BLASTX nr result

ID: Ziziphus21_contig00019724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00019724
         (347 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009373597.1| PREDICTED: pentatricopeptide repeat-containi...    63   1e-07
ref|XP_010107240.1| hypothetical protein L484_021763 [Morus nota...    62   1e-07
ref|XP_008222795.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
ref|XP_007222864.1| hypothetical protein PRUPE_ppa004279mg [Prun...    62   2e-07
ref|XP_008337481.1| PREDICTED: pentatricopeptide repeat-containi...    60   5e-07

>ref|XP_009373597.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic [Pyrus x bretschneideri]
          Length = 505

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
 Frame = -3

Query: 294 MDSVLGLNHCHVKVGLPWRFNPSNKAFLCPQ------NPILQSPKPS---YSNPKQFSLS 142
           M+SV+ L+  H  +   W+ N S  +FL P+      +P  ++P PS   YS+P  F   
Sbjct: 1   MESVVPLHRIHCLIPPTWKLNHSTNSFLFPRTLTTKPSPKPRTPFPSSLCYSHP--FPQP 58

Query: 141 IFSVPQHSSATHTTLLVETFHQHRXXXXXXXXXXXKDSCPLQVLSED 1
             + P+  S  HT LLVETFH+H+           +D CPLQ+L++D
Sbjct: 59  NVAAPRGGSTKHTILLVETFHEHQRLKDVLVKVTTEDCCPLQLLADD 105


>ref|XP_010107240.1| hypothetical protein L484_021763 [Morus notabilis]
           gi|587927040|gb|EXC14264.1| hypothetical protein
           L484_021763 [Morus notabilis]
          Length = 664

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
 Frame = -3

Query: 294 MDSVLGLNH-CHVKVGLPWRFNPSNKAFLCPQNPILQSPKPSYSNPKQFSLSIFSVPQHS 118
           M+S+  LNH  H K  L   F P    FL P    + + KP   +  + S+      Q+S
Sbjct: 1   MESIRTLNHHSHTKTALRKSFTPVINGFLFPLTLTIPN-KPKLFSSLRLSVGSSLSGQNS 59

Query: 117 SATHTTLLVETFHQHRXXXXXXXXXXXKDSCPLQVLSED 1
           S  HTTLLVETFH+HR            DSCP+++L ED
Sbjct: 60  STEHTTLLVETFHEHRKFKTLLKRLSKNDSCPMRLLRED 98


>ref|XP_008222795.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic [Prunus mume]
          Length = 518

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
 Frame = -3

Query: 294 MDSVLGLNHCHVKVGLPWRFNPSNKAFL-----------CPQNPILQSPKPSYSNPKQFS 148
           M+SV+ L H H K+ L W+ N    +F            C   P   S + +   P    
Sbjct: 1   MESVVNLQHSHCKIALTWKINHGTSSFFFFPKTLTTKPSCKAGPFASSLRSAQRLPSPLR 60

Query: 147 LSIFSVPQHSSATHTTLLVETFHQHRXXXXXXXXXXXKDSCPLQVLSED 1
             +   P  SS  HTTLLVETFH+H+             SCPLQ+L ED
Sbjct: 61  PDV--APDSSSTKHTTLLVETFHEHQ-RLKALLQKLINGSCPLQLLGED 106


>ref|XP_007222864.1| hypothetical protein PRUPE_ppa004279mg [Prunus persica]
           gi|462419800|gb|EMJ24063.1| hypothetical protein
           PRUPE_ppa004279mg [Prunus persica]
          Length = 518

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
 Frame = -3

Query: 294 MDSVLGLNHCHVKVGLPWRFNPSNKAFL-----------CPQNPILQSPKPSYSNPKQFS 148
           M+SV+ L H H K+ L W+ N    +F            C   P   S + +   P    
Sbjct: 1   MESVVNLQHSHCKIALTWKINHGTSSFFFFPKTLTTKPSCKAGPFTSSLRSAQRLPSPLR 60

Query: 147 LSIFSVPQHSSATHTTLLVETFHQHRXXXXXXXXXXXKDSCPLQVLSED 1
             +   P  SS  HTTLLVETFH+H+             SCPLQ+L ED
Sbjct: 61  PDV--APDSSSTKHTTLLVETFHEHQ-RLKALLQNLINGSCPLQLLGED 106


>ref|XP_008337481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic [Malus domestica]
          Length = 522

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
 Frame = -3

Query: 294 MDSVLGLNHCHVKVGLPWRFNPSNKAFLCPQN-PILQSPKPS--------YSNPKQFSLS 142
           M+SV+ L+  H  +   W+ N S  +FL P+     +SPKP         YS+P  F   
Sbjct: 1   MESVVPLHRFHCLIPPTWKLNHSTNSFLFPRTLTTKRSPKPRTPFPSSLCYSDP--FPPP 58

Query: 141 IFSVPQHSSATHTTLLVETFHQHRXXXXXXXXXXXKDSCPLQVLSED 1
             + P+  S  HTTLLVETFH+H+           +D  PLQ+L++D
Sbjct: 59  DVAAPRGGSTKHTTLLVETFHEHQRLKDLLVKVTTEDCLPLQLLADD 105


Top