BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00016475
         (613 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008381760.1| PREDICTED: probable RNA-dependent RNA polyme...   283   5e-74
ref|XP_010093320.1| RNA-dependent RNA polymerase 1 [Morus notabi...   281   2e-73
ref|XP_009351561.1| PREDICTED: probable RNA-dependent RNA polyme...   279   8e-73
ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   270   5e-70
ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   270   5e-70
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   269   1e-69
ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prun...   268   2e-69
ref|XP_008220919.1| PREDICTED: probable RNA-dependent RNA polyme...   267   4e-69
gb|KDO60789.1| hypothetical protein CISIN_1g0025861mg, partial [...   265   1e-68
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   265   2e-68
ref|XP_012463738.1| PREDICTED: RNA-dependent RNA polymerase 1 [G...   264   2e-68
ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   264   2e-68
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   264   2e-68
ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polyme...   264   3e-68
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      264   3e-68
ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   263   7e-68
ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   263   7e-68
ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   263   7e-68
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      261   2e-67
gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gos...   261   3e-67

>ref|XP_008381760.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Malus domestica]
            gi|657979585|ref|XP_008381761.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Malus domestica]
          Length = 1114

 Score =  283 bits (724), Expect = 5e-74
 Identities = 131/173 (75%), Positives = 154/173 (89%)
 Frame = -3

Query: 611  SFTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILR 432
            SFT +VA++SYDPDMEVDGFEDY++DA YYK +YDYKLGNL+DYYGIKTEAEILSGS++R
Sbjct: 942  SFTRQVAKQSYDPDMEVDGFEDYIEDAIYYKGNYDYKLGNLMDYYGIKTEAEILSGSVMR 1001

Query: 431  MSKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYW 252
            MSKSFTKRRDA+SINMAVR+LRKEAR WFNEK +G D  +DD+YAKASAWYHVTYHP Y+
Sbjct: 1002 MSKSFTKRRDADSINMAVRSLRKEARAWFNEKGTGLDSGADDVYAKASAWYHVTYHPDYF 1061

Query: 251  GSYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRLN 93
            G+YNEG+NRDH++SF WCVYD+LV IK+DKAS RR L +SSLE  F  GL L+
Sbjct: 1062 GTYNEGLNRDHFISFPWCVYDKLVVIKKDKASMRRSLHMSSLERQFRSGLHLS 1114


>ref|XP_010093320.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
            gi|587864166|gb|EXB53859.1| RNA-dependent RNA polymerase
            1 [Morus notabilis]
          Length = 1133

 Score =  281 bits (720), Expect = 2e-73
 Identities = 134/171 (78%), Positives = 148/171 (86%)
 Frame = -3

Query: 608  FTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILRM 429
            FT EVA +SYDPDME DGFEDY+DDA+YYK++YDYKLGNLLDYYGIK+EAEI+ GSI+RM
Sbjct: 962  FTKEVASRSYDPDMEYDGFEDYIDDAFYYKSNYDYKLGNLLDYYGIKSEAEIIGGSIMRM 1021

Query: 428  SKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYWG 249
            SKSFTKRRDAESINMAVRALRKEAR WFNEK S  D  +DD+YAKASAWY+VTYH SYWG
Sbjct: 1022 SKSFTKRRDAESINMAVRALRKEARTWFNEKGSSLDSAADDVYAKASAWYYVTYHHSYWG 1081

Query: 248  SYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRL 96
             YNEGMNRDHYLSF WCVYD+LV+IK  KAS RR LQ+SSLE  F   L L
Sbjct: 1082 CYNEGMNRDHYLSFPWCVYDKLVQIKRSKASVRRSLQMSSLERAFDRRLHL 1132


>ref|XP_009351561.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Pyrus x
            bretschneideri] gi|694320773|ref|XP_009351562.1|
            PREDICTED: probable RNA-dependent RNA polymerase 1 [Pyrus
            x bretschneideri]
          Length = 1116

 Score =  279 bits (714), Expect = 8e-73
 Identities = 129/173 (74%), Positives = 152/173 (87%)
 Frame = -3

