BLASTX nr result
ID: Ziziphus21_contig00017208
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00017208
(1393 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 492 e-136
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 489 e-135
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 487 e-134
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 479 e-132
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 478 e-132
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 478 e-132
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 471 e-130
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 470 e-129
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 470 e-129
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 461 e-127
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 461 e-127
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 460 e-126
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 459 e-126
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 456 e-125
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 456 e-125
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 451 e-124
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 449 e-123
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 442 e-121
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 440 e-120
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 434 e-119
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 492 bits (1266), Expect = e-136
Identities = 252/483 (52%), Positives = 326/483 (67%), Gaps = 19/483 (3%)
Frame = -2
Query: 1392 LIYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNN--- 1222
++YS TL L++V +L++KE K + EGL+VRG ++ NN
Sbjct: 162 ILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQA-----EGLVVRGSQQEKNTNNKSR 216
Query: 1221 ---NGGSRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNE--------KSKEHAEASV 1075
+ R RSKSR R C YCK+ GH ++C KLQ+K+ K +E +A+V
Sbjct: 217 DKSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAV 276
Query: 1074 AHEEIEDGDV---YSVTEDSSGK*GWILDSACSFHICFHRDWFSSYVPVDKGVVLMGDDH 904
+E D ++ Y+ +S + WILD+AC++H+C +RDWF++Y V G VLMGDD
Sbjct: 277 VTDEKSDAELLVAYAGCAQTSDQ--WILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDT 334
Query: 903 PCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKG 724
PC V GIGTV++KM DG IRTLS+VRH+P++ ++LISL LD+ G ++GG G+L+V KG
Sbjct: 335 PCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 394
Query: 723 ALVVMKASLVGT-LYRLQXXXXXXXXXXXXXXXXXXV-TRLWHMRLGHMSEKGLAMLSKR 550
+LVVMKAS+ LY LQ T LWHMRLGHMSE GLA LSKR
Sbjct: 395 SLVVMKASIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKR 454
Query: 549 SLLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYM 370
LL +SISKL+FCEHC+FGK KRV F+T H T+G LDY+HSDLWGPAR S GG RYM
Sbjct: 455 GLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYM 514
Query: 369 FTFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEF 190
T +DD+SRKVW YFLKHK F +FK+WK +VE+QTER+VK LRTDNG+EFC +F +
Sbjct: 515 MTIVDDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 574
Query: 189 CRNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNR 10
C++EGIVRH TV TPQQNGVAER+NR ++ K +CMLSN+GL + FWAEA +TACYL+NR
Sbjct: 575 CKSEGIVRHYTVPHTPQQNGVAERMNRIIISKARCMLSNAGLPKQFWAEAVSTACYLINR 634
Query: 9 SPS 1
SPS
Sbjct: 635 SPS 637
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 489 bits (1259), Expect = e-135
Identities = 249/482 (51%), Positives = 325/482 (67%), Gaps = 18/482 (3%)
Frame = -2
Query: 1392 LIYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNN--- 1222
++YS TL L++V +L++KE K + E L+VRGR ++ +N
Sbjct: 104 ILYSRDTLTLQEVYDALHAKEKMKKMVPSEGSNSQP-----ESLVVRGRQQEKNTDNKSR 158
Query: 1221 ---NGGSRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNEKS--------KEHAEASV 1075
+ G R RSKSR R C YCK+ GH ++C KLQNK K +E +A+V
Sbjct: 159 DKSSSGYRGRSKSRGRYKSCKYCKRGGHDISDCWKLQNKEKHKGNYKPKGKQEEQGKAAV 218
Query: 1074 AHEEIEDGDV---YSVTEDSSGK*GWILDSACSFHICFHRDWFSSYVPVDKGVVLMGDDH 904
A + D ++ Y+ +S + W+LD+ C++H+C +RDWF++Y PV G VLMGD+
Sbjct: 219 ATDNKPDAELLVAYAGCVQTSDE--WLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNT 276
Query: 903 PCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKG 724
PC V G+GT+++KM DG IRTLS+VRH+P + +NLISLS LD+ G ++GG G+L+V KG
Sbjct: 277 PCKVAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKG 336
Query: 723 ALVVMKASLVGT-LYRLQXXXXXXXXXXXXXXXXXXVTRLWHMRLGHMSEKGLAMLSKRS 547
+LVVMKA + LY LQ + LWHMRLGHMSE GLA LSKR
Sbjct: 337 SLVVMKADIKNADLYHLQGTTIVGNVAAVTDSLSN--SDLWHMRLGHMSEIGLAELSKRG 394
Query: 546 LLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYMF 367
LL ++I KL+FCEHC+FGK KRV F+T H T+G LDY+HSDLWGPAR S GG RYM
Sbjct: 395 LLDGQNIGKLKFCEHCIFGKHKRVKFTTSTHTTEGILDYVHSDLWGPARKRSFGGARYMM 454
Query: 366 TFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEFC 187
