BLASTX nr result
ID: Ziziphus21_contig00016375
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00016375
(1095 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009159802.1| Ycf68 protein (chloroplast) [Carnegiea gigan... 211 1e-56
dbj|BAF50334.1| hypothetical protein [Crucihimalaya wallichii] g... 221 1e-54
dbj|BAF50245.1| hypothetical protein [Capsella bursa-pastoris] g... 218 5e-54
ref|XP_003604154.1| ycf68 protein [Medicago truncatula] gi|35550... 155 2e-49
ref|YP_358635.1| ORF170 [Phalaenopsis aphrodite subsp. formosana... 167 2e-44
ref|YP_007026598.1| Ycf68 [Festuca ovina] gi|426406704|ref|YP_00... 122 3e-40
ref|YP_008239139.1| hypothetical chloroplast RF68 (chloroplast) ... 125 4e-40
ref|YP_009003874.1| hypothetical chloroplast RF68 [Deschampsia a... 122 3e-39
ref|YP_009144385.1| hypothetical chloroplast RF68 (plastid) [Car... 105 6e-38
ref|YP_009128439.1| hypothetical chloroplast RF68 (chloroplast) ... 132 3e-37
gb|AGZ19190.1| hypothetical chloroplast RF68 (chloroplast) [Came... 159 4e-36
gb|AIA24200.1| hypothetical chloroplast RF68 (plastid) [Indocala... 108 4e-35
ref|YP_004733623.1| hypothetical chloroplast RF68 (chloroplast) ... 108 4e-35
ref|YP_009034225.1| hypothetical chloroplast RF68 (plastid) [Dig... 107 8e-35
ref|YP_024330.1| hypothetical protein 133 [Saccharum hybrid cult... 107 1e-34
gb|ACI43247.1| unknown (chloroplast) [Coix lacryma-jobi] gi|2093... 107 1e-34
ref|YP_004841994.1| hypothetical chloroplast RF68 (chloroplast) ... 107 1e-34
ref|YP_004734230.1| hypothetical chloroplast RF68 (plastid) [Fer... 106 2e-34
emb|CAF28642.1| ycf68 [Nymphaea alba] gi|50250389|emb|CAF28655.1... 138 2e-34
ref|YP_009034238.1| hypothetical chloroplast RF68 (plastid) [Dig... 107 3e-34
>ref|YP_009159802.1| Ycf68 protein (chloroplast) [Carnegiea gigantea]
gi|896560933|gb|AKR06823.1| Ycf68 protein (chloroplast)
[Carnegiea gigantea]
Length = 131
Score = 211 bits (536), Expect(2) = 1e-56
Identities = 101/112 (90%), Positives = 104/112 (92%)
Frame = -1
Query: 708 LRRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGV*NRTSPQEDRWGDSG 529
+RRCAWAVR L+HMDSSMC SAPD EMWIIQGTLAWRT PVRTGV N+TSPQEDRWGDSG
Sbjct: 1 MRRCAWAVRTLNHMDSSMCPSAPDLEMWIIQGTLAWRTPPVRTGVLNQTSPQEDRWGDSG 60
Query: 528 EIQCRSNFLFTRGIRAVREGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNG 373
EIQCRSNF FTRGIRAVR GP RLLSSRESIHPLSVYGQLSLEHRFRFGLNG
Sbjct: 61 EIQCRSNFRFTRGIRAVRGGPLRLLSSRESIHPLSVYGQLSLEHRFRFGLNG 112
Score = 38.1 bits (87), Expect(2) = 1e-56
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2
Query: 365 NGAPNNVSSQTKNYEIAP 312
NGAPNN SSQTKNYEI P
Sbjct: 113 NGAPNNASSQTKNYEITP 130
>dbj|BAF50334.1| hypothetical protein [Crucihimalaya wallichii]
gi|134286725|dbj|BAF50348.1| hypothetical protein
[Crucihimalaya wallichii] gi|134286888|dbj|BAF50509.1|
hypothetical protein [Lepidium virginicum]
gi|134286902|dbj|BAF50523.1| hypothetical protein
[Lepidium virginicum] gi|134286977|dbj|BAF50597.1|
hypothetical protein [Lobularia maritima]
gi|134286991|dbj|BAF50611.1| hypothetical protein
[Lobularia maritima]
Length = 111
Score = 221 bits (562), Expect = 1e-54
Identities = 107/110 (97%), Positives = 107/110 (97%)
Frame = -3
Query: 361 EHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPSRKEEREI 182
EHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIF ILPSRKEEREI
Sbjct: 2 EHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFLILPSRKEEREI 61
Query: 181 FFPFRRDQEIGSSRKKNAWLINNSLLGLRPPQSLRTPPISAMGCVYLSIS 32
FPFRRDQEIGSSRKKNAWLINNSLLGLRPPQSLRTPPISAMG VYLSIS
Sbjct: 62 LFPFRRDQEIGSSRKKNAWLINNSLLGLRPPQSLRTPPISAMGRVYLSIS 111
>dbj|BAF50245.1| hypothetical protein [Capsella bursa-pastoris]
gi|134286635|dbj|BAF50259.1| hypothetical protein
[Capsella bursa-pastoris]
Length = 111
