BLASTX nr result
ID: Ziziphus21_contig00009688
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ziziphus21_contig00009688 (2586 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_008457278.1| PREDICTED: probable RNA polymerase II transc... 888 0.0 ref|XP_011653743.1| PREDICTED: probable RNA polymerase II transc... 888 0.0 ref|XP_009341372.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 862 0.0 ref|XP_011465754.1| PREDICTED: probable RNA polymerase II transc... 844 0.0 ref|XP_008218664.1| PREDICTED: probable RNA polymerase II transc... 842 0.0 ref|XP_009355364.1| PREDICTED: probable RNA polymerase II transc... 819 0.0 ref|XP_008347931.1| PREDICTED: probable RNA polymerase II transc... 819 0.0 ref|XP_008378918.1| PREDICTED: probable RNA polymerase II transc... 814 0.0 ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 812 0.0 ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prun... 798 0.0 ref|XP_012477564.1| PREDICTED: probable RNA polymerase II transc... 797 0.0 gb|KJB09170.1| hypothetical protein B456_001G127200 [Gossypium r... 792 0.0 ref|XP_008457279.1| PREDICTED: probable RNA polymerase II transc... 783 0.0 ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transc... 779 0.0 ref|XP_007144178.1| hypothetical protein PHAVU_007G134900g [Phas... 777 0.0 ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transc... 775 0.0 ref|XP_014514406.1| PREDICTED: probable RNA polymerase II transc... 774 0.0 ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transc... 774 0.0 gb|KHN30690.1| Putative RNA polymerase II transcription factor B... 771 0.0 ref|XP_010032566.1| PREDICTED: probable RNA polymerase II transc... 769 0.0 >ref|XP_008457278.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Cucumis melo] Length = 595 Score = 888 bits (2295), Expect = 0.0 Identities = 443/607 (72%), Positives = 504/607 (83%) Frame = -1 Query: 2115 MSSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKE 1936 M ++ V K AKYK SVKDPGTPGVL+M E K +FRPSDPTSA+KLDVEFR IKGHK+TKE Sbjct: 1 MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKE 60 Query: 1935 GSNKPPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXX 1756 GSNKPPWLNL DQGGSYIFEF++FSDLH+CREFVG+ Sbjct: 61 GSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCREFVGS------------ALAKLGEAAQA 108 Query: 1755 XSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLDG 1576 SE EQLS +EMELRM+ L+E+SELQKLHKQFVIGGVLTESEFWA RKKLL+ Sbjct: 109 PSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLER 168 Query: 1575 DNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVPS 1396 D+ +K KQ +GFK+SM+LDTKPM+DGRTNKVTF+LTPEIKYQIF LKPAVHQAFLN VP+ Sbjct: 169 DSSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQAFLNHVPN 228 Query: 1395 KMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDPT 1216 KM+EKDFW+KYFRAEYLHSTKN A+FLKDD+ILA + R+KIR VDPT Sbjct: 229 KMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAADTRKKIRHVDPT 288 Query: 1215 LDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVDL 1036 LD+EAD GDDYTHLPDHGIFRDG K+I+ESQ EHY+RTLSQDLNRQGAVVLEGR +DVDL Sbjct: 289 LDLEADLGDDYTHLPDHGIFRDGGKEITESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDL 348 Query: 1035 EDPRIVAQALVRSRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKDPREYFDA 856 EDPR VA+ALVRSR N Q L+RISRMT IEDLQAPH HPFAPLCIKDPR+YFDA Sbjct: 349 EDPRTVAEALVRSRHAVEGNERQTALDRISRMTAIEDLQAPHSHPFAPLCIKDPRDYFDA 408 Query: 855 QQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVALMVFNG 676 QQANA+++LDDTRAG +Q KC+L+ E Y SLR+SISEIK+ G N PI+KPEVALMV+NG Sbjct: 409 QQANAIKTLDDTRAGMQQTKCSLSTTEAYCSLRESISEIKSSGFNHPIIKPEVALMVYNG 468 Query: 675 LTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITTTYLNTK 496 LTQNISS KYQLGKNPQESIL+ LPN TKEELLHHW+SIQELL+HFWSSYPITT+YL TK Sbjct: 469 LTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLKHFWSSYPITTSYLYTK 528 Query: 495 VTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQKRSARTG 316 V+RLKDAMS+IYRQLE+IK ++ +DFRHQVSLLVRPMHQALDAAFQH+DADLQKRS ++G Sbjct: 529 VSRLKDAMSKIYRQLEEIKETVVADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKSG 588 Query: 315 ETPNGYS 295 E NGY+ Sbjct: 589 ERVNGYT 595 >ref|XP_011653743.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Cucumis sativus] gi|778694117|ref|XP_011653744.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Cucumis sativus] Length = 595 Score = 888 bits (2294), Expect = 0.0 Identities = 441/607 (72%), Positives = 502/607 (82%) Frame = -1 Query: 2115 MSSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKE 1936 M ++ V K AKYK SVKDPGTPGVL+M E K +FRPSDPTSA+KLDVEFR IKGHK+TKE Sbjct: 1 MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKE 60 Query: 1935 GSNKPPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXX 1756 GSNKPPWLNL DQGGSYIFEF++FSDLH+CRE VG+ Sbjct: 61 GSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQAPS---------- 110 Query: 1755 XSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLDG 1576 E EQLS EMELRM+ L+E+SELQKLHKQFVIGGVLTESEFWA RKKLL+ Sbjct: 111 --ERPVAAFPHEQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLEQ 168 Query: 1575 DNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVPS 1396 DN +K KQ +GFK+SM+LDTKPM+DGRTNKVTF+LTPEIKYQIF LKPAVHQAFLN VP+ Sbjct: 169 DNSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQAFLNHVPN 228 Query: 1395 KMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDPT 1216 K++EKDFW+KYFRAEYLHSTKN A+FLKDD+ILA E R+KIR VDPT Sbjct: 229 KISEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPT 288 Query: 1215 LDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVDL 1036 LD+EAD GDDYTHLPDHGIFRDG K+I+ESQ EHY+RTLSQDLNRQGAVVLEGR +DVDL Sbjct: 289 LDLEADLGDDYTHLPDHGIFRDGGKEITESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDL 348 Query: 1035 EDPRIVAQALVRSRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKDPREYFDA 856 EDPR VA ALVRS+ N SQ L+RISRMT IEDLQAPH HPFAPLCIKDPR+YFDA Sbjct: 349 EDPRTVADALVRSKHAVEGNESQTALDRISRMTAIEDLQAPHSHPFAPLCIKDPRDYFDA 408 Query: 855 QQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVALMVFNG 676 QQANA+++LDDTRAG +Q KC+L+ E YGSLR+SISEIK+ G N PI+KPEVALMV+NG Sbjct: 409 QQANAIKTLDDTRAGMQQTKCSLSTTEAYGSLRESISEIKSSGFNHPIIKPEVALMVYNG 468 Query: 675 LTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITTTYLNTK 496 LTQNISS KYQLGKNPQESIL+ LPN TKEELLHHW+SIQELL+HFWSSYPITT+YL TK Sbjct: 469 LTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLKHFWSSYPITTSYLYTK 528 Query: 495 VTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQKRSARTG 316 V+RLKDAM++IYRQLE+IK ++ +DFRHQVSLLVRPMHQALDAAFQH+DAD+QKRS ++G Sbjct: 529 VSRLKDAMAKIYRQLEEIKETVVADFRHQVSLLVRPMHQALDAAFQHHDADMQKRSVKSG 588 Query: 315 ETPNGYS 295 E NGY+ Sbjct: 589 ERLNGYT 595 >ref|XP_009341372.