T +DD+SRKVW YFLKHK + F +FK+WK +VE+QTER+VK LRTDNG+EFC F +C
Sbjct: 455 TIVDDYSRKVWPYFLKHKFEAFLVFKEWKTMVERQTERKVKVLRTDNGMEFCSRQFKSYC 514
Query: 186 RNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNRS 7
R+EGIVRH TV TPQQNGV ER+NRT++ K +CMLSN+GL + FWAEAA+TACYL+NRS
Sbjct: 515 RSEGIVRHYTVSHTPQQNGVVERMNRTIISKARCMLSNAGLPRRFWAEAASTACYLINRS 574
Query: 6 PS 1
PS
Sbjct: 575 PS 576
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 487 bits (1253), Expect = e-134
Identities = 249/483 (51%), Positives = 322/483 (66%), Gaps = 19/483 (3%)
Frame = -2
Query: 1392 LIYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNNNGG 1213
++YS TL L++V +L++KE K + EGL+VRGR ++ NN
Sbjct: 71 ILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQA-----EGLVVRGRQQEKNTNNKSR 125
Query: 1212 S------RPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNE--------KSKEHAEASV 1075
R RSKSR R C YCK+ GH +EC KLQ+K+ K +E +A+V
Sbjct: 126 DKSSSIYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAV 185
Query: 1074 AHEEIEDGDV---YSVTEDSSGK*GWILDSACSFHICFHRDWFSSYVPVDKGVVLMGDDH 904
+E D ++ Y+ +S + WILD+AC++H+C +RDWF++Y V G VLMGDD
Sbjct: 186 VTDEKSDAELLVAYAGCAQTSDQ--WILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDT 243
Query: 903 PCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKG 724
PC V GIGTV++KM DG IRTL +VRH+P++ ++LISL LD+ G ++GG G+L+V KG
Sbjct: 244 PCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 303
Query: 723 ALVVMKASL-VGTLYRLQXXXXXXXXXXXXXXXXXXV-TRLWHMRLGHMSEKGLAMLSKR 550
+LVVMKA + LY L+ T LWHMRLGHMSE GLA LSKR
Sbjct: 304 SLVVMKADIKYANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKR 363
Query: 549 SLLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYM 370
LL +SI KL+FCEHC+FGK KRV F+T H T+G LDY+HSDLWGPAR S GG RYM
Sbjct: 364 GLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYM 423
Query: 369 FTFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEF 190
T +DD+SRKVW YFLKHK F +FK+WK +VE+QTER+VK LRTDNG+E C +F +
Sbjct: 424 MTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSY 483
Query: 189 CRNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNR 10
C++EGIVRH TV TPQQNGVAER+NRT++ K +CMLSN+ L + FWAEA +TACYL+NR
Sbjct: 484 CKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINR 543
Query: 9 SPS 1
SPS
Sbjct: 544 SPS 546
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 479 bits (1234), Expect = e-132
Identities = 245/482 (50%), Positives = 322/482 (66%), Gaps = 19/482 (3%)
Frame = -2
Query: 1392 LIYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNN--- 1222
++YS TL L++V +L++KE K + EGL+V+G ++ NN
Sbjct: 147 ILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQA-----EGLVVQGSQQEKNTNNKSR 201
Query: 1221 ---NGGSRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNE--------KSKEHAEASV 1075
+ R RSKSR R C YCK+ GH ++C KLQ+K+ K ++ +A+V
Sbjct: 202 DKSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAV 261
Query: 1074 AHEEIEDGDV---YSVTEDSSGK*GWILDSACSFHICFHRDWFSSYVPVDKGVVLMGDDH 904
+E D ++ Y+ +S + WILD+AC++H+C +RDWF++Y V G VLMGDD
Sbjct: 262 VTDEKSDAELLVAYAGCAQTSDQ--WILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDT 319
Query: 903 PCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKG 724
PC V GIGTV++KM DG IRTLS+VRH+P++ ++LISL LD G ++GG G+L+V KG
Sbjct: 320 PCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKG 379
Query: 723 ALVVMKASLVGT-LYRLQXXXXXXXXXXXXXXXXXXV-TRLWHMRLGHMSEKGLAMLSKR 550
+LVVMKA + LY LQ T LWHMRLGHMSE GLA LS R
Sbjct: 380 SLVVMKADIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMR 439
Query: 549 SLLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYM 370
LL +SI KL+FCEHC+FGK KRV F+T H T+G LDY+HSDLWGPAR S GG RYM
Sbjct: 440 GLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYM 499
Query: 369 FTFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEF 190
T ++D+SRKVW YFLKHK F +FK+WK +VE+QTER+VK LRTDNG+EFC +F +
Sbjct: 500 MTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 559
Query: 189 CRNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNR 10
C++EGI+RH TV TPQQNGVAER+NRT++ K +CMLSN+GL + FWAEA +TACYL+NR
Sbjct: 560 CKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINR 619
Query: 9 SP 4
SP
Sbjct: 620 SP 621
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 478 bits (1231), Expect = e-132
Identities = 247/483 (51%), Positives = 320/483 (66%), Gaps = 19/483 (3%)
Frame = -2
Query: 1392 LIYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNN--- 1222
++YS TL L++V +L+ KE K + EGLIV GR ++ N
Sbjct: 369 ILYSRDTLTLKEVYDALHVKEKMKKMVPSEGSNSQA-----EGLIVWGRQQEKNTKNQSR 423
Query: 1221 ---NGGSRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNE--------KSKEHAEASV 1075
+ R RSKSR R C YCK+ GH EC KL +K+ K +E +A+V
Sbjct: 424 DKSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAV 483
