BLASTX nr result
ID: Ziziphus21_contig00020214
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00020214
(276 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007011878.1| DEAD/DEAH box RNA helicase family protein is... 93 7e-17
ref|XP_010097240.1| DEAD-box ATP-dependent RNA helicase 56 [Moru... 87 1e-16
emb|CDX70383.1| BnaC03g04670D [Brassica napus] 89 1e-15
emb|CDX69778.1| BnaA10g21270D [Brassica napus] 89 2e-15
emb|CDX69777.1| BnaA10g21260D [Brassica napus] 89 2e-15
emb|CDY72314.1| BnaCnng77040D [Brassica napus] 89 2e-15
emb|CDX78412.1| BnaA03g03240D [Brassica napus] 88 2e-15
emb|CDP13503.1| unnamed protein product [Coffea canephora] 88 3e-15
emb|CDX85726.1| BnaA02g00870D [Brassica napus] 87 4e-15
emb|CDY51112.1| BnaCnng20150D [Brassica napus] 87 4e-15
ref|XP_013615299.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 87 5e-15
ref|XP_013615297.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 87 5e-15
ref|XP_010101269.1| DEAD-box ATP-dependent RNA helicase 56 [Moru... 87 6e-15
emb|CDX85725.1| BnaA02g00880D [Brassica napus] 85 6e-15
ref|XP_010555514.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 86 1e-14
emb|CDY72315.1| BnaCnng77050D [Brassica napus] 86 1e-14
gb|KOM41983.1| hypothetical protein LR48_Vigan04g218100 [Vigna a... 85 2e-14
ref|XP_004303319.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 85 2e-14
gb|KOM27754.1| hypothetical protein LR48_Vigan462s000700 [Vigna ... 84 5e-14
ref|XP_011081570.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 84 5e-14
>ref|XP_007011878.1| DEAD/DEAH box RNA helicase family protein isoform 1 [Theobroma
cacao] gi|508782241|gb|EOY29497.1| DEAD/DEAH box RNA
helicase family protein isoform 1 [Theobroma cacao]
Length = 485
Score = 93.2 bits (230), Expect = 7e-17
Identities = 53/94 (56%), Positives = 59/94 (62%), Gaps = 15/94 (15%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNILSLS*FQRIDWVVKTFQ 95
NGES KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG L+L F +V+ +
Sbjct: 33 NGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKFLTLLPF--FIFVIYHYH 90
Query: 94 YTDRRGY---------------VLLTNGSFDPVF 38
D Y +LLT GS D +F
Sbjct: 91 TIDLEQYYGLVKVSIKRITEVNILLTTGSLDAIF 124
>ref|XP_010097240.1| DEAD-box ATP-dependent RNA helicase 56 [Morus notabilis]
gi|587878300|gb|EXB67307.1| DEAD-box ATP-dependent RNA
helicase 56 [Morus notabilis]
Length = 525
Score = 87.0 bits (214), Expect(2) = 1e-16
Identities = 39/45 (86%), Positives = 44/45 (97%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNILS 140
+G+S KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGN+++
Sbjct: 36 SGDSAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNVIN 80
Score = 25.8 bits (55), Expect(2) = 1e-16
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
Frame = -1
Query: 90 LIGEVMFYLPMVPSI--RFFF----GSSSVQHECIP 1
+I V FY+ +V ++ +F G +VQHECIP
Sbjct: 78 VINTVSFYVSLVLNLCNHYFHIHDSGKKTVQHECIP 113
>emb|CDX70383.1| BnaC03g04670D [Brassica napus]
Length = 447
Score = 89.0 bits (219), Expect(2) = 1e-15
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNILSLS*F 128
NG++VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG IL S F
Sbjct: 32 NGDAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKILYASFF 80
Score = 20.8 bits (42), Expect(2) = 1e-15
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 21 VQHECIP 1
VQHECIP
Sbjct: 92 VQHECIP 98
>emb|CDX69778.1| BnaA10g21270D [Brassica napus]
Length = 495
Score = 88.6 bits (218), Expect = 2e-15
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNILSL 137
NG++VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG +SL
Sbjct: 32 NGDAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKFISL 77
>emb|CDX69777.1| BnaA10g21260D [Brassica napus]
Length = 523
Score = 88.6 bits (218), Expect = 2e-15
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNILSL 137
NG++VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG +SL
Sbjct: 32 NGDAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKFISL 77
>emb|CDY72314.1| BnaCnng77040D [Brassica napus]
Length = 95
Score = 88.6 bits (218), Expect = 2e-15
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNILSL 137
NG++VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG +SL
Sbjct: 32 NGDAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKFISL 77
>emb|CDX78412.1| BnaA03g03240D [Brassica napus]
Length = 497
Score = 87.8 bits (216), Expect(2) = 2e-15
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNILSL 137
NG++VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG LS+
Sbjct: 32 NGDAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKYLSV 77
Score = 21.2 bits (43), Expect(2) = 2e-15