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA polymerase II transcription factor B subunit 1-1 [Pyrus x bretschneideri] Length = 606 Score = 862 bits (2226), Expect = 0.0 Identities = 440/614 (71%), Positives = 496/614 (80%), Gaps = 5/614 (0%) Frame = -1 Query: 2112 SSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKEG 1933 SSR V+KR KYK +VK+PGTPGVL M EN+ +F+P+DPTSA LDVEFRHIKGHK+TKEG Sbjct: 5 SSRRVVKRVKYKDAVKNPGTPGVLTMVENRFVFKPNDPTSARMLDVEFRHIKGHKNTKEG 64 Query: 1932 SNKPPWLNLPHDQGG-----SYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXX 1768 S +PP LNL SYIFEF+S+ DLH CR+FVGN Sbjct: 65 SKQPPLLNLSSSSREVFFYISYIFEFQSYPDLHXCRDFVGNALSKATETAKTAS------ 118 Query: 1767 XXXXXSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKK 1588 E VT DEQLS EMELRMKLL+E+SELQKLH QFVI GVLTESEFWATRKK Sbjct: 119 ------ERDGVTFPDEQLSAAEMELRMKLLQEDSELQKLHMQFVISGVLTESEFWATRKK 172 Query: 1587 LLDGDNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLN 1408 LLDGD+ K KQRVGFKNSMILDTKP +DGR NKVTF+ TPEIKYQIF LKPAVHQAFL Sbjct: 173 LLDGDSRTKPKQRVGFKNSMILDTKPTSDGRMNKVTFNFTPEIKYQIFALKPAVHQAFLK 232 Query: 1407 FVPSKMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRR 1228 VPSKMTEKDFW+KYFRAE+LHSTKN A+FLK+D+I+AREARQKIRR Sbjct: 233 LVPSKMTEKDFWTKYFRAEFLHSTKNAATIAAEAAEDEELAIFLKEDEIVAREARQKIRR 292 Query: 1227 VDPTLDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAV 1048 VDPTLDMEADQGDDYTHLPDHGIFRDGSKDI+E Q E Y+RTLSQDLNRQGAVVL+GR V Sbjct: 293 VDPTLDMEADQGDDYTHLPDHGIFRDGSKDITELQNEQYRRTLSQDLNRQGAVVLQGRTV 352 Query: 1047 DVDLEDPRIVAQALVRSRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKDPRE 868 D DLEDP VA+AL+RSR E E+A QERL+RI+RM EI+DLQ PHDHP A LCIKDPR+ Sbjct: 353 DGDLEDPENVAEALMRSRQEPEESAVQERLDRITRMNEIDDLQEPHDHPVAQLCIKDPRD 412 Query: 867 YFDAQQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVALM 688 YFD QQANAL++LDD+R GTEQ KC++T EE YGSLR+SIS+IK+ GL + V+PE+AL Sbjct: 413 YFDTQQANALKTLDDSRIGTEQKKCSMTTEEAYGSLRESISKIKSIGLKNSTVEPEIALT 472 Query: 687 VFNGLTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITTTY 508 V NGLTQNISS KYQLGKNP+ESILD LP+ TKEELLHHWMSIQELL+HFWSSYPITT Y Sbjct: 473 VLNGLTQNISSTKYQLGKNPRESILDSLPSRTKEELLHHWMSIQELLRHFWSSYPITTAY 532 Query: 507 LNTKVTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQKRS 328 L+TKV +LKDAMSQIYRQLE+IK +SDFRHQVSLLVRPMHQALDAAFQHY++DLQKR+ Sbjct: 533 LSTKVGKLKDAMSQIYRQLEEIK---ESDFRHQVSLLVRPMHQALDAAFQHYESDLQKRA 589 Query: 327 ARTGETPNGYS*EK 286 AR+ E PNG + EK Sbjct: 590 ARSAEMPNGNAXEK 603 >ref|XP_011465754.