Score = 218 bits (556), Expect = 5e-54
Identities = 106/110 (96%), Positives = 106/110 (96%)
Frame = -3
Query: 361 EHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPSRKEEREI 182
EHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIF ILPSRKEEREI
Sbjct: 2 EHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFLILPSRKEEREI 61
Query: 181 FFPFRRDQEIGSSRKKNAWLINNSLLGLRPPQSLRTPPISAMGCVYLSIS 32
FPFRRDQEIGSSRKKNAWLINNSLLGLRPPQSLRTPPISA G VYLSIS
Sbjct: 62 LFPFRRDQEIGSSRKKNAWLINNSLLGLRPPQSLRTPPISAKGRVYLSIS 111
>ref|XP_003604154.1| ycf68 protein [Medicago truncatula] gi|355505209|gb|AES86351.1|
ycf68 protein [Medicago truncatula]
Length = 237
Score = 155 bits (391), Expect(2) = 2e-49
Identities = 81/107 (75%), Positives = 83/107 (77%)
Frame = -1
Query: 684 RALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGV*NRTSPQEDRWGDSGEIQCRSNF 505
RALSH+DSSMCSSAPDPEMWIIQGTL EDRWGDSGEIQCRSNF
Sbjct: 119 RALSHIDSSMCSSAPDPEMWIIQGTL------------------EDRWGDSGEIQCRSNF 160
Query: 504 LFTRGIRAVREGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK 364
LFTRGIRAV+ GP LLSSRE IHPLSVYGQLSLEHRFRFGLN K K
Sbjct: 161 LFTRGIRAVQGGPSWLLSSREFIHPLSVYGQLSLEHRFRFGLNRKRK 207
Score = 70.1 bits (170), Expect(2) = 2e-49
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -3
Query: 373 ENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPF 278
+ KTEHLTTYLHRPRTTRSPLSFWGDGGIVPF
Sbjct: 205 KRKTEHLTTYLHRPRTTRSPLSFWGDGGIVPF 236
>ref|YP_358635.1| ORF170 [Phalaenopsis aphrodite subsp. formosana]
gi|58802851|gb|AAW82571.1| ORF170 [Phalaenopsis
aphrodite subsp. formosana]
Length = 170
Score = 167 bits (424), Expect(2) = 2e-44
Identities = 96/149 (64%), Positives = 106/149 (71%), Gaps = 1/149 (0%)
Frame = -3
Query: 520 M*IQLSIHSWDXXXXXXXXXXPLFSRIHTSLISIWTAISRAQV*VRPQWENKTEHLTTYL 341
M I+LSIHSWD L SR +S++ +S +R K EHLTT+L
Sbjct: 1 MEIELSIHSWDPGGPGGPPRL-LSSRESIHPLSVYGQLSLEHR-LRFGLNEKMEHLTTHL 58
Query: 340 HRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPSRKEEREIFFPFRRD 161
HRPRTTRSPLSFWGD GI+PFEPFFHA GGL+KAAINRIF+ILPSRKEEREI FPFRRD
Sbjct: 59 HRPRTTRSPLSFWGDRGIIPFEPFFHA--GGLKKAAINRIFRILPSRKEEREILFPFRRD 116
Query: 160 QEIGSSRKKNAWL-INNSLLGLRPPQSLR 77
QEIGSS L INNSLLG RPPQSLR
Sbjct: 117 QEIGSSHNIRRMLGINNSLLGFRPPQSLR 145
Score = 40.4 bits (93), Expect(2) = 2e-44
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -2
Query: 68 DQCNGMCLFIYLLTQNG 18
DQCNGMCLFIYLLT+NG
Sbjct: 149 DQCNGMCLFIYLLTRNG 165
>ref|YP_007026598.1| Ycf68 [Festuca ovina] gi|426406704|ref|YP_007026612.1| Ycf68
[Festuca ovina] gi|427437039|ref|YP_007026512.1| Ycf68
[Festuca altissima] gi|427437040|ref|YP_007026526.1|
Ycf68 [Festuca altissima] gi|410177830|gb|AFV62711.1|
Ycf68 (plastid) [Festuca altissima]
gi|410177831|gb|AFV62712.1| Ycf68 (plastid) [Festuca
altissima] gi|410177917|gb|AFV62797.1| Ycf68 (plastid)
[Festuca ovina] gi|410177918|gb|AFV62798.1| Ycf68
(plastid) [Festuca ovina]
Length = 144
Score = 122 bits (307), Expect(2) = 3e-40
Identities = 57/65 (87%), Positives = 59/65 (90%)
Frame = -3
Query: 367 KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPSRKEER 188
K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINR F ILP +EER
Sbjct: 80 KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRTFLILPYFQEER 139
Query: 187 EIFFP 173
EI FP
Sbjct: 140 EILFP 144
Score = 71.6 bits (174), Expect(2) = 3e-40
Identities = 40/63 (63%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Frame = -1
Query: 531 GEIQCRSN----FLFTRGIRAVREGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK 364
G IQ RS+ F G EGPPRLLSSRESIHPLSVYG+LSLEHR RF LNGK++
Sbjct: 23 GAIQVRSHVDLTFYSLVGSGRSGEGPPRLLSSRESIHPLSVYGELSLEHRLRFVLNGKME 82
Query: 363 RST 355
T
Sbjct: 83 HLT 85
>ref|YP_008239139.1| hypothetical chloroplast RF68 (chloroplast) [Triticum monococcum]