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 45 RFFFGSSSVQHECIP 1
RFF VQHECIP
Sbjct: 87 RFF-----VQHECIP 96
>emb|CDP13503.1| unnamed protein product [Coffea canephora]
Length = 114
Score = 87.8 bits (216), Expect = 3e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNI 146
NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG +
Sbjct: 33 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKL 75
>emb|CDX85726.1| BnaA02g00870D [Brassica napus]
Length = 490
Score = 87.4 bits (215), Expect = 4e-15
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNILSL 137
NG++VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG SL
Sbjct: 32 NGDAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKCFSL 77
>emb|CDY51112.1| BnaCnng20150D [Brassica napus]
Length = 440
Score = 87.4 bits (215), Expect = 4e-15
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNILSL 137
NG++VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG SL
Sbjct: 32 NGDAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKCFSL 77
>ref|XP_013615299.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Brassica
oleracea var. oleracea]
Length = 88
Score = 87.0 bits (214), Expect = 5e-15
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGN 149
NG++VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGN
Sbjct: 32 NGDAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGN 73
>ref|XP_013615297.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Brassica
oleracea var. oleracea]
Length = 85
Score = 87.0 bits (214), Expect = 5e-15
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGN 149
NG++VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGN
Sbjct: 32 NGDAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGN 73
>ref|XP_010101269.1| DEAD-box ATP-dependent RNA helicase 56 [Morus notabilis]
gi|587899824|gb|EXB88204.1| DEAD-box ATP-dependent RNA
helicase 56 [Morus notabilis]
Length = 518
Score = 86.7 bits (213), Expect = 6e-15
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNI 146
NGE+ KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGN+
Sbjct: 33 NGEAPKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNL 75
>emb|CDX85725.1| BnaA02g00880D [Brassica napus]
Length = 442
Score = 84.7 bits (208), Expect(2) = 6e-15
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG 152
NG++VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG
Sbjct: 32 NGDAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG 72
Score = 22.3 bits (46), Expect(2) = 6e-15
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 33 GSSSVQHECIP 1
G VQHECIP
Sbjct: 72 GKYGVQHECIP 82
>ref|XP_010555514.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Tarenaya
hassleriana]
Length = 93
Score = 85.9 bits (211), Expect = 1e-14
Identities = 44/53 (83%), Positives = 45/53 (84%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNILSLS*FQRID 116
NGE+ KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG L FQ ID
Sbjct: 33 NGENGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKNL----FQNID 81
>emb|CDY72315.1| BnaCnng77050D [Brassica napus]
Length = 98
Score = 85.5 bits (210), Expect = 1e-14
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNIL 143
NG++VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG +
Sbjct: 32 NGDAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKFI 75
>gb|KOM41983.1| hypothetical protein LR48_Vigan04g218100 [Vigna angularis]
Length = 477
Score = 85.1 bits (209), Expect = 2e-14
Identities = 39/43 (90%), Positives = 41/43 (95%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGNI 146
NGE+ KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEG +
Sbjct: 32 NGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKL 74
>ref|XP_004303319.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Fragaria
vesca subsp. vesca]
Length = 428
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 155
NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 33 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 72
>gb|KOM27754.1| hypothetical protein LR48_Vigan462s000700 [Vigna angularis]
Length = 430
Score = 83.6 bits (205), Expect = 5e-14
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 155
NGE+VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 31 NGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 70
>ref|XP_011081570.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X1
[Sesamum indicum]
Length = 428
Score = 83.6 bits (205), Expect = 5e-14
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -3
Query: 274 NGESVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 155
NGE+VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 33 NGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 72