Query: 611  SFTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILR 432
            SFT +VA++SYDPDMEVDGFEDY++DA YYK +YDYKLGNL+DYYGIKTEAEIL GS++R
Sbjct: 944  SFTRQVAKQSYDPDMEVDGFEDYIEDAIYYKGNYDYKLGNLMDYYGIKTEAEILGGSVMR 1003

Query: 431  MSKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYW 252
            MSKSFTKRRDA+SINMAVR+LRKEAR WFNEK +G D  +DD+YAKASAWYHVTYHP Y+
Sbjct: 1004 MSKSFTKRRDADSINMAVRSLRKEARAWFNEKGTGLDSGADDVYAKASAWYHVTYHPDYF 1063

Query: 251  GSYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRLN 93
            G+YNEG+NRDH++SF WCVYD+LV IK+DKAS RR L +S LE  F  GL L+
Sbjct: 1064 GTYNEGLNRDHFISFPWCVYDKLVLIKKDKASMRRSLHMSPLERQFRSGLHLS 1116


>ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
            euphratica]
          Length = 1132

 Score =  270 bits (690), Expect = 5e-70
 Identities = 123/173 (71%), Positives = 151/173 (87%)
 Frame = -3

Query: 611  SFTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILR 432
            SFTS+VAR+ YDPDMEVDGFEDY+DDA+YYK++YDYKLGNL++YYGIKTEAE+LSGS ++
Sbjct: 960  SFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMK 1019

Query: 431  MSKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYW 252
            MSKSFTK+RDAE+I MAVR+LRKEAR+WFNEK SG D ++DD+ AKASAWYHVTYH +YW
Sbjct: 1020 MSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHNYW 1079

Query: 251  GSYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRLN 93
            G YNEGMNRDH+LSF WC+YD+L++IK++ A  RR   L S+E  F  GL L+
Sbjct: 1080 GCYNEGMNRDHFLSFPWCLYDKLIQIKKNSARIRRSRILHSVERQFSRGLHLS 1132


>ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Populus
            euphratica]
          Length = 1132

 Score =  270 bits (690), Expect = 5e-70
 Identities = 123/173 (71%), Positives = 151/173 (87%)
 Frame = -3

Query: 611  SFTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILR 432
            SFTS+VAR+ YDPDMEVDGFEDY+DDA+YYK++YDYKLGNL++YYGIKTEAE+LSGS ++
Sbjct: 960  SFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMK 1019

Query: 431  MSKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYW 252
            MSKSFTK+RDAE+I MAVR+LRKEAR+WFNEK SG D ++DD+ AKASAWYHVTYH +YW
Sbjct: 1020 MSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHNYW 1079

Query: 251  GSYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRLN 93
            G YNEGMNRDH+LSF WC+YD+L++IK++ A  RR   L S+E  F  GL L+
Sbjct: 1080 GCYNEGMNRDHFLSFPWCLYDKLIQIKKNSARIRRSRILHSVERQFSRGLHLS 1132


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  269 bits (687), Expect = 1e-69
 Identities = 124/174 (71%), Positives = 152/174 (87%), Gaps = 1/174 (0%)
 Frame = -3

Query: 611  SFTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILR 432
            SFTS+VAR+ YDPDMEVDGFEDY+DDA+YYK++YDYKLGNL++YYGIKTEAE+LSGS ++
Sbjct: 960  SFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMK 1019

Query: 431  MSKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYW 252
            MSKSFTK+RDAE+I MAVR+L+KEAR+WFNEK SG D ++DD+ AKASAWYHVTYH +YW
Sbjct: 1020 MSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHNYW 1079

Query: 251  GSYNEGMNRDHYLSFAWCVYDRLVEIKEDKASR-RRHLQLSSLEEHFCYGLRLN 93
            G YNEGMNRDH+LSF WCVYD+L++IK   ++R RR L L S+E  F  GL L+
Sbjct: 1080 GCYNEGMNRDHFLSFPWCVYDKLIQIKRRNSARIRRSLILPSVERQFSRGLHLS 1133


>ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prunus persica]
            gi|462422197|gb|EMJ26460.1| hypothetical protein
            PRUPE_ppa001524mg [Prunus persica]
          Length = 808

 Score =  268 bits (684), Expect = 2e-69
 Identities = 126/173 (72%), Positives = 148/173 (85%)
 Frame = -3