gi|525782260|ref|YP_008239216.1| hypothetical
chloroplast RF68 (chloroplast) [Secale cereale]
gi|525782323|ref|YP_008239276.1| hypothetical
chloroplast RF68 (chloroplast) [Triticum urartu]
gi|533310152|ref|YP_008474346.1| hypothetical
chloroplast RF68 (chloroplast) [Aegilops tauschii]
gi|533310247|ref|YP_008474437.1| hypothetical
chloroplast RF68 (chloroplast) [Aegilops speltoides]
gi|568245043|ref|YP_008963951.1| hypothetical
chloroplast RF68 (chloroplast) [Aegilops geniculata]
gi|568247039|ref|YP_008963872.1| hypothetical
chloroplast RF68 (chloroplast) [Aegilops cylindrica]
gi|384406899|gb|AFH89556.1| hypothetical chloroplast
RF68 (chloroplast) [Aegilops tauschii]
gi|394986538|gb|AFN42419.1| hypothetical chloroplast
RF68 (chloroplast) [Aegilops speltoides]
gi|521301237|gb|AGP51037.1| hypothetical chloroplast
RF68 (chloroplast) [Triticum monococcum]
gi|521301314|gb|AGP51113.1| hypothetical chloroplast
RF68 (chloroplast) [Secale cereale]
gi|521301454|gb|AGP51251.1| hypothetical chloroplast
RF68 (chloroplast) [Triticum urartu]
gi|521301533|gb|AGP51329.1| hypothetical chloroplast
RF68 (chloroplast) [Triticum aestivum]
gi|554515599|gb|AGY92902.1| hypothetical chloroplast
RF68 (chloroplast) [Aegilops cylindrica]
gi|554515679|gb|AGY92981.1| hypothetical chloroplast
RF68 (chloroplast) [Aegilops geniculata]
gi|699976050|gb|AIU45505.1| hypothetical chloroplast
RF68 (chloroplast) [Triticum turgidum subsp. durum]
gi|699976065|gb|AIU45520.1| hypothetical chloroplast
RF68 (chloroplast) [Triticum turgidum subsp. durum]
Length = 144
Score = 125 bits (313), Expect(2) = 4e-40
Identities = 58/65 (89%), Positives = 60/65 (92%)
Frame = -3
Query: 367 KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPSRKEER 188
K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINR F ILPS +EER
Sbjct: 80 KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRTFLILPSFQEER 139
Query: 187 EIFFP 173
EI FP
Sbjct: 140 EILFP 144
Score = 68.9 bits (167), Expect(2) = 4e-40
Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Frame = -1
Query: 531 GEIQCRSN----FLFTRGIRAVREGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK 364
G IQ RS+ F G GPPRLLSSRESIHPLSVYG+LSLEHR RF LNGK++
Sbjct: 23 GAIQVRSHVDLTFYSLVGSGRSGGGPPRLLSSRESIHPLSVYGELSLEHRLRFVLNGKME 82
Query: 363 RST 355
T
Sbjct: 83 HLT 85
>ref|YP_009003874.1| hypothetical chloroplast RF68 [Deschampsia antarctica]
gi|589229881|ref|YP_009003888.1| hypothetical
chloroplast RF68 [Deschampsia antarctica]
gi|582041379|gb|AHI43089.1| hypothetical chloroplast
RF68 [Deschampsia antarctica]
gi|582041393|gb|AHI43103.1| hypothetical chloroplast
RF68 [Deschampsia antarctica]
Length = 144
Score = 122 bits (307), Expect(2) = 3e-39
Identities = 57/65 (87%), Positives = 59/65 (90%)
Frame = -3
Query: 367 KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPSRKEER 188
K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINR F ILP +EER
Sbjct: 80 KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRTFLILPYFQEER 139
Query: 187 EIFFP 173
EI FP
Sbjct: 140 EILFP 144
Score = 68.6 bits (166), Expect(2) = 3e-39
Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Frame = -1
Query: 531 GEIQCRSN----FLFTRGIRAVREGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK 364
G IQ RS+ F G EGPP LLSSRESIHPLSVYG+LSLEHR RF LNGK++
Sbjct: 23 GAIQVRSHVDLTFYSLVGSGRSGEGPPWLLSSRESIHPLSVYGELSLEHRLRFVLNGKME 82
Query: 363 RST 355
T
Sbjct: 83 HLT 85
>ref|YP_009144385.1| hypothetical chloroplast RF68 (plastid) [Carex siderosticta]
gi|836643325|ref|YP_009144368.1| hypothetical
chloroplast RF68 (plastid) [Carex siderosticta]
gi|825715705|gb|AKJ25346.1| hypothetical chloroplast
RF68 (plastid) [Carex siderosticta]
gi|825715724|gb|AKJ25365.1| hypothetical chloroplast