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 [Fragaria vesca subsp. vesca] Length = 606 Score = 844 bits (2180), Expect = 0.0 Identities = 422/609 (69%), Positives = 496/609 (81%), Gaps = 8/609 (1%) Frame = -1 Query: 2103 EVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKEGSNK 1924 +VIKRAKYK S+KDPGTPG+L M E++ +FRPSDPTS KLDV F+ +KG K+T+EGSNK Sbjct: 6 QVIKRAKYKTSIKDPGTPGLLTMLEHRFVFRPSDPTSPAKLDVPFQLLKGQKNTREGSNK 65 Query: 1923 PPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXXXSEG 1744 PPWLN+ +++ GSYIFEFES+ DLH CRE + N Sbjct: 66 PPWLNITNNKDGSYIFEFESYPDLHACREIIANALEAAKGSSAPTITSA----------A 115 Query: 1743 SAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLDGDNYR 1564 +A + +EQ ST E+ELRMKL++E+SELQKLHKQFV GVLTESEFWATRK+LLDGD+ R Sbjct: 116 NASSSANEQFSTAELELRMKLMQEDSELQKLHKQFVGSGVLTESEFWATRKRLLDGDSRR 175 Query: 1563 KLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVPSKMTE 1384 K KQRVGFK+SMILD KPMTDGR NKVTF+LT EIKYQIF LKPAVHQAF+N VPSKMTE Sbjct: 176 KSKQRVGFKSSMILDIKPMTDGRMNKVTFNLTDEIKYQIFALKPAVHQAFINLVPSKMTE 235 Query: 1383 KDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDPTLDME 1204 KDFW+KYFRAEYLHSTKN A+FLK+D+ILAREARQKI+RVDPTLDME Sbjct: 236 KDFWNKYFRAEYLHSTKNAVAAAAEAAEDEELAIFLKEDEILAREARQKIQRVDPTLDME 295 Query: 1203 ADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVDLEDPR 1024 ADQGDDYTH+PDHGIFRDG+KD++E Q E Y+RTLSQDLNRQGAVVL+GR +D D EDPR Sbjct: 296 ADQGDDYTHIPDHGIFRDGNKDMTEQQNEQYRRTLSQDLNRQGAVVLQGRNLDADPEDPR 355 Query: 1023 IVAQALVRSRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKDPREYFDAQQAN 844 +A+AL+ SR + +++A+Q+RL+RI+RMTEI+DL+ HDHP APLCIKDPR+YFD QQAN Sbjct: 356 SIAEALMLSREDPSDSAAQKRLDRITRMTEIDDLRESHDHPVAPLCIKDPRDYFDTQQAN 415 Query: 843 ALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVALMVFN----- 679 ALR+LD++R GTEQ K LT EE YGSL++SIS+IK+ GL++ VKPEVALMV Sbjct: 416 ALRTLDESRTGTEQTKRKLTTEEAYGSLKESISKIKSFGLSNSTVKPEVALMVITLVRKE 475 Query: 678 ---GLTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITTTY 508 GLTQNISS KYQLGKNP+ESILD LPN TKEELLHHW SIQELL+HFWSSYPITT+ Sbjct: 476 LSCGLTQNISSTKYQLGKNPRESILDGLPNRTKEELLHHWTSIQELLRHFWSSYPITTSS 535 Query: 507 LNTKVTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQKRS 328 L K+ RLKDAMSQIYRQLE+IK ++QSDFRHQVSLLVRPMHQALDAAFQHY+ADLQKR+ Sbjct: 536 LYVKIGRLKDAMSQIYRQLEEIKEAVQSDFRHQVSLLVRPMHQALDAAFQHYEADLQKRA 595 Query: 327 ARTGETPNG 301 A++GE PNG Sbjct: 596 AKSGELPNG 604 >ref|XP_008218664.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 [Prunus mume] Length = 578 Score = 842 bits (2175), Expect = 0.0 Identities = 426/582 (73%), Positives = 483/582 (82%), Gaps = 1/582 (0%) Frame = -1 Query: 2037 MNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKEGSNKPPWLNLPHDQGGSYIFEFESFS 1858 M ENK +FRP+DP+SA K DVEF++I GHK+TKEG++KPPWLNL D+ YIFEF +F Sbjct: 1 MTENKFVFRPNDPSSAAKFDVEFKYITGHKNTKEGTDKPPWLNLS-DKDRCYIFEFGTFH 59 Query: 1857 DLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXXXSEGSAVTHLDEQLSTTEMELRMKLL 1678 DLH+CR+FVGN SE S VT DEQLST EM+LRMKLL Sbjct: 60 DLHVCRDFVGNALAKSGEAAKASSAAKPTSAAKTTSEKSGVTLPDEQLSTAEMQLRMKLL 119 Query: 1677 RENSELQKLHKQFVIGGVLTESEFWATRKKLLDGDNYRKLKQRVGFKNSMILDTKPMTDG 1498 +E+SELQKLH QFVI GVLTESEFWATRKKLLDGD+ K KQRVGF++SMILDTKPMTDG Sbjct: 120 QEDSELQKLHMQFVISGVLTESEFWATRKKLLDGDSRTKSKQRVGFRSSMILDTKPMTDG 179 Query: 1497 RTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVPSKMTEKDFWSKYFRAEYLHSTKNXXXX 1318 R NKVTF+LTPEIKYQIF LKPAVHQAFL VPSKMTEKDFW+KYFRAEYLHST+N Sbjct: 180 RMNKVTFNLTPEIKYQIFALKPAVHQAFLTLVPSKMTEKDFWTKYFRAEYLHSTRNAVAA 239 Query: 1317 