BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00011480
         (4780 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008218745.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...  1975   0.0  
ref|XP_007225464.1| hypothetical protein PRUPE_ppa000230mg [Prun...  1971   0.0  
ref|XP_009353736.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1962   0.0  
ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...  1938   0.0  
ref|XP_004300262.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1934   0.0  
ref|XP_010658001.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...  1931   0.0  
ref|XP_007041294.1| ATP-dependent RNA helicase, putative isoform...  1898   0.0  
ref|XP_012066649.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...  1889   0.0  
ref|XP_006494370.1| PREDICTED: ATP-dependent RNA helicase DHX29-...  1885   0.0  
ref|XP_012467824.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1859   0.0  
gb|KJB16164.1| hypothetical protein B456_002G216000 [Gossypium r...  1853   0.0  
ref|XP_011028322.1| PREDICTED: ATP-dependent RNA helicase Dhx29 ...  1852   0.0  
gb|KJB16163.1| hypothetical protein B456_002G216000 [Gossypium r...  1845   0.0  
ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinu...  1842   0.0  
ref|XP_010065338.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1804   0.0  
ref|XP_009599886.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1772   0.0  
ref|XP_009785200.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1771   0.0  
ref|XP_009599885.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1761   0.0  
ref|XP_004499378.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1758   0.0  
ref|XP_010314576.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1755   0.0  

>ref|XP_008218745.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Prunus mume]
          Length = 1433

 Score = 1975 bits (5117), Expect = 0.0
 Identities = 1033/1461 (70%), Positives = 1158/1461 (79%), Gaps = 7/1461 (0%)
 Frame = -1

Query: 4699 MAPKKKQXXXXXXXXXXXXXXXXXSGPRLQIXXXXXXXXXXXXXXXXXXXXXXXXXLVDE 4520
            MAPKKKQ                  GPRLQI                          VDE
Sbjct: 1    MAPKKKQTSKQNSKPKTTSS-----GPRLQISAENENRVRRLLLNSGRSSTPAAP--VDE 53

Query: 4519 XXXXXXXXXXXXSIYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLK 4340
                        ++YE LSCEGFTNDQIELALSALK GATFEAA+DWLCLNL  NELPLK
Sbjct: 54   SLSKAQKTKKLKAVYEKLSCEGFTNDQIELALSALKEGATFEAAVDWLCLNLTSNELPLK 113

Query: 4339 FXXXXXXXXXXXXSVGVILTAREDWTPSVDQSSTPNEEEPGISIRTKGRWDDETLDSCQS 4160
            F            SVG+ILT+R+DWTPSVD S+  +E+ PGISIRTKG+ DD+TLDS Q 
Sbjct: 114  FSSGTSLHGNEGGSVGIILTSRDDWTPSVDASTKIDEDAPGISIRTKGQRDDKTLDSFQP 173

Query: 4159 SQADWIKRYVEQEEEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVKAKE 3980
            SQADWIK+YVEQ+EEDE STTWED   DE + +K+ +PRSYDVIA+EYR AR EA  AK+
Sbjct: 174  SQADWIKQYVEQQEEDE-STTWEDDAADERA-EKVLKPRSYDVIAKEYRAARWEAANAKQ 231

Query: 3979 RGDKKSQEQAGHIIRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSEA 3800
            +GDKKSQE+AG IIR +KQELSALGLS+DILASEF  +    TA E T  +   H     
Sbjct: 232  KGDKKSQERAGSIIRNLKQELSALGLSDDILASEFGKD----TAFEDTYTNPYKHSEE-- 285

Query: 3799 KECSIVEGGLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVEL 3620
                         +HA+E T+     E+       V  T S    + KI AEE+SIDVE+
Sbjct: 286  -------------VHADEITVDRIDEEHCSSIHFPVNSTLSSEPAQGKIIAEEESIDVEI 332

Query: 3619 GNFFLEDGPSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLC 3440
            GNFFLEDGPS E L P+V ELQ++E+MRE+SSEKNLEKL+GIW+KGD  KIPKA LHQLC
Sbjct: 333  GNFFLEDGPSGEVLPPEVLELQKRERMREISSEKNLEKLDGIWKKGDSRKIPKAVLHQLC 392

Query: 3439 QKSGWEAPXXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDA 3260
            Q+SGWEAP             YTVSVLR+ASGRGKSRKAGGL TLQLP+ + T +SAEDA
Sbjct: 393  QRSGWEAPKFNKVRGKENNFSYTVSVLRKASGRGKSRKAGGLVTLQLPDQNGTFDSAEDA 452

Query: 3259 QNKVAAFALYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGA 3080
            QN+VAAFAL  LFPDLPVHLLI EPYASLV+QWK            EDRRA+FVDSLL A
Sbjct: 453  QNRVAAFALCQLFPDLPVHLLIIEPYASLVIQWKEGESSTTVEDSQEDRRATFVDSLLSA 512

Query: 3079 DGSNATSSADVMNNIISEEFQQIHYEENENSAVAE-------VHNHKEGESSYLRQEQEN 2921
            DGS +TS+A+ M +I+ EE Q++H EE  +S V         VH+ KE ESSYLRQE EN
Sbjct: 513  DGSASTSAANFMYDILPEEVQELHVEEPISSGVVRTDPIAQRVHHFKEVESSYLRQELEN 572

Query: 2920 KMKMQKYKDMLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVE 2741
            K+K  K+KDMLKTRAALPIA LK DIL LL ENNVLVVCGETGSGKTTQVPQFILDDM++
Sbjct: 573  KLKNPKFKDMLKTRAALPIAGLKGDILRLLHENNVLVVCGETGSGKTTQVPQFILDDMIK 632

Query: 2740 SGLGGHCNIICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLF 2561
            SG GGHCNIICTQPRRIAAISVAERV+DERCEPSPGS GSLVGYQVRLD A NDKTKLLF
Sbjct: 633  SGRGGHCNIICTQPRRIAAISVAERVSDERCEPSPGSRGSLVGYQVRLDCASNDKTKLLF 692

Query: 2560 CTTGILLRKIAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVIL 2381
            CTTGILLRK+ GD+NLTG+THVIVDEVHERSLLGDFLLIVLKNL+EKQS  +TPKLKVIL
Sbjct: 693  CTTGILLRKLMGDKNLTGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSALSTPKLKVIL 752

Query: 2380 MSATVDSHLFSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTK 2201
            MSATVDS LFS+YF NCPVITA+GRTHPVTTY++ED+YESI+YR+ASDS ASL +   TK
Sbjct: 753  MSATVDSDLFSRYFGNCPVITAEGRTHPVTTYYLEDIYESIDYRIASDSPASLGYGPLTK 812

Query: 2200 DKSSAVNNRRGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVID 2021
            +K+ AVNNRRGKKNLVLSAWGDDS+LSEE INPYYVPD+YQSY EQTRQNLK++NEDVID
Sbjct: 813  EKAGAVNNRRGKKNLVLSAWGDDSLLSEENINPYYVPDSYQSYKEQTRQNLKRLNEDVID 872

Query: 2020 YDLLEDLVCYVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVAS 1841
            YDLLEDLVC+VDETC EGAILVFLPGVSEIY LVDKL ASYRFGG ++DWILPLHSSV+S
Sbjct: 873  YDLLEDLVCHVDETCDEGAILVFLPGVSEIYTLVDKLAASYRFGGQASDWILPLHSSVSS 932

Query: 1840 SDQKKVFLRPPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDW 1661
            +DQKKVFLR P+NIRKVI+ATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDW
Sbjct: 933  TDQKKVFLRAPENIRKVIVATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDW 992

Query: 1660 ISXXXXXXXXXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLG 1481
            IS            RVKPGIC+ LYTR+RFE+LMRPFQVPEMLRMPLVELCLQIKLLSLG
Sbjct: 993  ISKANARQRRGRAGRVKPGICFCLYTRYRFEQLMRPFQVPEMLRMPLVELCLQIKLLSLG 1052

Query: 1480 HIKPFLSKALEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYG 1301
            +IKP LSKALEPPREEAM +AI +LYEVGALE DE LTPLG+HLAKLPVDVLIGKMMLYG
Sbjct: 1053 YIKPLLSKALEPPREEAMTTAIKLLYEVGALEADEELTPLGHHLAKLPVDVLIGKMMLYG 1112

Query: 1300 GIFGCLSPILSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHL 1121
            GIFGCLSPILSISAFLSYKSPF+YPKDERQNVER          DG  +S+D  RQSDHL
Sbjct: 1113 GIFGCLSPILSISAFLSYKSPFVYPKDERQNVERAKLALLTGKLDGPSESHDSDRQSDHL 1172

Query: 1120 LMMIAYKKWEKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKT 941
            +MM AY+KWEKI+REKG+KAAQHFCNSYFLSSSVM MIRDMR+QFGTLLADIGLI LPK 
Sbjct: 1173 IMMTAYQKWEKILREKGVKAAQHFCNSYFLSSSVMYMIRDMRIQFGTLLADIGLIALPKQ 1232

Query: 940  YQIDRRKRENLDCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLK 761
            YQ+  RK+ENLD W SD SQPFN Y+ H+SI+KAILCAGLYPN+AAT KGIAE  L  LK
Sbjct: 1233 YQVGGRKKENLDTWFSDESQPFNMYSTHSSIVKAILCAGLYPNIAATGKGIAEATLTNLK 1292

Query: 760  QSTGLASKGHQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSP 581
            QS   A+K   +WYDGRREV+IHPSSINS+LKEF++PF+VFLEKVETNKVFLRDTT++SP
Sbjct: 1293 QSASPATKERPIWYDGRREVNIHPSSINSTLKEFQYPFIVFLEKVETNKVFLRDTTVISP 1352

Query: 580  YSILLFGGFINVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAXX 401
             SILLFGG IN+ HQTG+V +DGWLKL+APAQTAVLFKELRLTLHS+L+ELIRKPE++  
Sbjct: 1353 NSILLFGGSINIQHQTGLVIVDGWLKLTAPAQTAVLFKELRLTLHSVLKELIRKPENS-- 1410

Query: 400  XXXXXXXXXSIIHLLLEEDKP 338
                     SIIHLLLEEDKP
Sbjct: 1411 TVAYNEVLRSIIHLLLEEDKP 1431


>ref|XP_007225464.1| hypothetical protein PRUPE_ppa000230mg [Prunus persica]
            gi|462422400|gb|EMJ26663.1| hypothetical protein
            PRUPE_ppa000230mg [Prunus persica]
          Length = 1426

 Score = 1971 bits (5107), Expect = 0.0
 Identities = 1033/1461 (70%), Positives = 1154/1461 (78%), Gaps = 7/1461 (0%)
 Frame = -1

Query: 4699 MAPKKKQXXXXXXXXXXXXXXXXXSGPRLQIXXXXXXXXXXXXXXXXXXXXXXXXXLVDE 4520
            MAPKKKQ                  GPRLQI                          VDE
Sbjct: 1    MAPKKKQTSKQNSKPKTTSS-----GPRLQISAENENRVRRLLLNSGRSSTPAAP--VDE 53

Query: 4519 XXXXXXXXXXXXSIYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLK 4340
                        ++YE LSCEGFTNDQIELALSALK GATFEAA+DWLCLNL  NELPLK
Sbjct: 54   SLSKAQKTKKLKAVYEKLSCEGFTNDQIELALSALKEGATFEAAVDWLCLNLTSNELPLK 113

Query: 4339 FXXXXXXXXXXXXSVGVILTAREDWTPSVDQSSTPNEEEPGISIRTKGRWDDETLDSCQS 4160
            F            SVG+ILT+R+DWTPSVD S+  +E+ PGISIRTKG+ DD+TLDS Q 
Sbjct: 114  FSSGTSLHGNEGGSVGIILTSRDDWTPSVDTSTKIDEDAPGISIRTKGQRDDKTLDSFQP 173

Query: 4159 SQADWIKRYVEQEEEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVKAKE 3980
            SQADWIK+YVEQ+EEDE STTWED  V +        PRSYDVIA+EYR AR EA  AK+
Sbjct: 174  SQADWIKQYVEQQEEDE-STTWEDDAVHK--------PRSYDVIAKEYRAARWEAANAKQ 224

Query: 3979 RGDKKSQEQAGHIIRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSEA 3800
            +GDKKSQE+AG IIR +KQELSALGLS+DILASEF  +    TA E T  +   H     
Sbjct: 225  KGDKKSQERAGCIIRNLKQELSALGLSDDILASEFGKD----TAFEDTYTNPYKHSEE-- 278

Query: 3799 KECSIVEGGLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVEL 3620
                         +HA+E T+     E+       V  T S    + KI AEE+SIDVE+
Sbjct: 279  -------------VHADEITVDRIDEEHCSSIHFPVNSTLSSELAQGKIIAEEESIDVEI 325

Query: 3619 GNFFLEDGPSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLC 3440
            GNFFLEDGPS E L P+V ELQ++E+MRE+SSEKNLEKL+GIW+KGD  KIPKA LHQLC
Sbjct: 326  GNFFLEDGPSGEVLPPEVLELQKRERMREISSEKNLEKLDGIWKKGDSRKIPKAVLHQLC 385

Query: 3439 QKSGWEAPXXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDA 3260
            Q+SGWEAP             YTVSVLR+ASGRGKSRKAGGL TLQLP+ + T +SAEDA
Sbjct: 386  QRSGWEAPKFNKVRGKENNFSYTVSVLRKASGRGKSRKAGGLVTLQLPDQNGTFDSAEDA 445

Query: 3259 QNKVAAFALYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGA 3080
            QN+VAAFAL  LFPDLPVHLLI EPYASLV+QWK            EDRRA+FVDSLL A
Sbjct: 446  QNRVAAFALCQLFPDLPVHLLIIEPYASLVIQWKEGESSTTVEDSQEDRRATFVDSLLSA 505

Query: 3079 DGSNATSSADVMNNIISEEFQQIHYEENENSAVAE-------VHNHKEGESSYLRQEQEN 2921
            DGS +TS+A+ M +I+ EE Q++H EE  +S V         VH+ KE ESSYLRQE EN
Sbjct: 506  DGSASTSAANFMYDILPEEVQELHVEEPISSGVVRTDPVAQRVHHFKEVESSYLRQELEN 565

Query: 2920 KMKMQKYKDMLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVE 2741
            K+K  K+KDMLKTRAALPIA LK DIL LL ENNVLVVCGETGSGKTTQVPQFILDDM++
Sbjct: 566  KLKNPKFKDMLKTRAALPIAGLKGDILRLLHENNVLVVCGETGSGKTTQVPQFILDDMIK 625

Query: 2740 SGLGGHCNIICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLF 2561
            SG GGHCNIICTQPRRIAAISVAERV+DERCEPSPGS GSLVGYQVRLDSA NDKTKLLF
Sbjct: 626  SGHGGHCNIICTQPRRIAAISVAERVSDERCEPSPGSRGSLVGYQVRLDSASNDKTKLLF 685

Query: 2560 CTTGILLRKIAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVIL 2381
            CTTGILLRK+ GD+NLTG+THVIVDEVHERSLLGDFLLIVLKNL+EKQS  +TPKLKVIL
Sbjct: 686  CTTGILLRKLMGDKNLTGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSALSTPKLKVIL 745

Query: 2380 MSATVDSHLFSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTK 2201
            MSATVDS LFS+YF NCPVITA+GRTHPVTTY++ED+YESI+YR+ASDS ASL +   TK
Sbjct: 746  MSATVDSDLFSRYFGNCPVITAEGRTHPVTTYYLEDIYESIDYRIASDSPASLGYGPLTK 805

Query: 2200 DKSSAVNNRRGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVID 2021
            +K+ AVNNRRGKKNLVLSAWGDDS+LSEE INPYYVPD YQSY EQTRQNLK++NEDVID
Sbjct: 806  EKAGAVNNRRGKKNLVLSAWGDDSLLSEENINPYYVPDRYQSYKEQTRQNLKRLNEDVID 865

Query: 2020 YDLLEDLVCYVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVAS 1841
            YDLLEDLVC+VDETC EGAILVFLPG+SEIY LVDKL ASYRFGG ++DWILPLHSSV+S
Sbjct: 866  YDLLEDLVCHVDETCDEGAILVFLPGISEIYTLVDKLAASYRFGGQASDWILPLHSSVSS 925

Query: 1840 SDQKKVFLRPPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDW 1661
            +DQKKVFLR P+NIRKVI+ATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDW
Sbjct: 926  TDQKKVFLRAPENIRKVIVATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDW 985

Query: 1660 ISXXXXXXXXXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLG 1481
            IS            RVKPGIC+ LYTR+RFEKLMRPFQVPEMLRMPLVELCLQIKLLSLG
Sbjct: 986  ISKANARQRRGRAGRVKPGICFCLYTRYRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLG 1045

Query: 1480 HIKPFLSKALEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYG 1301
            +IKP LSKALEPPREEAM +AI +LYEVGALE DE LTPLG+HLAKLPVDVLIGKMMLYG
Sbjct: 1046 YIKPLLSKALEPPREEAMTTAIKLLYEVGALEADEELTPLGHHLAKLPVDVLIGKMMLYG 1105

Query: 1300 GIFGCLSPILSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHL 1121
            GIFGCLSPILSISAFLSYKSPF+YPKDERQNVER          DG  +S+D  RQSDHL
Sbjct: 1106 GIFGCLSPILSISAFLSYKSPFVYPKDERQNVERAKLALLTGKLDGPSESHDSDRQSDHL 1165

Query: 1120 LMMIAYKKWEKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKT 941
            +MM AY+KWEKI+REKG+KAAQHFCNSYFLSSSVM MIRDMR+QFGTLLADIGLI LPK 
Sbjct: 1166 IMMTAYQKWEKILREKGVKAAQHFCNSYFLSSSVMYMIRDMRIQFGTLLADIGLIALPKQ 1225

Query: 940  YQIDRRKRENLDCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLK 761
            YQ+D RK+ENLD W SD SQPFN Y+ H+SI+KAILCAGLYPN+AAT KGIAE  L  LK
Sbjct: 1226 YQVDGRKKENLDTWFSDESQPFNMYSTHSSIVKAILCAGLYPNIAATGKGIAEATLTNLK 1285

Query: 760  QSTGLASKGHQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSP 581
            Q   LA+K   +WYDGRREV+IHPSSINS+LKEF++PF+VFLEKVETNKVFLRDTT++SP
Sbjct: 1286 QFASLATKERPIWYDGRREVNIHPSSINSTLKEFQYPFIVFLEKVETNKVFLRDTTVISP 1345

Query: 580  YSILLFGGFINVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAXX 401
             SILLFGG IN+ HQTG+V +DGWLKL+APAQTAVLFKELRLTLHS+L+ELIRKPE++  
Sbjct: 1346 NSILLFGGSINIQHQTGLVIVDGWLKLTAPAQTAVLFKELRLTLHSVLKELIRKPENS-- 1403

Query: 400  XXXXXXXXXSIIHLLLEEDKP 338
                     SIIHLLLEEDKP
Sbjct: 1404 TVAYNEVLRSIIHLLLEEDKP 1424


>ref|XP_009353736.1| PREDICTED: ATP-dependent RNA helicase DHX36 [Pyrus x bretschneideri]
          Length = 1437

 Score = 1962 bits (5083), Expect = 0.0
 Identities = 1022/1404 (72%), Positives = 1144/1404 (81%), Gaps = 7/1404 (0%)
 Frame = -1

Query: 4528 VDEXXXXXXXXXXXXSIYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNEL 4349
            VDE            ++YE LSCEGFTNDQIELALSALK GATFE A+DWLCLNL  NEL
Sbjct: 53   VDESLSKAQKTKKLKAVYEKLSCEGFTNDQIELALSALKEGATFENAVDWLCLNLTSNEL 112

Query: 4348 PLKFXXXXXXXXXXXXSVGVILTAREDWTPSVDQSSTPNEEEPGISIRTKGRWDDETLDS 4169
            PLKF            SVGVILT+R+DWTPSVD  +  +E+ P I+IRTKG  DD+TLDS
Sbjct: 113  PLKFSTGTSLHTSEGGSVGVILTSRDDWTPSVDTHTKIDEDAPRIAIRTKGHRDDKTLDS 172

Query: 4168 CQSSQADWIKRYVEQEEEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVK 3989
             Q SQADWIKRYVEQ++EDE STTWED   DE   +K+ +PRSYD+IA+EY  ARLEA K
Sbjct: 173  FQPSQADWIKRYVEQQQEDE-STTWEDD-ADEALAEKVLKPRSYDLIAKEYHAARLEAAK 230

Query: 3988 AKERGDKKSQEQAGHIIRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHEL 3809
            AK+  DK+SQE+AG IIR +KQELSALGLS+DILASEF  EQ +   SE T  S      
Sbjct: 231  AKQNRDKQSQERAGSIIRNLKQELSALGLSDDILASEFAKEQGSAP-SEDTYDSP----- 284

Query: 3808 SEAKECSIVEGGLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSID 3629
                 C   EGG A  L A+ES       E+SG     V  T S V V+ KI AEE+S D
Sbjct: 285  -----CKQSEGGFADDLIADESDT-----EHSGSIHSPVNSTPS-VPVQGKIVAEEESTD 333

Query: 3628 VELGNFFLEDGPSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLH 3449
            VE+GNFFLEDGPS +   P++ ELQ+KE+MREMSSEKNLEKL+GIW+KGD  KIPKA LH
Sbjct: 334  VEIGNFFLEDGPSADVPPPEILELQKKERMREMSSEKNLEKLDGIWKKGDSRKIPKAILH 393

Query: 3448 QLCQKSGWEAPXXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESA 3269
            QLCQ+SGWEAP             YTVSVLR+ASGRGKSRKAGGL TLQLP+   T +S 
Sbjct: 394  QLCQRSGWEAPKFNKVNGKQNNLSYTVSVLRKASGRGKSRKAGGLVTLQLPDQHVTFDST 453