RF68 (plastid) [Carex siderosticta]
Length = 114
Score = 105 bits (262), Expect(3) = 6e-38
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = -1
Query: 534 SGEIQCRSNFLFTRGIRAVREGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST 355
+GEIQCRSNFLFTRGIRAVR GPPRLLSSRESIHPLSVY QLSLEHR +FGLNGK++ T
Sbjct: 14 NGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYEQLSLEHRHKFGLNGKMEHLT 73
Score = 71.6 bits (174), Expect(3) = 6e-38
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = -3
Query: 367 KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGG 248
K EHLTT+LHRPRTTRSPL FWGDGGIV FEPFF F G
Sbjct: 68 KMEHLTTHLHRPRTTRSPLLFWGDGGIVLFEPFFSCFSRG 107
Score = 30.4 bits (67), Expect(3) = 6e-38
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2
Query: 272 FFSCFSRRSGESCNQ 228
FFSCFSR SGES NQ
Sbjct: 100 FFSCFSRGSGESSNQ 114
>ref|YP_009128439.1| hypothetical chloroplast RF68 (chloroplast) [Ipomoea batatas]
gi|772657623|ref|YP_009128458.1| hypothetical
chloroplast RF68 (chloroplast) [Ipomoea batatas]
gi|760173578|gb|AJP09611.1| hypothetical chloroplast
RF68 (chloroplast) [Ipomoea batatas]
gi|760173597|gb|AJP09630.1| hypothetical chloroplast
RF68 (chloroplast) [Ipomoea batatas]
Length = 116
Score = 132 bits (331), Expect(3) = 3e-37
Identities = 63/81 (77%), Positives = 65/81 (80%)
Frame = -3
Query: 499 HSWDXXXXXXXXXXPLFSRIHTSLISIWTAISRAQV*VRPQWENKTEHLTTYLHRPRTTR 320
HSWD PLFSRIHTSLIS+WTAISRAQV VRPQWE K EHLTT+LHRPRTTR
Sbjct: 26 HSWDPGGPGGTTTAPLFSRIHTSLISVWTAISRAQVEVRPQWEKKMEHLTTHLHRPRTTR 85
Query: 319 SPLSFWGDGGIVPFEPFFHAF 257
S LSFWGDGGIVPFEPFF F
Sbjct: 86 STLSFWGDGGIVPFEPFFSCF 106
Score = 37.0 bits (84), Expect(3) = 3e-37
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 272 FFSCFSRRSGESCNQ 228
FFSCFSRRSGESCNQ
Sbjct: 102 FFSCFSRRSGESCNQ 116
Score = 36.2 bits (82), Expect(3) = 3e-37
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -2
Query: 554 RRIDGAIQVRSNVDPTF 504
RRIDGAI+VRSNVDPTF
Sbjct: 8 RRIDGAIRVRSNVDPTF 24
>gb|AGZ19190.1| hypothetical chloroplast RF68 (chloroplast) [Camellia sinensis]
Length = 98
Score = 159 bits (402), Expect = 4e-36
Identities = 77/83 (92%), Positives = 78/83 (93%), Gaps = 1/83 (1%)
Frame = -3
Query: 370 NKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFF-HAFPGGLEKAAINRIFQILPSRKE 194
NK EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFF HAFPGGLEKAAINRI ILPSRKE
Sbjct: 14 NKMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFFHAFPGGLEKAAINRISLILPSRKE 73
Query: 193 EREIFFPFRRDQEIGSSRKKNAW 125
EREI FPFRRDQEIGSSRKKNAW
Sbjct: 74 EREILFPFRRDQEIGSSRKKNAW 96
>gb|AIA24200.1| hypothetical chloroplast RF68 (plastid) [Indocalamus sinicus]
Length = 134
Score = 108 bits (270), Expect(2) = 4e-35
Identities = 50/55 (90%), Positives = 51/55 (92%)
Frame = -3
Query: 367 KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPS 203
K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINR ILPS
Sbjct: 80 KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRTSLILPS 134
Score = 68.9 bits (167), Expect(2) = 4e-35
Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Frame = -1
Query: 531 GEIQCRSN----FLFTRGIRAVREGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK 364
G IQ RS+ F G GPPRLLSSRESIHPLSVYG+LSLEHR RF LNGK++
Sbjct: 23 GAIQVRSHVDLTFYSLVGSGRSGGGPPRLLSSRESIHPLSVYGELSLEHRLRFVLNGKME 82
Query: 363 RST 355
T
Sbjct: 83 HLT 85
>ref|YP_004733623.1| hypothetical chloroplast RF68 (chloroplast) [Phyllostachys edulis]
gi|340034082|ref|YP_004733636.1| hypothetical
chloroplast RF68 (chloroplast) [Phyllostachys edulis]
gi|340034428|ref|YP_004734023.1| hypothetical
chloroplast RF68 (chloroplast) [Phyllostachys nigra var.
henonis] gi|340034429|ref|YP_004734036.1| hypothetical
chloroplast RF68 (chloroplast) [Phyllostachys nigra var.