Query: 611  SFTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILR 432
            SF+ EVAR+SYD DMEVDGFEDY++DA+YYK++YD  LGNLLDYYGIKTEAEILSGS+++
Sbjct: 636  SFSREVARQSYDRDMEVDGFEDYIEDAFYYKSNYDSILGNLLDYYGIKTEAEILSGSVMK 695

Query: 431  MSKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYW 252
            MSKSFTKRRD + INMAVR+LRKEAR WFNEK +G D  +DD+YAKASAWYHVTYHP Y+
Sbjct: 696  MSKSFTKRRDIDPINMAVRSLRKEARTWFNEKATGLDSGADDVYAKASAWYHVTYHPKYF 755

Query: 251  GSYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRLN 93
            G YNEG+NRDH++SF WCVYD+LV IK++KAS RR   LSSLE  F   L LN
Sbjct: 756  GCYNEGLNRDHFISFPWCVYDKLVHIKKEKASVRRARNLSSLERRFRNDLHLN 808


>ref|XP_008220919.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Prunus mume]
          Length = 1123

 Score =  267 bits (682), Expect = 4e-69
 Identities = 125/173 (72%), Positives = 149/173 (86%)
 Frame = -3

Query: 611  SFTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILR 432
            SF+ EVAR+SYD DMEVDGFEDY++DA YYK++YD  LGNLLDYYGIKTEAEILSGS+++
Sbjct: 951  SFSREVARQSYDHDMEVDGFEDYIEDALYYKSNYDSILGNLLDYYGIKTEAEILSGSVMK 1010

Query: 431  MSKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYW 252
            MSKSFTK+RD + INMAVR+LRK+AR WFNEK +G +  +DD+YAKASAWYHVTYHP Y+
Sbjct: 1011 MSKSFTKKRDMDPINMAVRSLRKDARTWFNEKATGLNSGADDVYAKASAWYHVTYHPKYF 1070

Query: 251  GSYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRLN 93
            G YNEG+NRDH++SF WCVYD+LV IK++KAS RR L LSSLE  F  GL LN
Sbjct: 1071 GCYNEGLNRDHFISFPWCVYDKLVHIKKEKASVRRALNLSSLESRFRNGLHLN 1123


>gb|KDO60789.1| hypothetical protein CISIN_1g0025861mg, partial [Citrus sinensis]
          Length = 324

 Score =  265 bits (677), Expect = 1e-68
 Identities = 129/171 (75%), Positives = 145/171 (84%)
 Frame = -3

Query: 608 FTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILRM 429
           FT EVAR+SYDPDMEVDGFED++DDA Y+K +YDYKLGNL+DYYGIKTEAEIL+GSI++M
Sbjct: 157 FTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKM 216

Query: 428 SKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYWG 249
           SKSFTKRRDAE+I MAVRALRKEAR WF EK SG D E DD YAKASAWYHVTYHP YWG
Sbjct: 217 SKSFTKRRDAEAIGMAVRALRKEARAWFKEK-SGSDTE-DDAYAKASAWYHVTYHPDYWG 274

Query: 248 SYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRL 96
            YN+GMNRDH+LSF WCVYDRLVEIK+DK S        +LE+ F  GLR+
Sbjct: 275 CYNQGMNRDHFLSFPWCVYDRLVEIKKDKTSIGN--AFPALEQQFRQGLRM 323


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  265 bits (676), Expect = 2e-68
 Identities = 123/173 (71%), Positives = 151/173 (87%)
 Frame = -3

Query: 611  SFTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILR 432
            S T E   + YDPDMEVDG+EDY+DDA+Y+K++YDYKLGNL++YYGIKTEAEILSG I++
Sbjct: 938  SLTRERLERFYDPDMEVDGYEDYVDDAFYHKSNYDYKLGNLMEYYGIKTEAEILSGGIMK 997

Query: 431  MSKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYW 252
            MS+SFTK+RDAE+I +AVR+LRKEAR+WFNEK +G D E+DDLYAKASAWYHVTYHPSYW
Sbjct: 998  MSRSFTKQRDAEAIGVAVRSLRKEARSWFNEKGNGLDSEADDLYAKASAWYHVTYHPSYW 1057