Query: 3268 EDAQNKVAAFALYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSL 3089
            EDAQN+VAAFAL  LFPDLPVHLLI EPYASLV+QW             EDRRA+FVDSL
Sbjct: 454  EDAQNRVAAFALCQLFPDLPVHLLIIEPYASLVIQWMEGESSTNVEDSEEDRRAAFVDSL 513

Query: 3088 LGADGSNATSSADVMNNIISEEFQQIHYEENENSAVA-------EVHNHKEGESSYLRQE 2930
            L  DGS +TS+A+V N+I  ++ Q++H E+  ++ VA        VH  KE ES+YLRQE
Sbjct: 514  LRVDGSASTSAANVTNDIAPDKAQELHIEQPISAGVAYVDLAAQRVHRLKEVESTYLRQE 573

Query: 2929 QENKMKMQKYKDMLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDD 2750
             ENK+K  K+KDMLKTRAALPIA LK DIL LL ENNVLVVCGETGSGKTTQVPQFILDD
Sbjct: 574  LENKVKNPKFKDMLKTRAALPIAGLKGDILQLLSENNVLVVCGETGSGKTTQVPQFILDD 633

Query: 2749 MVESGLGGHCNIICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTK 2570
            M++SG GG CNIICTQPRRIAAISVAERV+DERCEPSPGS GSLVGYQVRLDSA NDKTK
Sbjct: 634  MIKSGHGGDCNIICTQPRRIAAISVAERVSDERCEPSPGSKGSLVGYQVRLDSASNDKTK 693

Query: 2569 LLFCTTGILLRKIAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLK 2390
            LLFCTTGILLRK  GD+NLTGVTHVIVDEVHERSLLGDFLLIVLKNL+EKQS  NTPKLK
Sbjct: 694  LLFCTTGILLRKFVGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKNLIEKQSALNTPKLK 753

Query: 2389 VILMSATVDSHLFSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFET 2210
            VILMSATVDS+LFS+YF NCPVITA+GRTHPVTTY++ED+YESI+YR+ASDS AS+R+  
Sbjct: 754  VILMSATVDSNLFSRYFGNCPVITAEGRTHPVTTYYLEDIYESIDYRIASDSPASMRYGA 813

Query: 2209 STKDKSSAVNNRRGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNED 2030
             TK+K+  VNNRRGKKNLVLS WGDDS+LSEE INPYYVPD+YQSY EQTRQNL++VNED
Sbjct: 814  LTKEKAGPVNNRRGKKNLVLSGWGDDSLLSEETINPYYVPDSYQSYKEQTRQNLQRVNED 873

Query: 2029 VIDYDLLEDLVCYVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSS 1850
            VIDYDLLEDLVC+VDETC+EGAILVFLPGVSEIY LVDKL+ASYRFGGP++DWILPLHSS
Sbjct: 874  VIDYDLLEDLVCHVDETCNEGAILVFLPGVSEIYTLVDKLSASYRFGGPASDWILPLHSS 933

Query: 1849 VASSDQKKVFLRPPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMV 1670
            VAS+DQKKVFLR P+NIRKVI+ATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMV
Sbjct: 934  VASTDQKKVFLRAPENIRKVIVATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMV 993

Query: 1669 EDWISXXXXXXXXXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLL 1490
            EDWIS            RVKPGIC+ LYTR+RFEKLMRPFQVPEMLRMPLVELCLQIKLL
Sbjct: 994  EDWISRANARQRRGRAGRVKPGICFCLYTRYRFEKLMRPFQVPEMLRMPLVELCLQIKLL 1053

Query: 1489 SLGHIKPFLSKALEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMM 1310
            SLG+IK FLS+ALEPPREEAM S+I +LYEVGALE DE LTPLG+HLAKLPVDVLIGKMM
Sbjct: 1054 SLGYIKSFLSEALEPPREEAMTSSIKLLYEVGALEADEELTPLGHHLAKLPVDVLIGKMM 1113

Query: 1309 LYGGIFGCLSPILSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQS 1130
            LYGGIFGCLSPILSI+AFLSYKSPFIYP+DERQNVER          DG  +S D  RQS
Sbjct: 1114 LYGGIFGCLSPILSIAAFLSYKSPFIYPRDERQNVERAKLALLTGKLDGPSESNDSDRQS 1173

Query: 1129 DHLLMMIAYKKWEKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKL 950
            DHL+MM AY KWEKI+REKG+KAAQ+FCNSYFLSSSVM MIRDMR+QFGTLLADIGLI L
Sbjct: 1174 DHLIMMNAYSKWEKILREKGVKAAQNFCNSYFLSSSVMYMIRDMRIQFGTLLADIGLIDL 1233

Query: 949  PKTYQIDRRKRENLDCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALG 770
            PK  Q+D RK+ENLD W SDASQPFN Y+NH+SI+KAILCAGLYPNVAATEKGIAE  L 
Sbjct: 1234 PKKNQVDGRKKENLDTWFSDASQPFNMYSNHSSIVKAILCAGLYPNVAATEKGIAEATLS 1293

Query: 769  TLKQSTGLASKGHQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTI 590
             LKQS GLA+K   +W+DGRREV IHPSSINS+LKEFR+PFL+FLEKVETNKVFLRDTT+
Sbjct: 1294 NLKQSAGLATKERPIWFDGRREVSIHPSSINSNLKEFRYPFLIFLEKVETNKVFLRDTTV 1353

Query: 589  VSPYSILLFGGFINVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPED 410
            +SP SILLFGG IN+ HQTG+V +DGWLKL+APAQTAVLFKELRLTLHS+L+ELIRKPE+
Sbjct: 1354 ISPNSILLFGGAINIQHQTGLVIVDGWLKLTAPAQTAVLFKELRLTLHSVLKELIRKPEN 1413

Query: 409  AXXXXXXXXXXXSIIHLLLEEDKP 338
            +           SIIHLLLEED+P
Sbjct: 1414 S--TVAHNEVLRSIIHLLLEEDRP 1435


>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 isoform X2 [Vitis
            vinifera] gi|297739540|emb|CBI29722.3| unnamed protein
            product [Vitis vinifera]
          Length = 1458

 Score = 1938 bits (5020), Expect = 0.0
 Identities = 1014/1461 (69%), Positives = 1151/1461 (78%), Gaps = 8/1461 (0%)
 Frame = -1

Query: 4699 MAPKKKQXXXXXXXXXXXXXXXXXSGPRLQIXXXXXXXXXXXXXXXXXXXXXXXXXLVDE 4520
            MAPKKKQ                 +GP+LQI                           D+
Sbjct: 1    MAPKKKQQQNKPSSSKSKSKSQTSAGPKLQISAENENRLRRLLLNSGRSGPASSPAPADD 60

Query: 4519 XXXXXXXXXXXXSIYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLK 4340
                        S+YE LSCEGF+ND IELALSALK GATFE+ALDWLC NL  NELPLK
Sbjct: 61   TLSKAQKAKKLRSVYEKLSCEGFSNDHIELALSALKEGATFESALDWLCFNLSSNELPLK 120

Query: 4339 FXXXXXXXXXXXXSVGVILTAREDWTPSVDQSSTPNEEE-PGISIRTKGRWDDETLDSCQ 4163
            F            S+G+I TAREDWTPSV  S    ++E  GISIR KGR DD+++DS Q
Sbjct: 121  FSSGTSLHANEGGSIGIISTAREDWTPSVYSSGNIEDDEVSGISIRIKGRRDDDSVDSRQ 180

Query: 4162 SSQADWIKRYVEQEEEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVKAK 3983
             SQADWI++YV Q+EEDE S TWED  VD+ STKK++EPRSY+ IA+EY  ARLEA+ AK
Sbjct: 181  QSQADWIRQYVAQQEEDE-SKTWEDDAVDDYSTKKVAEPRSYETIAKEYHAARLEALSAK 239

Query: 3982 ERGDKKSQEQAGHIIRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSE 3803
            E+GDKK QEQAGHIIRK+KQELSALGLS++ L S F++E A+  ASE   ++S   +  E
Sbjct: 240  EKGDKKGQEQAGHIIRKLKQELSALGLSDNSLESGFRYEHASGFASEDMSYNSMPEKHPE 299

Query: 3802 AKECSIVEGGLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVE 3623
            A     VEGG    +H  EST      E     EL +    S V +EE+I A+EDS DVE
Sbjct: 300  AITLCEVEGGSV--MHPSESTFDGSIKECFSSTELSMNSVSSSVPLEERIAAQEDSGDVE 357

Query: 3622 LGNFFLEDGPSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQL 3443
            L NFF ED PS+E L  +V +LQ KEKM+E+SS KNLEKLEGIW+KGDP KIPKA LHQL
Sbjct: 358  LSNFF-EDAPSSEVLPHEVLKLQNKEKMKELSSGKNLEKLEGIWKKGDPQKIPKAVLHQL 416

Query: 3442 CQKSGWEAPXXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAED 3263
            CQ+SGWEAP             Y VSVLR+++GRGKSRKAGGLTTL+LP+  +  ESAED
Sbjct: 417  CQRSGWEAPKLNKVLGKENGFCYAVSVLRKSTGRGKSRKAGGLTTLELPDQLEAFESAED 476

Query: 3262 AQNKVAAFALYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLG 3083
            AQN VAA+ALY LFPDLP+HL ITEPYAS V+QWK            EDRRA FV+S+L 
Sbjct: 477  AQNAVAAYALYQLFPDLPIHLAITEPYASFVIQWKEGESSIRIEDSEEDRRAGFVNSILD 536

Query: 3082 ADGSNATSSADVMNNIISEEFQQIHYEENENSAVA-------EVHNHKEGESSYLRQEQE 2924
            A  S +T+  DV +N + ++FQ    EEN N   A        V N KE ESSYL+QE E
Sbjct: 537  AGDSGSTAFVDVTDNSLPKKFQMPQIEENRNLNAAGPDLKPGRVGNFKEAESSYLKQEYE 596

Query: 2923 NKMKMQKYKDMLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMV 2744
            NKMK+ KYKDMLKTR+ LPIA LK +IL +LKE +VLVVCGETGSGKTTQVPQFILDDM+
Sbjct: 597  NKMKIGKYKDMLKTRSGLPIAELKSEILQVLKEKSVLVVCGETGSGKTTQVPQFILDDMI 656

Query: 2743 ESGLGGHCNIICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLL 2564
            E+G GG+CNIICTQPRRIAAISVAERVADERCEPSPGS GS+VGYQVRLDSA N +TKLL
Sbjct: 657  EAGNGGYCNIICTQPRRIAAISVAERVADERCEPSPGSDGSVVGYQVRLDSASNVRTKLL 716

Query: 2563 FCTTGILLRKIAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVI 2384
            FCTTGILLRK+AGD+NL+G+THVIVDEVHERSLLGDFLLIVLKNL+EKQST +TPKLKVI
Sbjct: 717  FCTTGILLRKLAGDKNLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSTDSTPKLKVI 776

Query: 2383 LMSATVDSHLFSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETST 2204
            LMSATVDS+LFS+YF  CPVITA GRTHPV+TYF+ED+YESI+YRLASDS AS+R+ETS 
Sbjct: 777  LMSATVDSNLFSRYFGGCPVITAVGRTHPVSTYFLEDIYESIDYRLASDSPASIRYETSI 836

Query: 2203 KDKSSAVNNRRGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVI 2024
            K K+SAVNNRRGK+NLVLSAWGDDS+LSEE INPYYVP+ YQSYSE+T+QNLK++NEDVI
Sbjct: 837  KQKTSAVNNRRGKRNLVLSAWGDDSVLSEECINPYYVPNAYQSYSEKTQQNLKRLNEDVI 896

Query: 2023 DYDLLEDLVCYVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVA 1844
            DYDLLEDLVCYVDET   GAILVFLPGV+EIYML+DKL ASYRF G S+DW+LPLHSS+A
Sbjct: 897  DYDLLEDLVCYVDETYPAGAILVFLPGVAEIYMLLDKLAASYRFRGLSSDWLLPLHSSIA 956

Query: 1843 SSDQKKVFLRPPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVED 1664
            S DQ+KVFL+PP+NIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVED
Sbjct: 957  SDDQRKVFLQPPENIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVED 1016

Query: 1663 WISXXXXXXXXXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSL 1484
            WIS            RVKPGIC++LYT +RFEKL+RPFQVPEMLRMPLVELCLQIKLLSL
Sbjct: 1017 WISQANAKQRRGRAGRVKPGICFSLYTHYRFEKLLRPFQVPEMLRMPLVELCLQIKLLSL 1076

Query: 1483 GHIKPFLSKALEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLY 1304
            G+IKPFLSKALEPP EEAM SAISVLYEVGA+EGDE LTPLG+HLAKLPVDVLIGKMMLY
Sbjct: 1077 GNIKPFLSKALEPPTEEAMTSAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLY 1136

Query: 1303 GGIFGCLSPILSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDH 1124
            G IFGCLSPILSISAFLSYKSPF+ PKDERQNVER          DG+ DS DG RQSDH
Sbjct: 1137 GAIFGCLSPILSISAFLSYKSPFLSPKDERQNVERAKLALLTDQVDGASDSNDGARQSDH 1196

Query: 1123 LLMMIAYKKWEKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPK 944
            L+MM+AYKKWE+I+ EKG KAAQHFCNSYFLSSSVM MIRDMRVQFG LLADIGLI LPK
Sbjct: 1197 LVMMVAYKKWERILHEKGAKAAQHFCNSYFLSSSVMHMIRDMRVQFGNLLADIGLISLPK 1256

Query: 943  TYQIDRRKRENLDCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTL 764
             YQI+R+K+ENL+ W SD SQPFNTY++H SI+KAILCAGLYPNVAATE+GIA VALG +
Sbjct: 1257 KYQIERKKKENLNSWFSDISQPFNTYSHHFSIVKAILCAGLYPNVAATEQGIAGVALGNI 1316

Query: 763  KQSTGLASKGHQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVS 584
             QS+G A+KG  VWYDGRREVHIHPSSIN +L  F++PFLVFLEKVETNKVFLRDTTI+S
Sbjct: 1317 IQSSGSATKGRPVWYDGRREVHIHPSSINGNLNAFQYPFLVFLEKVETNKVFLRDTTIIS 1376

Query: 583  PYSILLFGGFINVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAX 404
            PYSILLFGG INV HQ+G+V IDGWLKL+APAQ AVLFKELR+TLHS+L+ELIRKPE A 
Sbjct: 1377 PYSILLFGGSINVQHQSGMVNIDGWLKLAAPAQIAVLFKELRVTLHSVLKELIRKPEKA- 1435

Query: 403  XXXXXXXXXXSIIHLLLEEDK 341
                      SIIHLLLEE+K
Sbjct: 1436 -IVVNNEVVKSIIHLLLEEEK 1455


>ref|XP_004300262.1| PREDICTED: ATP-dependent RNA helicase DHX36 [Fragaria vesca subsp.
            vesca]
          Length = 1456

 Score = 1934 bits (5011), Expect = 0.0
 Identities = 984/1399 (70%), Positives = 1142/1399 (81%), Gaps = 2/1399 (0%)
 Frame = -1

Query: 4528 VDEXXXXXXXXXXXXSIYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNEL 4349
            VDE            ++YE LSCEGFTNDQIELALSA+K GAT+EAALDWLCLN+PG+EL
Sbjct: 71   VDESLSKAQKAKKLKAVYEQLSCEGFTNDQIELALSAVKEGATYEAALDWLCLNVPGDEL 130

Query: 4348 PLKFXXXXXXXXXXXXSVGVILTAREDWTPSVDQSSTPNEEEPGISIRTKGRWDDETLDS 4169
            PLKF            SVGV+LT+R+DWTPSVD S+  +E+ PGI+IRTKG+WDD+TLDS
Sbjct: 131  PLKFSSGVSMAANEGGSVGVVLTSRDDWTPSVDTSAKIDEDTPGIAIRTKGQWDDKTLDS 190

Query: 4168 CQSSQADWIKRYVEQEEEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVK 3989
            CQ SQADWIKRYVEQ+EEDE S+TWED + DE S  K+ +PRSYDVIA+EY  ARLEA +
Sbjct: 191  CQPSQADWIKRYVEQQEEDE-SSTWEDDVDDEVSGAKVRKPRSYDVIAKEYHAARLEAAE 249

Query: 3988 AKERGDKKSQEQAGHIIRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHEL 3809
            AK++ DKK+QE+AG +IR +KQELSALGLS+DILASEF+ EQ+   A  A   + TS E 
Sbjct: 250  AKQKKDKKNQERAGKVIRDLKQELSALGLSDDILASEFEQEQSIERAYSAFEDTDTSSEP 309

Query: 3808 SEAKECSIVEGGLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSID 3629
             +  +          GLHA+E     + ME     +L +  T S + V+EKI AEE++ D
Sbjct: 310  YKQAD----------GLHADELKADGNDMEPCSSVQLPINSTPSDLPVQEKIAAEEETTD 359

Query: 3628 VELGNFFLEDGPSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLH 3449
            +E+GNFFLED PSN+ L P + ELQ+KEK+REM SEKNLEKL+GIW+KG+P KIPKA  H
Sbjct: 360  MEIGNFFLEDAPSNDFLTPTILELQKKEKLREMLSEKNLEKLDGIWKKGEPQKIPKAVFH 419

Query: 3448 QLCQKSGWEAPXXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESA 3269
            QLCQKSGWEAP             YT+SVLR+ASGRGKSRKAGGL TLQLP+ D T +SA
Sbjct: 420  QLCQKSGWEAPKFNKVRGKDNSFSYTISVLRKASGRGKSRKAGGLVTLQLPDHDVTFDSA 479

Query: 3268 EDAQNKVAAFALYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSL 3089
            EDAQN+VAA+AL  LF DLP+HL+ITEPYASL++QWK            +DRRA+FVDSL
Sbjct: 480  EDAQNRVAAYALCQLFNDLPIHLVITEPYASLIIQWKEGETMTNVEDGVKDRRANFVDSL 539

Query: 3088 LGADGSNATSSADVM--NNIISEEFQQIHYEENENSAVAEVHNHKEGESSYLRQEQENKM 2915
            L ADGS++TS+A+V+  ++ + +   ++  +E  NS   E++  K+ ESSYLRQE ENK 
Sbjct: 540  LKADGSSSTSTANVVYDSDSLPKVVPRLQVQEPRNS---ELNPRKDAESSYLRQELENKQ 596

Query: 2914 KMQKYKDMLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVESG 2735
            K QK+K+MLK RAALPIA LK DIL LL++NNVLVVCGETGSGKTTQVPQFILDDM++SG
Sbjct: 597  KTQKFKEMLKARAALPIAGLKGDILQLLQDNNVLVVCGETGSGKTTQVPQFILDDMIQSG 656

Query: 2734 LGGHCNIICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLFCT 2555
             GGHCNIICTQPRRIAAISVA+RV DERCEPSPGS+GSLVGYQVRLD+A N+KTKLLFCT
Sbjct: 657  RGGHCNIICTQPRRIAAISVADRVTDERCEPSPGSNGSLVGYQVRLDNASNEKTKLLFCT 716

Query: 2554 TGILLRKIAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVILMS 2375
            TGILLRK  GDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNL+EKQS  NTPKLKVILMS
Sbjct: 717  TGILLRKFVGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLIEKQSALNTPKLKVILMS 776

Query: 2374 ATVDSHLFSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTKDK 2195
            ATVDS+LFS YF  CPVITA+GRTHPVTTY++ED+YE I+YRLASDS AS+ + TST+ K
Sbjct: 777  ATVDSNLFSNYFGGCPVITAEGRTHPVTTYYLEDIYERIDYRLASDSPASMVYGTSTEGK 836

Query: 2194 SSAVNNRRGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVIDYD 2015
            +  VNN RGKKNLVLS WGDDS+LSEE++NP YV D YQSY EQTRQNLK++NEDVIDYD
Sbjct: 837  TGPVNNSRGKKNLVLSGWGDDSVLSEEFVNPNYVHDMYQSYREQTRQNLKRLNEDVIDYD 896

Query: 2014 LLEDLVCYVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVASSD 1835
            LLEDLVC+VDETC+EGA+LVFLPGVSEIY LVDKL ASYRFGG ++DWILPLHSSVAS D
Sbjct: 897  LLEDLVCHVDETCAEGAVLVFLPGVSEIYTLVDKLAASYRFGGAASDWILPLHSSVASVD 956

Query: 1834 QKKVFLRPPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWIS 1655
            QKKVFL+ P NIRK+I+ATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWIS
Sbjct: 957  QKKVFLQAPDNIRKIIVATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWIS 1016

Query: 1654 XXXXXXXXXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHI 1475
                        RVKPGIC+ +YT +RFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHI
Sbjct: 1017 KANARQRRGRAGRVKPGICFCMYTSYRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHI 1076

Query: 1474 KPFLSKALEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYGGI 1295
            KPFLS+ALEPPREEAM SAI +LYEVGALE DE LTPLG+HLAKLPVDVLIGKMM++GGI
Sbjct: 1077 KPFLSQALEPPREEAMTSAIKILYEVGALETDEELTPLGHHLAKLPVDVLIGKMMIHGGI 1136

Query: 1294 FGCLSPILSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHLLM 1115
            FGCLSPILSISAFLSYKSPF++PKDE++N +R          DG  +S +  +QSDHL+M
Sbjct: 1137 FGCLSPILSISAFLSYKSPFVHPKDEKENAKRAKLALLTDKLDGPSESNNVDKQSDHLIM 1196

Query: 1114 MIAYKKWEKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKTYQ 935
            + AYKKWEKI+R+KG++AAQ FC+SYFLSSSVM MIRDMR+QFGTLLADIGLI LPK YQ
Sbjct: 1197 ITAYKKWEKILRDKGVRAAQQFCSSYFLSSSVMYMIRDMRIQFGTLLADIGLIDLPKKYQ 1256