henonis] gi|340034495|ref|YP_004734146.1| hypothetical
chloroplast RF68 (chloroplast) [Bambusa emeiensis]
gi|340034507|ref|YP_004734159.1| hypothetical
chloroplast RF68 (chloroplast) [Bambusa emeiensis]
gi|671743743|ref|YP_009051296.1| hypothetical
chloroplast RF68 (chloroplast) [Bambusa multiplex]
gi|671743756|ref|YP_009051309.1| hypothetical
chloroplast RF68 (chloroplast) [Bambusa multiplex]
gi|671743829|ref|YP_009051381.1| hypothetical
chloroplast RF68 (chloroplast) [Phyllostachys sulphurea]
gi|671743842|ref|YP_009051394.1| hypothetical
chloroplast RF68 (chloroplast) [Phyllostachys sulphurea]
gi|675154108|ref|YP_009052629.1| hypothetical
chloroplast RF68 (chloroplast) [Arundinaria fargesii]
gi|675154191|ref|YP_009052712.1| hypothetical
chloroplast RF68 (chloroplast) [Sarocalamus faberi]
gi|675154210|ref|YP_009052725.1| hypothetical
chloroplast RF68 (chloroplast) [Sarocalamus faberi]
gi|675154360|ref|YP_009052878.1| hypothetical
chloroplast RF68 (chloroplast) [Fargesia nitida]
gi|675154444|ref|YP_009052961.1| hypothetical
chloroplast RF68 (chloroplast) [Fargesia spathacea]
gi|675154528|ref|YP_009053044.1| hypothetical
chloroplast RF68 (chloroplast) [Fargesia yunnanensis]
gi|675154612|ref|YP_009053127.1| hypothetical
chloroplast RF68 (chloroplast) [Gaoligongshania
megalothyrsa] gi|675154696|ref|YP_009053210.1|
hypothetical chloroplast RF68 (chloroplast)
[Gelidocalamus tessellatus]
gi|675154780|ref|YP_009053293.1| hypothetical
chloroplast RF68 (chloroplast) [Indocalamus wilsonii]
gi|675155030|ref|YP_009053705.1| hypothetical
chloroplast RF68 (chloroplast) [Yushania levigata]
gi|675155471|ref|YP_009053622.1| hypothetical
chloroplast RF68 (chloroplast) [Thamnocalamus
spathiflorus] gi|675155555|ref|YP_009053924.1|
hypothetical chloroplast RF68 (plastid) [Ampelocalamus
calcareus] gi|817525726|ref|YP_009135738.1| Ycf68
(plastid) [Buergersiochloa bambusoides]
gi|817525737|ref|YP_009135749.1| Ycf68 (plastid)
[Buergersiochloa bambusoides]
gi|885000198|ref|YP_009157947.1| hypothetical
chloroplast RF68 (plastid) [Chusquea circinata]
gi|885000211|ref|YP_009157960.1| hypothetical
chloroplast RF68 (plastid) [Chusquea circinata]
gi|307133949|gb|ADN32954.1| hypothetical chloroplast
RF68 (chloroplast) [Phyllostachys nigra var. henonis]
gi|307133950|gb|ADN32955.1| hypothetical chloroplast
RF68 (chloroplast) [Phyllostachys nigra var. henonis]
gi|309321912|gb|ADO65434.1| hypothetical chloroplast
RF68 (chloroplast) [Phyllostachys edulis]
gi|309321924|gb|ADO65446.1| hypothetical chloroplast
RF68 (chloroplast) [Phyllostachys edulis]
gi|309321998|gb|ADO65519.1| hypothetical chloroplast
RF68 (chloroplast) [Bambusa emeiensis]
gi|309322010|gb|ADO65531.1| hypothetical chloroplast
RF68 (chloroplast) [Bambusa emeiensis]
gi|407030127|gb|AFS67110.1| hypothetical chloroplast
RF68 (chloroplast) [Arundinaria fargesii]
gi|407030210|gb|AFS67192.1| hypothetical chloroplast
RF68 (chloroplast) [Sarocalamus faberi]
gi|407030229|gb|AFS67211.1| hypothetical chloroplast
RF68 (chloroplast) [Sarocalamus faberi]
gi|407030379|gb|AFS67359.1| hypothetical chloroplast
RF68 (chloroplast) [Fargesia nitida]
gi|407030463|gb|AFS67442.1| hypothetical chloroplast
RF68 (chloroplast) [Fargesia spathacea]
gi|407030547|gb|AFS67525.1| hypothetical chloroplast
RF68 (chloroplast) [Fargesia yunnanensis]
gi|407030631|gb|AFS67608.1| hypothetical chloroplast
RF68 (chloroplast) [Gaoligongshania megalothyrsa]
gi|407030715|gb|AFS67691.1| hypothetical chloroplast
RF68 (chloroplast) [Gelidocalamus tessellatus]
gi|407030799|gb|AFS67774.1| hypothetical chloroplast
RF68 (chloroplast) [Indocalamus wilsonii]
gi|407031132|gb|AFS68103.1| hypothetical chloroplast
RF68 (chloroplast) [Thamnocalamus spathiflorus]
gi|407031216|gb|AFS68186.1| hypothetical chloroplast
RF68 (chloroplast) [Yushania levigata]
gi|629514495|gb|AHY86226.1| hypothetical chloroplast
RF68 (plastid) [Ampelocalamus calcareus]
gi|638920243|gb|AIA24259.1| hypothetical chloroplast
RF68 (plastid) [Oldeania alpina]
gi|668349661|gb|AIH00282.1| hypothetical chloroplast