Query: 251  GSYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRLN 93
            G YNEGMNR+H+LSF WCVYD+L+ IK+ K + RR+ +LSSLE  F  GLRL+
Sbjct: 1058 GLYNEGMNRNHFLSFPWCVYDKLILIKK-KVTSRRNSRLSSLESLFARGLRLH 1109


>ref|XP_012463738.1| PREDICTED: RNA-dependent RNA polymerase 1 [Gossypium raimondii]
            gi|763812161|gb|KJB79013.1| hypothetical protein
            B456_013G029000 [Gossypium raimondii]
          Length = 1110

 Score =  264 bits (675), Expect = 2e-68
 Identities = 121/171 (70%), Positives = 148/171 (86%)
 Frame = -3

Query: 605  TSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILRMS 426
            T E  ++ YDPDMEV+GFEDY+DDA+++K+ YDYKLGNL+DYYG+KTEAEILSG IL+MS
Sbjct: 940  TREKMQRFYDPDMEVEGFEDYIDDAFFHKSKYDYKLGNLMDYYGVKTEAEILSGGILKMS 999

Query: 425  KSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYWGS 246
            +SFTK+RDAE+I+MAVR+LRKEAR+WFNE+RS  D E DD YAKASAWY+VTYHPSYWG 
Sbjct: 1000 RSFTKKRDAEAISMAVRSLRKEARSWFNEERSELDEEIDDAYAKASAWYYVTYHPSYWGQ 1059

Query: 245  YNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRLN 93
            YNEGMNRDH+LSF WCVYD+L++IK++KA+ R  L LSSLE  F   L L+
Sbjct: 1060 YNEGMNRDHFLSFPWCVYDKLIQIKKEKAAVREALDLSSLEHRFQRRLHLH 1110


>ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 292

 Score =  264 bits (675), Expect = 2e-68
 Identities = 129/171 (75%), Positives = 144/171 (84%)
 Frame = -3

Query: 608 FTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILRM 429
           FT EVAR+SYDPDMEVDGFED++DDA Y+K +YDYKLGNL+DYYGIKTEAEIL+GSI++M
Sbjct: 125 FTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKM 184

Query: 428 SKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYWG 249
           SKSFTKRRDAE+I MAVRALRKEAR WF EK SG D E DD YAKASAWYHVTYHP YWG
Sbjct: 185 SKSFTKRRDAEAIGMAVRALRKEARAWFKEK-SGSDTE-DDAYAKASAWYHVTYHPDYWG 242

Query: 248 SYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRL 96
            YN GMNRDH+LSF WCVYDRLVEIK+DK S        +LE+ F  GLR+
Sbjct: 243 CYNHGMNRDHFLSFPWCVYDRLVEIKKDKTSIGN--AFPALEQQFRQGLRM 291


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  264 bits (675), Expect = 2e-68
 Identities = 129/171 (75%), Positives = 144/171 (84%)
 Frame = -3

Query: 608  FTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILRM 429
            FT EVAR+SYDPDMEVDGFED++DDA Y+K +YDYKLGNL+DYYGIKTEAEIL+GSI++M
Sbjct: 965  FTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKM 1024

Query: 428  SKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYWG 249
            SKSFTKRRDAE+I MAVRALRKEAR WF EK SG D E DD YAKASAWYHVTYHP YWG
Sbjct: 1025 SKSFTKRRDAEAIGMAVRALRKEARAWFKEK-SGSDTE-DDAYAKASAWYHVTYHPDYWG 1082

Query: 248  SYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRL 96
             YN GMNRDH+LSF WCVYDRLVEIK+DK S        +LE+ F  GLR+
Sbjct: 1083 CYNHGMNRDHFLSFPWCVYDRLVEIKKDKTSIGN--AFPALEQQFRQGLRM 1131


>ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
            gi|719962527|ref|XP_010275424.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
            gi|719962530|ref|XP_010275500.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
            gi|719962533|ref|XP_010275583.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
            gi|719962536|ref|XP_010275643.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
            gi|719962539|ref|XP_010275710.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
          Length = 1136

 Score =  264 bits (674), Expect = 3e-68
 Identities = 128/175 (73%), Positives = 147/175 (84%), Gaps = 2/175 (1%)
 Frame = -3