Query: 934  IDRRKRENLDCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLKQS 755
            +D RK+ENLD W SDASQPFN Y+NH+ I+KAI+CAGLYPNVAATEKGIA   L  LKQ+
Sbjct: 1257 VDGRKKENLDAWFSDASQPFNMYSNHSPIVKAIICAGLYPNVAATEKGIAGTVLNNLKQA 1316

Query: 754  TGLASKGHQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSPYS 575
             G A+     WYDGRR+V+IHPSSIN ++ EFR+PFLVFLEKVETNKVFLRD+TI+SP S
Sbjct: 1317 PGHAASHCPTWYDGRRKVNIHPSSINHNVNEFRYPFLVFLEKVETNKVFLRDSTIISPNS 1376

Query: 574  ILLFGGFINVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAXXXX 395
            ILLFGG IN+ HQTG+V +DGWLKL+APAQTAVLFKELRLTLHS+L+ELIRKPE+     
Sbjct: 1377 ILLFGGSINIQHQTGLVIVDGWLKLTAPAQTAVLFKELRLTLHSVLKELIRKPENC--TV 1434

Query: 394  XXXXXXXSIIHLLLEEDKP 338
                   SIIHLLLEEDKP
Sbjct: 1435 GHNEVLRSIIHLLLEEDKP 1453


>ref|XP_010658001.1| PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Vitis
            vinifera]
          Length = 1464

 Score = 1931 bits (5003), Expect = 0.0
 Identities = 1014/1467 (69%), Positives = 1151/1467 (78%), Gaps = 14/1467 (0%)
 Frame = -1

Query: 4699 MAPKKKQXXXXXXXXXXXXXXXXXSGPRLQIXXXXXXXXXXXXXXXXXXXXXXXXXLVDE 4520
            MAPKKKQ                 +GP+LQI                           D+
Sbjct: 1    MAPKKKQQQNKPSSSKSKSKSQTSAGPKLQISAENENRLRRLLLNSGRSGPASSPAPADD 60

Query: 4519 XXXXXXXXXXXXSIYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLK 4340
                        S+YE LSCEGF+ND IELALSALK GATFE+ALDWLC NL  NELPLK
Sbjct: 61   TLSKAQKAKKLRSVYEKLSCEGFSNDHIELALSALKEGATFESALDWLCFNLSSNELPLK 120

Query: 4339 FXXXXXXXXXXXXSVGVILTAREDWTPSVDQSSTPNEEE-PGISIRTKGRWDDETLDSCQ 4163
            F            S+G+I TAREDWTPSV  S    ++E  GISIR KGR DD+++DS Q
Sbjct: 121  FSSGTSLHANEGGSIGIISTAREDWTPSVYSSGNIEDDEVSGISIRIKGRRDDDSVDSRQ 180

Query: 4162 SSQADWIKRYVEQEEEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVKAK 3983
             SQADWI++YV Q+EEDE S TWED  VD+ STKK++EPRSY+ IA+EY  ARLEA+ AK
Sbjct: 181  QSQADWIRQYVAQQEEDE-SKTWEDDAVDDYSTKKVAEPRSYETIAKEYHAARLEALSAK 239

Query: 3982 ERGDKKSQEQAGHIIRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSE 3803
            E+GDKK QEQAGHIIRK+KQELSALGLS++ L S F++E A+  ASE   ++S   +  E
Sbjct: 240  EKGDKKGQEQAGHIIRKLKQELSALGLSDNSLESGFRYEHASGFASEDMSYNSMPEKHPE 299

Query: 3802 AKECSIVEGGLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVE 3623
            A     VEGG    +H  EST      E     EL +    S V +EE+I A+EDS DVE
Sbjct: 300  AITLCEVEGGSV--MHPSESTFDGSIKECFSSTELSMNSVSSSVPLEERIAAQEDSGDVE 357

Query: 3622 LGNFFLEDGPSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQL 3443
            L NFF ED PS+E L  +V +LQ KEKM+E+SS KNLEKLEGIW+KGDP KIPKA LHQL
Sbjct: 358  LSNFF-EDAPSSEVLPHEVLKLQNKEKMKELSSGKNLEKLEGIWKKGDPQKIPKAVLHQL 416

Query: 3442 CQKSGWEAPXXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAED 3263
            CQ+SGWEAP             Y VSVLR+++GRGKSRKAGGLTTL+LP+  +  ESAED
Sbjct: 417  CQRSGWEAPKLNKVLGKENGFCYAVSVLRKSTGRGKSRKAGGLTTLELPDQLEAFESAED 476

Query: 3262 AQNKVAAFALYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLG 3083
            AQN VAA+ALY LFPDLP+HL ITEPYAS V+QWK            EDRRA FV+S+L 
Sbjct: 477  AQNAVAAYALYQLFPDLPIHLAITEPYASFVIQWKEGESSIRIEDSEEDRRAGFVNSILD 536

Query: 3082 ADGSNATSSADVMNNIISEEFQQIHYEENENSAVA-------EVHNHKEGESSYLRQEQE 2924
            A  S +T+  DV +N + ++FQ    EEN N   A        V N KE ESSYL+QE E
Sbjct: 537  AGDSGSTAFVDVTDNSLPKKFQMPQIEENRNLNAAGPDLKPGRVGNFKEAESSYLKQEYE 596

Query: 2923 NKMKMQKYKDMLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMV 2744
            NKMK+ KYKDMLKTR+ LPIA LK +IL +LKE +VLVVCGETGSGKTTQVPQFILDDM+
Sbjct: 597  NKMKIGKYKDMLKTRSGLPIAELKSEILQVLKEKSVLVVCGETGSGKTTQVPQFILDDMI 656

Query: 2743 ESGLGGHCNIICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLL 2564
            E+G GG+CNIICTQPRRIAAISVAERVADERCEPSPGS GS+VGYQVRLDSA N +TKLL
Sbjct: 657  EAGNGGYCNIICTQPRRIAAISVAERVADERCEPSPGSDGSVVGYQVRLDSASNVRTKLL 716

Query: 2563 FCTTGILLRKIAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVI 2384
            FCTTGILLRK+AGD+NL+G+THVIVDEVHERSLLGDFLLIVLKNL+EKQST +TPKLKVI
Sbjct: 717  FCTTGILLRKLAGDKNLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSTDSTPKLKVI 776

Query: 2383 LMSATVDSHLFSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETST 2204
            LMSATVDS+LFS+YF  CPVITA GRTHPV+TYF+ED+YESI+YRLASDS AS+R+ETS 
Sbjct: 777  LMSATVDSNLFSRYFGGCPVITAVGRTHPVSTYFLEDIYESIDYRLASDSPASIRYETSI 836

Query: 2203 KDKSSAVNNRRGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVI 2024
            K K+SAVNNRRGK+NLVLSAWGDDS+LSEE INPYYVP+ YQSYSE+T+QNLK++NEDVI
Sbjct: 837  KQKTSAVNNRRGKRNLVLSAWGDDSVLSEECINPYYVPNAYQSYSEKTQQNLKRLNEDVI 896

Query: 2023 DYDLLEDLVCYVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVA 1844
            DYDLLEDLVCYVDET   GAILVFLPGV+EIYML+DKL ASYRF G S+DW+LPLHSS+A
Sbjct: 897  DYDLLEDLVCYVDETYPAGAILVFLPGVAEIYMLLDKLAASYRFRGLSSDWLLPLHSSIA 956

Query: 1843 SSDQKKVFLRPPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVED 1664
            S DQ+KVFL+PP+NIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVED
Sbjct: 957  SDDQRKVFLQPPENIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVED 1016

Query: 1663 WISXXXXXXXXXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSL 1484
            WIS            RVKPGIC++LYT +RFEKL+RPFQVPEMLRMPLVELCLQIKLLSL
Sbjct: 1017 WISQANAKQRRGRAGRVKPGICFSLYTHYRFEKLLRPFQVPEMLRMPLVELCLQIKLLSL 1076

Query: 1483 GHIKPFLSKALEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLY 1304
            G+IKPFLSKALEPP EEAM SAISVLYEVGA+EGDE LTPLG+HLAKLPVDVLIGKMMLY
Sbjct: 1077 GNIKPFLSKALEPPTEEAMTSAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLY 1136

Query: 1303 GGIFGCLSPILSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDH 1124
            G IFGCLSPILSISAFLSYKSPF+ PKDERQNVER          DG+ DS DG RQSDH
Sbjct: 1137 GAIFGCLSPILSISAFLSYKSPFLSPKDERQNVERAKLALLTDQVDGASDSNDGARQSDH 1196

Query: 1123 LLMMIAYKKWEKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPK 944
            L+MM+AYKKWE+I+ EKG KAAQHFCNSYFLSSSVM MIRDMRVQFG LLADIGLI LPK
Sbjct: 1197 LVMMVAYKKWERILHEKGAKAAQHFCNSYFLSSSVMHMIRDMRVQFGNLLADIGLISLPK 1256

Query: 943  TYQIDRRKRENLDCWLSDASQPFNTYANHTSIIK------AILCAGLYPNVAATEKGIAE 782
             YQI+R+K+ENL+ W SD SQPFNTY++H SI+K      AILCAGLYPNVAATE+GIA 
Sbjct: 1257 KYQIERKKKENLNSWFSDISQPFNTYSHHFSIVKPNGALQAILCAGLYPNVAATEQGIAG 1316

Query: 781  VALGTLKQSTGLASKGHQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLR 602
            VALG + QS+G A+KG  VWYDGRREVHIHPSSIN +L  F++PFLVFLEKVETNKVFLR
Sbjct: 1317 VALGNIIQSSGSATKGRPVWYDGRREVHIHPSSINGNLNAFQYPFLVFLEKVETNKVFLR 1376

Query: 601  DTTIVSPYSILLFGGFINVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIR 422
            DTTI+SPYSILLFGG INV HQ+G+V IDGWLKL+APAQ AVLFKELR+TLHS+L+ELIR
Sbjct: 1377 DTTIISPYSILLFGGSINVQHQSGMVNIDGWLKLAAPAQIAVLFKELRVTLHSVLKELIR 1436

Query: 421  KPEDAXXXXXXXXXXXSIIHLLLEEDK 341
            KPE A           SIIHLLLEE+K
Sbjct: 1437 KPEKA--IVVNNEVVKSIIHLLLEEEK 1461


>ref|XP_007041294.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao]
            gi|590682240|ref|XP_007041295.1| ATP-dependent RNA
            helicase, putative isoform 1 [Theobroma cacao]
            gi|508705229|gb|EOX97125.1| ATP-dependent RNA helicase,
            putative isoform 1 [Theobroma cacao]
            gi|508705230|gb|EOX97126.1| ATP-dependent RNA helicase,
            putative isoform 1 [Theobroma cacao]
          Length = 1457

 Score = 1898 bits (4916), Expect = 0.0
 Identities = 976/1388 (70%), Positives = 1124/1388 (80%), Gaps = 7/1388 (0%)
 Frame = -1

Query: 4480 IYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLKFXXXXXXXXXXXX 4301
            +YE LSCEGF+NDQIE ALS+LK+GATFEAALDWLCLNLP NELPLKF            
Sbjct: 77   VYEKLSCEGFSNDQIEFALSSLKDGATFEAALDWLCLNLPQNELPLKFSSGTSFQSDGGP 136

Query: 4300 SVGVILTAREDWTPSVDQSSTPNEEEPGISIRTKGRWDDETLDSCQSSQADWIKRYVEQE 4121
             + VI    EDWTPSVD S+   E   G+S+RTKG  D+++L++CQ SQADWI++Y+EQ+
Sbjct: 137  -ISVISFKHEDWTPSVDASTRIKENLQGLSVRTKGSADEDSLNTCQPSQADWIRQYMEQQ 195

Query: 4120 EEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVKAKERGDKKSQEQAGHI 3941
            EEDE S TWED   DE S K++S PR YDVIA+EY  ARLEA  AKERGDKK QE+AG+I
Sbjct: 196  EEDE-SKTWEDETSDEDSVKEVSGPRPYDVIAKEYHAARLEATNAKERGDKKGQEKAGNI 254

Query: 3940 IRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSEAKECSIVEGGLAFG 3761
            IRK+KQELSALGLS+DILAS+F +E+A+   SE  +  S   E  E       EGG +  
Sbjct: 255  IRKLKQELSALGLSDDILASDFLYERASACVSEGMLTRSIPAEHPEVISLGD-EGGDSAA 313

Query: 3760 LHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVELGNFFLEDGPSNEG 3581
                     +D  +    +E   K   S +  +E + +E  S DVE+G+FFLED  +N+ 
Sbjct: 314  SVMFFGEATDDVNDTESSEEFSTKSIPSLLPAQEVV-SENMSEDVEIGDFFLEDDSTNDA 372

Query: 3580 LLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLCQKSGWEAPXXXXX 3401
            LL +V +LQ+KEKM+E+ SEKNLEKL+GIW+KG+P KIPKA LHQLCQ+SGWEAP     
Sbjct: 373  LLSEVLKLQKKEKMKELYSEKNLEKLDGIWKKGEPKKIPKAVLHQLCQRSGWEAPKFNKM 432

Query: 3400 XXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDAQNKVAAFALYSLF 3221
                    Y+VSVLR+ASGRGKSRKAGGL TLQLP+  +  ESAEDAQN+VAA+AL  LF
Sbjct: 433  PGKGKTFAYSVSVLRKASGRGKSRKAGGLITLQLPHEQEAFESAEDAQNRVAAYALCQLF 492

Query: 3220 PDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGADGSNATSSADVMN 3041
            PDLP+ L++TEPY+SL  +WK            EDRRA FVD LL AD S   + +D  N
Sbjct: 493  PDLPIQLVVTEPYSSLSFRWKEGESLTKIEDSEEDRRAGFVDWLLNADDSRLKAPSD--N 550

Query: 3040 NIISEEFQQIHYEENE--NSAVAE-----VHNHKEGESSYLRQEQENKMKMQKYKDMLKT 2882
                +EFQ+ + EEN+  +SAVA+       + KE ES YLRQE+EN+ K QKYK+MLKT
Sbjct: 551  KSALDEFQKPYIEENKTLSSAVADPIAERTSHAKEVESLYLRQEEENRKKTQKYKEMLKT 610

Query: 2881 RAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVESGLGGHCNIICTQ 2702
            RAALPIA LK+DIL LLKENNVLVVCGETGSGKTTQVPQFILDDM+ESG GGHCNI+CTQ
Sbjct: 611  RAALPIAGLKNDILQLLKENNVLVVCGETGSGKTTQVPQFILDDMIESGRGGHCNIVCTQ 670

Query: 2701 PRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLFCTTGILLRKIAGD 2522
            PRRIAAISVAERVADERCEPSPGS+GSLVGYQVRLD+ARN+KTKLLFCTTGILLRK+ GD
Sbjct: 671  PRRIAAISVAERVADERCEPSPGSNGSLVGYQVRLDNARNEKTKLLFCTTGILLRKLVGD 730

Query: 2521 RNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVILMSATVDSHLFSKY 2342
            ++LTGV+H+IVDEVHERSLLGDFLLIVLKNL+EKQS + TPKLKVILMSATVDS LFS+Y
Sbjct: 731  KSLTGVSHIIVDEVHERSLLGDFLLIVLKNLIEKQSAHGTPKLKVILMSATVDSDLFSRY 790

Query: 2341 FSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTKDKSSAVNNRRGKK 2162
            F  CPVITAQGRTH VTT F+ED+YESINY LASDS ASLR+ETSTKD S  VNNRRGKK
Sbjct: 791  FGFCPVITAQGRTHAVTTCFLEDIYESINYHLASDSPASLRYETSTKDMSGPVNNRRGKK 850

Query: 2161 NLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVIDYDLLEDLVCYVDE 1982
            NLVLSAWGDDS+LSE+Y+NP+Y   +YQSYSEQT++NLK++NEDVIDYDLLE LVC+VDE
Sbjct: 851  NLVLSAWGDDSLLSEDYVNPHYDSSSYQSYSEQTQKNLKRLNEDVIDYDLLEYLVCHVDE 910

Query: 1981 TCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVASSDQKKVFLRPPQN 1802
            TC EGAIL+FLPGV EIY L+D+L ASY+FGGPS+DW+LPLHSS+ASS+QKKVFL PP  
Sbjct: 911  TCGEGAILIFLPGVVEIYTLLDRLAASYQFGGPSSDWLLPLHSSIASSEQKKVFLNPPNG 970

Query: 1801 IRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISXXXXXXXXXXX 1622
            IRKVIIATN+AETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWIS           
Sbjct: 971  IRKVIIATNVAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRANAKQRRGRA 1030

Query: 1621 XRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHIKPFLSKALEPP 1442
             RVKPGIC+ LYT+HRFEKLMRP+QVPEMLRMPLVELCLQIKLLSLGHIKPFLSKALEPP
Sbjct: 1031 GRVKPGICFCLYTQHRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSKALEPP 1090

Query: 1441 REEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYGGIFGCLSPILSIS 1262
            +EEAMNSAIS+LYEVGA+EGDE LTPLG+HLAKLPVDVLIGKM+LYGGIFGCLSPILSIS
Sbjct: 1091 KEEAMNSAISLLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIS 1150

Query: 1261 AFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHLLMMIAYKKWEKIV 1082
            AFLSYKSPF+YPKDE+QNVER          DGS DS DG RQSDHLLMM+AY+KWEKI+
Sbjct: 1151 AFLSYKSPFLYPKDEKQNVERAKLALLSDKLDGSSDSNDGDRQSDHLLMMVAYRKWEKIL 1210

Query: 1081 REKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKTYQIDRRKRENLDC 902
            REKG+ AA+ FCN YFLSSSVM MIRDMR+QFGTLLADIG I LPK YQI  +K+ENLD 
Sbjct: 1211 REKGVNAAKQFCNKYFLSSSVMYMIRDMRIQFGTLLADIGFINLPKNYQIGAKKKENLDM 1270

Query: 901  WLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLKQSTGLASKGHQVW 722
            W S+ SQPFN +++H++++KAILCAGLYPNVAATE GI  VAL  LK S   A+KGH VW
Sbjct: 1271 WFSNYSQPFNRHSHHSAVVKAILCAGLYPNVAATELGITGVALSRLKHSP--ATKGHPVW 1328

Query: 721  YDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSPYSILLFGGFINVH 542
            YDGRREVHIHPSSINSSLK F+HPF+VFLEKVETNKVFLRDTTI+SP+SILLFGG IN+ 
Sbjct: 1329 YDGRREVHIHPSSINSSLKAFQHPFIVFLEKVETNKVFLRDTTIISPFSILLFGGLINIQ 1388

Query: 541  HQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAXXXXXXXXXXXSIIH 362
            HQ+G+VAIDGWLKL+APAQTAVL KELR  LHSIL+ELI+KPE+A           S+IH
Sbjct: 1389 HQSGLVAIDGWLKLTAPAQTAVLCKELRSALHSILKELIKKPENA--TIVDNEVVKSMIH 1446

Query: 361  LLLEEDKP 338
            LLLEEDKP
Sbjct: 1447 LLLEEDKP 1454


>ref|XP_012066649.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Jatropha curcas]
            gi|643736006|gb|KDP42422.1| hypothetical protein
            JCGZ_00219 [Jatropha curcas]
          Length = 1460

 Score = 1889 bits (4893), Expect = 0.0
 Identities = 980/1467 (66%), Positives = 1135/1467 (77%), Gaps = 13/1467 (0%)
 Frame = -1

Query: 4699 MAPKKKQXXXXXXXXXXXXXXXXXS---GPRLQIXXXXXXXXXXXXXXXXXXXXXXXXXL 4529
            MAPKKKQ                     GPRLQI                          
Sbjct: 1    MAPKKKQQKQSNNKASSTSSKSKPQSSSGPRLQISAENENRLRRLLLNSGQSTQPSSATS 60

Query: 4528 VDEXXXXXXXXXXXXSIYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNEL 4349
            V +            +IYE LSCEGF+NDQIELAL+++K+ ATFE+ALDWLCLNLPGNEL
Sbjct: 61   VQDNLSKVQKAKRLKNIYEKLSCEGFSNDQIELALTSIKDNATFESALDWLCLNLPGNEL 120

Query: 4348 PLKFXXXXXXXXXXXXSVGVILTAREDWTPSVDQSSTPNEEEPGISIRTKGRWDD--ETL 4175
            PLKF             V V+ TAR++WTPSV+ S+   E    +S+R K RWDD  + L
Sbjct: 121  PLKFSSGTSLNTNEGS-VSVVSTARDNWTPSVNASAKTEEPVQPVSVRIKARWDDNDDAL 179

Query: 4174 DSCQSSQADWIKRYVEQEEEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEA 3995
            DS   SQADWI++Y+EQ+EEDE S TWED+ VD     K   PRSY++IAEEY  ARLEA
Sbjct: 180  DS--RSQADWIRQYMEQQEEDE-SQTWEDYDVDGNLVNKDPVPRSYEIIAEEYYAARLEA 236

Query: 3994 VKAKERGDKKSQEQAGHIIRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSH 3815
             KAKE+GDKK+QEQAGH+IRK+KQEL++LGLS+D+LA EF HE+ + +  E T  S+   
Sbjct: 237  TKAKEKGDKKTQEQAGHVIRKLKQELASLGLSDDMLAQEFDHERHSVSVPEGTSMSAMPQ 296

Query: 3814 ELSEAKECSIVEGGLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDS 3635
            E  + K  S  EGG  F + ++E  +  + +E S   E   +   S V V++ I  E+++
Sbjct: 297  EQLQEKTSSDAEGGSDFLVPSDEIPVEANDVESSSSVEFSEESIPSSVPVQKDIVLEDEA 356

Query: 3634 IDVELGNFFLEDGPSNEGLLPDVYELQRKEKMRE-MSSEKNLEKLEGIWRKGDPLKIPKA 3458
             +VELG+FFLED  SNE L P V ELQ+KEK RE + +EKNLEKL+GIW+KGDP KIPKA
Sbjct: 357  GEVELGDFFLEDVASNEALPPQVLELQKKEKRREELLNEKNLEKLDGIWKKGDPHKIPKA 416