Query: 1074 AHEEIEDGDV---YSVTEDSSGK*GWILDSACSFHICFHRDWFSSYVPVDKGVVLMGDDH 904
+E D ++ Y+ +S + WIL++AC +H+C +RDWF++Y V G VLMGDD
Sbjct: 484 VTDEKSDAELLVAYAGCAQTSDQ--WILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDT 541
Query: 903 PCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKG 724
PC V GIGTV++KM DG IRTLS+VRH+P++ ++LISL LD+ G ++GG G+L+V KG
Sbjct: 542 PCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 601
Query: 723 ALVVMKASLVGT-LYRLQXXXXXXXXXXXXXXXXXXV-TRLWHMRLGHMSEKGLAMLSKR 550
+LVVMKA + LY L+ T LWHMRLGHM+E GLA LSKR
Sbjct: 602 SLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKR 661
Query: 549 SLLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYM 370
LL +SI KL+FCEHC+FGK KRV F+T H T+G LDY+HSDLWGPAR S GG RYM
Sbjct: 662 GLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYM 721
Query: 369 FTFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEF 190
T +DD+SRKVW YFLKHK F +FK+WK +VE+QTER+VK LRTDNG+EFC +F +
Sbjct: 722 MTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 781
Query: 189 CRNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNR 10
C++EGIVRH TV TPQQNGVAER+NRT++ K +C+LSN+GL + FWAEA +TACYL+NR
Sbjct: 782 CKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINR 841
Query: 9 SPS 1
SPS
Sbjct: 842 SPS 844
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 478 bits (1231), Expect = e-132
Identities = 247/483 (51%), Positives = 320/483 (66%), Gaps = 19/483 (3%)
Frame = -2
Query: 1392 LIYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNN--- 1222
++YS TL L++V +L+ KE K + EGLIV GR ++ N
Sbjct: 162 ILYSRDTLTLKEVYDALHVKEKMKKMVPSEGSNSQA-----EGLIVWGRQQEKNTKNQSR 216
Query: 1221 ---NGGSRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNE--------KSKEHAEASV 1075
+ R RSKSR R C YCK+ GH EC KL +K+ K +E +A+V
Sbjct: 217 DKSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAV 276
Query: 1074 AHEEIEDGDV---YSVTEDSSGK*GWILDSACSFHICFHRDWFSSYVPVDKGVVLMGDDH 904
+E D ++ Y+ +S + WIL++AC +H+C +RDWF++Y V G VLMGDD
Sbjct: 277 VTDEKSDAELLVAYAGCAQTSDQ--WILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDT 334
Query: 903 PCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKG 724
PC V GIGTV++KM DG IRTLS+VRH+P++ ++LISL LD+ G ++GG G+L+V KG
Sbjct: 335 PCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 394
Query: 723 ALVVMKASLVGT-LYRLQXXXXXXXXXXXXXXXXXXV-TRLWHMRLGHMSEKGLAMLSKR 550
+LVVMKA + LY L+ T LWHMRLGHM+E GLA LSKR
Sbjct: 395 SLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKR 454
Query: 549 SLLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYM 370
LL +SI KL+FCEHC+FGK KRV F+T H T+G LDY+HSDLWGPAR S GG RYM
Sbjct: 455 GLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYM 514
Query: 369 FTFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEF 190
T +DD+SRKVW YFLKHK F +FK+WK +VE+QTER+VK LRTDNG+EFC +F +
Sbjct: 515 MTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 574
Query: 189 CRNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNR 10
C++EGIVRH TV TPQQNGVAER+NRT++ K +C+LSN+GL + FWAEA +TACYL+NR
Sbjct: 575 CKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINR 634
Query: 9 SPS 1
SPS
Sbjct: 635 SPS 637
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 471 bits (1212), Expect = e-130
Identities = 235/441 (53%), Positives = 304/441 (68%), Gaps = 19/441 (4%)
Frame = -2
Query: 1269 EGLIVRGRTSSRDQNN------NGGSRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNN 1108
EGL+V+G ++ NN + R RSKSR R C YCK+ GH ++C KLQ+K+
Sbjct: 15 EGLVVQGSQQEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDK 74
Query: 1107 E--------KSKEHAEASVAHEEIEDGDV---YSVTEDSSGK*GWILDSACSFHICFHRD 961
K ++ +A+V +E D ++ Y+ +S + WILD+AC++H+C +RD
Sbjct: 75 RTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQTSDQ--WILDTACTYHMCPNRD 132
Query: 960 WFSSYVPVDKGVVLMGDDHPCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSAL 781
WF++Y V G VLMGDD PC V GIGTV++KM DG IRTLS+VRH+P++ ++LISL L
Sbjct: 133 WFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTL 192
Query: 780 DKSGCSFAGGGGVLRVLKGALVVMKASLVGT-LYRLQXXXXXXXXXXXXXXXXXXV-TRL 607
D G ++GG G+L+V KG+LVVMKA + LY LQ T L
Sbjct: 193 DCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDSLSNSDATNL 252
Query: 606 WHMRLGHMSEKGLAMLSKRSLLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYI 427
WHMRLGHMSE GLA LS R LL +SI KL+FCEHC+FGK KRV F+T H T+G LDY+
Sbjct: 253 WHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYV 312
Query: 426 HSDLWGPARTASKGGGRYMFTFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRV 247
HSDLWGPAR S GG RYM T ++D+SRKVW YFLKHK F +FK+WK +VE+QTER+V
Sbjct: 313 HSDLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKV 372
Query: 246 KRLRTDNGLEFCDGVFNEFCRNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSG 67
K LRTDNG+EFC +F +C++EGI+RH TV TPQQNGVAER+NRT++ K +CMLSN+G