RF68 (chloroplast) [Bambusa multiplex]
gi|668349674|gb|AIH00295.1| hypothetical chloroplast
RF68 (chloroplast) [Bambusa multiplex]
gi|668349747|gb|AIH00367.1| hypothetical chloroplast
RF68 (chloroplast) [Phyllostachys sulphurea]
gi|668349760|gb|AIH00380.1| hypothetical chloroplast
RF68 (chloroplast) [Phyllostachys sulphurea]
gi|684184728|gb|AIM53914.1| Ycf68 (plastid)
[Buergersiochloa bambusoides]
gi|684184739|gb|AIM53925.1| Ycf68 (plastid)
[Buergersiochloa bambusoides]
gi|821158547|gb|AKH04476.1| hypothetical chloroplast
RF68 (plastid) [Chusquea circinata]
gi|821158560|gb|AKH04489.1| hypothetical chloroplast
RF68 (plastid) [Chusquea circinata]
gi|821158632|gb|AKH04560.1| hypothetical chloroplast
RF68 (plastid) [Chusquea sp. PFM-2015]
gi|821158645|gb|AKH04573.1| hypothetical chloroplast
RF68 (plastid) [Chusquea sp. PFM-2015]
gi|821158717|gb|AKH04644.1| hypothetical chloroplast
RF68 (plastid) [Otatea glauca]
gi|821158730|gb|AKH04657.1| hypothetical chloroplast
RF68 (plastid) [Otatea glauca]
Length = 134
Score = 108 bits (270), Expect(2) = 4e-35
Identities = 50/55 (90%), Positives = 51/55 (92%)
Frame = -3
Query: 367 KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPS 203
K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINR ILPS
Sbjct: 80 KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRTSLILPS 134
Score = 68.9 bits (167), Expect(2) = 4e-35
Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Frame = -1
Query: 531 GEIQCRSN----FLFTRGIRAVREGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK 364
G IQ RS+ F G GPPRLLSSRESIHPLSVYG+LSLEHR RF LNGK++
Sbjct: 23 GAIQVRSHVDLTFYSLVGSGRSGGGPPRLLSSRESIHPLSVYGELSLEHRLRFVLNGKME 82
Query: 363 RST 355
T
Sbjct: 83 HLT 85
>ref|YP_009034225.1| hypothetical chloroplast RF68 (plastid) [Digitaria exilis]
gi|634743588|gb|AHZ60838.1| hypothetical chloroplast
RF68 (plastid) [Digitaria exilis]
Length = 135
Score = 107 bits (266), Expect(2) = 8e-35
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = -3
Query: 367 KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPS 203
K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKA INR ILPS
Sbjct: 81 KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAVINRTSLILPS 135
Score = 69.3 bits (168), Expect(2) = 8e-35
Identities = 38/64 (59%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Frame = -1
Query: 531 GEIQCRSN-----FLFTRGIRAVREGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKI 367
G IQ RS+ + R+ GPPRLLSSRESIHPLSVYG+LSLEHR RF LNGK+
Sbjct: 23 GAIQVRSHVDLTFYSLVGSGRSXGGGPPRLLSSRESIHPLSVYGELSLEHRLRFVLNGKM 82
Query: 366 KRST 355
+ T
Sbjct: 83 EHLT 86
>ref|YP_024330.1| hypothetical protein 133 [Saccharum hybrid cultivar SP-80-3280]
gi|48478742|ref|YP_024349.1| hypothetical protein 133
[Saccharum hybrid cultivar SP-80-3280]
gi|50812586|ref|YP_054687.1| hypothetical protein
SaofCp081 (chloroplast) [Saccharum hybrid cultivar NCo
310] gi|50812605|ref|YP_054706.1| hypothetical protein
SaofCp100 (chloroplast) [Saccharum hybrid cultivar NCo
310] gi|94502706|ref|YP_588376.1| hypothetical protein
ZeamMp116 (mitochondrion) [Zea mays subsp. mays]
gi|75121186|sp|Q6ENQ5.1|YCF68_SACOF RecName:
Full=Uncharacterized protein ycf68; AltName: Full=ORF
134 gi|75126323|sp|Q6L3C9.1|YCF68_SACHY RecName:
Full=Uncharacterized protein ycf68; AltName: Full=ORF
134 gi|7271125|emb|CAB77704.1| hypothetical protein
(chloroplast) [Zea mays] gi|40795145|gb|AAR91189.1|
hypothetical protein (mitochondrion) [Zea mays]
gi|48478625|gb|AAT44645.1| hypothetical protein 133
(chloroplast) [Saccharum hybrid cultivar SP80-3280]
gi|48478644|gb|AAT44664.1| hypothetical protein 133
(chloroplast) [Saccharum hybrid cultivar SP80-3280]
gi|49659570|dbj|BAD27351.1| hypothetical protein
(chloroplast) [Saccharum hybrid cultivar NCo 310]
gi|49659589|dbj|BAD27370.1| hypothetical protein
(chloroplast) [Saccharum hybrid cultivar NCo 310]
gi|540067347|gb|AGV02701.1| hypothetical protein
(chloroplast) [Zea mays subsp. mays]
gi|540067360|gb|AGV02714.1| hypothetical protein