XXXXXXXXXXAMFLKDDDILAREARQKIRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKD 1138 A+FLK+D ILA EAR+KIRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKD Sbjct: 240 AAEAAEDEELAIFLKEDAILASEARRKIRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKD 299 Query: 1137 ISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVDLEDPRIVAQALVRSRPETNENASQERL 958 ++E Q E Y+RTLSQDLNRQGAVVL+GR VDVDLEDPR VA+AL++SR E++E+A Q+RL Sbjct: 300 VTELQNELYRRTLSQDLNRQGAVVLQGRTVDVDLEDPRTVAEALMQSRRESDESAEQDRL 359 Query: 957 ERISRMTEIEDLQAPHDHPFAPLCIKDPREYFDAQQANALRSLDDTRAGTEQMKCNLTNE 778 +RI+RMTEIEDLQ HDHP A LCIKDPR+YFD QQ NAL++LDD+R GTEQ KC+LT E Sbjct: 360 DRITRMTEIEDLQEHHDHPVAQLCIKDPRDYFDTQQVNALKTLDDSRTGTEQKKCSLTTE 419 Query: 777 EVYGSLRKSISEIKTRGLNDPIVKPEVALMVFNGLTQNISSNKYQLGKNPQESILDRLPN 598 E YGSLR++IS+IK+ GL + V PE+A+ V NGLTQNISS KYQLGKNPQ+S+LD LPN Sbjct: 420 EAYGSLREAISKIKSIGLKNSTVAPEIAITVLNGLTQNISSTKYQLGKNPQDSVLDSLPN 479 Query: 597 TTKEELLHHWMSIQELLQHFWSSYPITTTYLNTKVTRLKDAMSQIYRQLEDIKASMQSDF 418 TKEELLHHWMSIQELL+HFWSSYPITTTYL+TKV RLKDAMSQIYRQLE+IK QSDF Sbjct: 480 KTKEELLHHWMSIQELLRHFWSSYPITTTYLSTKVGRLKDAMSQIYRQLEEIK---QSDF 536 Query: 417 RHQVSLLVRPMHQALDAAFQHYDADLQKRSART-GETPNGYS 295 RHQVSLLVRPMHQALDAAFQH+DADLQKR+AR+ GETPNG S Sbjct: 537 RHQVSLLVRPMHQALDAAFQHFDADLQKRAARSGGETPNGNS 578 >ref|XP_009355364.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-3 isoform X1 [Pyrus x bretschneideri] gi|694329189|ref|XP_009355365.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-3 isoform X2 [Pyrus x bretschneideri] Length = 600 Score = 819 bits (2116), Expect = 0.0 Identities = 424/612 (69%), Positives = 486/612 (79%), Gaps = 3/612 (0%) Frame = -1 Query: 2127 TKTKMSSREVIKRAKYKIS--VKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKG 1954 + + SSR V+KRA+YK + +K+PG PGVL M E+K +F+P+DPTS LDVEFRHIKG Sbjct: 3 SSSSSSSRRVVKRAQYKDAARLKNPGIPGVLTMVEDKFVFKPNDPTSTQTLDVEFRHIKG 62 Query: 1953 HKHTKEGSNKPPWLNLPHDQG-GSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXX 1777 HK+TKEGS + P LNL + SYIFEF+SF DLH CR+FVGN Sbjct: 63 HKNTKEGSKQAPLLNLSSSREVKSYIFEFQSFPDLHECRDFVGNALSKAAEAAKTAP--- 119 Query: 1776 XXXXXXXXSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWAT 1597 + VT DEQLS EMELRMKLL+E+SELQ LH QFVI GVLTESEFWAT Sbjct: 120 ---------KKDGVTLPDEQLSAAEMELRMKLLQEDSELQNLHMQFVISGVLTESEFWAT 170 Query: 1596 RKKLLDGDNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQA 1417 RKKLLDGD+ K KQRVGFKNSM LDTKP +DGR NKVTF+ TPEIKYQIF LKPAVHQA Sbjct: 171 RKKLLDGDSRTKPKQRVGFKNSMSLDTKPTSDGRMNKVTFNFTPEIKYQIFALKPAVHQA 230 Query: 1416 FLNFVPSKMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQK 1237 FL VPSKMT KDFW+KYFRAE+LHSTKN A+FLK+D+ILAREARQK Sbjct: 231 FLELVPSKMTAKDFWTKYFRAEFLHSTKNAAAIAAEAAEDEELAIFLKEDEILAREARQK 290 Query: 1236 IRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEG 1057 IRRVDPTLDMEADQGDDYTHLPDHGIFRDG KDI+E Q E Y+RTLSQDLNRQGAVVL+G Sbjct: 291 IRRVDPTLDMEADQGDDYTHLPDHGIFRDGGKDITELQNEQYRRTLSQDLNRQGAVVLQG 350 Query: 1056 RAVDVDLEDPRIVAQALVRSRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKD 877 R VD DLEDP VA+AL+RSR E +E+A QERL+RI+RM EI+DL+ PHDHP A LCIKD Sbjct: 351 RTVDGDLEDPNNVAEALMRSRQEPDESAVQERLDRIARMNEIDDLREPHDHPVAQLCIKD 410 Query: 876 PREYFDAQQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEV 697 PR+YFD QQANAL++LD++R GTEQ KC++T EE YGSL++SIS+IK+ GL + V PE+ Sbjct: 411 PRDYFDTQQANALKALDESRIGTEQKKCSMTTEEAYGSLKESISKIKSIGLKNSTVAPEI 470 Query: 696 ALMVFNGLTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPIT 517 ALMV NGLTQNISS KYQLGKNP+E ILD LPN KEELLHH MSIQELL+HFWS+YPIT Sbjct: 471 ALMVLNGLTQNISSTKYQLGKNPREGILDSLPNKMKEELLHHSMSIQELLRHFWSTYPIT 530 Query: 516 TTYLNTKVTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQ 337 T YL+TKV +LKDAMSQIYRQLE+IK +SDFRHQVSLLVRPMHQALDAAFQHY+++LQ Sbjct: 531 TAYLSTKVGKLKDAMSQIYRQLEEIK---ESDFRHQVSLLVRPMHQALDAAFQHYESNLQ 587 Query: 336 KRSARTGETPNG 301 KR+A T PNG Sbjct: 588 KRAA-TATMPNG 598 >ref|XP_008347931.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-3 isoform X2 [Malus domestica] Length = 601 Score = 819 bits (2115), Expect = 0.0 Identities = 425/612 (69%), Positives = 485/612 (79%), Gaps = 3/612 (0%) Frame = -1 Query: 2127 TKTKMSSREVIKRAKYKIS--VKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKG 1954 + + SSR V+KRA+YK + +K+PG GVL M ENK +F+P+DPTS LDVEFRHIKG Sbjct: 3 SSSSSSSRRVVKRAQYKDAARLKNPGIXGVLTMVENKFVFKPNDPTSIQTLDVEFRHIKG 62 Query: 1953 HKHTKEGSNKPPWLNLPHDQG-GSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXX 1777 HK+TKEGS + P LNL + SYIFEF+SF DLH CR+FV N Sbjct: 63 HKNTKEGSKQAPLLNLSSSREVKSYIFEFQSFPDLHECRDFVANALSKASEAAKTGPKKV 122 Query: 1776 XXXXXXXXSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWAT 1597 VT DEQLS EMELRMKLL+E+SELQKLH QFVI GVLTESEFWAT Sbjct: 123 X------------VTLPDEQLSAAEMELRMKLLQEDSELQKLHMQFVISGVLTESEFWAT 170 Query: 1596 RKKLLDGDNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQA 1417 RKKLLDG+++ K KQRVGFKNSMILDTKP +DGR NKVTF+ TPEIKYQIF LKPAVHQA Sbjct: 171 RKKLLDGESHTKPKQRVGFKNSMILDTKPTSDGRMNKVTFNFTPEIKYQIFALKPAVHQA 230 Query: 1416 FLNFVPSKMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQK 1237 FL VPSKMT KDFW+KYFRAE+LHSTKN A+FLK+D+ILAREA QK Sbjct: 231 FLELVPSKMTAKDFWTKYFRAEFLHSTKNAAAIAAEAAEDEELAIFLKEDEILAREAHQK 290 Query: 1236 IRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEG 1057 IR+VDPTLDMEADQGDDYTHLPDHGIFRDGSKDI+E Q E Y+RTLSQDLNRQGAVVL+G Sbjct: 291 IRQVDPTLDMEADQGDDYTHLPDHGIFRDGSKDITELQNEQYRRTLSQDLNRQGAVVLQG 350 Query: 1056 RAVDVDLEDPRIVAQALVRSRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKD 877 R VD DLEDP VA+AL+RSR E +E+A QERL+RI+RM EI+DL+ P DH A LCIKD Sbjct: 351 RTVDGDLEDPNNVAEALMRSRQEPDESAVQERLDRITRMNEIDDLREPRDHRVAQLCIKD 410 Query: 876 PREYFDAQQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEV 697 PR+YFD QQANAL++LDD+R GTEQ KC+ T EE YGSL++SIS+IK+ GL + V PE+ Sbjct: 411 PRDYFDTQQANALKALDDSRIGTEQKKCSXTTEEAYGSLKESISKIKSIGLKNSTVAPEI 470 Query: 696 ALMVFNGLTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPIT 517 ALMV NGLTQNISS KYQLGKNP+ESILD LPN TKEELLHH MSIQELL+HFWS+YPIT Sbjct: 471 ALMVLNGLTQNISSTKYQLGKNPRESILDSLPNKTKEELLHHSMSIQELLRHFWSTYPIT 530 Query: 516 TTYLNTKVTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQ 337 T YL+TKV +LKDAMSQIYRQLE+IK +SDFRHQVSLLVRPMHQALDAAFQHY++DLQ Sbjct: 531 TAYLSTKVGKLKDAMSQIYRQLEEIK---ESDFRHQVSLLVRPMHQALDAAFQHYESDLQ 587 Query: 336 KRSARTGETPNG 301 KR+A PNG Sbjct: 588 KRAATVARMPNG 599 >ref|XP_008378918.