LK                +KPYLATPGATVHG
Sbjct: 1029 NYCEETSKIISLGQFICENVCIAKNGPHLKSGQVLIVQVDSVVIRSAKPYLATPGATVHG 1088

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL KGDTLVTFIY KSRSGDITQGLPKVE
Sbjct: 1089 HYGEILYKGDTLVTFIYVKSRSGDITQGLPKVE 1121


>ref|YP_009136469.1| RNA polymerase beta'' subunit (chloroplast) [Prunus padus]
            gi|808178349|gb|AKC99679.1| RNA polymerase beta'' subunit
            (chloroplast) [Prunus padus]
          Length = 1368

 Score =  244 bits (623), Expect = 2e-62
 Identities = 119/153 (77%), Positives = 129/153 (84%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQIS+TKYL+LDNLK TFQV KY LMDENGRIYNS   +NILLNPFNLNWHFLHH+Y+H
Sbjct: 998  HNQISLTKYLQLDNLKQTFQVFKYYLMDENGRIYNSD--TNILLNPFNLNWHFLHHDYNH 1055

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYC ETSTIISLGQFICEN+CIAKKG +LK                +KPYLATPGATVHG
Sbjct: 1056 NYCEETSTIISLGQFICENLCIAKKGSHLKSGQVIIVQIDSVVIRSAKPYLATPGATVHG 1115

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL++GDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1116 HYGEILSEGDTLVTFIYEKSRSGDITQGLPKVE 1148


>gb|ABV65777.1| RNA polymerase beta'' subunit (chloroplast) [Staphylea colchica]
          Length = 1390

 Score =  244 bits (623), Expect = 2e-62
 Identities = 119/153 (77%), Positives = 125/153 (81%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQISVTKYL+LDNLK TF+VLKY LMDEN RIYN  PCSNI+LNPFNLNW+FLH NY H
Sbjct: 1000 HNQISVTKYLQLDNLKQTFRVLKYYLMDENERIYNPDPCSNIVLNPFNLNWYFLHDNYHH 1059

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYC ETS IISLGQFICENVCIAK GP+LK                +KPYLATPGATVHG
Sbjct: 1060 NYCDETSKIISLGQFICENVCIAKNGPHLKSGQVLIVQVDSLVIRSAKPYLATPGATVHG 1119

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL KGDTLVTFIY KSRSGDITQGLPKVE
Sbjct: 1120 HYGEILYKGDTLVTFIYVKSRSGDITQGLPKVE 1152


>gb|ABD93799.1| RNA polymerase beta chain, partial (chloroplast) [Staphylea trifolia]
          Length = 866

 Score =  244 bits (623), Expect = 2e-62
 Identities = 119/153 (77%), Positives = 125/153 (81%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQISVTKYL+LDNLK TF+VLKY LMDEN RIYN  PCSNI+LNPFNLNW+FLH NY H
Sbjct: 551  HNQISVTKYLQLDNLKQTFRVLKYYLMDENERIYNPDPCSNIVLNPFNLNWYFLHDNYHH 610

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYC ETS IISLGQFICENVCIAK GP+LK                +KPYLATPGATVHG
Sbjct: 611  NYCDETSKIISLGQFICENVCIAKNGPHLKSGQVLIVQVDSLVIRSAKPYLATPGATVHG 670

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL KGDTLVTFIY KSRSGDITQGLPKVE
Sbjct: 671  HYGEILYKGDTLVTFIYVKSRSGDITQGLPKVE 703


>gb|AKC99763.1| RNA polymerase beta'' subunit (chloroplast) [Prunus serrulata var.
            spontanea]
          Length = 1368

 Score =  244 bits (622), Expect = 2e-62
 Identities = 119/153 (77%), Positives = 130/153 (84%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQIS+TKYL+L+NLK TFQVLKY LMDENGRIYNS   +NILLNPFNLNWHFLHH+Y+H
Sbjct: 998  HNQISLTKYLQLNNLKQTFQVLKYYLMDENGRIYNSD--TNILLNPFNLNWHFLHHDYNH 1055

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYC ETSTIISLGQFICEN+CIAKKG +LK                +KPYLATPGATVHG
Sbjct: 1056 NYCEETSTIISLGQFICENLCIAKKGSHLKSGQVIIVQIDSVVIRSAKPYLATPGATVHG 1115

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL++GDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1116 HYGEILSEGDTLVTFIYEKSRSGDITQGLPKVE 1148


>ref|YP_009136385.1| RNA polymerase beta'' subunit (chloroplast) [Prunus maximowiczii]
            gi|808178264|gb|AKC99595.1| RNA polymerase beta'' subunit
            (chloroplast) [Prunus maximowiczii]
          Length = 1368