(chloroplast) [Zea mays subsp. mays]
gi|540067432|gb|AGV02785.1| hypothetical protein
(chloroplast) [Zea mays subsp. mays]
gi|540067445|gb|AGV02798.1| hypothetical protein
(chloroplast) [Zea mays subsp. mays]
gi|893640964|gb|AKQ78159.1| hypothetical protein
(chloroplast) [Zea mays subsp. mays]
gi|893640977|gb|AKQ78172.1| hypothetical protein
(chloroplast) [Zea mays subsp. mays]
gi|893641049|gb|AKQ78243.1| hypothetical protein
(chloroplast) [Zea mays subsp. mays]
gi|893641062|gb|AKQ78256.1| hypothetical protein
(chloroplast) [Zea mays subsp. mays]
gi|893641134|gb|AKQ78327.1| hypothetical protein
(chloroplast) [Zea mays subsp. mays]
gi|893641147|gb|AKQ78340.1| hypothetical protein
(chloroplast) [Zea mays subsp. mays]
gi|893641219|gb|AKQ78411.1| hypothetical protein
(chloroplast) [Zea mays subsp. mays]
gi|893641232|gb|AKQ78424.1| hypothetical protein
(chloroplast) [Zea mays subsp. mays]
Length = 134
Score = 107 bits (266), Expect(2) = 1e-34
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = -3
Query: 367 KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPS 203
K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKA INR ILPS
Sbjct: 80 KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAVINRTSLILPS 134
Score = 68.9 bits (167), Expect(2) = 1e-34
Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Frame = -1
Query: 531 GEIQCRSN----FLFTRGIRAVREGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK 364
G IQ RS+ F G GPPRLLSSRESIHPLSVYG+LSLEHR RF LNGK++
Sbjct: 23 GAIQVRSHVDRTFYSLVGSGRSGGGPPRLLSSRESIHPLSVYGELSLEHRLRFVLNGKME 82
Query: 363 RST 355
T
Sbjct: 83 HLT 85
>gb|ACI43247.1| unknown (chloroplast) [Coix lacryma-jobi]
gi|209361337|gb|ACI43252.1| unknown (chloroplast) [Coix
lacryma-jobi]
Length = 134
Score = 107 bits (266), Expect(2) = 1e-34
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = -3
Query: 367 KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPS 203
K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKA INR ILPS
Sbjct: 80 KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAVINRTSLILPS 134
Score = 68.9 bits (167), Expect(2) = 1e-34
Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Frame = -1
Query: 531 GEIQCRSN----FLFTRGIRAVREGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK 364
G IQ RS+ F G GPPRLLSSRESIHPLSVYG+LSLEHR RF LNGK++
Sbjct: 23 GAIQVRSHVDRTFYSLVGSGRSGGGPPRLLSSRESIHPLSVYGELSLEHRLRFVLNGKME 82
Query: 363 RST 355
T
Sbjct: 83 HLT 85
>ref|YP_004841994.1| hypothetical chloroplast RF68 (chloroplast) [Panicum virgatum]
gi|345895276|ref|YP_004842007.1| hypothetical
chloroplast RF68 (chloroplast) [Panicum virgatum]
gi|649132409|ref|YP_009034015.1| hypothetical
chloroplast RF68 (plastid) [Cenchrus americanus]
gi|649132425|ref|YP_009034031.1| hypothetical
chloroplast RF68 (plastid) [Cenchrus americanus]
gi|694136812|ref|YP_009072719.1| hypothetical
chloroplast RF68 (plastid) [Centotheca lappacea]
gi|694136825|ref|YP_009072732.1| hypothetical
chloroplast RF68 (plastid) [Centotheca lappacea]
gi|694136984|ref|YP_009072889.1| hypothetical
chloroplast RF68 (plastid) [Coleataenia prionitis]
gi|694136997|ref|YP_009072902.1| hypothetical
chloroplast RF68 (plastid) [Coleataenia prionitis]
gi|695099295|ref|YP_009072286.1| hypothetical
chloroplast RF68 (chloroplast) [Echinochloa oryzicola]
gi|695099308|ref|YP_009072299.1| hypothetical
chloroplast RF68 (chloroplast) [Echinochloa oryzicola]
gi|938340175|ref|YP_009172185.1| hypothetical
chloroplast RF68 (chloroplast) [Setaria viridis]
gi|938340188|ref|YP_009172198.1| hypothetical
chloroplast RF68 (chloroplast) [Setaria viridis]
gi|319412365|gb|ADV41901.1| hypothetical chloroplast
RF68 (chloroplast) [Panicum virgatum]
gi|319412378|gb|ADV41914.1| hypothetical chloroplast
RF68 (chloroplast) [Panicum virgatum]
gi|319412451|gb|ADV41986.1| hypothetical chloroplast
RF68 (chloroplast) [Panicum virgatum]
gi|319412464|gb|ADV41999.1| hypothetical chloroplast
RF68 (chloroplast) [Panicum virgatum]
gi|591289908|gb|AHL29594.1| hypothetical chloroplast
RF68 (chloroplast) [Echinochloa crus-galli var.
