BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00018751
         (418 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008965484.1| RNA polymerase beta [Pyrus spinosa] gi|56566...   129   1e-27
ref|YP_004842230.1| RNA polymerase beta' subunit [Pyrus pyrifoli...   129   1e-27
gb|AHE41648.1| RNA polymerase beta' subunit protein, partial (ch...   128   1e-27
gb|AKZ23878.1| RNA polymerase beta subunit (plastid) [Androsace ...   127   3e-27
ref|YP_009136386.1| RNA polymerase beta' subunit (chloroplast) [...   127   3e-27
ref|YP_009136302.1| RNA polymerase beta' subunit (chloroplast) [...   127   3e-27
gb|AII17898.1| RNA polymerase beta subunit, partial (chloroplast...   127   3e-27
gb|AII17896.1| RNA polymerase beta subunit, partial (chloroplast...   127   3e-27
gb|AII17895.1| RNA polymerase beta subunit, partial (chloroplast...   127   3e-27
gb|AII17892.1| RNA polymerase beta subunit, partial (chloroplast...   127   3e-27
gb|AII17885.1| RNA polymerase beta subunit, partial (chloroplast...   127   3e-27
gb|AII17883.1| RNA polymerase beta subunit, partial (chloroplast...   127   3e-27
gb|AII17881.1| RNA polymerase beta subunit, partial (chloroplast...   127   3e-27
gb|AII17880.1| RNA polymerase beta subunit, partial (chloroplast...   127   3e-27
gb|AII17879.1| RNA polymerase beta subunit, partial (chloroplast...   127   3e-27
gb|AII17878.1| RNA polymerase beta subunit, partial (chloroplast...   127   3e-27
gb|AII17877.1| RNA polymerase beta subunit, partial (chloroplast...   127   3e-27
ref|YP_009020029.1| RNA polymerase beta (plastid) [Prunus mume] ...   127   3e-27
ref|YP_009019879.1| RNA polymerase beta (chloroplast) [Azadirach...   127   3e-27
ref|YP_008082724.1| RNA polymerase beta [Prinsepia utilis] gi|50...   127   3e-27

>ref|YP_008965484.1| RNA polymerase beta [Pyrus spinosa] gi|565666456|emb|CDI73556.1|
           RNA polymerase beta [Pyrus spinosa]
          Length = 687

 Score =  129 bits (323), Expect = 1e-27
 Identities = 64/78 (82%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRRRDFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 214 DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRRDFLVRRMELAKHFIRTNIEPEWMVL 273

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 274 CLLPVLPPELRPIIQIDG 291


>ref|YP_004842230.1| RNA polymerase beta' subunit [Pyrus pyrifolia]
           gi|345433552|dbj|BAK69374.1| RNA polymerase beta'
           subunit [Pyrus pyrifolia]
          Length = 681

 Score =  129 bits (323), Expect = 1e-27
 Identities = 64/78 (82%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRRRDFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 208 DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRRDFLVRRMELAKHFIRTNIEPEWMVL 267

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 268 CLLPVLPPELRPIIQIDG 285


>gb|AHE41648.1| RNA polymerase beta' subunit protein, partial (chloroplast)
           [Philadelphus coronarius]
          Length = 639

 Score =  128 bits (322), Expect = 1e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+K+GRRRDFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 189 DLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRRDFLVRRMELAKSFIRTNIEPEWMVL 248

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 249 CLLPVLPPELRPIIQIDG 266


>gb|AKZ23878.1| RNA polymerase beta subunit (plastid) [Androsace occidentalis]
          Length = 685

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 210 DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 269

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 270 CLLPVLPPELRPIIQIDG 287


>ref|YP_009136386.1| RNA polymerase beta' subunit (chloroplast) [Prunus maximowiczii]
           gi|808178265|gb|AKC99596.1| RNA polymerase beta' subunit
           (chloroplast) [Prunus maximowiczii]
           gi|808178435|gb|AKC99764.1| RNA polymerase beta' subunit
           (chloroplast) [Prunus serrulata var. spontanea]
          Length = 683

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 208 DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 267

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 268 CLLPVLPPELRPIIQIDG 285


>ref|YP_009136302.1| RNA polymerase beta' subunit (chloroplast) [Prunus yedoensis]
           gi|817527798|ref|YP_009136470.1| RNA polymerase beta'
           subunit (chloroplast) [Prunus padus]
           gi|808178180|gb|AKC99512.1| RNA polymerase beta' subunit
           (chloroplast) [Prunus yedoensis]
           gi|808178350|gb|AKC99680.1| RNA polymerase beta' subunit
           (chloroplast) [Prunus padus] gi|808178520|gb|AKC99848.1|
           RNA polymerase beta' subunit (chloroplast) [Prunus
           subhirtella var. subhirtella]
           gi|808178605|gb|AKC99932.1| RNA polymerase beta' subunit
           (chloroplast) [Prunus subhirtella var. subhirtella]
          Length = 683