 Score =  244 bits (622), Expect = 2e-62
 Identities = 119/153 (77%), Positives = 130/153 (84%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQIS+TKYL+L+NLK TFQVLKY LMDENGRIYNS   +NILLNPFNLNWHFLHH+Y+H
Sbjct: 998  HNQISLTKYLQLNNLKQTFQVLKYYLMDENGRIYNSD--TNILLNPFNLNWHFLHHDYNH 1055

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYC ETSTIISLGQFICEN+CIAKKG +LK                +KPYLATPGATVHG
Sbjct: 1056 NYCEETSTIISLGQFICENLCIAKKGSHLKSGQVIIVQIDSVVIRSAKPYLATPGATVHG 1115

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL++GDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1116 HYGEILSEGDTLVTFIYEKSRSGDITQGLPKVE 1148


>ref|YP_009136301.1| RNA polymerase beta'' subunit (chloroplast) [Prunus yedoensis]
            gi|808178179|gb|AKC99511.1| RNA polymerase beta'' subunit
            (chloroplast) [Prunus yedoensis]
            gi|808178519|gb|AKC99847.1| RNA polymerase beta'' subunit
            (chloroplast) [Prunus subhirtella var. subhirtella]
            gi|808178604|gb|AKC99931.1| RNA polymerase beta'' subunit
            (chloroplast) [Prunus subhirtella var. subhirtella]
          Length = 1368

 Score =  244 bits (622), Expect = 2e-62
 Identities = 119/153 (77%), Positives = 130/153 (84%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQIS+TKYL+L+NLK TFQVLKY LMDENGRIYNS   +NILLNPFNLNWHFLHH+Y+H
Sbjct: 998  HNQISLTKYLQLNNLKQTFQVLKYYLMDENGRIYNSD--TNILLNPFNLNWHFLHHDYNH 1055

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYC ETSTIISLGQFICEN+CIAKKG +LK                +KPYLATPGATVHG
Sbjct: 1056 NYCEETSTIISLGQFICENLCIAKKGSHLKSGQVIIVQIDSVVIRSAKPYLATPGATVHG 1115

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL++GDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1116 HYGEILSEGDTLVTFIYEKSRSGDITQGLPKVE 1148


>ref|YP_009020028.1| RNA polymerase beta' subunit (plastid) [Prunus mume]
            gi|589061043|gb|AHK26864.1| RNA polymerase beta' subunit
            (plastid) [Prunus mume]
          Length = 1368

 Score =  244 bits (622), Expect = 2e-62
 Identities = 119/153 (77%), Positives = 130/153 (84%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HNQIS+TKYL+L+NLK TFQVLKY LMDENGRIYNS   +NILLNPFNLNWHFLHH+Y+H
Sbjct: 998  HNQISLTKYLQLNNLKQTFQVLKYYLMDENGRIYNSD--TNILLNPFNLNWHFLHHDYNH 1055

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYC ETSTIISLGQFICEN+CIAKKG +LK                +KPYLATPGATVHG
Sbjct: 1056 NYCEETSTIISLGQFICENLCIAKKGSHLKSGQVIIVQIDSVVIRSAKPYLATPGATVHG 1115

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL++GDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1116 HYGEILSEGDTLVTFIYEKSRSGDITQGLPKVE 1148


>gb|AEI27566.1| RNA polymerase beta subunit [Neillia thibetica]
          Length = 1258

 Score =  244 bits (622), Expect = 2e-62
 Identities = 119/153 (77%), Positives = 129/153 (84%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HN IS+TKYL+LDNLK TFQVLKY LMDE+GRIYNS   +NILLNPFNLNWHFLHHNY+H
Sbjct: 962  HNHISLTKYLQLDNLKQTFQVLKYYLMDEDGRIYNSD--TNILLNPFNLNWHFLHHNYNH 1019

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NYC ETSTIISLGQFICEN+CIAKKG +LK                +KPYLATPGATVHG
Sbjct: 1020 NYCEETSTIISLGQFICENLCIAKKGSHLKSGQVIIVQIDSVVIRSAKPYLATPGATVHG 1079

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL++GDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1080 HYGEILSEGDTLVTFIYEKSRSGDITQGLPKVE 1112


>gb|AEI27558.1| RNA polymerase beta subunit [Dirachma socotrana]
          Length = 1252

 Score =  243 bits (619), Expect = 5e-62
 Identities = 118/153 (77%), Positives = 125/153 (81%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            +NQISVTKYL+LDNLK TFQV+KY LMDE GRIYNS  CSN LLNPFNLNW+F HHNYDH
Sbjct: 954  YNQISVTKYLQLDNLKQTFQVIKYYLMDETGRIYNSDTCSNTLLNPFNLNWNFFHHNYDH 1013

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            NY  E STIISLGQFICENVCIAK GP+LK                +K YLATPGATVHG
Sbjct: 1014 NYFQERSTIISLGQFICENVCIAKNGPHLKSGQVIIVQMDSVVIRSAKSYLATPGATVHG 1073