Query: 3457 SLHQLCQKSGWEAPXXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTS 3278
             LHQLCQKSGW+AP             Y+VS+LR+ASGRGKSRKAGGL TLQLP+ D+T 
Sbjct: 417  VLHQLCQKSGWDAPKFNKVLERREGFLYSVSILRKASGRGKSRKAGGLITLQLPDWDETY 476

Query: 3277 ESAEDAQNKVAAFALYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFV 3098
            ESAEDAQN+VAAFALY LFPD+P+HL++T+PYASL+LQWK            E+RRA FV
Sbjct: 477  ESAEDAQNRVAAFALYELFPDIPIHLIVTKPYASLILQWKEGESSSKVENAVEERRAGFV 536

Query: 3097 DSLLGADGSNATSSADVMNNIISEEFQQIHYEENENSAVAEVHN-------HKEGESSYL 2939
            D LL +D S A   AD  N + SE  Q  H +E    + A  H          + ESSYL
Sbjct: 537  DRLLNSDVSIAR--ADTTNGL-SEPLQNSHVQEASKFSDAGAHPVAGREKITSDVESSYL 593

Query: 2938 RQEQENKMKMQKYKDMLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFI 2759
            RQEQENK  MQKY+DMLKTR ALPIA LKDDIL +L ENN LVVCGETGSGKTTQVPQFI
Sbjct: 594  RQEQENKKTMQKYRDMLKTRNALPIAGLKDDILQMLNENNFLVVCGETGSGKTTQVPQFI 653

Query: 2758 LDDMVESGLGGHCNIICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARND 2579
            LDDM+ESG GG C+IICTQPRRIAAISVAERVADERCEPSPGS+GSLVGYQVRLDSARN+
Sbjct: 654  LDDMIESGRGGECSIICTQPRRIAAISVAERVADERCEPSPGSNGSLVGYQVRLDSARNE 713

Query: 2578 KTKLLFCTTGILLRKIAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTP 2399
            KTKLLFCTTGILLR++ GDRNL GVTHVIVDEVHERSLLGDFLLI+LK+L+EK+S + TP
Sbjct: 714  KTKLLFCTTGILLRRLVGDRNLAGVTHVIVDEVHERSLLGDFLLIILKSLIEKESGHGTP 773

Query: 2398 KLKVILMSATVDSHLFSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLR 2219
            KLKVILMSATVDS LFS YF +CPV+TAQGRTHPVTTYF+ED+YESINY L SDS A+L+
Sbjct: 774  KLKVILMSATVDSTLFSSYFGHCPVLTAQGRTHPVTTYFLEDIYESINYHLTSDSPAALK 833

Query: 2218 FETSTKDKSSAVNNRRGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKV 2039
            ++T T DKS +VNNRRGKKNLVLSAWGDDS+LSE+++NP+YV  NYQ Y EQTRQNLKK+
Sbjct: 834  YQTPTFDKSGSVNNRRGKKNLVLSAWGDDSLLSEDFVNPHYVSSNYQLYGEQTRQNLKKL 893

Query: 2038 NEDVIDYDLLEDLVCYVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPL 1859
            NEDVIDYD+LEDL+CYVDETC EGAILVFLPGVSEI+ML+D+L+ASYRFGG S+DW+LPL
Sbjct: 894  NEDVIDYDVLEDLICYVDETCGEGAILVFLPGVSEIHMLLDRLSASYRFGGTSSDWVLPL 953

Query: 1858 HSSVASSDQKKVFLRPPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLS 1679
            HSS+A  DQKKVFLRPP+N RKVIIATNIAETSITIDDV+YVIDCGKHKENRYNPQKKL+
Sbjct: 954  HSSIAPMDQKKVFLRPPENTRKVIIATNIAETSITIDDVIYVIDCGKHKENRYNPQKKLT 1013

Query: 1678 SMVEDWISXXXXXXXXXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQI 1499
            SMVEDWIS            RVKPGIC+ LYTRHRFEKLMRP+QVPEMLRMPLVELCLQI
Sbjct: 1014 SMVEDWISQANARQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELCLQI 1073

Query: 1498 KLLSLGHIKPFLSKALEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIG 1319
            KLLSLGHIKPFLSKALEPP +EAM SAIS+LYEVGA+EGDE LTPLG+HLAKLPVDVLIG
Sbjct: 1074 KLLSLGHIKPFLSKALEPPNDEAMTSAISLLYEVGAVEGDEELTPLGHHLAKLPVDVLIG 1133

Query: 1318 KMMLYGGIFGCLSPILSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGH 1139
            KMMLYG IFGCLSPILSISAFLSYKSPF+YPKDERQNVER          DGS DS D  
Sbjct: 1134 KMMLYGAIFGCLSPILSISAFLSYKSPFVYPKDERQNVERAKLALLTDKSDGSNDSNDND 1193

Query: 1138 RQSDHLLMMIAYKKWEKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGL 959
            +QSDH++MM+AYKKWEKI++E+G KAAQ FCNSYFLSSSVM MIRDMR+QFG+LLADIG 
Sbjct: 1194 KQSDHIVMMVAYKKWEKILQERGAKAAQQFCNSYFLSSSVMYMIRDMRIQFGSLLADIGF 1253

Query: 958  IKLPKTYQIDRRKRENLDCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEV 779
            I LPK YQ   + RENL  WLSD SQ FN Y++H+SI+KAIL AGLYPNVAATE+GI   
Sbjct: 1254 ITLPKNYQTLGKNRENLHRWLSDRSQTFNIYSHHSSIVKAILSAGLYPNVAATEQGITAT 1313

Query: 778  ALGTLKQSTGLASKGHQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRD 599
            A  +LKQS+   +K   +WYDGRREVHIHPSSINS +K F+HPFLVFLEKVETNKVFLRD
Sbjct: 1314 AFNSLKQSSNPVTKARPLWYDGRREVHIHPSSINSGVKAFQHPFLVFLEKVETNKVFLRD 1373

Query: 598  TTIVSPYSILLFGGFINVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRK 419
            TTIVSP+SILLFGGFIN+ HQTG+V IDGWLKL+APAQ+AVLFKELRL LHS+L+EL++K
Sbjct: 1374 TTIVSPFSILLFGGFINIQHQTGLVTIDGWLKLTAPAQSAVLFKELRLALHSLLKELVQK 1433

Query: 418  PEDAXXXXXXXXXXXSIIHLLLEEDKP 338
            P++A           S+I LLL+EDKP
Sbjct: 1434 PKNA--TIVENEVIRSMIQLLLDEDKP 1458


>ref|XP_006494370.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X1 [Citrus
            sinensis]
          Length = 1455

 Score = 1885 bits (4883), Expect = 0.0
 Identities = 972/1389 (69%), Positives = 1120/1389 (80%), Gaps = 7/1389 (0%)
 Frame = -1

Query: 4480 IYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLKFXXXXXXXXXXXX 4301
            +YE LSCEGF NDQIELALS+LK+ ATFE ALDWLCLNLPGNELPLKF            
Sbjct: 77   VYEKLSCEGFGNDQIELALSSLKDDATFEDALDWLCLNLPGNELPLKFSSGTSQQTNRGA 136

Query: 4300 SVGVILTAREDWTPSVDQSSTPNEEEPGISIRTKGRWDDETLDSCQSSQADWIKRYVEQE 4121
            SVGV+  AR+DWTPS   S++ NEE   IS+R KGR DD  L S Q SQADWI++Y+EQ+
Sbjct: 137  SVGVLSVARDDWTPSAVSSTSTNEETQNISVRIKGRQDDNNLGSLQRSQADWIRQYMEQQ 196

Query: 4120 EEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVKAKERGDKKSQEQAGHI 3941
            EEDE   TWEDH  D+ S+K++S+PRSYDVIA EY +ARLEA KAKE+GDKK Q QAG I
Sbjct: 197  EEDE-DETWEDHATDKSSSKEVSKPRSYDVIAREYLMARLEATKAKEKGDKKGQAQAGSI 255

Query: 3940 IRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSEAKECSIVEGGLAFG 3761
            I K+KQELSALGLS+DILA +F++++A+  A++ T  SS   E  E+ +     GG  F 
Sbjct: 256  IGKLKQELSALGLSDDILALDFENQRASSYATKDTCTSSVPDEDPESDD---QHGGSDFD 312

Query: 3760 LHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVELGNFFLEDGPSNEG 3581
            +H +   I     E    KE  ++   S   V+EK   E++  DVELG FF ED    + 
Sbjct: 313  MHTDHLIIGGKDSESCSSKEFPLQPIPSVEPVQEK--TEDEPADVELGGFFSEDALFGDT 370

Query: 3580 LLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLCQKSGWEAPXXXXX 3401
            L P++ ELQ+KEKMRE+ S+KN+EKL+GIW+KG+P KIPKA LHQLCQ+SGW+AP     
Sbjct: 371  LAPEILELQKKEKMRELCSDKNIEKLDGIWKKGEPHKIPKAVLHQLCQRSGWDAPKFNKV 430

Query: 3400 XXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDAQNKVAAFALYSLF 3221
                    Y VSVLR+ASGRGKSRKAGGL TL+LP   +T ES EDAQN+VAAFAL++LF
Sbjct: 431  TGKNNNFSYAVSVLRKASGRGKSRKAGGLITLELPGEGETFESVEDAQNQVAAFALHNLF 490

Query: 3220 PDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGADGSNATSSADVMN 3041
            PDLP+HL +TEPYASL+L+WK            E+RRA FVD LL AD S++T+  +V +
Sbjct: 491  PDLPIHLAVTEPYASLILRWKEGESSITIEDSDENRRAVFVDQLLRADTSSSTAFINVPS 550

Query: 3040 NIISEEFQQIHYEENENSAVA-------EVHNHKEGESSYLRQEQENKMKMQKYKDMLKT 2882
            +  S+     + EEN+N  +A        V   +E ESS L+QEQENK KMQKYKDM KT
Sbjct: 551  SSFSDSVLT-NVEENDNLRIAAADPNDGRVKYIREVESSRLKQEQENKKKMQKYKDMSKT 609

Query: 2881 RAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVESGLGGHCNIICTQ 2702
            RAALPIA+LK DIL LLKE +VLVVCGETGSGKTTQVPQFILDDM+ESG GGHCNIICTQ
Sbjct: 610  RAALPIATLKSDILQLLKEKDVLVVCGETGSGKTTQVPQFILDDMIESGHGGHCNIICTQ 669

Query: 2701 PRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLFCTTGILLRKIAGD 2522
            PRRIAAISVAERVADERCEPSPGS GSLVGYQVRLDSARN++TKLLFCTTGILLRKIAGD
Sbjct: 670  PRRIAAISVAERVADERCEPSPGSDGSLVGYQVRLDSARNERTKLLFCTTGILLRKIAGD 729

Query: 2521 RNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVILMSATVDSHLFSKY 2342
            +NLTGVTHVIVDEVHERSLLGDFLLIVLK+L+EKQS ++TPKLKVILMSATVDS+LFS+Y
Sbjct: 730  KNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRY 789

Query: 2341 FSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTKDKSSAVNNRRGKK 2162
            F +CPVITA+GRTHPVTTYF+EDVYESINYRLASDS+A++R+E S+K  S  VNNRRGKK
Sbjct: 790  FGDCPVITAEGRTHPVTTYFLEDVYESINYRLASDSAAAIRYEASSK--SGPVNNRRGKK 847

Query: 2161 NLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVIDYDLLEDLVCYVDE 1982
            NLVLS WGDDS+LSEEYINPYY P +Y SYSEQTRQNLK++NEDVIDYDLLEDLVC+VDE
Sbjct: 848  NLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCHVDE 907

Query: 1981 TCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVASSDQKKVFLRPPQN 1802
            TC EGAILVFLPGV+EI++L+D+L ASYRFGGPS+DW+L LHSSVAS DQKKVFLRPP+ 
Sbjct: 908  TCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEK 967

Query: 1801 IRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISXXXXXXXXXXX 1622
            IRKVIIATNIAETSITIDDVVYV DCG+HKENRYNPQKKLSSMVEDWIS           
Sbjct: 968  IRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNPQKKLSSMVEDWISQANARQRRGRA 1027

Query: 1621 XRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHIKPFLSKALEPP 1442
             RVKPGICY+LYTRHR+EKLMRP+QVPEM RMPLVELCLQIKLLSLG IK FLSKALEPP
Sbjct: 1028 GRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPP 1087

Query: 1441 REEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYGGIFGCLSPILSIS 1262
            +EEA+ +AISVLYEVGA+EGDE LTPLG+HLAKLPVDVLIGKMML+GGIFGCLSPILSIS
Sbjct: 1088 KEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSIS 1147

Query: 1261 AFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHLLMMIAYKKWEKIV 1082
            AFLSYKSPFIYPKDE+QNVER          +G  DS D   QSDHL++M+AYKKW+KI+
Sbjct: 1148 AFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKIL 1207

Query: 1081 REKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKTYQIDRRKRENLDC 902
             ++G KAAQ FC+ YFLSSSVM MIRDMR+QFGTLLADIGLI LP   Q   +K+E+LD 
Sbjct: 1208 LKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKEDLDS 1267

Query: 901  WLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLKQSTGLASKGHQVW 722
            W SD SQ FN YANH+SI+KAILCAGLYPNVAATE+G+A  AL  L++S+   +K H VW
Sbjct: 1268 WFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSTAKAHPVW 1327

Query: 721  YDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSPYSILLFGGFINVH 542
            YDGRREVHIHPSSINS LK F HPFLVFLEKVETNKVFLRDTTIVSP+SILLFGG INV 
Sbjct: 1328 YDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQ 1387

Query: 541  HQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAXXXXXXXXXXXSIIH 362
            HQTG V IDGWLK++APAQTAVLFKELRLTLHSILR++IR P+++           S+I 
Sbjct: 1388 HQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNS--TIANNEVVKSMIQ 1445

Query: 361  LLLEEDKPR 335
            LLLEEDKP+
Sbjct: 1446 LLLEEDKPQ 1454


>ref|XP_012467824.1| PREDICTED: ATP-dependent RNA helicase DHX36 isoform X1 [Gossypium
            raimondii] gi|763748726|gb|KJB16165.1| hypothetical
            protein B456_002G216000 [Gossypium raimondii]
          Length = 1470

 Score = 1859 bits (4815), Expect = 0.0
 Identities = 964/1397 (69%), Positives = 1104/1397 (79%), Gaps = 16/1397 (1%)
 Frame = -1

Query: 4480 IYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLKFXXXXXXXXXXXX 4301
            +YE LSCEGF+NDQIELALS+LK+GATFE ALDWLCLNLP NELPLKF            
Sbjct: 87   LYEKLSCEGFSNDQIELALSSLKDGATFETALDWLCLNLPRNELPLKFSSGISLHSDGGG 146

Query: 4300 SVGVILTAREDWTPSVDQSSTPNEEEPGISIRTKGRWDDETLDSCQSSQADWIKRYVEQE 4121
            S+ VI   REDWTPSVD S+   E   G+S+RTK   D+ +L+ CQ SQADWI++Y+EQ+
Sbjct: 147  SISVISVEREDWTPSVDASTRIKENLHGLSVRTKSSEDENSLNMCQPSQADWIRQYMEQQ 206

Query: 4120 EEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVKAKERGDKKSQEQAGHI 3941
            EEDE S TWED   DEGS +++S PR YDVIA+EY  ARLEA KAKE+ DK  QE+AG  
Sbjct: 207  EEDE-SKTWEDEASDEGSAEEVSGPRPYDVIAKEYHAARLEATKAKEKKDKNGQEKAGSR 265

Query: 3940 IRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSEA-----KECS---- 3788
            IRK+KQELSALGLS+ +LAS+F HE+A+ + SE T+ SS   E  E       EC+    
Sbjct: 266  IRKLKQELSALGLSDAVLASDFLHERASASVSEGTVTSSMPEEQPEMISLGDAECNSAAC 325

Query: 3787 IVEGGLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVELGNFF 3608
            ++  G+A G   +  T           KEL  K   S +  +EK  AE  S D+E+G+FF
Sbjct: 326  VITSGVATGSVNDTET----------SKELSTKSIPSLLPTQEKGDAENMSEDLEIGDFF 375

Query: 3607 LEDGPSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLCQKSG 3428
            LED   N+ L  +V +L+++EKM+E+ SEKNLEKL+GIW+KG+  KIPKA LHQLCQ+SG
Sbjct: 376  LEDSSINDVLASEVLKLRKQEKMKELYSEKNLEKLDGIWKKGESKKIPKAVLHQLCQRSG 435

Query: 3427 WEAPXXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDAQNKV 3248
            WEAP             Y+VSVLR+ASGRGKSRKAGGL TLQLPN  +  ESAED+QN+V
Sbjct: 436  WEAPKFDKMPAKGKSFAYSVSVLRKASGRGKSRKAGGLITLQLPNEQEAFESAEDSQNRV 495

Query: 3247 AAFALYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGADGSN 3068
            AAFAL  LFPDLP  L++TEPY+SL+ QWK            EDRRA FVD LL  + S 
Sbjct: 496  AAFALCQLFPDLPTQLIVTEPYSSLIFQWKGGESLTKIEDNEEDRRAGFVDRLLRDEDSR 555

Query: 3067 ATSSADVMNNIISEEFQQIHYEENENSA------VAEVHNH-KEGESSYLRQEQENKMKM 2909
            + +     N     EFQ+   E+N+ S+      V E  +H KE ES YLRQE+E +   
Sbjct: 556  SKAPGHDTNESALNEFQKACLEDNKTSSSSVADPVYERKSHAKEMESVYLRQEEEKRKHT 615

Query: 2908 QKYKDMLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVESGLG 2729
            Q+YK+MLKTRAALP+A LK+DIL LLKENNVLVVCGETGSGKTTQVPQFILDDM+ESG G
Sbjct: 616  QRYKEMLKTRAALPVAGLKNDILQLLKENNVLVVCGETGSGKTTQVPQFILDDMIESGHG 675

Query: 2728 GHCNIICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLFCTTG 2549
            GHC+IICTQPRRIAAISVAERVADERCEPSPGS+ SLVGYQVRLD+ARN+KTKLLFCTTG
Sbjct: 676  GHCSIICTQPRRIAAISVAERVADERCEPSPGSNWSLVGYQVRLDNARNEKTKLLFCTTG 735

Query: 2548 ILLRKIAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVILMSAT 2369
            ILLRK+AGD+NLTGVTH+IVDEVHERSLLGDFLLIVLKNL+EKQS  NTPKLKVILMSAT
Sbjct: 736  ILLRKLAGDKNLTGVTHIIVDEVHERSLLGDFLLIVLKNLIEKQSVSNTPKLKVILMSAT 795

Query: 2368 VDSHLFSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTKDKSS 2189
            VDS LFS+YF  CPVITAQGRTHPVTT F+ED+YE INY LASDS ASLR ETST+D   
Sbjct: 796  VDSDLFSRYFGLCPVITAQGRTHPVTTCFLEDIYERINYHLASDSPASLRCETSTRDMRG 855

Query: 2188 AVNNRRGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVIDYDLL 2009
             VNN RGKKNLVLSAWGDDS+LSEEY+NP+Y   +YQSYSEQT+QNLK++NEDVIDYDLL
Sbjct: 856  PVNNHRGKKNLVLSAWGDDSLLSEEYVNPHYDSSSYQSYSEQTQQNLKRLNEDVIDYDLL 915

Query: 2008 EDLVCYVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVASSDQK 1829
            EDLVC+VDETC +GAIL+FLPGV EI+ L+D+L ASYRF GPS+DW+LPLHSS+A+ +QK
Sbjct: 916  EDLVCHVDETCDKGAILIFLPGVVEIHTLLDRLAASYRFAGPSSDWLLPLHSSIAADEQK 975

Query: 1828 KVFLRPPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISXX 1649
            KVFL PP  IRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWIS  
Sbjct: 976  KVFLNPPDGIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRA 1035

Query: 1648 XXXXXXXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHIKP 1469
                      RVKPGIC+ LYTRHRFEKLMRP+QVPEMLRMPLVELCLQIKLLSLG IKP
Sbjct: 1036 NAKQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGQIKP 1095

Query: 1468 FLSKALEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYGGIFG 1289
            FLSKALEPP+EEAMNSAIS+LYEVGA+EGDE LTPLG+HLAKLPVDVLIGKM+LYGGIFG
Sbjct: 1096 FLSKALEPPKEEAMNSAISLLYEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFG 1155

Query: 1288 CLSPILSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHLLMMI 1109
            CLSPILSISA LSYKSPF+YPKDE+QNVER          D S D  D  RQSDHLLMM 
Sbjct: 1156 CLSPILSISACLSYKSPFLYPKDEKQNVERAKLALLSEKLDESSDLNDAERQSDHLLMMA 1215

Query: 1108 AYKKWEKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKTYQID 929
            AY+KWEKI REKG+KAAQ FC  YFLSSSVM MIRDMR+QFGTLLADIG I LPK Y+  
Sbjct: 1216 AYRKWEKIFREKGVKAAQRFCKMYFLSSSVMSMIRDMRIQFGTLLADIGFINLPKNYKSG 1275

Query: 928  RRKRENLDCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLKQSTG 749
             +++ENLD W SD SQPFN +++H++++KAILCAGLYPNVAATE GI  VAL  LK +  
Sbjct: 1276 GKRKENLDGWFSDYSQPFNIHSHHSAVVKAILCAGLYPNVAATELGITGVALSRLKLNP- 1334

Query: 748  LASKGHQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSPYSIL 569
             A+KGH VWYDGRREVHIHPSSINSSLK F+H FLVFLEKVETNKVFLRDTTI+SP+SIL
Sbjct: 1335 -ATKGHPVWYDGRREVHIHPSSINSSLKSFQHLFLVFLEKVETNKVFLRDTTIISPFSIL 1393