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 208 DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 267

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 268 CLLPVLPPELRPIIQIDG 285


>gb|AII17898.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
           vernicosum]
          Length = 532

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 60  DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 119

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 120 CLLPVLPPELRPIIQIDG 137


>gb|AII17896.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum tinus]
          Length = 540

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 66  DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 125

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 126 CLLPVLPPELRPIIQIDG 143


>gb|AII17895.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
           taiwanianum]
          Length = 540

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 66  DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 125

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 126 CLLPVLPPELRPIIQIDG 143


>gb|AII17892.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
           plicatum]
          Length = 540

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 66  DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 125

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 126 CLLPVLPPELRPIIQIDG 143


>gb|AII17885.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
           erubescens] gi|669215633|gb|AII17886.1| RNA polymerase
           beta subunit, partial (chloroplast) [Viburnum
           grandiflorum] gi|669215639|gb|AII17889.1| RNA polymerase
           beta subunit, partial (chloroplast) [Viburnum lutescens]
           gi|669215649|gb|AII17894.1| RNA polymerase beta subunit,
           partial (chloroplast) [Viburnum sieboldii]
          Length = 540

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 66  DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 125

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 126 CLLPVLPPELRPIIQIDG 143


>gb|AII17883.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
           dentatum] gi|669215641|gb|AII17890.1| RNA polymerase
           beta subunit, partial (chloroplast) [Viburnum molle]
           gi|669215655|gb|AII17897.1| RNA polymerase beta subunit,
           partial (chloroplast) [Viburnum triphyllum]
          Length = 540

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 66  DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 125

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 126 CLLPVLPPELRPIIQIDG 143


>gb|AII17881.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
           clemensae]
          Length = 540

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 66  DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 125

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 126 CLLPVLPPELRPIIQIDG 143


>gb|AII17880.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
           cassinoides] gi|669215637|gb|AII17888.1| RNA polymerase
           beta subunit, partial (chloroplast) [Viburnum lentago]
           gi|669215647|gb|AII17893.1| RNA polymerase beta subunit,
           partial (chloroplast) [Viburnum punctatum]
          Length = 540

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 66  DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 125

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 126 CLLPVLPPELRPIIQIDG 143


>gb|AII17879.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
           carlesii]
          Length = 540

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 66  DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 125

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 126 CLLPVLPPELRPIIQIDG 143


>gb|AII17878.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
           amplificatum]
          Length = 540

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 66  DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 125

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 126 CLLPVLPPELRPIIQIDG 143


>gb|AII17877.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
           acerifolium] gi|669215625|gb|AII17882.1| RNA polymerase
           beta subunit, partial (chloroplast) [Viburnum
           cylindricum] gi|669215629|gb|AII17884.1| RNA polymerase
           beta subunit, partial (chloroplast) [Viburnum dilatatum]
           gi|669215635|gb|AII17887.1| RNA polymerase beta subunit,
           partial (chloroplast) [Viburnum lantanoides]
           gi|669215643|gb|AII17891.1| RNA polymerase beta subunit,
           partial (chloroplast) [Viburnum opulus]
          Length = 540

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 66  DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 125

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 126 CLLPVLPPELRPIIQIDG 143


>ref|YP_009020029.1| RNA polymerase beta (plastid) [Prunus mume]
           gi|589061044|gb|AHK26865.1| RNA polymerase beta
           (plastid) [Prunus mume]
          Length = 683

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 208 DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 267

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 268 CLLPVLPPELRPIIQIDG 285


>ref|YP_009019879.1| RNA polymerase beta (chloroplast) [Azadirachta indica]
           gi|586947526|gb|AHJ91309.1| RNA polymerase beta
           (chloroplast) [Azadirachta indica]
          Length = 677

 Score =  127 bits (320), Expect = 3e-27
 Identities = 62/78 (79%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+K+GRRRDFLVRRMELAK+F+RTNIEPEWMV 
Sbjct: 204 DLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRRDFLVRRMELAKHFLRTNIEPEWMVL 263

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 264 CLLPVLPPELRPIIQIDG 281


>ref|YP_008082724.1| RNA polymerase beta [Prinsepia utilis] gi|501418814|gb|AGL94691.1|
           RNA polymerase beta [Prinsepia utilis]
          Length = 683

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/78 (80%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 DLRIIIDYSLVEWKELGEEGPTGNEWEDQKVGRRRDFLVRRMELAKNFIRTNIEPEWMVX 57
           DLRIIIDYSLVEWKELGEEGPTGNEWED+KVGRR+DFLVRRMELAK+FIRTNIEPEWMV 
Sbjct: 208 DLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVL 267

Query: 56  XXXXXXXXXXXPIIQIDG 3
                      PIIQIDG
Sbjct: 268 CLLPVLPPELRPIIQIDG 285