Query: 611  SFTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILR 432
            SFT EVAR+SYDPDMEVDGFEDYL DAYYYK  YD KLGNL+DYYGIKTEAEILSG+I++
Sbjct: 963  SFTQEVARRSYDPDMEVDGFEDYLSDAYYYKGEYDSKLGNLMDYYGIKTEAEILSGNIMK 1022

Query: 431  MSKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYW 252
            +SKSFTK+RDAE+I++AVR+LRKEAR WFNEK SG   E+DD+YAKASAWYHVTYHP YW
Sbjct: 1023 LSKSFTKKRDAEAISLAVRSLRKEARAWFNEK-SGPGPEADDVYAKASAWYHVTYHPDYW 1081

Query: 251  GSYNEGMNRDHYLSFAWCVYDRLVEIKEDKAS--RRRHLQLSSLEEHFCYGLRLN 93
            G YNEG+ RDH+LSF WCVYD+L+ IK +KAS  R R +  SSL   F   LRLN
Sbjct: 1082 GCYNEGLKRDHFLSFPWCVYDKLIHIKREKASIRRIRIIDESSLGLQFRRSLRLN 1136


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  264 bits (674), Expect = 3e-68
 Identities = 120/171 (70%), Positives = 147/171 (85%)
 Frame = -3

Query: 605  TSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILRMS 426
            T E  ++ YDPDMEV+GFEDY+DDA+++K+ YDYKLGNL+DYYG+KTEAEIL G I++MS
Sbjct: 940  TREKMQRFYDPDMEVEGFEDYIDDAFFHKSKYDYKLGNLMDYYGVKTEAEILGGGIMKMS 999

Query: 425  KSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYWGS 246
            +SFTK+RDAE+I+MAVR+LRKEAR+WFNEK S  D E DD YAKASAWY+VTYHPSYWG 
Sbjct: 1000 RSFTKKRDAEAISMAVRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYHPSYWGQ 1059

Query: 245  YNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRLN 93
            YNEGMNRDH+LSF WCVYD+L++IK++KA+ R  L LSSLE  F  GL L+
Sbjct: 1060 YNEGMNRDHFLSFPWCVYDKLIQIKKEKAAVREALDLSSLEHRFQRGLHLH 1110


>ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Jatropha curcas]
          Length = 1096

 Score =  263 bits (671), Expect = 7e-68
 Identities = 122/173 (70%), Positives = 145/173 (83%)
 Frame = -3

Query: 611  SFTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILR 432
            SFT EVAR+ YDPDMEVDGFEDY+DDA+YYK +YDYKLGN +DYYGI+TEAEIL GSI++
Sbjct: 928  SFTLEVARQCYDPDMEVDGFEDYIDDAFYYKTNYDYKLGNHMDYYGIRTEAEILGGSIMK 987

Query: 431  MSKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYW 252
            MSK+FTK+RDAE+I +AVR+LRKEAR+WF E+ SG D E DD+YAKASAWY+VTYHPSYW
Sbjct: 988  MSKAFTKKRDAEAIGLAVRSLRKEARSWFKERGSGLDSEEDDVYAKASAWYYVTYHPSYW 1047

Query: 251  GSYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRLN 93
            G YNEGMNRDH+LSF WCVYD+L++IK     +RR   LS LE  F  GL  +
Sbjct: 1048 GCYNEGMNRDHFLSFPWCVYDKLIQIKR----KRRCQNLSLLERQFGLGLHFH 1096


>ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
            curcas] gi|802596568|ref|XP_012072322.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
            curcas] gi|802596570|ref|XP_012072324.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
            curcas]
          Length = 1127

 Score =  263 bits (671), Expect = 7e-68
 Identities = 124/172 (72%), Positives = 147/172 (85%)
 Frame = -3

Query: 611  SFTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILR 432
            SFT EVAR+ YDPDMEVDGFEDY+DDA+YYK +YDYKLGN +DYYGI+TEAEIL GSI++
Sbjct: 959  SFTLEVARQCYDPDMEVDGFEDYIDDAFYYKTNYDYKLGNHMDYYGIRTEAEILGGSIMK 1018