Sbjct: 373 KILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAG 432
Query: 66 LAQDFWAEAAATACYLVNRSP 4
L + FWAEA +TACYL+NRSP
Sbjct: 433 LPKQFWAEAVSTACYLINRSP 453
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 470 bits (1209), Expect = e-129
Identities = 242/483 (50%), Positives = 318/483 (65%), Gaps = 19/483 (3%)
Frame = -2
Query: 1392 LIYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNN--- 1222
++YS TL L++V +L++KE K + EGL+VRGR ++ N
Sbjct: 197 ILYSHDTLILKEVYDALHAKEKMKKMVPSEGSNSQA-----EGLVVRGRQQEKNTKNQSR 251
Query: 1221 ---NGGSRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNE--------KSKEHAEASV 1075
+ R RSKSR R C YCK+ GH +EC KLQ+K+ K +E +A+V
Sbjct: 252 DKSSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAV 311
Query: 1074 AHEEIEDGDV---YSVTEDSSGK*GWILDSACSFHICFHRDWFSSYVPVDKGVVLMGDDH 904
+E D ++ Y+ +S + WILD+A ++H+C +RDWF++Y + G VLMGDD
Sbjct: 312 VTDEKSDTELLVAYAGCAQTSDQ--WILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDT 369
Query: 903 PCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKG 724
PC V GIGTV++KM DG IRTLS+VRH+P++ ++LISL LD+ G ++GG G+L+V KG
Sbjct: 370 PCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 429
Query: 723 ALVVMKASLVGT-LYRLQXXXXXXXXXXXXXXXXXXV-TRLWHMRLGHMSEKGLAMLSKR 550
+LVVMKA + LY L+ T LWHMRLGHMSE GLA LSKR
Sbjct: 430 SLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKR 489
Query: 549 SLLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYM 370
LL +SI KL+FCEHC+FGK KRV F+T H T+G LDY+HSDLWGPA S GG RYM
Sbjct: 490 ELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYM 549
Query: 369 FTFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEF 190
T +DD+SRKVW YFLKHK F +FK+WK +VE+QTE++VK LRTDNG+EFC +F +
Sbjct: 550 MTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSY 609
Query: 189 CRNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNR 10
C++EGIV H TV TPQQNGVAER+N ++ K +CMLSN+ L + FWAEA +T CYL+NR
Sbjct: 610 CKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINR 669
Query: 9 SPS 1
SPS
Sbjct: 670 SPS 672
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 470 bits (1209), Expect = e-129
Identities = 242/483 (50%), Positives = 318/483 (65%), Gaps = 19/483 (3%)
Frame = -2
Query: 1392 LIYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNN--- 1222
++YS TL L++V +L++KE K + EGL+VRGR ++ N
Sbjct: 197 ILYSHDTLILKEVYDALHAKEKMKKMVPSEGSNSQA-----EGLVVRGRQQEKNTKNQSR 251
Query: 1221 ---NGGSRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNE--------KSKEHAEASV 1075
+ R RSKSR R C YCK+ GH +EC KLQ+K+ K +E +A+V
Sbjct: 252 DKSSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAV 311
Query: 1074 AHEEIEDGDV---YSVTEDSSGK*GWILDSACSFHICFHRDWFSSYVPVDKGVVLMGDDH 904
+E D ++ Y+ +S + WILD+A ++H+C +RDWF++Y + G VLMGDD
Sbjct: 312 VTDEKSDTELLVAYAGCAQTSDQ--WILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDT 369
Query: 903 PCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKG 724
PC V GIGTV++KM DG IRTLS+VRH+P++ ++LISL LD+ G ++GG G+L+V KG
Sbjct: 370 PCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 429
Query: 723 ALVVMKASLVGT-LYRLQXXXXXXXXXXXXXXXXXXV-TRLWHMRLGHMSEKGLAMLSKR 550
+LVVMKA + LY L+ T LWHMRLGHMSE GLA LSKR
Sbjct: 430 SLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKR 489
Query: 549 SLLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYM 370
LL +SI KL+FCEHC+FGK KRV F+T H T+G LDY+HSDLWGPA S GG RYM
Sbjct: 490 ELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYM 549
Query: 369 FTFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEF 190
T +DD+SRKVW YFLKHK F +FK+WK +VE+QTE++VK LRTDNG+EFC +F +
Sbjct: 550 MTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSY 609
Query: 189 CRNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNR 10
C++EGIV H TV TPQQNGVAER+N ++ K +CMLSN+ L + FWAEA +T CYL+NR
Sbjct: 610 CKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINR 669
Query: 9 SPS 1
SPS
Sbjct: 670 SPS 672
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 461 bits (1187), Expect = e-127
Identities = 236/432 (54%), Positives = 293/432 (67%), Gaps = 9/432 (2%)
Frame = -2
Query: 1269 EGLIVRGRTSSRDQNNNGG-----SRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNE 1105
E L VRGR+ R N++ SR RSKSR + C YCKKK H EC KLQNK
Sbjct: 200 EALQVRGRSEQRTYNDSSDRDKSQSRGRSKSRGKKF-CKYCKKKNHFIEECWKLQNKEKR 258
Query: 1104 KSKEHAEASVAHEEIEDGDVYSVTEDS-SGK*GWILDSACSFHICFHRDWFSSYVPVDKG 928
KS A + E + GD V + WILD+ACSFHIC +RDWFSSY V G
Sbjct: 259 KSDGKASVVTSAENSDSGDCLVVFAGCVASHDEWILDTACSFHICINRDWFSSYKSVQNG 318
Query: 927 -VVLMGDDHPCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGG 751
VV MGDD+P ++GIG+V++K HDG+ RTL +VRH+P M++NLISLS LD G ++
Sbjct: 319 DVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKYSSS 378
Query: 750 GGVLRVLKGALVVMKASL-VGTLYRLQXXXXXXXXXXXXXXXXXXV-TRLWHMRLGHMSE 577