crus-galli] gi|591289924|gb|AHL29610.1| hypothetical
chloroplast RF68 (chloroplast) [Echinochloa crus-galli
var. crus-galli] gi|591289995|gb|AHL29680.1|
hypothetical chloroplast RF68 (chloroplast) [Echinochloa
oryzicola] gi|591290009|gb|AHL29694.1| hypothetical
chloroplast RF68 (chloroplast) [Echinochloa oryzicola]
gi|631793362|gb|AHZ18261.1| hypothetical chloroplast
RF68 (plastid) [Cenchrus americanus]
gi|631793378|gb|AHZ18277.1| hypothetical chloroplast
RF68 (plastid) [Cenchrus americanus]
gi|686985638|gb|AIQ79161.1| hypothetical chloroplast
RF68 (plastid) [Centotheca lappacea]
gi|686985651|gb|AIQ79174.1| hypothetical chloroplast
RF68 (plastid) [Centotheca lappacea]
gi|686985896|gb|AIQ79416.1| hypothetical chloroplast
RF68 (plastid) [Coleataenia prionitis]
gi|686985909|gb|AIQ79429.1| hypothetical chloroplast
RF68 (plastid) [Coleataenia prionitis]
gi|929982885|gb|ALF36137.1| hypothetical chloroplast
RF68 (chloroplast) [Setaria viridis]
gi|929982898|gb|ALF36150.1| hypothetical chloroplast
RF68 (chloroplast) [Setaria viridis]
Length = 134
Score = 107 bits (266), Expect(2) = 1e-34
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = -3
Query: 367 KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPS 203
K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKA INR ILPS
Sbjct: 80 KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAVINRTSLILPS 134
Score = 68.9 bits (167), Expect(2) = 1e-34
Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Frame = -1
Query: 531 GEIQCRSN----FLFTRGIRAVREGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK 364
G IQ RS+ F G GPPRLLSSRESIHPLSVYG+LSLEHR RF LNGK++
Sbjct: 23 GAIQVRSHVDLTFYSLVGSGRSGGGPPRLLSSRESIHPLSVYGELSLEHRLRFVLNGKME 82
Query: 363 RST 355
T
Sbjct: 83 HLT 85
>ref|YP_004734230.1| hypothetical chloroplast RF68 (plastid) [Ferrocalamus
rimosivaginus] gi|340034594|ref|YP_004734243.1|
hypothetical chloroplast RF68 (plastid) [Ferrocalamus
rimosivaginus] gi|309321746|gb|ADO65270.1| hypothetical
chloroplast RF68 (plastid) [Ferrocalamus rimosivaginus]
gi|309321759|gb|ADO65283.1| hypothetical chloroplast
RF68 (plastid) [Ferrocalamus rimosivaginus]
Length = 134
Score = 106 bits (264), Expect(2) = 2e-34
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = -3
Query: 367 KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPS 203
K EHLTT+LHRPRTTRSPL FWGDGGIVPFEPFFHAFPGGLEKAAINR ILPS
Sbjct: 80 KMEHLTTHLHRPRTTRSPLLFWGDGGIVPFEPFFHAFPGGLEKAAINRTSLILPS 134
Score = 68.9 bits (167), Expect(2) = 2e-34
Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Frame = -1
Query: 531 GEIQCRSN----FLFTRGIRAVREGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK 364
G IQ RS+ F G GPPRLLSSRESIHPLSVYG+LSLEHR RF LNGK++
Sbjct: 23 GAIQVRSHVDLTFYSLVGSGRSGGGPPRLLSSRESIHPLSVYGELSLEHRLRFVLNGKME 82
Query: 363 RST 355
T
Sbjct: 83 HLT 85
>emb|CAF28642.1| ycf68 [Nymphaea alba] gi|50250389|emb|CAF28655.1| ycf68 [Nymphaea
alba]
Length = 101
Score = 138 bits (347), Expect(2) = 2e-34
Identities = 69/83 (83%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
Frame = -3
Query: 367 KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPS--RKE 194
K EHLTT+LHRPRTTRSP + GDGGIVPFEPFFHAFPGGLEKAAINRI I PS RKE
Sbjct: 17 KMEHLTTHLHRPRTTRSPQNERGDGGIVPFEPFFHAFPGGLEKAAINRISLIFPSRKRKE 76
Query: 193 EREIFFPFRRDQEIGSSRKKNAW 125
EREI FPFR DQEIGSS KKNAW
Sbjct: 77 EREILFPFRGDQEIGSSHKKNAW 99
Score = 36.6 bits (83), Expect(2) = 2e-34
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -2
Query: 419 MDSYLSSTGLGSASMGK 369
MDSYLSSTGLGSASMGK
Sbjct: 1 MDSYLSSTGLGSASMGK 17
>ref|YP_009034238.1| hypothetical chloroplast RF68 (plastid) [Digitaria exilis]
gi|634743601|gb|AHZ60851.1| hypothetical chloroplast
RF68 (plastid) [Digitaria exilis]
Length = 135
Score = 107 bits (266), Expect(2) = 3e-34
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = -3
Query: 367 KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAAINRIFQILPS 203
K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKA INR ILPS
Sbjct: 81 KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGLEKAVINRTSLILPS 135
Score = 67.4 bits (163), Expect(2) = 3e-34
Identities = 39/64 (60%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Frame = -1
Query: 531 GEIQCRSN--FLFTRGIRAVREG---PPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKI 367
G IQ RS+ F + + R G PPRLLSSRESIHPLSVYG+LSLEHR RF LNGK+
Sbjct: 23 GAIQVRSHVDLTFYSLVGSGRSGGGXPPRLLSSRESIHPLSVYGELSLEHRLRFVLNGKM 82
Query: 366 KRST 355
+ T
Sbjct: 83 EHLT 86