Query: 568  LFGGFINVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAXXXXXX 389
            LFGG IN+ HQ+G+V IDGWLKL+APAQTAVL KELR  LHSIL+ELIRKPE+A      
Sbjct: 1394 LFGGLINIQHQSGLVVIDGWLKLTAPAQTAVLCKELRSALHSILKELIRKPENA--TIVD 1451

Query: 388  XXXXXSIIHLLLEEDKP 338
                 S+IHLLLEEDKP
Sbjct: 1452 NEVVKSMIHLLLEEDKP 1468


>gb|KJB16164.1| hypothetical protein B456_002G216000 [Gossypium raimondii]
          Length = 1469

 Score = 1853 bits (4801), Expect = 0.0
 Identities = 964/1397 (69%), Positives = 1103/1397 (78%), Gaps = 16/1397 (1%)
 Frame = -1

Query: 4480 IYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLKFXXXXXXXXXXXX 4301
            +YE LSCEGF+NDQIELALS+LK+GATFE ALDWLCLNLP NELPLKF            
Sbjct: 87   LYEKLSCEGFSNDQIELALSSLKDGATFETALDWLCLNLPRNELPLKFSSGISLHSDGGG 146

Query: 4300 SVGVILTAREDWTPSVDQSSTPNEEEPGISIRTKGRWDDETLDSCQSSQADWIKRYVEQE 4121
            S+ VI   REDWTPSVD S+   E   G+S+RTK   D+ +L+ CQ SQADWI++Y+EQ+
Sbjct: 147  SISVISVEREDWTPSVDASTRIKENLHGLSVRTKSSEDENSLNMCQPSQADWIRQYMEQQ 206

Query: 4120 EEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVKAKERGDKKSQEQAGHI 3941
            EEDE S TWED   DEGS +++S PR YDVIA+EY  ARLEA KAKE+ DK  QE+AG  
Sbjct: 207  EEDE-SKTWEDEASDEGSAEEVSGPRPYDVIAKEYHAARLEATKAKEKKDKNGQEKAGSR 265

Query: 3940 IRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSEA-----KECS---- 3788
            IRK+KQELSALGLS+ +LAS+F HE+A+ + SE T+ SS   E  E       EC+    
Sbjct: 266  IRKLKQELSALGLSDAVLASDFLHERASASVSEGTVTSSMPEEQPEMISLGDAECNSAAC 325

Query: 3787 IVEGGLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVELGNFF 3608
            ++  G+A G   +  T           KEL  K   S +  +EK  AE  S D+E+G+FF
Sbjct: 326  VITSGVATGSVNDTET----------SKELSTKSIPSLLPTQEKGDAENMSEDLEIGDFF 375

Query: 3607 LEDGPSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLCQKSG 3428
            LED   N+ L  +V +L+++EKM+E+ SEKNLEKL+GIW+KG+  KIPKA LHQLCQ+SG
Sbjct: 376  LEDSSINDVLASEVLKLRKQEKMKELYSEKNLEKLDGIWKKGESKKIPKAVLHQLCQRSG 435

Query: 3427 WEAPXXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDAQNKV 3248
            WEAP             Y+VSVLR+ASGRGKSRKAGGL TLQLPN  +  ESAED+QN+V
Sbjct: 436  WEAPKFDKMPAKGKSFAYSVSVLRKASGRGKSRKAGGLITLQLPNEQEAFESAEDSQNRV 495

Query: 3247 AAFALYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGADGSN 3068
            AAFAL  LFPDLP  L++TEPY+SL+ QWK            EDRRA FVD LL  + S 
Sbjct: 496  AAFALCQLFPDLPTQLIVTEPYSSLIFQWKGGESLTKIEDNEEDRRAGFVDRLLRDEDSR 555

Query: 3067 ATSSADVMNNIISEEFQQIHYEENENSA------VAEVHNH-KEGESSYLRQEQENKMKM 2909
            + +     N     EFQ+   E+N+ S+      V E  +H KE ES YLRQE+E +   
Sbjct: 556  SKAPGHDTNESALNEFQKACLEDNKTSSSSVADPVYERKSHAKEMESVYLRQEEEKRKHT 615

Query: 2908 QKYKDMLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVESGLG 2729
            Q+YK MLKTRAALP+A LK+DIL LLKENNVLVVCGETGSGKTTQVPQFILDDM+ESG G
Sbjct: 616  QRYK-MLKTRAALPVAGLKNDILQLLKENNVLVVCGETGSGKTTQVPQFILDDMIESGHG 674

Query: 2728 GHCNIICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLFCTTG 2549
            GHC+IICTQPRRIAAISVAERVADERCEPSPGS+ SLVGYQVRLD+ARN+KTKLLFCTTG
Sbjct: 675  GHCSIICTQPRRIAAISVAERVADERCEPSPGSNWSLVGYQVRLDNARNEKTKLLFCTTG 734

Query: 2548 ILLRKIAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVILMSAT 2369
            ILLRK+AGD+NLTGVTH+IVDEVHERSLLGDFLLIVLKNL+EKQS  NTPKLKVILMSAT
Sbjct: 735  ILLRKLAGDKNLTGVTHIIVDEVHERSLLGDFLLIVLKNLIEKQSVSNTPKLKVILMSAT 794

Query: 2368 VDSHLFSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTKDKSS 2189
            VDS LFS+YF  CPVITAQGRTHPVTT F+ED+YE INY LASDS ASLR ETST+D   
Sbjct: 795  VDSDLFSRYFGLCPVITAQGRTHPVTTCFLEDIYERINYHLASDSPASLRCETSTRDMRG 854

Query: 2188 AVNNRRGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVIDYDLL 2009
             VNN RGKKNLVLSAWGDDS+LSEEY+NP+Y   +YQSYSEQT+QNLK++NEDVIDYDLL
Sbjct: 855  PVNNHRGKKNLVLSAWGDDSLLSEEYVNPHYDSSSYQSYSEQTQQNLKRLNEDVIDYDLL 914

Query: 2008 EDLVCYVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVASSDQK 1829
            EDLVC+VDETC +GAIL+FLPGV EI+ L+D+L ASYRF GPS+DW+LPLHSS+A+ +QK
Sbjct: 915  EDLVCHVDETCDKGAILIFLPGVVEIHTLLDRLAASYRFAGPSSDWLLPLHSSIAADEQK 974

Query: 1828 KVFLRPPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISXX 1649
            KVFL PP  IRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWIS  
Sbjct: 975  KVFLNPPDGIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRA 1034

Query: 1648 XXXXXXXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHIKP 1469
                      RVKPGIC+ LYTRHRFEKLMRP+QVPEMLRMPLVELCLQIKLLSLG IKP
Sbjct: 1035 NAKQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGQIKP 1094

Query: 1468 FLSKALEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYGGIFG 1289
            FLSKALEPP+EEAMNSAIS+LYEVGA+EGDE LTPLG+HLAKLPVDVLIGKM+LYGGIFG
Sbjct: 1095 FLSKALEPPKEEAMNSAISLLYEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFG 1154

Query: 1288 CLSPILSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHLLMMI 1109
            CLSPILSISA LSYKSPF+YPKDE+QNVER          D S D  D  RQSDHLLMM 
Sbjct: 1155 CLSPILSISACLSYKSPFLYPKDEKQNVERAKLALLSEKLDESSDLNDAERQSDHLLMMA 1214

Query: 1108 AYKKWEKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKTYQID 929
            AY+KWEKI REKG+KAAQ FC  YFLSSSVM MIRDMR+QFGTLLADIG I LPK Y+  
Sbjct: 1215 AYRKWEKIFREKGVKAAQRFCKMYFLSSSVMSMIRDMRIQFGTLLADIGFINLPKNYKSG 1274

Query: 928  RRKRENLDCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLKQSTG 749
             +++ENLD W SD SQPFN +++H++++KAILCAGLYPNVAATE GI  VAL  LK +  
Sbjct: 1275 GKRKENLDGWFSDYSQPFNIHSHHSAVVKAILCAGLYPNVAATELGITGVALSRLKLNP- 1333

Query: 748  LASKGHQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSPYSIL 569
             A+KGH VWYDGRREVHIHPSSINSSLK F+H FLVFLEKVETNKVFLRDTTI+SP+SIL
Sbjct: 1334 -ATKGHPVWYDGRREVHIHPSSINSSLKSFQHLFLVFLEKVETNKVFLRDTTIISPFSIL 1392

Query: 568  LFGGFINVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAXXXXXX 389
            LFGG IN+ HQ+G+V IDGWLKL+APAQTAVL KELR  LHSIL+ELIRKPE+A      
Sbjct: 1393 LFGGLINIQHQSGLVVIDGWLKLTAPAQTAVLCKELRSALHSILKELIRKPENA--TIVD 1450

Query: 388  XXXXXSIIHLLLEEDKP 338
                 S+IHLLLEEDKP
Sbjct: 1451 NEVVKSMIHLLLEEDKP 1467


>ref|XP_011028322.1| PREDICTED: ATP-dependent RNA helicase Dhx29 isoform X1 [Populus
            euphratica]
          Length = 1455

 Score = 1852 bits (4797), Expect = 0.0
 Identities = 963/1393 (69%), Positives = 1101/1393 (79%), Gaps = 11/1393 (0%)
 Frame = -1

Query: 4480 IYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLKFXXXXXXXXXXXX 4301
            IYE LSCEGF+ND IELALS+LK+ ATFE ALDWLCLNL GNELPLKF            
Sbjct: 77   IYEKLSCEGFSNDHIELALSSLKDNATFETALDWLCLNLAGNELPLKFSGGTSLNSDRGS 136

Query: 4300 SVGVILTAREDWTPSVDQSST--PNEEEPGISIRTKGRWDDE-----TLDSCQSSQADWI 4142
             V V+ TAREDW P VD S      EEE  + +R K RWD+E      LD  Q SQADWI
Sbjct: 137  -VSVVSTAREDWVPYVDSSRRIEGEEEEQRVLVRAKARWDEEDGDGNVLDFRQPSQADWI 195

Query: 4141 KRYVEQEEEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVKAKERGDKKS 3962
            ++YVEQ+EE+E S TWED  VD   T K  +PR+YDVIA+EY   RLEA KAKE+GDKKS
Sbjct: 196  RQYVEQQEEEE-SKTWEDDSVDGSFTNKDPQPRTYDVIAKEYHAVRLEATKAKEKGDKKS 254

Query: 3961 QEQAGHIIRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSEAKECSIV 3782
            QEQAGH IRK+KQE+SALGLS D+L  +F H+      SE    +ST  E  EA     V
Sbjct: 255  QEQAGHAIRKLKQEMSALGLSLDLLEQDFGHQHV----SEDMFSTSTPCEHLEAITSLDV 310

Query: 3781 EGGLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVELGNFFLE 3602
            EG         ES + E+ +E S           S V ++ +I +EE   DVE+G+FF++
Sbjct: 311  EGDSTI----VESIVDENDLESSSSIGFPSNLVPSSVPLKGEIVSEELE-DVEIGDFFID 365

Query: 3601 DGPSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLCQKSGWE 3422
            D  SN+ L P + ELQ++EKMRE+ SEKNLEKLEGIW+KGDP KIPKA LHQLCQKSGWE
Sbjct: 366  DASSNDALAPGILELQKREKMRELCSEKNLEKLEGIWKKGDPQKIPKAVLHQLCQKSGWE 425

Query: 3421 APXXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDAQNKVAA 3242
            AP             Y VS+LR+ASGRGKSRKAGGL TLQLP+ D+T ESAEDAQN+VAA
Sbjct: 426  APKFNKVLERELRFSYAVSILRKASGRGKSRKAGGLITLQLPDQDETFESAEDAQNRVAA 485

Query: 3241 FALYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGADGSNAT 3062
            FAL+ LFPDLP+HL I  PY+SLVLQWK            EDRRA FVD LL ADGS+  
Sbjct: 486  FALHQLFPDLPIHLAIINPYSSLVLQWKRGETSKRVEDSVEDRRAGFVDLLLKADGSS-- 543

Query: 3061 SSADVMNNIISEEFQQIHYEENENSAVAEVHNHK----EGESSYLRQEQENKMKMQKYKD 2894
            SSA        E  +    EE ++S   +  + K    + ESSYLRQEQE+K K++KYK+
Sbjct: 544  SSAVDATTSSQETLKITDIEETKDSGADKKVDRKKYAKDAESSYLRQEQESKRKLKKYKE 603

Query: 2893 MLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVESGLGGHCNI 2714
            ML +RAALPIA LK DIL +LKEN+VLVVCGETGSGKTTQVPQFILDDM+ESG GG+CNI
Sbjct: 604  MLCSRAALPIAGLKVDILQMLKENDVLVVCGETGSGKTTQVPQFILDDMIESGHGGNCNI 663

Query: 2713 ICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLFCTTGILLRK 2534
            ICTQPRRIAAISVAERVADERCEPSPG+ GSLVGYQVRLDSARN+KTKLLFCTTGILLRK
Sbjct: 664  ICTQPRRIAAISVAERVADERCEPSPGAVGSLVGYQVRLDSARNEKTKLLFCTTGILLRK 723

Query: 2533 IAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVILMSATVDSHL 2354
            +AGDR+L+G+THVIVDEVHERSLLGDFLLIVLKNL+EKQS+ +TPKLKVILMSATVDS+L
Sbjct: 724  LAGDRSLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSSQDTPKLKVILMSATVDSNL 783

Query: 2353 FSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTKDKSSAVNNR 2174
            FS+YF  CPV+TAQGRTHPVT YF+ED+YE INY LASD+ A+LR+ETS  DKS  V+N 
Sbjct: 784  FSRYFGQCPVLTAQGRTHPVTNYFLEDIYEYINYNLASDAPAALRYETSAIDKSGPVDNH 843

Query: 2173 RGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVIDYDLLEDLVC 1994
            RGKKNLVLSAWGDDS LSE+ INP+Y+  +YQ+YSEQT++NLK++NE++IDYDLLEDL+C
Sbjct: 844  RGKKNLVLSAWGDDSQLSEDCINPHYISTSYQTYSEQTQKNLKRLNEEIIDYDLLEDLIC 903

Query: 1993 YVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVASSDQKKVFLR 1814
            YVDETC EGAIL+FLPGVSEIYML+D+L ASYRFGGPS+DW+LPLHSS+AS DQKKVFL 
Sbjct: 904  YVDETCGEGAILIFLPGVSEIYMLLDRLVASYRFGGPSSDWVLPLHSSIASKDQKKVFLW 963

Query: 1813 PPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISXXXXXXX 1634
            PP NIRKVIIATNIAETS+TIDDVVYVIDCGKHKENRYNPQKKL+SMVEDWIS       
Sbjct: 964  PPDNIRKVIIATNIAETSLTIDDVVYVIDCGKHKENRYNPQKKLTSMVEDWISQANARQR 1023

Query: 1633 XXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHIKPFLSKA 1454
                 RVKPGIC+ LYTRHRFEKLMRP+QVPEMLRMPLVEL LQIKLLSLGHIKPFLSKA
Sbjct: 1024 RGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELSLQIKLLSLGHIKPFLSKA 1083

Query: 1453 LEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYGGIFGCLSPI 1274
            LEPPREEAM SAIS+LYEVGALEGDE LTPLG+HLAKLPVDVLIGKM+LYG IFGCLSPI
Sbjct: 1084 LEPPREEAMTSAISLLYEVGALEGDEQLTPLGHHLAKLPVDVLIGKMLLYGAIFGCLSPI 1143

Query: 1273 LSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHLLMMIAYKKW 1094
            LSISAFLSYKSPF+YPKDE+QNVER          DGS DS    R SDHLLMM+AYKKW
Sbjct: 1144 LSISAFLSYKSPFVYPKDEKQNVERAKLALLADKIDGSNDSNYNDRLSDHLLMMVAYKKW 1203

Query: 1093 EKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKTYQIDRRKRE 914
            EKI+ E+G KAAQ FC +YFLSSSVM MIRDMR QFGTLLADIGLI +PK+YQ  R K+E
Sbjct: 1204 EKILSERGFKAAQQFCATYFLSSSVMHMIRDMRTQFGTLLADIGLISIPKSYQAGRMKKE 1263

Query: 913  NLDCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLKQSTGLASKG 734
            NLD WLS+ SQPFN Y++H+S++KAILCAGLYPNVAATE GI    L  LKQS+    KG
Sbjct: 1264 NLDSWLSEKSQPFNMYSHHSSLVKAILCAGLYPNVAATEHGITAATLNGLKQSSRPGKKG 1323

Query: 733  HQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSPYSILLFGGF 554
            H +WYDGRREVHIHPSS+N ++K F HPFLVFLEKVETNKVFLRDTTI+SP+SILLFGG 
Sbjct: 1324 HPIWYDGRREVHIHPSSVNCNVKAFPHPFLVFLEKVETNKVFLRDTTIISPFSILLFGGA 1383

Query: 553  INVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAXXXXXXXXXXX 374
            IN+ HQTG++ IDGWLKL+A AQ AVLFKELR TLH++L+ELIRKPE+A           
Sbjct: 1384 INIQHQTGLLTIDGWLKLTASAQYAVLFKELRSTLHALLKELIRKPENA--TLVDNEVVK 1441

Query: 373  SIIHLLLEEDKPR 335
            S+I LLL+EDKP+
Sbjct: 1442 SMIQLLLDEDKPQ 1454


>gb|KJB16163.1| hypothetical protein B456_002G216000 [Gossypium raimondii]
          Length = 1459

 Score = 1845 bits (4780), Expect = 0.0
 Identities = 952/1372 (69%), Positives = 1090/1372 (79%), Gaps = 16/1372 (1%)
 Frame = -1

Query: 4480 IYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLKFXXXXXXXXXXXX 4301
            +YE LSCEGF+NDQIELALS+LK+GATFE ALDWLCLNLP NELPLKF            
Sbjct: 87   LYEKLSCEGFSNDQIELALSSLKDGATFETALDWLCLNLPRNELPLKFSSGISLHSDGGG 146

Query: 4300 SVGVILTAREDWTPSVDQSSTPNEEEPGISIRTKGRWDDETLDSCQSSQADWIKRYVEQE 4121
            S+ VI   REDWTPSVD S+   E   G+S+RTK   D+ +L+ CQ SQADWI++Y+EQ+
Sbjct: 147  SISVISVEREDWTPSVDASTRIKENLHGLSVRTKSSEDENSLNMCQPSQADWIRQYMEQQ 206

Query: 4120 EEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVKAKERGDKKSQEQAGHI 3941
            EEDE S TWED   DEGS +++S PR YDVIA+EY  ARLEA KAKE+ DK  QE+AG  
Sbjct: 207  EEDE-SKTWEDEASDEGSAEEVSGPRPYDVIAKEYHAARLEATKAKEKKDKNGQEKAGSR 265

Query: 3940 IRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSEA-----KECS---- 3788
            IRK+KQELSALGLS+ +LAS+F HE+A+ + SE T+ SS   E  E       EC+    
Sbjct: 266  IRKLKQELSALGLSDAVLASDFLHERASASVSEGTVTSSMPEEQPEMISLGDAECNSAAC 325

Query: 3787 IVEGGLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVELGNFF 3608
            ++  G+A G   +  T           KEL  K   S +  +EK  AE  S D+E+G+FF
Sbjct: 326  VITSGVATGSVNDTET----------SKELSTKSIPSLLPTQEKGDAENMSEDLEIGDFF 375

Query: 3607 LEDGPSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLCQKSG 3428
            LED   N+ L  +V +L+++EKM+E+ SEKNLEKL+GIW+KG+  KIPKA LHQLCQ+SG
Sbjct: 376  LEDSSINDVLASEVLKLRKQEKMKELYSEKNLEKLDGIWKKGESKKIPKAVLHQLCQRSG 435

Query: 3427 WEAPXXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDAQNKV 3248
            WEAP             Y+VSVLR+ASGRGKSRKAGGL TLQLPN  +  ESAED+QN+V
Sbjct: 436  WEAPKFDKMPAKGKSFAYSVSVLRKASGRGKSRKAGGLITLQLPNEQEAFESAEDSQNRV 495

Query: 3247 AAFALYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGADGSN 3068
            AAFAL  LFPDLP  L++TEPY+SL+ QWK            EDRRA FVD LL  + S 
Sbjct: 496  AAFALCQLFPDLPTQLIVTEPYSSLIFQWKGGESLTKIEDNEEDRRAGFVDRLLRDEDSR 555

Query: 3067 ATSSADVMNNIISEEFQQIHYEENENSA------VAEVHNH-KEGESSYLRQEQENKMKM 2909
            + +     N     EFQ+   E+N+ S+      V E  +H KE ES YLRQE+E +   
Sbjct: 556  SKAPGHDTNESALNEFQKACLEDNKTSSSSVADPVYERKSHAKEMESVYLRQEEEKRKHT 615

Query: 2908 QKYKDMLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVESGLG 2729
            Q+YK+MLKTRAALP+A LK+DIL LLKENNVLVVCGETGSGKTTQVPQFILDDM+ESG G
Sbjct: 616  QRYKEMLKTRAALPVAGLKNDILQLLKENNVLVVCGETGSGKTTQVPQFILDDMIESGHG 675

Query: 2728 GHCNIICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLFCTTG 2549
            GHC+IICTQPRRIAAISVAERVADERCEPSPGS+ SLVGYQVRLD+ARN+KTKLLFCTTG
Sbjct: 676  GHCSIICTQPRRIAAISVAERVADERCEPSPGSNWSLVGYQVRLDNARNEKTKLLFCTTG 735

Query: 2548 ILLRKIAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVILMSAT 2369
            ILLRK+AGD+NLTGVTH+IVDEVHERSLLGDFLLIVLKNL+EKQS  NTPKLKVILMSAT
Sbjct: 736  ILLRKLAGDKNLTGVTHIIVDEVHERSLLGDFLLIVLKNLIEKQSVSNTPKLKVILMSAT 795

Query: 2368 VDSHLFSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTKDKSS 2189
            VDS LFS+YF  CPVITAQGRTHPVTT F+ED+YE INY LASDS ASLR ETST+D   
Sbjct: 796  VDSDLFSRYFGLCPVITAQGRTHPVTTCFLEDIYERINYHLASDSPASLRCETSTRDMRG 855