GGV++V KG+LV M + LY L+ + T LWHMRLGHMSE
Sbjct: 379 GGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVSKDEPIKTNLWHMRLGHMSE 438
Query: 576 KGLAMLSKRSLLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPART 397
G+A L KR+LL + K++FCEHCVFGK KRV F+T +H+TKG LDY+H+DLWGP+R
Sbjct: 439 LGMAELMKRNLLDGCTQGKMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHTDLWGPSRK 498
Query: 396 ASKGGGRYMFTFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLE 217
A GG RYM T IDD+SRKVW YFLKHK+D FA FK+WK +E+QTE+ VK LRTDNG E
Sbjct: 499 AYLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVRIERQTEKEVKVLRTDNGGE 558
Query: 216 FCDGVFNEFCRNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAA 37
FC F+++CR EGIVRH T+ TPQQNGVAER+NRT++ K +CMLSN+ + + FWAEAA
Sbjct: 559 FCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAA 618
Query: 36 ATACYLVNRSPS 1
TACYL+NRSPS
Sbjct: 619 NTACYLINRSPS 630
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 461 bits (1185), Expect = e-127
Identities = 244/474 (51%), Positives = 311/474 (65%), Gaps = 10/474 (2%)
Frame = -2
Query: 1392 LIYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNN-NG 1216
++ S L L++V +L +KE ++ GE L VRGRT +R N N
Sbjct: 160 ILLSRDELTLKEVYDALQNKE----KMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNY 215
Query: 1215 GSRPRSKSR--FRNLICHYCKKKGHIKTECRKLQNKN--NEKSKEHAEASVAHEEIEDGD 1048
R RSKS+ C YCK K H EC+K+Q K N+K + + AS A + + GD
Sbjct: 216 DRRGRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGD 275
Query: 1047 VYSVTEDS-SGK*GWILDSACSFHICFHRDWFSSYVPVDKG-VVLMGDDHPCCVIGIGTV 874
V +G WILDSACSFHIC R+WFSSY PV KG VV MGDD+PC ++GIG+V
Sbjct: 276 CLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSV 335
Query: 873 RVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKGALVVMKASLV 694
++K DG+ RTL VR++P MS+NLISLS LD G ++G GVL+V KG+LV +K L
Sbjct: 336 QIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLN 395
Query: 693 GT-LYRLQXXXXXXXXXXXXXXXXXXV--TRLWHMRLGHMSEKGLAMLSKRSLLGDRSIS 523
LY L+ T LWHMRLGHMS G+ L KR+LL + S
Sbjct: 396 SAKLYVLRGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSS 455
Query: 522 KLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYMFTFIDDFSR 343
K++FCEHC+FGK KRV F+T +H TKGTLDY+H+DLWGP++ S GG RYM T IDD+SR
Sbjct: 456 KIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSR 515
Query: 342 KVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEFCRNEGIVRH 163
KVW YFLKHK+D F FK WK ++E+QTER+VK LRTDNG EFC FN++CR EGIVRH
Sbjct: 516 KVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRH 575
Query: 162 LTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNRSPS 1
T+ TPQQNGVAER+NRT++ + +CMLS++ + + FWAEAA+TACYL+NRSPS
Sbjct: 576 HTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPS 629
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 460 bits (1184), Expect = e-126
Identities = 244/474 (51%), Positives = 311/474 (65%), Gaps = 10/474 (2%)
Frame = -2
Query: 1392 LIYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNN-NG 1216
++ S L L++V +L +KE ++ GE L VRGRT +R N N
Sbjct: 160 ILLSRDELTLKEVYDALQNKE----KMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNY 215
Query: 1215 GSRPRSKSR--FRNLICHYCKKKGHIKTECRKLQNKN--NEKSKEHAEASVAHEEIEDGD 1048
R RSKS+ C YCK K H EC+K+Q K N+K + + AS A + + GD
Sbjct: 216 DRRGRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGD 275
Query: 1047 VYSVTEDS-SGK*GWILDSACSFHICFHRDWFSSYVPVDKG-VVLMGDDHPCCVIGIGTV 874
V +G WILDSACSFHIC R+WFSSY PV KG VV MGDD+PC ++GIG+V
Sbjct: 276 CLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSV 335
Query: 873 RVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKGALVVMKASLV 694
++K DG+ RTL VR++P MS+NLISLS LD G ++G GVL+V KG+LV +K L
Sbjct: 336 QIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLN 395
Query: 693 GT-LYRLQXXXXXXXXXXXXXXXXXXV--TRLWHMRLGHMSEKGLAMLSKRSLLGDRSIS 523
LY L+ T LWHMRLGHMS G+ L KR+LL + S
Sbjct: 396 SAKLYVLRGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSS 455
Query: 522 KLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYMFTFIDDFSR 343
K++FCEHC+FGK KRV F+T +H TKGTLDY+H+DLWGP++ S GG RYM T IDD+SR
Sbjct: 456 KIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTVIDDYSR 515
Query: 342 KVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEFCRNEGIVRH 163
KVW YFLKHK+D F FK WK ++E+QTER+VK LRTDNG EFC FN++CR EGIVRH
Sbjct: 516 KVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRH 575
Query: 162 LTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNRSPS 1
T+ TPQQNGVAER+NRT++ + +CMLS++ + + FWAEAA+TACYL+NRSPS
Sbjct: 576 HTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPS 629
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 459 bits (1182), Expect = e-126
Identities = 243/474 (51%), Positives = 311/474 (65%), Gaps = 10/474 (2%)
Frame = -2