Query: 431  MSKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYW 252
            MSK+FTK+RDAE+I +AVR+LRKEAR+WF E+ SG D E DD+YAKASAW++VTYHPSYW
Sbjct: 1019 MSKAFTKKRDAEAIGLAVRSLRKEARSWFKERGSGLDSEEDDVYAKASAWHYVTYHPSYW 1078

Query: 251  GSYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRL 96
            G YNEGMNRDH+LSF WCVYD+L++IK     +RR   LSSLE  F  GLRL
Sbjct: 1079 GRYNEGMNRDHFLSFPWCVYDKLIQIKR----KRRCQHLSSLERQF--GLRL 1124


>ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
            curcas]
          Length = 1144

 Score =  263 bits (671), Expect = 7e-68
 Identities = 124/172 (72%), Positives = 147/172 (85%)
 Frame = -3

Query: 611  SFTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILR 432
            SFT EVAR+ YDPDMEVDGFEDY+DDA+YYK +YDYKLGN +DYYGI+TEAEIL GSI++
Sbjct: 976  SFTLEVARQCYDPDMEVDGFEDYIDDAFYYKTNYDYKLGNHMDYYGIRTEAEILGGSIMK 1035

Query: 431  MSKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYW 252
            MSK+FTK+RDAE+I +AVR+LRKEAR+WF E+ SG D E DD+YAKASAW++VTYHPSYW
Sbjct: 1036 MSKAFTKKRDAEAIGLAVRSLRKEARSWFKERGSGLDSEEDDVYAKASAWHYVTYHPSYW 1095

Query: 251  GSYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRL 96
            G YNEGMNRDH+LSF WCVYD+L++IK     +RR   LSSLE  F  GLRL
Sbjct: 1096 GRYNEGMNRDHFLSFPWCVYDKLIQIKR----KRRCQHLSSLERQF--GLRL 1141


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  261 bits (668), Expect = 2e-67
 Identities = 120/171 (70%), Positives = 145/171 (84%)
 Frame = -3

Query: 605  TSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILRMS 426
            T E  ++ YDPDMEV+GF DY+DDA++YK+ YDYKLGNL+DYYG+KTEAEILSG I++MS
Sbjct: 940  TREKMKRFYDPDMEVEGFVDYIDDAFFYKSKYDYKLGNLMDYYGVKTEAEILSGGIMKMS 999

Query: 425  KSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYWGS 246
            +SFTK+RDAESI+MAVR+LRKEAR+WFNEK S  D E DD YAKASAWY+VTYH SYWG 
Sbjct: 1000 RSFTKKRDAESISMAVRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYHHSYWGQ 1059

Query: 245  YNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRLN 93
            YNEGMNRDH+LSF WCVYD+L++IK++KA+ R  L LSSLE  F  G  L+
Sbjct: 1060 YNEGMNRDHFLSFPWCVYDKLIQIKKEKAALREALDLSSLEHRFQRGFHLH 1110


>gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gossypium arboreum]
            gi|728850182|gb|KHG29625.1| RNA-dependent RNA polymerase
            1 -like protein [Gossypium arboreum]
          Length = 1110

 Score =  261 bits (666), Expect = 3e-67
 Identities = 120/171 (70%), Positives = 145/171 (84%)
 Frame = -3

Query: 605  TSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILRMS 426
            T E  ++ YDPDMEV+GFEDY+DDA++YK+ YDYKLGNL+DYYG+KTEAEILSG I++MS
Sbjct: 940  TREKMKRFYDPDMEVEGFEDYIDDAFFYKSKYDYKLGNLMDYYGVKTEAEILSGGIMKMS 999

Query: 425  KSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYWGS 246
            +SFTK+RDAE I+MAVR+LRKEAR+WFNEK S  D E DD YAKASAWY+VTYH SYWG 
Sbjct: 1000 RSFTKKRDAEVISMAVRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYHHSYWGQ 1059

Query: 245  YNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRLN 93
            YNEGMNRDH+LSF WCVYD+L++IK++KA+ R  L LSSLE  F  G  L+
Sbjct: 1060 YNEGMNRDHFLSFPWCVYDKLIQIKKEKAALREALDLSSLEHCFQRGFHLH 1110