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL+KGDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1074 HYGEILSKGDTLVTFIYEKSRSGDITQGLPKVE 1106


>gb|AEI27553.1| RNA polymerase beta subunit [Barbeya oleoides]
          Length = 1265

 Score =  243 bits (619), Expect = 5e-62
 Identities = 119/155 (76%), Positives = 126/155 (81%), Gaps = 2/155 (1%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            HN ISVTKYL+LDN K TFQVLKY LMDENGRIYNS PC+N  LNP NLNW+FLHHNYDH
Sbjct: 955  HNPISVTKYLQLDNFKQTFQVLKYYLMDENGRIYNSDPCNNFFLNPLNLNWYFLHHNYDH 1014

Query: 280  N--YCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATV 107
            N  YC ETSTIISLGQFICENV I KKGP+LK                +KPYLATPGATV
Sbjct: 1015 NYHYCEETSTIISLGQFICENVWIDKKGPHLKSGQVIIVQIDSVVIRSAKPYLATPGATV 1074

Query: 106  HGHYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HGHYGEIL+KG+TLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1075 HGHYGEILSKGNTLVTFIYEKSRSGDITQGLPKVE 1109


>gb|AKF43117.1| RNA polymerase beta'' subunit (plastid) [Francoa sonchifolia]
          Length = 1397

 Score =  242 bits (618), Expect = 7e-62
 Identities = 116/153 (75%), Positives = 127/153 (83%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            +NQIS+TKY ELDNLK TFQVL+Y L+DENGRIYN  PCSNI+LNPFNLNW+FLH+NY H
Sbjct: 1007 NNQISITKYFELDNLKQTFQVLQYYLIDENGRIYNPDPCSNIVLNPFNLNWYFLHYNYHH 1066

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            N C ETSTI+SLGQFICENVCIAK GP+LK                +KPYLATPGATVHG
Sbjct: 1067 NDCEETSTIMSLGQFICENVCIAKNGPHLKSGQVLIVQVDSVVIRSAKPYLATPGATVHG 1126

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL +GDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1127 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVE 1159


>ref|YP_007889851.1| RNA polymerase beta' subunit [Francoa sonchifolia]
            gi|386268355|gb|AFJ00461.1| RNA polymerase beta' subunit
            [Francoa sonchifolia]
          Length = 1401

 Score =  242 bits (618), Expect = 7e-62
 Identities = 116/153 (75%), Positives = 127/153 (83%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLKHTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNYDH 281
            +NQIS+TKY ELDNLK TFQVL+Y L+DENGRIYN  PCSNI+LNPFNLNW+FLH+NY H
Sbjct: 1011 NNQISITKYFELDNLKQTFQVLQYYLIDENGRIYNPDPCSNIVLNPFNLNWYFLHYNYHH 1070

Query: 280  NYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATVHG 101
            N C ETSTI+SLGQFICENVCIAK GP+LK                +KPYLATPGATVHG
Sbjct: 1071 NDCEETSTIMSLGQFICENVCIAKNGPHLKSGQVLIVQVDSVVIRSAKPYLATPGATVHG 1130

Query: 100  HYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HYGEIL +GDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1131 HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVE 1163


>gb|ABV65747.1| RNA polymerase beta'' subunit, partial (chloroplast) [Ixerba
            brexioides]
          Length = 1283

 Score =  242 bits (617), Expect = 9e-62
 Identities = 119/155 (76%), Positives = 125/155 (80%), Gaps = 2/155 (1%)
 Frame = -1

Query: 460  HNQISVTKYLELDNLK--HTFQVLKYCLMDENGRIYNSAPCSNILLNPFNLNWHFLHHNY 287
            HNQISVTKY   DNLK   TFQ LKY LMDENGRIYN  PCSNI+LNPFNLNW+FLHHNY
Sbjct: 973  HNQISVTKYFRFDNLKLKQTFQGLKYYLMDENGRIYNLYPCSNIVLNPFNLNWYFLHHNY 1032

Query: 286  DHNYCVETSTIISLGQFICENVCIAKKGPYLKXXXXXXXXXXXXXXXXSKPYLATPGATV 107
            +HNYC ETSTIISLGQFICENVCIAK GP+LK                +KPYLATPGATV
Sbjct: 1033 NHNYCEETSTIISLGQFICENVCIAKNGPHLKSGQVLIVQIDSVVIRSAKPYLATPGATV 1092

Query: 106  HGHYGEILTKGDTLVTFIYEKSRSGDITQGLPKVE 2
            HGHY EIL +GDTLVTFIYEKSRSGDITQGLPKVE
Sbjct: 1093 HGHYREILYEGDTLVTFIYEKSRSGDITQGLPKVE 1127