BLASTX nr result
ID: Ziziphus21_contig00015337
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00015337
(300 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 64 3e-08
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 64 3e-08
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 64 3e-08
gb|AFB73912.1| polyprotein [Citrus sinensis] 62 2e-07
ref|XP_006484589.1| PREDICTED: uncharacterized protein LOC102625... 61 3e-07
gb|AFB73911.1| polyprotein [Citrus sinensis] 58 2e-06
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 57 3e-06
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 63.5 bits (153), Expect(2) = 3e-08
Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 51 NRTRSKKNVKCTMV-RKNTTKKESWHLKKNEKVKRKNIESSKIQGCVASISDDDEILYSE 227
+++R KKN+KC K KKE W++KKN + KN E+S QGCVAS SDD EILYSE
Sbjct: 220 SKSRRKKNIKCYGCGMKGHVKKECWNIKKNGE---KNSEASTSQGCVASTSDDGEILYSE 276
Query: 228 ATWLLKAE 251
A K E
Sbjct: 277 AATSSKGE 284
Score = 20.8 bits (42), Expect(2) = 3e-08
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1
Query: 28 LTVTKGRSTE 57
LT+T+GRSTE
Sbjct: 199 LTMTRGRSTE 208
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 63.5 bits (153), Expect(2) = 3e-08
Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 51 NRTRSKKNVKCTMV-RKNTTKKESWHLKKNEKVKRKNIESSKIQGCVASISDDDEILYSE 227
+++R KKN+KC K KKE W++KKN + KN E+S QGCVAS SDD EILYSE
Sbjct: 220 SKSRRKKNIKCYGCGMKGHVKKECWNIKKNGE---KNSEASTSQGCVASTSDDGEILYSE 276
Query: 228 ATWLLKAE 251
A K E
Sbjct: 277 AATSSKGE 284
Score = 20.8 bits (42), Expect(2) = 3e-08
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1
Query: 28 LTVTKGRSTE 57
LT+T+GRSTE
Sbjct: 199 LTMTRGRSTE 208
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 63.5 bits (153), Expect(2) = 3e-08
Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 51 NRTRSKKNVKCTMV-RKNTTKKESWHLKKNEKVKRKNIESSKIQGCVASISDDDEILYSE 227
+++R KKN+KC K KKE W++KKN + KN E+S QGCVAS SDD EILYSE
Sbjct: 220 SKSRRKKNIKCYGCGMKGHVKKECWNIKKNGE---KNSEASTSQGCVASTSDDGEILYSE 276
Query: 228 ATWLLKAE 251
A K E
Sbjct: 277 AATSSKGE 284
Score = 20.8 bits (42), Expect(2) = 3e-08
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1
Query: 28 LTVTKGRSTE 57
LT+T+GRSTE
Sbjct: 199 LTMTRGRSTE 208
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 61.6 bits (148), Expect(2) = 2e-07
Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +3
Query: 51 NRTRSKKNVKC-TMVRKNTTKKESWHLKKNEKVKRKNIESSKIQGCVASISDDDEILYSE 227
+++RSKKNVKC +K KKE W +K + K ESS QGCVAS SDD EILYSE
Sbjct: 220 SKSRSKKNVKCYNCGKKGHVKKECWSNQKRREGKEP--ESSNAQGCVASTSDDGEILYSE 277
Query: 228 AT 233
AT
Sbjct: 278 AT 279
Score = 20.4 bits (41), Expect(2) = 2e-07
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1
Query: 28 LTVTKGRSTE 57
L+VT+GRSTE
Sbjct: 199 LSVTRGRSTE 208
>ref|XP_006484589.1| PREDICTED: uncharacterized protein LOC102625372 [Citrus sinensis]
Length = 1258
Score = 60.8 bits (146), Expect(2) = 3e-07
Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +3
Query: 51 NRTRSKKNVKCTMV-RKNTTKKESWHLKKNEKVKRKNIESSKIQGCVASISDDDEILYSE 227
++ RSKKNVKC +K KKE W +K ++ K ESS QGCVAS SDD EILYSE
Sbjct: 83 SKFRSKKNVKCYKCGKKGHVKKECWSNQKRKEGKEP--ESSNAQGCVASTSDDGEILYSE 140
Query: 228 AT 233
AT
Sbjct: 141 AT 142
Score = 60.8 bits (146), Expect(2) = 3e-07
Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +3
Query: 51 NRTRSKKNVKCTMV-RKNTTKKESWHLKKNEKVKRKNIESSKIQGCVASISDDDEILYSE 227
++ RSKKNVKC +K KKE W +K ++ K ESS QGCVAS SDD EILYSE
Sbjct: 420 SKFRSKKNVKCYKCGKKGHVKKECWSNQKRKEGKEP--ESSNAQGCVASTSDDGEILYSE 477
Query: 228 AT 233
AT
Sbjct: 478 AT 479
Score = 20.4 bits (41), Expect(2) = 3e-07
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1
Query: 28 LTVTKGRSTE 57
L+VT+GRSTE
Sbjct: 62 LSVTRGRSTE 71
Score = 20.4 bits (41), Expect(2) = 3e-07
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1
Query: 28 LTVTKGRSTE 57
L+VT+GRSTE
Sbjct: 399 LSVTRGRSTE 408
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 57.8 bits (138), Expect(2) = 2e-06
Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +3
Query: 51 NRTRSKKNVKC-TMVRKNTTKKESWHLKKNEKVKRKNIESSKIQGCVASISDDDEILYSE 227
++ R KKNVKC +K KKE W +K + K E+S QGCVAS SDD EILYSE
Sbjct: 220 SKFRGKKNVKCYNCGKKGHVKKECWSNQKRREGKEP--ETSNAQGCVASTSDDGEILYSE 277
Query: 228 AT 233
AT
Sbjct: 278 AT 279
Score = 20.4 bits (41), Expect(2) = 2e-06
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1
Query: 28 LTVTKGRSTE 57
L+VT+GRSTE
Sbjct: 199 LSVTRGRSTE 208
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 57.0 bits (136), Expect(2) = 3e-06
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Frame = +3
Query: 51 NRTRSKKNVKCTMV-RKNTTKKESWHLKKNEKVKRKNIESSKIQGCVASISDDDEILYSE 227
+++R K N+KC K KKE W+ KKN + KN E++ QGCVAS SDD EILYSE
Sbjct: 220 SKSRRKNNIKCYGCGMKGHVKKECWNNKKNGE---KNSEATTSQGCVASTSDDGEILYSE 276
Query: 228 A 230
A
Sbjct: 277 A 277
Score = 20.8 bits (42), Expect(2) = 3e-06
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1
Query: 28 LTVTKGRSTE 57
LT+T+GRSTE
Sbjct: 199 LTMTRGRSTE 208