Query: 2188 AVNNRRGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVIDYDLL 2009
             VNN RGKKNLVLSAWGDDS+LSEEY+NP+Y   +YQSYSEQT+QNLK++NEDVIDYDLL
Sbjct: 856  PVNNHRGKKNLVLSAWGDDSLLSEEYVNPHYDSSSYQSYSEQTQQNLKRLNEDVIDYDLL 915

Query: 2008 EDLVCYVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVASSDQK 1829
            EDLVC+VDETC +GAIL+FLPGV EI+ L+D+L ASYRF GPS+DW+LPLHSS+A+ +QK
Sbjct: 916  EDLVCHVDETCDKGAILIFLPGVVEIHTLLDRLAASYRFAGPSSDWLLPLHSSIAADEQK 975

Query: 1828 KVFLRPPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISXX 1649
            KVFL PP  IRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWIS  
Sbjct: 976  KVFLNPPDGIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRA 1035

Query: 1648 XXXXXXXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHIKP 1469
                      RVKPGIC+ LYTRHRFEKLMRP+QVPEMLRMPLVELCLQIKLLSLG IKP
Sbjct: 1036 NAKQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGQIKP 1095

Query: 1468 FLSKALEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYGGIFG 1289
            FLSKALEPP+EEAMNSAIS+LYEVGA+EGDE LTPLG+HLAKLPVDVLIGKM+LYGGIFG
Sbjct: 1096 FLSKALEPPKEEAMNSAISLLYEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFG 1155

Query: 1288 CLSPILSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHLLMMI 1109
            CLSPILSISA LSYKSPF+YPKDE+QNVER          D S D  D  RQSDHLLMM 
Sbjct: 1156 CLSPILSISACLSYKSPFLYPKDEKQNVERAKLALLSEKLDESSDLNDAERQSDHLLMMA 1215

Query: 1108 AYKKWEKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKTYQID 929
            AY+KWEKI REKG+KAAQ FC  YFLSSSVM MIRDMR+QFGTLLADIG I LPK Y+  
Sbjct: 1216 AYRKWEKIFREKGVKAAQRFCKMYFLSSSVMSMIRDMRIQFGTLLADIGFINLPKNYKSG 1275

Query: 928  RRKRENLDCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLKQSTG 749
             +++ENLD W SD SQPFN +++H++++KAILCAGLYPNVAATE GI  VAL  LK +  
Sbjct: 1276 GKRKENLDGWFSDYSQPFNIHSHHSAVVKAILCAGLYPNVAATELGITGVALSRLKLNP- 1334

Query: 748  LASKGHQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSPYSIL 569
             A+KGH VWYDGRREVHIHPSSINSSLK F+H FLVFLEKVETNKVFLRDTTI+SP+SIL
Sbjct: 1335 -ATKGHPVWYDGRREVHIHPSSINSSLKSFQHLFLVFLEKVETNKVFLRDTTIISPFSIL 1393

Query: 568  LFGGFINVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPE 413
            LFGG IN+ HQ+G+V IDGWLKL+APAQTAVL KELR  LHSIL+ELIRKPE
Sbjct: 1394 LFGGLINIQHQSGLVVIDGWLKLTAPAQTAVLCKELRSALHSILKELIRKPE 1445


>ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1509

 Score = 1842 bits (4770), Expect = 0.0
 Identities = 939/1370 (68%), Positives = 1103/1370 (80%), Gaps = 12/1370 (0%)
 Frame = -1

Query: 4480 IYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLKFXXXXXXXXXXXX 4301
            +YE LSCEGF+NDQIELAL++LK+ ATFE+ALDWLC NLPGNELP+KF            
Sbjct: 70   VYEKLSCEGFSNDQIELALTSLKDNATFESALDWLCFNLPGNELPVKFSSGTSLYASEGS 129

Query: 4300 SVGVILTAREDWTPSVDQSSTPNEEEPGIS-IRTKGRWDDETLDSCQ----SSQADWIKR 4136
             V V+ TARED TP+V+ ++T  + +   + +R KGR DD+  +       SSQADWI++
Sbjct: 130  -VSVVSTAREDRTPTVNAANTEEDVQVQAAFVRIKGRRDDDDDNDTSLRQPSSQADWIRQ 188

Query: 4135 YVEQEEEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVKAKERGDKKSQE 3956
            Y+EQ+EE+E S TWED+ VD   T K+  PRSYD IA+EY  ARLEAVKAKE+GDK+SQE
Sbjct: 189  YMEQQEEEE-SETWEDYAVDGSFTDKVPVPRSYDAIAKEYYAARLEAVKAKEKGDKRSQE 247

Query: 3955 QAGHIIRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSEAKECSIVEG 3776
            Q+GHIIRK+KQELS+LGLS+D+LA EF HE  +    E    SS  HE   AK  S  E 
Sbjct: 248  QSGHIIRKLKQELSSLGLSDDVLAQEFVHEHTSAFVPEGISTSSMPHEQLLAKTSSDAES 307

Query: 3775 GLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVELGNFFLEDG 3596
             L F L +EE     + ME     E  V+   S V V+ KI  E+++ D+ELG FF+ED 
Sbjct: 308  NLVFVLPSEELPADPNDMESPSYMEFPVELAPSSVPVQGKIDLEDETADMELGGFFMEDA 367

Query: 3595 PSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLCQKSGWEAP 3416
             SNE L P+V ELQ+KEKM+++SSEKNLEKL+GIW+KGDP KIPKA LHQLCQKSGWEAP
Sbjct: 368  TSNEALPPEVLELQKKEKMKKLSSEKNLEKLDGIWKKGDPKKIPKAVLHQLCQKSGWEAP 427

Query: 3415 XXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDAQNKVAAFA 3236
                         Y+VS+LR+ASGRGKSRKAGGL TLQLP+ D+T ESAEDAQN++AAFA
Sbjct: 428  KFKKVHERRKGFSYSVSILRKASGRGKSRKAGGLITLQLPDQDETYESAEDAQNRIAAFA 487

Query: 3235 LYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGADGSNATSS 3056
            L+ LFPDLPVHL++++PY SL+LQWK            +DRRA FVD LL AD S AT+ 
Sbjct: 488  LHQLFPDLPVHLIVSDPYDSLILQWKEGESSSKVENTVDDRRAGFVDWLLNADESTATNH 547

Query: 3055 ADVMNNIISEEFQQIHYEENENSAVAEVHNHKEGES-------SYLRQEQENKMKMQKYK 2897
            A    N +SE  Q    EE +N + A      +GE+       SYLRQEQE K  + KY+
Sbjct: 548  A---TNRLSETAQNSQVEETKNLSDAVAVPVTQGENYTTDVENSYLRQEQEKKKNVLKYR 604

Query: 2896 DMLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVESGLGGHCN 2717
            ++LKTR ALPIA LK++IL +LKENN LVVCGETGSGKTTQVPQFILDDM+ESG GG CN
Sbjct: 605  EILKTRGALPIAGLKNEILQMLKENNCLVVCGETGSGKTTQVPQFILDDMIESGRGGQCN 664

Query: 2716 IICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLFCTTGILLR 2537
            IICTQPRRIAAISVAERVA ER EP PGS GSLVGYQVRLDSARN++TKLLFCTTGILLR
Sbjct: 665  IICTQPRRIAAISVAERVAYERYEPPPGSGGSLVGYQVRLDSARNERTKLLFCTTGILLR 724

Query: 2536 KIAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVILMSATVDSH 2357
            ++AGDRNL+G+THVIVDEVHERSLLGDFLLIVLK+L+EKQS   TPKLKVILMSATVDS 
Sbjct: 725  RLAGDRNLSGITHVIVDEVHERSLLGDFLLIVLKSLLEKQSDQGTPKLKVILMSATVDST 784

Query: 2356 LFSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTKDKSSAVNN 2177
            LFS YF +CPV++AQGRTHPVTTYF+ED+YESI+Y LASDS A+L  +TST  KS  VN+
Sbjct: 785  LFSNYFGHCPVLSAQGRTHPVTTYFLEDIYESIDYHLASDSPAALGLQTSTIAKSGPVND 844

Query: 2176 RRGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVIDYDLLEDLV 1997
            RRGKKNLVLS WGDDS+LSEE INP++V  NYQSYSEQT++NLK+++ED+IDYDLLEDL+
Sbjct: 845  RRGKKNLVLSGWGDDSLLSEEIINPHFVSSNYQSYSEQTQKNLKRLDEDIIDYDLLEDLI 904

Query: 1996 CYVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVASSDQKKVFL 1817
             +VD+T  EGAILVFLPG+SEI+ML+D+L ASYRFGGPS++W+LPLHSS+AS+DQKKVFL
Sbjct: 905  FHVDQTYGEGAILVFLPGMSEIHMLLDRLVASYRFGGPSSNWVLPLHSSIASTDQKKVFL 964

Query: 1816 RPPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISXXXXXX 1637
            RPP+NIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKL+SMVEDWIS      
Sbjct: 965  RPPENIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLTSMVEDWISQANARQ 1024

Query: 1636 XXXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHIKPFLSK 1457
                  RVKPGIC+ LYT HRF+KLMRP+QVPEMLRMPLVELCLQIK+LSLGHIKPFLSK
Sbjct: 1025 RRGRAGRVKPGICFCLYTCHRFKKLMRPYQVPEMLRMPLVELCLQIKILSLGHIKPFLSK 1084

Query: 1456 ALEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYGGIFGCLSP 1277
            ALEPPR+EAM SAIS+LYEVGA+EGDE LTPLG+HLAKLPVD+LIGKMMLYG IFGCLSP
Sbjct: 1085 ALEPPRDEAMTSAISLLYEVGAIEGDEELTPLGHHLAKLPVDLLIGKMMLYGAIFGCLSP 1144

Query: 1276 ILSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHLLMMIAYKK 1097
            ILSISAFLSYKSPF+YPKDE+QNVER          DGS D   G RQSDH++MM+AYKK
Sbjct: 1145 ILSISAFLSYKSPFMYPKDEKQNVERAKLALLTDKVDGSNDLNHGDRQSDHIIMMVAYKK 1204

Query: 1096 WEKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKTYQIDRRKR 917
            W+ I+ EKG+KAAQ FC++YFLS+SVM MIRDMR+QFGTLLADIG I LP+ YQI  R +
Sbjct: 1205 WDNILHEKGVKAAQQFCSTYFLSNSVMHMIRDMRIQFGTLLADIGFINLPQNYQILGRNK 1264

Query: 916  ENLDCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLKQSTGLASK 737
            E  D WLSD SQPFNTY++H+SI+KAILCAGLYPNVAAT++GI   A+ +LKQST  A K
Sbjct: 1265 EKFDGWLSDKSQPFNTYSHHSSIVKAILCAGLYPNVAATQQGIIATAINSLKQSTIPAIK 1324

Query: 736  GHQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSPYSILLFGG 557
            G+ VWYDGRREVHIHPSSINS +K F+HPFLVFLEKVETNKVFLRDTTI+SP+SILLFGG
Sbjct: 1325 GYPVWYDGRREVHIHPSSINSKVKAFQHPFLVFLEKVETNKVFLRDTTIISPFSILLFGG 1384

Query: 556  FINVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDA 407
            FINV HQTG+V +DGWLKL+APAQ AVLFKE R  +HS+L+EL++KP++A
Sbjct: 1385 FINVQHQTGLVTVDGWLKLTAPAQYAVLFKEFRSAMHSLLKELVQKPKNA 1434


>ref|XP_010065338.1| PREDICTED: ATP-dependent RNA helicase DHX36 [Eucalyptus grandis]
          Length = 1452

 Score = 1804 bits (4673), Expect = 0.0
 Identities = 938/1390 (67%), Positives = 1083/1390 (77%), Gaps = 9/1390 (0%)
 Frame = -1

Query: 4480 IYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLKFXXXXXXXXXXXX 4301
            +YE LSCEGF+NDQIE  LSALK  ATFEAALDWLCLNLPGNELPLKF            
Sbjct: 90   VYEKLSCEGFSNDQIERVLSALKGNATFEAALDWLCLNLPGNELPLKFSSGVSSLASTGG 149

Query: 4300 SVGVILTAREDWTPSVDQSSTPNEEEPGISIRTKGRWDDETLDSCQSSQADWIKRYVEQE 4121
            SV V+++AREDWTPSV+ SS  +E+    S++ KG  D+E+LDS + SQADWIKRYVEQ+
Sbjct: 150  SVNVLVSAREDWTPSVEPSSRVDEDAAKYSVKLKGNRDNESLDSHKQSQADWIKRYVEQQ 209

Query: 4120 EEDEMSTTWEDHLVDEGSTKKISEPRSYDVIAEEYRVARLEAVKAKERGDKKSQEQAGHI 3941
            EED  S TWEDH+ DEG  +KI EPRSYD IA EY  ARL+A +AKE+ DK SQE+AG I
Sbjct: 210  EEDS-SDTWEDHMADEGHLQKIREPRSYDDIAREYHAARLDASRAKEKRDKSSQEKAGLI 268

Query: 3940 IRKVKQELSALGLSEDILASEFQHEQAT-----CTASEATIFSSTSHELSEAKECSIVEG 3776
            IR +KQELSALGLSED+LA +  ++  +        SE     ST   LS +    +   
Sbjct: 269  IRNLKQELSALGLSEDMLAQDLAYKHVSENETGSLPSEHLETGSTHISLSSSSSVHV--- 325

Query: 3775 GLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVELGNFFLEDG 3596
                     + T V+ ++   GP++     T     ++E+   E +S +VELG  F +D 
Sbjct: 326  ---------DVTEVDGRVASPGPRDSLQTPTLPTPPIQEENTTEVESGEVELGGLFSDDA 376

Query: 3595 PSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLCQKSGWEAP 3416
            P NE +  +V  LQ++E+MRE+ SEKNLE   GIWRKGDP KIPKA LHQLCQKSGWEAP
Sbjct: 377  PENELVTSEVLRLQKQERMRELCSEKNLE---GIWRKGDPPKIPKAVLHQLCQKSGWEAP 433

Query: 3415 XXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDAQNKVAAFA 3236
                         Y VSV+R+ASGRGKSRKAGGL T QLPN  +  ESAED QNKVAA+A
Sbjct: 434  KFNKVLGESKVFSYAVSVVRKASGRGKSRKAGGLVTFQLPNQGEVLESAEDGQNKVAAYA 493

Query: 3235 LYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGADGSNATSS 3056
            L  LFPD+PVHL+ITEPYASLVLQWK            EDRRA FV+SLL      ++  
Sbjct: 494  LCHLFPDIPVHLMITEPYASLVLQWKEGEQSINSEASEEDRRADFVNSLL-----RSSEV 548

Query: 3055 ADVMNNIISEEFQQIHYEENENSAVAE----VHNHKEGESSYLRQEQENKMKMQKYKDML 2888
             DV +  + E+ Q+ H +EN+++   E    V   KE ESSYLR+E E++ KMQKYK+ML
Sbjct: 549  VDVTDRSLKEKSQEPHAKENKSAHSDEDTQRVELSKEAESSYLRKEHESRKKMQKYKEML 608

Query: 2887 KTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVESGLGGHCNIIC 2708
            +TRAALPIA+ K +IL LL+ENNVLVVCGETGSGKTTQVPQFILDDM+ESG GG+CNIIC
Sbjct: 609  RTRAALPIAASKSEILQLLRENNVLVVCGETGSGKTTQVPQFILDDMIESGSGGYCNIIC 668

Query: 2707 TQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLFCTTGILLRKIA 2528
            TQPRRIAAISVAERVA+ERCE SPGS GSL+GYQVRLDSARN+KTKLLFCTTGILLR I+
Sbjct: 669  TQPRRIAAISVAERVAEERCEGSPGSRGSLIGYQVRLDSARNEKTKLLFCTTGILLRSIS 728

Query: 2527 GDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVILMSATVDSHLFS 2348
            GD+NLTG+THVIVDEVHERSLLGDFLLIVLKNL+E+QS +N   LKVILMSATVDS LFS
Sbjct: 729  GDKNLTGITHVIVDEVHERSLLGDFLLIVLKNLLERQSAHNGRVLKVILMSATVDSALFS 788

Query: 2347 KYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTKDKSSAVNNRRG 2168
            +YF NCPVITAQGRTHPVTTYF+ED++E++ YRLASDS AS+R+ETS+KDK   V+N RG
Sbjct: 789  RYFGNCPVITAQGRTHPVTTYFLEDIHETLEYRLASDSPASIRWETSSKDKRG-VDNHRG 847

Query: 2167 KKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVIDYDLLEDLVCYV 1988
            KKNLVLSAWGD+S LSE+ +NPYY P NYQ+YSEQTR NL+K+NED+IDYDLLEDLVC+V
Sbjct: 848  KKNLVLSAWGDESQLSEDPVNPYYEPSNYQAYSEQTRLNLRKLNEDIIDYDLLEDLVCHV 907

Query: 1987 DETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVASSDQKKVFLRPP 1808
            DE C +GAIL+FLPGV EI+ LVDKLTASYRF GPS+DWILPLHSS+A +DQKK F +PP
Sbjct: 908  DEICGDGAILIFLPGVYEIHQLVDKLTASYRFSGPSSDWILPLHSSLAPNDQKKAFSQPP 967

Query: 1807 QNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISXXXXXXXXX 1628
             NIRKVI+ATNIAETSITIDDVVYVID GKHKENRYNPQKKL+SMVEDWIS         
Sbjct: 968  ANIRKVIVATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLTSMVEDWISQANSKQRRG 1027

Query: 1627 XXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHIKPFLSKALE 1448
               RVKPG C+ LYT HRFEKLMRPFQ PEMLRMPLVELCLQIKLLSLG+IK FL KALE
Sbjct: 1028 RAGRVKPGTCFCLYTHHRFEKLMRPFQAPEMLRMPLVELCLQIKLLSLGYIKSFLFKALE 1087

Query: 1447 PPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYGGIFGCLSPILS 1268
            PP+EEAM SAIS+LYEVGALEG+E LTPLGYHLAKLPVDVLIGKMMLYG IFGCLSPILS
Sbjct: 1088 PPKEEAMTSAISLLYEVGALEGNEELTPLGYHLAKLPVDVLIGKMMLYGAIFGCLSPILS 1147

Query: 1267 ISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHLLMMIAYKKWEK 1088
            ISA LSYKSPF+YPKDE+Q VER              D  +G RQSDHLLMM+ YKKWEK
Sbjct: 1148 ISAVLSYKSPFVYPKDEKQTVER----AKLALLTDKTDLNEGDRQSDHLLMMVVYKKWEK 1203

Query: 1087 IVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKTYQIDRRKRENL 908
            ++ EKG+KAAQ FCNSYFLSS VM MIRDMRVQFGTLLADIGLI  PK Y++  RK+ENL
Sbjct: 1204 VLNEKGVKAAQQFCNSYFLSSPVMFMIRDMRVQFGTLLADIGLISSPKNYRVMPRKKENL 1263

Query: 907  DCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLKQSTGLASKGHQ 728
            D WLSD SQPFN +++H S++KAILCAGLYPNVAATE G+A  AL  LKQSTGL SKG  
Sbjct: 1264 DSWLSDLSQPFNRHSHHPSVVKAILCAGLYPNVAATELGMAGAALSNLKQSTGLLSKGSL 1323

Query: 727  VWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSPYSILLFGGFIN 548
             WYDGRREV+IH +SINSSL+ F++PFLVFLEKVET KVFLRDTTIVSPYSILLFGG I+
Sbjct: 1324 AWYDGRREVYIHHTSINSSLRSFQYPFLVFLEKVETGKVFLRDTTIVSPYSILLFGGSID 1383

Query: 547  VHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAXXXXXXXXXXXSI 368
            + H++G++ IDGWLKL APAQTAV+FKELRL LHS+L+ LIR PED            SI
Sbjct: 1384 IQHKSGVLIIDGWLKLMAPAQTAVIFKELRLMLHSVLKSLIRNPEDT---SASNEVVSSI 1440

Query: 367  IHLLLEEDKP 338
            IHLLL+E  P
Sbjct: 1441 IHLLLQEQTP 1450


>ref|XP_009599886.1| PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 1441

 Score = 1772 bits (4590), Expect = 0.0
 Identities = 910/1387 (65%), Positives = 1088/1387 (78%), Gaps = 5/1387 (0%)
 Frame = -1

Query: 4480 IYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLKFXXXXXXXXXXXX 4301
            IYE LSCEGF++DQIE ALSALK  ATFEAALDWLCLNL GNELPLKF            
Sbjct: 71   IYEKLSCEGFSDDQIERALSALKERATFEAALDWLCLNLRGNELPLKFSSGTSQLNEGS- 129

Query: 4300 SVGVILTAREDWTPSVDQS--STPNEEEPGISIRTKGRWDDETLDSCQSSQADWIKRYVE 4127
             VG+I TAREDW PS D S     +E +P +S+  KGR D E+L + + +QADWI++Y+E
Sbjct: 130  -VGIISTAREDWVPSADSSVAEVKDERKPEVSVVPKGRSDSESLRTVERAQADWIRQYME 188

Query: 4126 QEEEDEMSTTWEDHLVDEGSTKKISEPR-SYDVIAEEYRVARLEAVKAKERGDKKSQEQA 3950
            Q+EEDE + +WE  L D+GS +++S  R S + I +E+  ARLEA+ AKERGDKKS EQ 
Sbjct: 189  QQEEDE-AESWESGLFDDGSLEQVSRKRRSVESIVQEFHNARLEAIHAKERGDKKSHEQV 247

Query: 3949 GHIIRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSEAKECSIVEGGL 3770
               IR++KQE+SALGL +DIL S   HE    +AS+  +  ++S +L    +   V    
Sbjct: 248  SRTIRRIKQEISALGLPDDILESA--HE----SASDYAVLDTSSEKL----DVDNVPSHN 297