Query: 1392 LIYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNN-NG 1216
++ S L L++V +L +KE ++ GE L VRGRT +R N N
Sbjct: 160 ILLSRDELTLKEVYDALQNKE----KMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNY 215
Query: 1215 GSRPRSKSR--FRNLICHYCKKKGHIKTECRKLQNKN--NEKSKEHAEASVAHEEIEDGD 1048
R RSKS+ C YCK K H EC+K+Q K N+K + + AS A + + GD
Sbjct: 216 DRRGRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGD 275
Query: 1047 VYSVTEDS-SGK*GWILDSACSFHICFHRDWFSSYVPVDKG-VVLMGDDHPCCVIGIGTV 874
V +G WILDSACSFHIC R+WFSSY PV KG VV MGDD+PC ++GIG+V
Sbjct: 276 CLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSV 335
Query: 873 RVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKGALVVMKASLV 694
++K DG+ RTL VR++P MS+NLISLS LD G ++G GVL+V KG+LV +K +
Sbjct: 336 QIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDVN 395
Query: 693 GT-LYRLQXXXXXXXXXXXXXXXXXXV--TRLWHMRLGHMSEKGLAMLSKRSLLGDRSIS 523
LY L+ T LWHMRLGHMS G+ L KR+LL + S
Sbjct: 396 SAKLYVLRGCTLTGSDSAAAAITNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSS 455
Query: 522 KLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYMFTFIDDFSR 343
K++FCEHC+FGK KRV F+T +H TKGTLDY+H+DLWGP++ S GG RYM T IDD+SR
Sbjct: 456 KIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSR 515
Query: 342 KVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEFCRNEGIVRH 163
KVW YFLKHK+D F FK WK ++E+QTER+VK LRTDNG EFC FN++CR EGIVRH
Sbjct: 516 KVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRH 575
Query: 162 LTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNRSPS 1
T+ TPQQNGVAER+NRT++ + +CMLS++ + + FWAEAA+TACYL+NRSPS
Sbjct: 576 HTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPS 629
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 456 bits (1174), Expect = e-125
Identities = 243/475 (51%), Positives = 310/475 (65%), Gaps = 11/475 (2%)
Frame = -2
Query: 1392 LIYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNN-NG 1216
++ S L L++V +L +KE ++ GE L VRGRT ++ N N
Sbjct: 162 ILLSRDELTLKEVYDALQNKE----KMKIMVQNDGSSSSKGEALHVRGRTENKTSNEKNY 217
Query: 1215 GSRPRSKSR--FRNLICHYCKKKGHIKTECRKLQNKNNEKSKEHAEASVAHEEIED---G 1051
R RSKS+ C YCK K H EC+K+Q K K+K+ + SVA + D G
Sbjct: 218 DRRGRSKSKPPGNKKFCVYCKLKNHNIDECKKVQAKER-KNKKDGKVSVASAAVSDDDSG 276
Query: 1050 DVYSVTEDS-SGK*GWILDSACSFHICFHRDWFSSYVPVDKG-VVLMGDDHPCCVIGIGT 877
D V +G WILDSACSFHIC R+WFSSY PV KG VV MGDD+PC ++GIG+
Sbjct: 277 DCLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGS 336
Query: 876 VRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKGALVVMKASL 697
V++K DG+ RTL VR++P MS+NLISLS LD G ++G GVL+V KG+LV +K L
Sbjct: 337 VQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDL 396
Query: 696 VGT-LYRLQXXXXXXXXXXXXXXXXXXV--TRLWHMRLGHMSEKGLAMLSKRSLLGDRSI 526
LY L+ T LWHMRLGHMS G+ L KR+LL +
Sbjct: 397 NSAKLYVLRGCTLPGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGYTS 456
Query: 525 SKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYMFTFIDDFS 346
SK++FCEHC+FGK KRV F+T +H TKGTLDY+H+DLWGP++ S GG RYM T IDD+S
Sbjct: 457 SKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYS 516
Query: 345 RKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEFCRNEGIVR 166
RKVW YFLKHK+D F FK WK ++E+QTER+VK L TDNG EFC FN++CR EGIVR
Sbjct: 517 RKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLCTDNGGEFCSHAFNDYCRQEGIVR 576
Query: 165 HLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNRSPS 1
H T+ TPQQNGVAER+NRT++ + +CMLS++ + + FWAEAA+TACYL+NRSPS
Sbjct: 577 HHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPS 631
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 456 bits (1172), Expect = e-125
Identities = 232/434 (53%), Positives = 293/434 (67%), Gaps = 11/434 (2%)
Frame = -2
Query: 1269 EGLIVRGRTSSRDQNNNGG-----SRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNE 1105
E L VRGR+ R N++ SR RSKSR + C YCKKK H EC KLQNK
Sbjct: 95 EALQVRGRSEQRTYNDSNDRDKNQSRGRSKSRGKKF-CKYCKKKNHFIEECWKLQNKEKR 153
Query: 1104 KSKEHAEASVAHEEIEDGD---VYSVTEDSSGK*GWILDSACSFHICFHRDWFSSYVPVD 934
KS A + + + GD V+ V S + WILD+ CSFHIC +RDWFSSY V
Sbjct: 154 KSDGKASVVTSADNSDSGDCLVVFVVCVSSHDE--WILDTTCSFHICINRDWFSSYKSVQ 211
Query: 933 KG-VVLMGDDHPCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFA 757
G VV MGDD+P ++GIG+V++K HDG+ RTL +VRH+P M++NLISLS LD G ++
Sbjct: 212 NGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPRMARNLISLSTLDAEGYKYS 271
Query: 756 GGGGVLRVLKGALVVMKASL-VGTLYRLQXXXXXXXXXXXXXXXXXXV-TRLWHMRLGHM 583
G GGV++V KG+LV M + LY L+ T +WHMRLGHM
Sbjct: 272 GSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGYVTAAVVSKDEPSKTNMWHMRLGHM 331
Query: 582 SEKGLAMLSKRSLLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPA 403
SE G+A L KR+LL + ++FCEHCVFGK KRV F+T +H+TKG LDY+H+DLWGP+
Sbjct: 332 SELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPS 391
Query: 402 RTASKGGGRYMFTFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNG 223
R S GG RYM T IDD+SRKVW YFLKHK+D FA FK+WK ++++QTE+ VK LRTDNG
Sbjct: 392 RKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIKRQTEKEVKVLRTDNG 451
Query: 222 LEFCDGVFNEFCRNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAE 43
FC F+++CR EGIV H T+ TPQQNGVAER+NRT++ K +CMLSN+ + + FWAE
Sbjct: 452 GGFCSDAFDDYCRKEGIVMHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAE 511
Query: 42 AAATACYLVNRSPS 1
AA TACYL+NRSPS
Sbjct: 512 AAKTACYLINRSPS 525
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 451 bits (1161), Expect = e-124
Identities = 233/437 (53%), Positives = 292/437 (66%), Gaps = 14/437 (3%)
Frame = -2
Query: 1269 EGLIVRGRTSSRDQNNNGG-----SRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNE 1105
E L VRGR+ R N++ SR RSKSR + C YCKKK H EC KLQNK
Sbjct: 200 EALQVRGRSEQRTYNDSNDHDKSQSRGRSKSRGKKF-CKYCKKKNHFIEECWKLQNKEKR 258
Query: 1104 KSKEHAEASVAHEEIEDGDV------YSVTEDSSGK*GWILDSACSFHICFHRDWFSSYV 943
KS A + E + GD Y + D WILD+ACSFHIC +RDWFSSY
Sbjct: 259 KSDGKASVVTSAENSDSGDCLVVFAGYVASHDE-----WILDTACSFHICINRDWFSSYK 313
Query: 942 PV-DKGVVLMGDDHPCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGC 766
V ++ VV MGDD+P ++GIG+V++K HDG+ RTL +VRH+P M++NLISLS LD G
Sbjct: 314 SVQNEDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGY 373
Query: 765 SFAGGGGVLRVLKGALVVMKASL-VGTLYRLQXXXXXXXXXXXXXXXXXXV-TRLWHMRL 592
++G GGV++V KG+LV M + LY L+ T LWHMRL
Sbjct: 374 KYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVTKDEPSKTNLWHMRL 433
Query: 591 GHMSEKGLAMLSKRSLLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLW 412
GHMSE G+A L KR+LL + ++FCEHCVFGK KRV F+T +H+TKG LDY+H+DLW
Sbjct: 434 GHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLW 493
Query: 411 GPARTASKGGGRYMFTFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRT 232
GP+R S GG RYM T IDD+SRK W YFLKHK+D FA FK+ K ++E+QTE+ VK L T
Sbjct: 494 GPSRKPSLGGARYMLTIIDDYSRKEWPYFLKHKDDTFAAFKERKVMIERQTEKEVKVLCT 553
Query: 231 DNGLEFCDGVFNEFCRNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDF 52
DNG EFC F+++CR EGIVRH T+ TPQQNGVAER+NRT++ K +CMLSN+ + + F
Sbjct: 554 DNGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRF 613
Query: 51 WAEAAATACYLVNRSPS 1
WAEAA TACYL+NRSPS
Sbjct: 614 WAEAANTACYLINRSPS 630
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 449 bits (1155), Expect = e-123
Identities = 231/432 (53%), Positives = 290/432 (67%), Gaps = 9/432 (2%)
Frame = -2
Query: 1269 EGLIVRGRTSSRDQNNNGG-----SRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNE 1105
E L V+GR+ R N++ SR RSKSR + C YCKKK H EC KLQNK
Sbjct: 200 EALQVKGRSEQRTYNDSNDRDKSKSRGRSKSRGKKF-CKYCKKKIHFIKECWKLQNKEKR 258
Query: 1104 KSKEHAEASVAHEEIEDGDVYSVTEDS-SGK*GWILDSACSFHICFHRDWFSSYVPVDKG 928
KS A + + + GD V + WILD+ACSFHI +RDWFSSY V G
Sbjct: 259 KSDGKASVVTSAKNSDSGDCLVVFAGCVASHDEWILDTACSFHIYINRDWFSSYKSVQNG 318
Query: 927 -VVLMGDDHPCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGG 751
VV MG+D+P ++GIG+V++K HDGI RTL +VRH+P M++NLISLS LD G ++G
Sbjct: 319 DVVRMGNDNPREIVGIGSVQIKTHDGITRTLKDVRHIPGMARNLISLSTLDAEGYKYSGS 378
Query: 750 GGVLRVLKGALVVMKASL-VGTLYRLQXXXXXXXXXXXXXXXXXXV-TRLWHMRLGHMSE 577
GGV++V KG+LV M + LY L+ T LWHMRLGHMSE
Sbjct: 379 GGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVTKDEPNKTNLWHMRLGHMSE 438
Query: 576 KGLAMLSKRSLLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPART 397
G+A L KR+LL + ++FCE CVFGK KRV F+T +H+TKG LDY+H+DLWGP+R
Sbjct: 439 LGMAELMKRNLLDGCTQGNMKFCERCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRK 498
Query: 396 ASKGGGRYMFTFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLE 217
S GG RYM T IDD+SRKVW YFLKHK+D FA FK+WK ++E+QTE+ VK LRTDN E
Sbjct: 499 PSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQTEKEVKVLRTDNAGE 558
Query: 216 FCDGVFNEFCRNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAA 37
FC F+++CR EGIVRH T+ TPQQNGVAER+NRT++ K +CMLSN+ + + FWAEAA
Sbjct: 559 FCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAA 618
Query: 36 ATACYLVNRSPS 1
TACYL+NRSPS
Sbjct: 619 NTACYLINRSPS 630
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 442 bits (1137), Expect = e-121
Identities = 230/471 (48%), Positives = 303/471 (64%), Gaps = 7/471 (1%)
Frame = -2
Query: 1392 LIYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNNNGG 1213
++YS TL L++V +L++KE K + E L+V R Q N
Sbjct: 162 ILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQA-----ESLVVGVGNRRRTQTTNQ- 215
Query: 1212 SRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNE--KSKEHAEASVAHEEIEDGDV-- 1045
IK + + +++ E K +E +A+V +E D ++
Sbjct: 216 ---------------------EIKAQVATVGDQSPEAGKKEEEGKAAVVTDEKSDAELLV 254
Query: 1044 -YSVTEDSSGK*GWILDSACSFHICFHRDWFSSYVPVDKGVVLMGDDHPCCVIGIGTVRV 868
Y +S + WILD+AC++H+C +RDWF++Y V G VLMGDD PC V GIGTV++