Query: 3769 AFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVELGNFFLEDGPS 3590
                H +E  I E     S   E       SG  +++K+    ++ DVELG+F  E+  S
Sbjct: 298  FRTSHEQEIGIDEKVAVNSSSNEFTENSPSSG-PIDDKVAPGGEAEDVELGDFLFEE-VS 355

Query: 3589 NEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLCQKSGWEAPXX 3410
            +  +   + ELQ+KEKMRE+ S+KNLEKLEGIW+KGDP KIPKA LHQLCQ+SGWEAP  
Sbjct: 356  SADVSSTILELQKKEKMRELCSQKNLEKLEGIWKKGDPQKIPKAFLHQLCQRSGWEAPKY 415

Query: 3409 XXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDAQNKVAAFALY 3230
                       YTVS++R+ASGRGKSRKAGGL T++LP+ D TS + EDAQN+VAA+AL+
Sbjct: 416  AKISGKGNNSHYTVSIMRKASGRGKSRKAGGLVTIELPSRDHTSSTTEDAQNRVAAYALH 475

Query: 3229 SLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGADGSNATSSAD 3050
             LFPDLPVH+ ITEPYASL+LQW+             +RRA FVDSLL A GS   +  D
Sbjct: 476  RLFPDLPVHMPITEPYASLILQWEEGDSVIDIVDDQVERRAYFVDSLLDASGSGNITHCD 535

Query: 3049 VMNNIISEEFQQIHYEENENSAV--AEVHNHKEGESSYLRQEQENKMKMQKYKDMLKTRA 2876
            V NN   E+F + H  E++ +    A+ +  KE ES  L++EQE + K++KY++MLK+RA
Sbjct: 536  VSNNASEEKFLEPHATEDKTAIADFADSNPSKEAESFSLKKEQEGRKKLKKYQEMLKSRA 595

Query: 2875 ALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVESGLGGHCNIICTQPR 2696
            ALPIA LK  ILH L+EN+VLV+CGETG GKTTQVPQFILDDM+ESG GGHCNIICTQPR
Sbjct: 596  ALPIADLKGKILHSLEENDVLVICGETGCGKTTQVPQFILDDMIESGRGGHCNIICTQPR 655

Query: 2695 RIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLFCTTGILLRKIAGDRN 2516
            RIAAISVAERVADERCE SPGSS SLVGYQVRLDSARN++TKLLFCTTGILLR  +G++N
Sbjct: 656  RIAAISVAERVADERCESSPGSSDSLVGYQVRLDSARNERTKLLFCTTGILLRMFSGNKN 715

Query: 2515 LTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVILMSATVDSHLFSKYFS 2336
            L GV+H+IVDEVHERSLLGDFLLIVLK+L++KQS   T KLKVILMSATVDSHLFS YF 
Sbjct: 716  LAGVSHIIVDEVHERSLLGDFLLIVLKSLIQKQSALCTAKLKVILMSATVDSHLFSHYFG 775

Query: 2335 NCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTKDKSSAVNNRRGKKNL 2156
            +CPVITAQGRTHPV+TYF+ED+YES NYRLASDS ASL +  ST++K++ + N RGKKNL
Sbjct: 776  HCPVITAQGRTHPVSTYFLEDIYESTNYRLASDSPASLSYGISTREKNAPIGNHRGKKNL 835

Query: 2155 VLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVIDYDLLEDLVCYVDETC 1976
            VLS WGD+S+LSEEYINPYY P NYQ+YSEQT++NL+K+NE++IDYDLLEDLVCY+DET 
Sbjct: 836  VLSGWGDESLLSEEYINPYYDPSNYQNYSEQTQKNLRKLNEEIIDYDLLEDLVCYIDETY 895

Query: 1975 SEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVASSDQKKVFLRPPQNIR 1796
             EG+ILVFLPGV EI+ L D+L+ S++F G S++WILPLHSSVAS DQKKVF+RPP+NIR
Sbjct: 896  PEGSILVFLPGVGEIHTLYDRLSVSFQFSGQSSEWILPLHSSVASEDQKKVFMRPPENIR 955

Query: 1795 KVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISXXXXXXXXXXXXR 1616
            KVIIATNIAETSITIDDVVYV+DCGKHKENRYNP+KKLSSMVEDWIS            R
Sbjct: 956  KVIIATNIAETSITIDDVVYVVDCGKHKENRYNPKKKLSSMVEDWISQANARQRRGRAGR 1015

Query: 1615 VKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHIKPFLSKALEPPRE 1436
            VKPGIC+ LYT +R+EKLMRP+Q+PEMLRMPLVELCLQIKLLSLG IK FLS ALEPP++
Sbjct: 1016 VKPGICFCLYTSYRYEKLMRPYQIPEMLRMPLVELCLQIKLLSLGSIKLFLSMALEPPKD 1075

Query: 1435 EAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYGGIFGCLSPILSISAF 1256
            EA+ SAIS+LYEVGA+EGDE LTPLGYHLA+LPVDVL+GKM+LYGG+FGCLSPILSISAF
Sbjct: 1076 EAIASAISLLYEVGAVEGDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISAF 1135

Query: 1255 LSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHLLMMIAYKKWEKIVRE 1076
            LSYKSPF+YPKDERQNVER           G  DS  G+ QSDHLLMM+AYKKWEKI+RE
Sbjct: 1136 LSYKSPFVYPKDERQNVERAKLALLSDKLGGETDSGSGNWQSDHLLMMVAYKKWEKILRE 1195

Query: 1075 KGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKTYQIDRRKRENLDCWL 896
             G+KAA+ FC+SYFLSSSVM MIRDMR+QFGTLLADIG I +PK  +ID +K+E LD WL
Sbjct: 1196 NGVKAAKQFCSSYFLSSSVMYMIRDMRIQFGTLLADIGFINIPKKSEIDWKKKEKLDSWL 1255

Query: 895  SDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLKQSTGLASKGHQVWYD 716
            SD SQPFNT +NH+SI+KAILCAGLYPNV+A E+GIA  ALG LKQS GL++K +  WYD
Sbjct: 1256 SDISQPFNTNSNHSSILKAILCAGLYPNVSAREEGIATTALGNLKQSAGLSAKSNPAWYD 1315

Query: 715  GRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSPYSILLFGGFINVHHQ 536
            GRREVHIHPSSINS+LK+F++PF+VFLEKVETNKVFLRDTT++SPY+ILLFGG IN+ HQ
Sbjct: 1316 GRREVHIHPSSINSNLKDFQYPFIVFLEKVETNKVFLRDTTVISPYTILLFGGPINIQHQ 1375

Query: 535  TGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAXXXXXXXXXXXSIIHLL 356
            TG V IDGWL+++APAQTAVLFKELRLTLH IL+ELIR P+             SI+ LL
Sbjct: 1376 TGRVTIDGWLEVAAPAQTAVLFKELRLTLHDILKELIRNPQ--VSLVTDNEVLRSIVQLL 1433

Query: 355  LEEDKPR 335
            LEEDK R
Sbjct: 1434 LEEDKQR 1440


>ref|XP_009785200.1| PREDICTED: ATP-dependent RNA helicase DHX36 isoform X1 [Nicotiana
            sylvestris]
          Length = 1443

 Score = 1771 bits (4588), Expect = 0.0
 Identities = 916/1388 (65%), Positives = 1089/1388 (78%), Gaps = 6/1388 (0%)
 Frame = -1

Query: 4480 IYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLKFXXXXXXXXXXXX 4301
            IYE LSCEGF++DQIE ALSALK  ATFEAALDWLCLNL GNELPLKF            
Sbjct: 71   IYEKLSCEGFSDDQIERALSALKERATFEAALDWLCLNLRGNELPLKFSSGTSQLNEGS- 129

Query: 4300 SVGVILTAREDWTPSVDQS--STPNEEEPGISIRTKGRWDDETLDSCQSSQADWIKRYVE 4127
             VGVI TAREDW PS D S     +E +P +S+  KGR D E+L + + +QADWI++Y+E
Sbjct: 130  -VGVISTAREDWVPSADSSVAEVKDERKPEVSVVPKGRSDSESLRTVERAQADWIRQYME 188

Query: 4126 QEEEDEMSTTWEDHLVDEGSTKKISEPR-SYDVIAEEYRVARLEAVKAKERGDKKSQEQA 3950
            Q+EEDE + +WE  L D+GS ++ S  R S + I +E+  ARLEA+ AKERGDKKS EQA
Sbjct: 189  QQEEDE-AESWESGLFDDGSLEQASRKRRSIESIVQEFHNARLEAIHAKERGDKKSHEQA 247

Query: 3949 GHIIRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSEAKECSIVEGGL 3770
               IRK+KQE+SALGL +DIL S   HE    +AS+  +  ++S +L      S      
Sbjct: 248  SRTIRKIKQEISALGLPDDILESA--HE----SASDHAVLDTSSEKLDVDNVPS--HNFR 299

Query: 3769 AFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVELGNFFLEDGPS 3590
                H +E  I E     S   E       SG  +++K+    ++ DVELG+F L D  S
Sbjct: 300  TSTTHEQEIGIDEKVAVNSSSNEFTENNPSSG-PIDDKVAPGGEAEDVELGDF-LFDEVS 357

Query: 3589 NEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLCQKSGWEAPXX 3410
            +  +   + ELQ+KEKMRE+ S+KNLEKLEGIW+KGDP KIPKA LHQLCQ+SGWEAP  
Sbjct: 358  SADVSSTILELQKKEKMRELCSQKNLEKLEGIWKKGDPQKIPKAFLHQLCQRSGWEAPKY 417

Query: 3409 XXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDAQNKVAAFALY 3230
                       YTVS++R+ASGRGKSRKAGGL T++LP+ D TS + EDAQN+VAA+AL+
Sbjct: 418  AKIPGKGNNSHYTVSIMRKASGRGKSRKAGGLVTIELPSQDHTSSTTEDAQNRVAAYALH 477

Query: 3229 SLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGADGSNATSSAD 3050
             LFPDLPVH+ ITEPYASL+LQW+             +RRA FVDSLL   GS   +  D
Sbjct: 478  RLFPDLPVHMPITEPYASLILQWEEGDSVIDIVDDQVERRAYFVDSLLDTSGSENITHCD 537

Query: 3049 VMNNIISEEFQQIHYEENENSAVAEVHNH---KEGESSYLRQEQENKMKMQKYKDMLKTR 2879
            V NN   E+F + H  E++ +A+A+  +    KE ES  L++EQE + K++KY++MLK+R
Sbjct: 538  VSNNASDEKFLEPHATEDK-TAIADFTDRNPSKEAESFSLKKEQEGRKKLKKYQEMLKSR 596

Query: 2878 AALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVESGLGGHCNIICTQP 2699
            AALPIA LK  ILH L+EN+VLV+CGETG GKTTQVPQFILDDM+ESG GGHCNIICTQP
Sbjct: 597  AALPIADLKGKILHSLEENDVLVICGETGCGKTTQVPQFILDDMIESGCGGHCNIICTQP 656

Query: 2698 RRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLFCTTGILLRKIAGDR 2519
            RRIAAISVAERVADERCE SPGSS SLVGYQVRLDSARN++TKLLFCTTGILLR  +G++
Sbjct: 657  RRIAAISVAERVADERCESSPGSSDSLVGYQVRLDSARNERTKLLFCTTGILLRMFSGNK 716

Query: 2518 NLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVILMSATVDSHLFSKYF 2339
            NL GV+H+IVDEVHERSLLGDFLLIVLK+L++KQS   T KLKVILMSATVDSHLFS YF
Sbjct: 717  NLAGVSHIIVDEVHERSLLGDFLLIVLKSLIQKQSALGTAKLKVILMSATVDSHLFSHYF 776

Query: 2338 SNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTKDKSSAVNNRRGKKN 2159
             +CPVITAQGRTHPV+TYF+ED+YES NYRLASDS ASL + TST++K++ + N RGKKN
Sbjct: 777  GHCPVITAQGRTHPVSTYFLEDIYESTNYRLASDSPASLSYGTSTREKNAPIGNHRGKKN 836

Query: 2158 LVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVIDYDLLEDLVCYVDET 1979
            LVLS WGD+S+LSEEYINPYY P NYQ+YSEQT++NL+K+NE++IDYDLLEDLVCY+DET
Sbjct: 837  LVLSGWGDESLLSEEYINPYYDPSNYQNYSEQTQKNLRKLNEEIIDYDLLEDLVCYIDET 896

Query: 1978 CSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVASSDQKKVFLRPPQNI 1799
              EGAILVFLPGV EI+ L+D+L+ S++F G S++WILPLHSSVAS DQKKVF+RPP+NI
Sbjct: 897  YPEGAILVFLPGVGEIHTLLDRLSVSFQFSGQSSEWILPLHSSVASEDQKKVFMRPPENI 956

Query: 1798 RKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISXXXXXXXXXXXX 1619
            RKVIIATNIAETSITIDDVVYV+DCGKHKENRYNP+KKLSSMVEDWIS            
Sbjct: 957  RKVIIATNIAETSITIDDVVYVVDCGKHKENRYNPKKKLSSMVEDWISQANARQRRGRAG 1016

Query: 1618 RVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHIKPFLSKALEPPR 1439
            RVKPGIC+ LYT +R+EKLMRP+Q+PEMLRMPLVELCLQIKLLSLG IK FLS ALEPP+
Sbjct: 1017 RVKPGICFCLYTSYRYEKLMRPYQIPEMLRMPLVELCLQIKLLSLGSIKLFLSMALEPPK 1076

Query: 1438 EEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYGGIFGCLSPILSISA 1259
            +EA+ SAIS+LYEVGA+EGDE LTPLGYHLA+LPVDVL+GKM+LYGG+FGCLSPILSISA
Sbjct: 1077 DEAIASAISLLYEVGAVEGDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISA 1136

Query: 1258 FLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHLLMMIAYKKWEKIVR 1079
            FLSYKSPF+YPKDERQNVER           G  DS  G+ QSDHLLMM+AYKKWEKI+R
Sbjct: 1137 FLSYKSPFVYPKDERQNVERAKLALLSDKLGGETDSGSGNWQSDHLLMMVAYKKWEKILR 1196

Query: 1078 EKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKTYQIDRRKRENLDCW 899
            E G+KAA+ FC+S FLSSSVM MIRDMR+QFGTLLADIGLI +PK  QID +K+E LD W
Sbjct: 1197 ENGVKAAKQFCSSNFLSSSVMYMIRDMRIQFGTLLADIGLINIPKKSQIDWKKKEKLDSW 1256

Query: 898  LSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLKQSTGLASKGHQVWY 719
            LSD SQPFNT +NH+SI+KAILCAGLYPNV+A E+GIA  ALG LKQ+ GL++K +  WY
Sbjct: 1257 LSDISQPFNTNSNHSSILKAILCAGLYPNVSAREEGIATTALGNLKQNAGLSAKSNPAWY 1316

Query: 718  DGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSPYSILLFGGFINVHH 539
            DGRREVHIHPSSINS+LK+F++PF+VFLEKVETNKVFLRDTT++SPY+ILLFGG IN+ H
Sbjct: 1317 DGRREVHIHPSSINSNLKDFQYPFIVFLEKVETNKVFLRDTTVISPYTILLFGGPINIQH 1376

Query: 538  QTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAXXXXXXXXXXXSIIHL 359
            QTG V IDGWL+++APAQTAVLFKELR TLH IL+ELIR P+             SII L
Sbjct: 1377 QTGRVTIDGWLEVAAPAQTAVLFKELRQTLHDILKELIRNPQ--VSRVNDNEVLRSIIQL 1434

Query: 358  LLEEDKPR 335
            LLEEDK R
Sbjct: 1435 LLEEDKQR 1442


>ref|XP_009599885.1| PREDICTED: ATP-dependent RNA helicase DHX36 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 1460

 Score = 1761 bits (4560), Expect = 0.0
 Identities = 910/1406 (64%), Positives = 1088/1406 (77%), Gaps = 24/1406 (1%)
 Frame = -1

Query: 4480 IYENLSCEGFTNDQIELALSALK-------------------NGATFEAALDWLCLNLPG 4358
            IYE LSCEGF++DQIE ALSALK                     ATFEAALDWLCLNL G
Sbjct: 71   IYEKLSCEGFSDDQIERALSALKVLIKKMSPLTNNFLYMITKERATFEAALDWLCLNLRG 130

Query: 4357 NELPLKFXXXXXXXXXXXXSVGVILTAREDWTPSVDQS--STPNEEEPGISIRTKGRWDD 4184
            NELPLKF             VG+I TAREDW PS D S     +E +P +S+  KGR D 
Sbjct: 131  NELPLKFSSGTSQLNEGS--VGIISTAREDWVPSADSSVAEVKDERKPEVSVVPKGRSDS 188

Query: 4183 ETLDSCQSSQADWIKRYVEQEEEDEMSTTWEDHLVDEGSTKKISEPR-SYDVIAEEYRVA 4007
            E+L + + +QADWI++Y+EQ+EEDE + +WE  L D+GS +++S  R S + I +E+  A
Sbjct: 189  ESLRTVERAQADWIRQYMEQQEEDE-AESWESGLFDDGSLEQVSRKRRSVESIVQEFHNA 247

Query: 4006 RLEAVKAKERGDKKSQEQAGHIIRKVKQELSALGLSEDILASEFQHEQATCTASEATIFS 3827
            RLEA+ AKERGDKKS EQ    IR++KQE+SALGL +DIL S   HE    +AS+  +  
Sbjct: 248  RLEAIHAKERGDKKSHEQVSRTIRRIKQEISALGLPDDILESA--HE----SASDYAVLD 301

Query: 3826 STSHELSEAKECSIVEGGLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPA 3647
            ++S +L    +   V        H +E  I E     S   E       SG  +++K+  
Sbjct: 302  TSSEKL----DVDNVPSHNFRTSHEQEIGIDEKVAVNSSSNEFTENSPSSG-PIDDKVAP 356

Query: 3646 EEDSIDVELGNFFLEDGPSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKI 3467
              ++ DVELG+F  E+  S+  +   + ELQ+KEKMRE+ S+KNLEKLEGIW+KGDP KI
Sbjct: 357  GGEAEDVELGDFLFEE-VSSADVSSTILELQKKEKMRELCSQKNLEKLEGIWKKGDPQKI 415

Query: 3466 PKASLHQLCQKSGWEAPXXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNAD 3287
            PKA LHQLCQ+SGWEAP             YTVS++R+ASGRGKSRKAGGL T++LP+ D
Sbjct: 416  PKAFLHQLCQRSGWEAPKYAKISGKGNNSHYTVSIMRKASGRGKSRKAGGLVTIELPSRD 475

Query: 3286 DTSESAEDAQNKVAAFALYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRA 3107
             TS + EDAQN+VAA+AL+ LFPDLPVH+ ITEPYASL+LQW+             +RRA
Sbjct: 476  HTSSTTEDAQNRVAAYALHRLFPDLPVHMPITEPYASLILQWEEGDSVIDIVDDQVERRA 535

Query: 3106 SFVDSLLGADGSNATSSADVMNNIISEEFQQIHYEENENSAV--AEVHNHKEGESSYLRQ 2933
             FVDSLL A GS   +  DV NN   E+F + H  E++ +    A+ +  KE ES  L++
Sbjct: 536  YFVDSLLDASGSGNITHCDVSNNASEEKFLEPHATEDKTAIADFADSNPSKEAESFSLKK 595

Query: 2932 EQENKMKMQKYKDMLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILD 2753
            EQE + K++KY++MLK+RAALPIA LK  ILH L+EN+VLV+CGETG GKTTQVPQFILD
Sbjct: 596  EQEGRKKLKKYQEMLKSRAALPIADLKGKILHSLEENDVLVICGETGCGKTTQVPQFILD 655

Query: 2752 DMVESGLGGHCNIICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKT 2573
            DM+ESG GGHCNIICTQPRRIAAISVAERVADERCE SPGSS SLVGYQVRLDSARN++T
Sbjct: 656  DMIESGRGGHCNIICTQPRRIAAISVAERVADERCESSPGSSDSLVGYQVRLDSARNERT 715

Query: 2572 KLLFCTTGILLRKIAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKL 2393
            KLLFCTTGILLR  +G++NL GV+H+IVDEVHERSLLGDFLLIVLK+L++KQS   T KL
Sbjct: 716  KLLFCTTGILLRMFSGNKNLAGVSHIIVDEVHERSLLGDFLLIVLKSLIQKQSALCTAKL 775

Query: 2392 KVILMSATVDSHLFSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFE 2213
            KVILMSATVDSHLFS YF +CPVITAQGRTHPV+TYF+ED+YES NYRLASDS ASL + 
Sbjct: 776  KVILMSATVDSHLFSHYFGHCPVITAQGRTHPVSTYFLEDIYESTNYRLASDSPASLSYG 835

Query: 2212 TSTKDKSSAVNNRRGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNE 2033
             ST++K++ + N RGKKNLVLS WGD+S+LSEEYINPYY P NYQ+YSEQT++NL+K+NE
Sbjct: 836  ISTREKNAPIGNHRGKKNLVLSGWGDESLLSEEYINPYYDPSNYQNYSEQTQKNLRKLNE 895

Query: 2032 DVIDYDLLEDLVCYVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHS 1853
            ++IDYDLLEDLVCY+DET  EG+ILVFLPGV EI+ L D+L+ S++F G S++WILPLHS
Sbjct: 896  EIIDYDLLEDLVCYIDETYPEGSILVFLPGVGEIHTLYDRLSVSFQFSGQSSEWILPLHS 955

Query: 1852 SVASSDQKKVFLRPPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSM 1673
            SVAS DQKKVF+RPP+NIRKVIIATNIAETSITIDDVVYV+DCGKHKENRYNP+KKLSSM
Sbjct: 956  SVASEDQKKVFMRPPENIRKVIIATNIAETSITIDDVVYVVDCGKHKENRYNPKKKLSSM 1015

Query: 1672 VEDWISXXXXXXXXXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKL 1493
            VEDWIS            RVKPGIC+ LYT +R+EKLMRP+Q+PEMLRMPLVELCLQIKL
Sbjct: 1016 VEDWISQANARQRRGRAGRVKPGICFCLYTSYRYEKLMRPYQIPEMLRMPLVELCLQIKL 1075

Query: 1492 LSLGHIKPFLSKALEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKM 1313
            LSLG IK FLS ALEPP++EA+ SAIS+LYEVGA+EGDE LTPLGYHLA+LPVDVL+GKM
Sbjct: 1076 LSLGSIKLFLSMALEPPKDEAIASAISLLYEVGAVEGDEELTPLGYHLARLPVDVLVGKM 1135

Query: 1312 MLYGGIFGCLSPILSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQ 1133
            +LYGG+FGCLSPILSISAFLSYKSPF+YPKDERQNVER           G  DS  G+ Q
Sbjct: 1136 LLYGGVFGCLSPILSISAFLSYKSPFVYPKDERQNVERAKLALLSDKLGGETDSGSGNWQ 1195

Query: 1132 SDHLLMMIAYKKWEKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIK 953
            SDHLLMM+AYKKWEKI+RE G+KAA+ FC+SYFLSSSVM MIRDMR+QFGTLLADIG I 
Sbjct: 1196 SDHLLMMVAYKKWEKILRENGVKAAKQFCSSYFLSSSVMYMIRDMRIQFGTLLADIGFIN 1255

Query: 952  LPKTYQIDRRKRENLDCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVAL 773
            +PK  +ID +K+E LD WLSD SQPFNT +NH+SI+KAILCAGLYPNV+A E+GIA  AL
Sbjct: 1256 IPKKSEIDWKKKEKLDSWLSDISQPFNTNSNHSSILKAILCAGLYPNVSAREEGIATTAL 1315

Query: 772  GTLKQSTGLASKGHQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTT 593
            G LKQS GL++K +  WYDGRREVHIHPSSINS+LK+F++PF+VFLEKVETNKVFLRDTT
Sbjct: 1316 GNLKQSAGLSAKSNPAWYDGRREVHIHPSSINSNLKDFQYPFIVFLEKVETNKVFLRDTT 1375

Query: 592  IVSPYSILLFGGFINVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPE 413
            ++SPY+ILLFGG IN+ HQTG V IDGWL+++APAQTAVLFKELRLTLH IL+ELIR P+
Sbjct: 1376 VISPYTILLFGGPINIQHQTGRVTIDGWLEVAAPAQTAVLFKELRLTLHDILKELIRNPQ 1435

Query: 412  DAXXXXXXXXXXXSIIHLLLEEDKPR 335
                         SI+ LLLEEDK R
Sbjct: 1436 --VSLVTDNEVLRSIVQLLLEEDKQR 1459


>ref|XP_004499378.1| PREDICTED: ATP-dependent RNA helicase DHX36 isoform X1 [Cicer
            arietinum]
          Length = 1442

 Score = 1758 bits (4553), Expect = 0.0
 Identities = 918/1392 (65%), Positives = 1079/1392 (77%), Gaps = 14/1392 (1%)
 Frame = -1

Query: 4480 IYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLKFXXXXXXXXXXXX 4301
            +YE LSCEGF+ND IELALSALK  ATFE+ALDWLCLNLPGNELPLKF            
Sbjct: 63   VYEKLSCEGFSNDHIELALSALKECATFESALDWLCLNLPGNELPLKFSTGTSFHSSEEG 122

Query: 4300 SVGVILTAREDWTPSVDQSSTPNEEEPGISIRTKGRWDDETLDSCQSSQADWIKRYVEQE 4121
            SVGVIL  +++  P VD SST  E      +  K + +D+TLDSC SSQADWI++YVEQ+
Sbjct: 123  SVGVILNQQDNSIPLVDPSSTTKENALESPVLIKRQLNDDTLDSCHSSQADWIRQYVEQQ 182

Query: 4120 EEDEMSTTWEDHLVDEGST--KKISEPRSYDVIAEEYRVARLEAVKAKERGDKKSQEQAG 3947
            EEDE + TWED +  E +   KK  EPR YDVIA+EY  ARLEA  AKE+GD+K QEQA 
Sbjct: 183  EEDE-NNTWEDDIFYESNAAKKKPGEPRYYDVIAKEYLAARLEATMAKEKGDRKHQEQAS 241

Query: 3946 HIIRKVKQELSALGLSEDILASEFQ-----HEQATCTASEATIFSSTSHELSEAKECSIV 3782
             IIRK+KQELSALGLS+D LA E++     H     + S   +    SH+        + 
Sbjct: 242  RIIRKLKQELSALGLSDDNLALEYEQISTNHASERASMSHELLIEKGSHDDVSYSAIILP 301

Query: 3781 EGGLAFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVELGNFFLE 3602
              G A      E+  VE  +  S   E+ V          EK  A+ ++ D+ELG FFLE
Sbjct: 302  SDGAAINGSDVENHSVEGDLTKSCLPEVHV----------EKDSAQGEAGDIELGGFFLE 351

Query: 3601 DGPSNEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLCQKSGWE 3422
            D PSNE + PD+ + Q+ EK++ +S EKNL+KL+GIW+KGD  K+PKA LHQLCQKSGWE
Sbjct: 352  DVPSNE-IHPDILKAQKLEKIKRLS-EKNLDKLDGIWKKGDTQKVPKAILHQLCQKSGWE 409

Query: 3421 APXXXXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDAQNKVAA 3242
            AP             YTVS+LR+ASGRGK+RKAGGL TL+LP+ ++T ESAEDAQNKVAA
Sbjct: 410  APKFNKILGRGKSFAYTVSILRKASGRGKNRKAGGLVTLKLPDQNETFESAEDAQNKVAA 469

Query: 3241 FALYSLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGADGSNAT 3062
            +AL+ LFPD+PVHLLITEPYA  V++W             ED ++ FV+SLL  DGS  T
Sbjct: 470  YALFQLFPDVPVHLLITEPYALAVIKWMEGESLTKLEDSVEDHKSRFVESLLSGDGSGET 529

Query: 3061 SSADVMNNIISEEFQQIHYEENENSAVAEVHNH-------KEGESSYLRQEQENKMKMQK 2903
             SADV +    +   +I  +EN++S +    +        KE ES+ LR+ Q  KM  QK
Sbjct: 530  VSADVTDYTHPQNNSRI--DENKSSTIDSHQSFSQRRTYIKELESTNLREVQYIKMGSQK 587

Query: 2902 YKDMLKTRAALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVESGLGGH 2723
            Y+D+L  R  LPI++LKDDI  +LKEN+VLVVCGETGSGKTTQVPQFILD+M+ESG GGH
Sbjct: 588  YQDILNFRTTLPISTLKDDITQMLKENDVLVVCGETGSGKTTQVPQFILDEMIESGHGGH 647

Query: 2722 CNIICTQPRRIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLFCTTGIL 2543
            CNIICTQPRRIAAISVAERVADERCEPSPGS GSL+GYQVRLDSARN+KT+LLFCTTGIL
Sbjct: 648  CNIICTQPRRIAAISVAERVADERCEPSPGSDGSLIGYQVRLDSARNEKTRLLFCTTGIL 707

Query: 2542 LRKIAGDRNLTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVILMSATVD 2363
            LRK+ G+RNLTG+TH+I+DEVHERSLLGDFLLIVLKNL++KQST ++ K+KVILMSATVD
Sbjct: 708  LRKLMGNRNLTGITHIIIDEVHERSLLGDFLLIVLKNLIDKQSTESSSKVKVILMSATVD 767

Query: 2362 SHLFSKYFSNCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTKDKSSAV 2183
            S LFS+YF +CPV+TA+GRTHPVTTYF+ED+Y+ INYRLASDS ASL  ET    + + V
Sbjct: 768  SSLFSRYFGHCPVVTAEGRTHPVTTYFLEDIYDQINYRLASDSPASLTNETVPSRQRAPV 827

Query: 2182 NNRRGKKNLVLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVIDYDLLED 2003
             N RGKKNLVLSAWGD+S+LSEE+ NPY+V   YQSYSEQ +QN+K+VNEDVIDYDL+ED
Sbjct: 828  TNSRGKKNLVLSAWGDESVLSEEHFNPYFVSSYYQSYSEQAQQNMKRVNEDVIDYDLIED 887

Query: 2002 LVCYVDETCSEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVASSDQKKV 1823
            L+CY+DE C EG+ILVFLPGV EI  L DKL ASY+FGGPS+DW++PLHSSVAS++QKKV
Sbjct: 888  LICYIDENCDEGSILVFLPGVIEINHLHDKLVASYQFGGPSSDWVIPLHSSVASTEQKKV 947

Query: 1822 FLRPPQNIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISXXXX 1643
            FL PP+NIRKV+IATNIAETSITIDDV+YVIDCGKHKENR+NPQKKLSSMVEDWIS    
Sbjct: 948  FLHPPRNIRKVVIATNIAETSITIDDVIYVIDCGKHKENRFNPQKKLSSMVEDWISQANA 1007

Query: 1642 XXXXXXXXRVKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHIKPFL 1463
                    RVKPGIC+ LYTR+RFEKLMRP+QVPEMLRMPLVELCLQIKLLSLG+IKPFL
Sbjct: 1008 RQRQGRAGRVKPGICFRLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGYIKPFL 1067

Query: 1462 SKALEPPREEAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYGGIFGCL 1283
            S ALE P+ EAM+SAIS+LYEVGALEGDE LTPLG+HLAKLPVDVLIGKMMLYG IFGCL
Sbjct: 1068 SMALESPKIEAMDSAISLLYEVGALEGDEELTPLGHHLAKLPVDVLIGKMMLYGAIFGCL 1127

Query: 1282 SPILSISAFLSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHLLMMIAY 1103
            SPILS+SAFLSYKSPF+YPKDERQNVER          DG  +  D +RQSDHL+MMIAY
Sbjct: 1128 SPILSVSAFLSYKSPFVYPKDERQNVERAKLTLLNDKQDGPGEGNDINRQSDHLVMMIAY 1187

Query: 1102 KKWEKIVREKGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKTYQIDRR 923
            K+WE I+ E+G KAA  FCNSYFL+SSVM MIR+MRVQFGTLLADIGLI LPK YQ+D +
Sbjct: 1188 KRWENILNERGSKAALQFCNSYFLNSSVMFMIREMRVQFGTLLADIGLITLPKYYQMDGK 1247

Query: 922  KRENLDCWLSDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLKQSTGLA 743
            +  NLD WLSDASQPFN YA+H+SI+KAILCAGLYPNVAA E+GI   AL ++K+S   A
Sbjct: 1248 RIGNLDRWLSDASQPFNMYAHHSSILKAILCAGLYPNVAAGEQGIVAAALSSVKRSPSSA 1307

Query: 742  SKGHQVWYDGRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSPYSILLF 563
                 VW+DGRREVH+HPSSINS+ K F++PFLVFLEKVETNKVFLRDT+++SPYSILLF
Sbjct: 1308 ISNRTVWFDGRREVHVHPSSINSNTKAFQYPFLVFLEKVETNKVFLRDTSVISPYSILLF 1367

Query: 562  GGFINVHHQTGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAXXXXXXXX 383
            GG INV HQTG+V IDGWLKL+APAQ AVLFKELRLTLHSIL+ELIRKPE+         
Sbjct: 1368 GGSINVQHQTGLVIIDGWLKLNAPAQIAVLFKELRLTLHSILKELIRKPENV--IVLKNE 1425

Query: 382  XXXSIIHLLLEE 347
               SII LLLEE
Sbjct: 1426 IIKSIITLLLEE 1437


>ref|XP_010314576.1| PREDICTED: ATP-dependent RNA helicase DHX36 [Solanum lycopersicum]
          Length = 1438

 Score = 1755 bits (4546), Expect = 0.0
 Identities = 909/1387 (65%), Positives = 1083/1387 (78%), Gaps = 5/1387 (0%)
 Frame = -1

Query: 4480 IYENLSCEGFTNDQIELALSALKNGATFEAALDWLCLNLPGNELPLKFXXXXXXXXXXXX 4301
            IYE LSCEGF+N+QIELALSALK  ATFEAALDWLCLNL GNELPLKF            
Sbjct: 67   IYEKLSCEGFSNNQIELALSALKERATFEAALDWLCLNLRGNELPLKFSSGTSQSNEGS- 125

Query: 4300 SVGVILTAREDWTPSVDQSSTPNEEE--PGISIRTKGRWDDETLDSCQSSQADWIKRYVE 4127
             VG+I TAR+DW PS D S    +EE  P +S+  KGR D E L + + +QADWI++Y+E
Sbjct: 126  -VGIISTARQDWVPSADSSVAEVKEEKIPTVSVVPKGRSDSEFLRTVERAQADWIRQYME 184

Query: 4126 QEEEDEMSTTWEDHLVDEGSTKKIS-EPRSYDVIAEEYRVARLEAVKAKERGDKKSQEQA 3950
            Q+EEDE + +WE    D+GS +++  + RS + I +E+  ARLEA+ AKERGDKK QEQA
Sbjct: 185  QQEEDE-AESWESGFSDDGSLEQVPRKKRSVESIVQEFHTARLEAIHAKERGDKKGQEQA 243

Query: 3949 GHIIRKVKQELSALGLSEDILASEFQHEQATCTASEATIFSSTSHELSEAKECSIVEGGL 3770
              IIRK+KQE+S+LGL +DIL S   HE    +AS+  +   +S +L      S      
Sbjct: 244  SRIIRKIKQEISSLGLPDDILESA--HE----SASDHAVLDRSSEKLDVDDVTS--PNFR 295

Query: 3769 AFGLHAEESTIVEDKMEYSGPKELQVKCTRSGVSVEEKIPAEEDSIDVELGNFFLEDGPS 3590
               +H  E  I  D++  +      ++   S V + +K  +  +  DVELG+F  E+  S
Sbjct: 296  TSDIHEHE--IGMDEVSVNNSSNEFIENNPSSVPLGDKAASGGEPEDVELGDFLFEEDSS 353

Query: 3589 NEGLLPDVYELQRKEKMREMSSEKNLEKLEGIWRKGDPLKIPKASLHQLCQKSGWEAPXX 3410
             + +L  V ELQ+KEKMRE+ S+KNLEKLEGIW+KGDP KIPKA LHQLCQ+SGWEAP  
Sbjct: 354  AD-VLATVLELQKKEKMRELCSQKNLEKLEGIWKKGDPQKIPKAFLHQLCQRSGWEAPKY 412

Query: 3409 XXXXXXXXXXFYTVSVLRRASGRGKSRKAGGLTTLQLPNADDTSESAEDAQNKVAAFALY 3230
                       Y+VS++R+ASGRGKSRKAGGL T++LP+ D  S +AEDAQN+VAA+AL+
Sbjct: 413  AKIPGKGNLTSYSVSIMRKASGRGKSRKAGGLVTMELPSQDHASSTAEDAQNRVAAYALH 472

Query: 3229 SLFPDLPVHLLITEPYASLVLQWKXXXXXXXXXXXXEDRRASFVDSLLGADGSNATSSAD 3050
             LFPDLPVH+ ITEPYASL+LQW+             +RRA FVDSLL A GS   + +D
Sbjct: 473  RLFPDLPVHMPITEPYASLILQWEEGDSVKDIVDDQVERRAYFVDSLLDASGSETITLSD 532

Query: 3049 VMNNIISEEFQQIHYEENENSAVAEVHNH--KEGESSYLRQEQENKMKMQKYKDMLKTRA 2876
            V NN   E+F   H  E++   V     +  KE ES  L++EQE + K++KY++MLK+RA
Sbjct: 533  VSNNASKEKFLHPHTTEDKTVPVDYTAKNPLKEAESLSLKKEQEGRKKLKKYQEMLKSRA 592

Query: 2875 ALPIASLKDDILHLLKENNVLVVCGETGSGKTTQVPQFILDDMVESGLGGHCNIICTQPR 2696
            ALPIA LK +ILH L+EN+VLV+CGETG GKTTQVPQFILDDM+ESG GGHCNIICTQPR
Sbjct: 593  ALPIADLKGEILHSLEENDVLVICGETGCGKTTQVPQFILDDMIESGRGGHCNIICTQPR 652

Query: 2695 RIAAISVAERVADERCEPSPGSSGSLVGYQVRLDSARNDKTKLLFCTTGILLRKIAGDRN 2516
            RIAA SVAERVADERCE SPGSS SLVGYQVRLDSARN++TKLLFCTTGILLR  +G+++
Sbjct: 653  RIAATSVAERVADERCESSPGSSESLVGYQVRLDSARNERTKLLFCTTGILLRMFSGNKS 712

Query: 2515 LTGVTHVIVDEVHERSLLGDFLLIVLKNLVEKQSTYNTPKLKVILMSATVDSHLFSKYFS 2336
            L GV+H+IVDEVHERSLLGDFLLIVLK+L++ QS   T KLKVILMSATVDSHLFS YF 
Sbjct: 713  LAGVSHIIVDEVHERSLLGDFLLIVLKSLIQMQSALGTAKLKVILMSATVDSHLFSHYFG 772

Query: 2335 NCPVITAQGRTHPVTTYFIEDVYESINYRLASDSSASLRFETSTKDKSSAVNNRRGKKNL 2156
            NCPVITAQGRTHPV+TYF+ED+YESINYRLASDS ASL + TST++K++ + N RGKKNL
Sbjct: 773  NCPVITAQGRTHPVSTYFLEDIYESINYRLASDSPASLSYGTSTREKNAPIGNHRGKKNL 832

Query: 2155 VLSAWGDDSMLSEEYINPYYVPDNYQSYSEQTRQNLKKVNEDVIDYDLLEDLVCYVDETC 1976
            VLSAWGD+S+LSEEYINPYY   NYQ+YS QT++NL+K+NED+IDYDLLEDLVCY+DET 
Sbjct: 833  VLSAWGDESLLSEEYINPYYDSSNYQNYSGQTQKNLRKLNEDIIDYDLLEDLVCYIDETY 892

Query: 1975 SEGAILVFLPGVSEIYMLVDKLTASYRFGGPSADWILPLHSSVASSDQKKVFLRPPQNIR 1796
             +GAILVFLPGV+EI  L D+L+ S++F G S++WILPLHSSVAS DQKKVF+RPP+NIR
Sbjct: 893  PDGAILVFLPGVAEINTLFDRLSVSFQFSGQSSEWILPLHSSVASEDQKKVFMRPPENIR 952

Query: 1795 KVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISXXXXXXXXXXXXR 1616
            KVIIATNIAETSITIDDVVYV+DCGKHKENRYNP+KKLSSMVEDWIS            R
Sbjct: 953  KVIIATNIAETSITIDDVVYVVDCGKHKENRYNPKKKLSSMVEDWISQANARQCRGRAGR 1012

Query: 1615 VKPGICYALYTRHRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHIKPFLSKALEPPRE 1436
            VKPGIC+ LYT +R+EKLMRP+Q+PEMLRMPLVELCLQIKLLSLG IK FLS ALEPP++
Sbjct: 1013 VKPGICFCLYTSYRYEKLMRPYQIPEMLRMPLVELCLQIKLLSLGSIKLFLSMALEPPKD 1072

Query: 1435 EAMNSAISVLYEVGALEGDELLTPLGYHLAKLPVDVLIGKMMLYGGIFGCLSPILSISAF 1256
            EA+ SAIS+LYEVGA+EG+E LTPLGYHLA+LPVDVL+GKM+LYGG+FGCLSPILSISAF
Sbjct: 1073 EAIMSAISLLYEVGAVEGNEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISAF 1132

Query: 1255 LSYKSPFIYPKDERQNVERXXXXXXXXXXDGSFDSYDGHRQSDHLLMMIAYKKWEKIVRE 1076
            LSYKSPF+YPKDERQNVER              DS  G+ QSDHLLMM+AYKKWEKI+RE
Sbjct: 1133 LSYKSPFVYPKDERQNVERAKLALLSDKLGCETDSDSGNWQSDHLLMMVAYKKWEKILRE 1192

Query: 1075 KGIKAAQHFCNSYFLSSSVMLMIRDMRVQFGTLLADIGLIKLPKTYQIDRRKRENLDCWL 896
            KG+KAA+ FC+SYFLSSSVM MIRDMRVQFGTLLADIGLI LPK  ++D +K+E L  WL
Sbjct: 1193 KGVKAAKQFCSSYFLSSSVMYMIRDMRVQFGTLLADIGLINLPKKSEVDWKKKEKLGSWL 1252

Query: 895  SDASQPFNTYANHTSIIKAILCAGLYPNVAATEKGIAEVALGTLKQSTGLASKGHQVWYD 716
            SD SQPFN  +NH+S++KAILCAGLYPNV+A E+GIA  ALG LKQS   ++K +  WYD
Sbjct: 1253 SDISQPFNINSNHSSVLKAILCAGLYPNVSAREEGIATTALGNLKQSANNSAKSNPAWYD 1312

Query: 715  GRREVHIHPSSINSSLKEFRHPFLVFLEKVETNKVFLRDTTIVSPYSILLFGGFINVHHQ 536
            G+REVHIHPSSINS LK F++PFLVFLEKVETNKVFLRDTT+VSPY+ILLFGG INV HQ
Sbjct: 1313 GKREVHIHPSSINSDLKAFQYPFLVFLEKVETNKVFLRDTTVVSPYTILLFGGPINVQHQ 1372

Query: 535  TGIVAIDGWLKLSAPAQTAVLFKELRLTLHSILRELIRKPEDAXXXXXXXXXXXSIIHLL 356
            TG V IDGWL+++APAQTAVLFKELRLTLH IL+ELIR P+ +           SII LL
Sbjct: 1373 TGTVTIDGWLEVTAPAQTAVLFKELRLTLHDILKELIRNPQAS--KVTDNEVLRSIIQLL 1430

Query: 355  LEEDKPR 335
            LEEDK R
Sbjct: 1431 LEEDKQR 1437