Sbjct: 255 AYVGCAQTSDQ--WILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQI 312
Query: 867 KMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKGALVVMKASLVGT 688
KM DG IRTLS+VRH+P++ ++LIS LD+ G ++GG G+L+V KG+LVVMKA +
Sbjct: 313 KMFDGCIRTLSDVRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSA 372
Query: 687 -LYRLQXXXXXXXXXXXXXXXXXXV-TRLWHMRLGHMSEKGLAMLSKRSLLGDRSISKLE 514
LY L+ T LWHMRLGHMSE GLA LSKR LL +SI KL+
Sbjct: 373 NLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLK 432
Query: 513 FCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYMFTFIDDFSRKVW 334
FCEHC+FGK KRV F+T H T+G LDY+HSDLWGPAR S GG RY+ T +DD+SRKVW
Sbjct: 433 FCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVW 492
Query: 333 VYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEFCRNEGIVRHLTV 154
YFLKHK F +FK+WK +VE+QTER+VK LRTDNG+EFC +F +C++EGIVRH T+
Sbjct: 493 PYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTI 552
Query: 153 RGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNRSPS 1
TPQQNGVAER+NRT++ K +CMLSN+GL + FWAEA +TACYL+NRSPS
Sbjct: 553 PHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPS 603
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 440 bits (1131), Expect = e-120
Identities = 224/467 (47%), Positives = 298/467 (63%), Gaps = 5/467 (1%)
Frame = -2
Query: 1389 IYSSKTLKLEDVKASLYSKELFDKELTXXXXXXXXXXXXGEGLIVRGRTSSRDQNNNGG- 1213
I T+ LE+V+++L+S+EL K GL TSSR NGG
Sbjct: 161 IVGKDTVSLEEVRSALHSRELRHKA------NGTSTDIQPSGLF----TSSRKGRKNGGK 210
Query: 1212 -SRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNEKSKEHAEASVAHEEIEDGDVYSV 1036
++P SK + +C+YCK+KGH K +C K K + K+ A+VA E+ + ++
Sbjct: 211 KNKPMSKGAKPDDVCNYCKEKGHWKFDCPK---KKKQSEKQSVSAAVAEEDTNSEEDIAL 267
Query: 1035 TEDSSGK*G--WILDSACSFHICFHRDWFSSYVPVDKGVVLMGDDHPCCVIGIGTVRVKM 862
D W+LDS S+HIC R+WF++Y VD G + M + C V+G G+++++
Sbjct: 268 VADEHTHHSDVWVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRT 327
Query: 861 HDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGGGGVLRVLKGALVVMKASLVGTLY 682
HDG TL+EVRHVP M+KNLISLS LD G S++G GVLRV KG+ +++K + GTLY
Sbjct: 328 HDGSFCTLNEVRHVPLMTKNLISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLY 387
Query: 681 RLQXXXXXXXXXXXXXXXXXXV-TRLWHMRLGHMSEKGLAMLSKRSLLGDRSISKLEFCE 505
LQ T+LWH+RLGHM E+G+ +LSK LL + LEFCE
Sbjct: 388 FLQGSTVTGSAHVASSEFHQKDMTKLWHIRLGHMGERGMQILSKEDLLAGHKVKSLEFCE 447
Query: 504 HCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPARTASKGGGRYMFTFIDDFSRKVWVYF 325
HCVFGK R F IH+TKGTLDYIHSD WGP R S GG R+ + IDD+SR WVY
Sbjct: 448 HCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWGPCRVESLGGCRFFVSIIDDYSRMTWVYM 507
Query: 324 LKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLEFCDGVFNEFCRNEGIVRHLTVRGT 145
+KHK++ F FK+WK L+E QT +++KRLRTDNGLEFC F++FC++EGI RH TVR T
Sbjct: 508 MKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNT 567
Query: 144 PQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAAATACYLVNRSP 4
PQQNGVAER+N+TL+E+ +CMLSN+GL + FWAEA +TACYL+NR P
Sbjct: 568 PQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGP 614
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 434 bits (1117), Expect = e-119
Identities = 223/432 (51%), Positives = 284/432 (65%), Gaps = 9/432 (2%)
Frame = -2
Query: 1269 EGLIVRGRTSSRDQNNNGG-----SRPRSKSRFRNLICHYCKKKGHIKTECRKLQNKNNE 1105
+ L VRGR+ R N++ SR RSKSR + C YCKKK H EC KLQNK
Sbjct: 197 KALQVRGRSEQRTYNDSNDRDKSQSRGRSKSRGKKF-CKYCKKKNHFIEECWKLQNKEKR 255
Query: 1104 KSKEHAEASVAHEEIEDGDVYSVTEDS-SGK*GWILDSACSFHICFHRDWFSSYVPVDKG 928
KS A + E + D + WILD+AC F IC +RDWFSS+ V G
Sbjct: 256 KSDGKASVVTSAENSDSADCLVFFAGCVASHDEWILDTACLFLICINRDWFSSHKSVQNG 315
Query: 927 -VVLMGDDHPCCVIGIGTVRVKMHDGIIRTLSEVRHVPDMSKNLISLSALDKSGCSFAGG 751
VV MGD++P ++GIG+V++K HDG+ RTL +VRH+P M++NLISLS LD G ++G
Sbjct: 316 DVVRMGDNNPREIMGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKYSGS 375
Query: 750 GGVLRVLKGALVVMKASL-VGTLYRLQXXXXXXXXXXXXXXXXXXV-TRLWHMRLGHMSE 577
GGV++V KG+LV M + LY L+ T LWHMRLGHMSE
Sbjct: 376 GGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSLTAAAVSKDEPSKTNLWHMRLGHMSE 435
Query: 576 KGLAMLSKRSLLGDRSISKLEFCEHCVFGKQKRVSFSTGIHKTKGTLDYIHSDLWGPART 397
G+A L KR+LL + ++FCEHCVFGK KRV F+T +H+TKG LDY+H+DLWGP+R
Sbjct: 436 LGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRK 495
Query: 396 ASKGGGRYMFTFIDDFSRKVWVYFLKHKNDVFAIFKQWKALVEKQTERRVKRLRTDNGLE 217
S GG YM T IDD+SRKVW YFLKHK+D FA FK+WK ++E+Q E+ VK LRTDNG E
Sbjct: 496 PSLGGACYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQAEKEVKVLRTDNGGE 555
Query: 216 FCDGVFNEFCRNEGIVRHLTVRGTPQQNGVAERVNRTLMEKVQCMLSNSGLAQDFWAEAA 37
FC F+++CR EGI RH T+ TPQQN VAER+NRT++ K +CMLSN+ + + +WAEAA
Sbjct: 556 FCSDAFDDYCRKEGIGRHHTIPYTPQQNSVAERMNRTIISKARCMLSNARMNKHYWAEAA 615
Query: 36 ATACYLVNRSPS 1
T CYL+NRSPS
Sbjct: 616 NTTCYLINRSPS 627