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-3 isoform X1 [Malus domestica] Length = 626 Score = 814 bits (2102), Expect = 0.0 Identities = 429/634 (67%), Positives = 490/634 (77%), Gaps = 20/634 (3%) Frame = -1 Query: 2127 TKTKMSSREVIKRAKYKIS--VKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKG 1954 + + SSR V+KRA+YK + +K+PG PGVL M ENK +F+P+DPTS LDVEFRHIKG Sbjct: 3 SSSSSSSRRVVKRAQYKDAARLKNPGIPGVLTMVENKFVFKPNDPTSIQTLDVEFRHIKG 62 Query: 1953 HKHTKEGSNKPPWLNLPHDQG-GSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXX 1777 HK+TKEGS + P LNL + SYIFEF+SF DLH CR+FV N Sbjct: 63 HKNTKEGSKQAPLLNLSSSREVKSYIFEFQSFPDLHECRDFVANALSKASEAAKTGPKKV 122 Query: 1776 XXXXXXXXSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWAT 1597 VT DEQLS EMELRMKLL+E+SELQKLH QFVI GVLTESEFWAT Sbjct: 123 X------------VTLPDEQLSAAEMELRMKLLQEDSELQKLHMQFVISGVLTESEFWAT 170 Query: 1596 RKKLLDGDNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQA 1417 RKKLLDG+++ K KQRVGFKNSMILDTKP +DGR NKVTF+ TPEIKYQIF LKPAVHQA Sbjct: 171 RKKLLDGESHTKPKQRVGFKNSMILDTKPTSDGRMNKVTFNFTPEIKYQIFALKPAVHQA 230 Query: 1416 FLNFVPSKMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQK 1237 FL VPSKMT KDFW+KYFRAE+LHSTKN A+FLK+D+ILAREA QK Sbjct: 231 FLELVPSKMTAKDFWTKYFRAEFLHSTKNAAAIAAEAAEDEELAIFLKEDEILAREAHQK 290 Query: 1236 IRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEG 1057 IR+VDPTLDMEADQGDDYTHLPDHGIFRDGSKDI+E Q E Y+RTLSQDLNRQGAVVL+G Sbjct: 291 IRQVDPTLDMEADQGDDYTHLPDHGIFRDGSKDITELQNEQYRRTLSQDLNRQGAVVLQG 350 Query: 1056 RAVDVDLEDPRIVAQALVRSRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKD 877 R VD DLEDP VA+AL+RSR E +E+A QERL+RI+RM EI+DL+ P DH A LCIKD Sbjct: 351 RTVDGDLEDPNNVAEALMRSRQEPDESAVQERLDRITRMNEIDDLREPRDHRVAQLCIKD 410 Query: 876 PREYFDAQQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEV 697 PR+YFD QQANAL++LDD+R GTEQ KC+ T EE YGSL++SIS+IK+ GL + V PE+ Sbjct: 411 PRDYFDTQQANALKALDDSRIGTEQKKCSXTTEEAYGSLKESISKIKSIGLKNSTVAPEI 470 Query: 696 ALMVFNGLTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPIT 517 ALMV NGLTQNISS KYQLGKNP+ESILD LPN TKEELLHH MSIQELL+HFWS+YPIT Sbjct: 471 ALMVLNGLTQNISSTKYQLGKNPRESILDSLPNKTKEELLHHSMSIQELLRHFWSTYPIT 530 Query: 516 TTYLNTKVTRLKDAMSQIYRQLEDIKAS-----------------MQSDFRHQVSLLVRP 388 T YL+TKV +LKDAMSQIYRQLE+IK S +SDFRHQVSLLVRP Sbjct: 531 TAYLSTKVGKLKDAMSQIYRQLEEIKESDYSRPHLVGKGFVVVVIKESDFRHQVSLLVRP 590 Query: 387 MHQALDAAFQHYDADLQKRSARTGETPNGYS*EK 286 MHQALDAAFQHY++ LQKR+A T PNG + EK Sbjct: 591 MHQALDAAFQHYESALQKRAA-TARMPNGNAQEK 623 >ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed protein product [Vitis vinifera] Length = 602 Score = 812 bits (2097), Expect = 0.0 Identities = 417/612 (68%), Positives = 484/612 (79%), Gaps = 8/612 (1%) Frame = -1 Query: 2109 SREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKEGS 1930 S EV+KRA+YK SVKD G GVLKM E+K +F P+DPTS+ + DVEFR IKGHK +K GS Sbjct: 2 SGEVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGS 61 Query: 1929 NKPPWLNLPHD--QGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXX 1756 NKP LNL D +GG YIFEFE++ D +CREFVG Sbjct: 62 NKPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGS---------- 111 Query: 1755 XSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLDG 1576 E SAV DEQLST EME R+KLLRE+SELQKLHKQFV+ GVLTE+EFWATRKKLLDG Sbjct: 112 --EQSAVKLFDEQLSTIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDG 169 Query: 1575 DNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVPS 1396 + R KQRVGFK++MI D KP+TDGRTN+VTF+LTPEI +QIF KPAVHQAFLNFVP+ Sbjct: 170 NTSRTSKQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPN 229 Query: 1395 KMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDPT 1216 KMTEKDFW+KY RAEYLH T+N A+FLK DDILA EAR+KIRRVDPT Sbjct: 230 KMTEKDFWNKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPT 289 Query: 1215 LDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVDL 1036 LDMEADQGDDY HLPDHGIFRDGSK+I + Q E Y+RTLSQDLNR AVVLEGR +DV+L Sbjct: 290 LDMEADQGDDYMHLPDHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVEL 349 Query: 1035 EDPRIVAQALVRSR------PETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKDP 874 ED R VA+AL +S+ +++ + ++ERLERISRMTEIEDLQAP D PFA LCIKDP Sbjct: 350 EDTRTVAEALAKSKRVEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDP 409 Query: 873 REYFDAQQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVA 694 R+YFD+QQANAL++L DT AG++Q+KC+L+ +E YGSLR ISEIK+ GL+DPIVKP++A Sbjct: 410 RDYFDSQQANALKTLGDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIA 469 Query: 693 LMVFNGLTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITT 514 L V NGLTQNISS K+ LGKNPQES+LDRLP TKEELLHHW SIQELL+HFWSSYPITT Sbjct: 470 LKVLNGLTQNISSTKFHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITT 529 Query: 513 TYLNTKVTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQK 334 TYL TK +RLKDAMSQIY +L++IK S+QSDFRHQVSLLV+PM QALDAAF HYDAD QK Sbjct: 530 TYLYTKASRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQALDAAFAHYDADQQK 589 Query: 333 RSARTGETPNGY 298 RSAR+GE PNG+ Sbjct: 590 RSARSGERPNGF 601 >ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica] gi|462419824|gb|EMJ24087.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica] Length = 563 Score = 798 bits (2062), Expect = 0.0 Identities = 416/608 (68%), Positives = 468/608 (76%), Gaps = 1/608 (0%) Frame = -1 Query: 2115 MSSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKE 1936 MS R+V+KRA YK +KDPGTPGVL M ENK +FRP+DP+SA KLDVEF Sbjct: 1 MSCRQVVKRASYKSKIKDPGTPGVLTMTENKFVFRPNDPSSAAKLDVEF----------- 49 Query: 1935 GSNKPPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXX 1756 + GN Sbjct: 50 -------------------------------KHITGNALAKSGEAAKASSAAKPTSAAKT 78 Query: 1755 XSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLDG 1576 SE S VT DEQLST EM+LRMKLL+E+SELQKLH QFVI GVLTESEFWATRKKLLDG Sbjct: 79 TSEKSGVTLPDEQLSTAEMQLRMKLLQEDSELQKLHMQFVISGVLTESEFWATRKKLLDG 138 Query: 1575 DNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVPS 1396 D+ K KQRVGF++SMILDTKPMTDGR NKVTF+LTPEIKYQIF LKPAVHQAFL VPS Sbjct: 139 DSRTKSKQRVGFRSSMILDTKPMTDGRMNKVTFNLTPEIKYQIFALKPAVHQAFLTLVPS 198 Query: 1395 KMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDPT 1216 KMTEKDFW+KYFRAEYLHST+N A+FLK+D ILA EAR+KIRRVDPT Sbjct: 199 KMTEKDFWTKYFRAEYLHSTRNAVAAAAEAAEDEELAIFLKEDAILASEARRKIRRVDPT 258 Query: 1215 LDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVDL 1036 LDMEADQGDDYTHLPDHGIFRDGSKD++E Q E Y+RTLSQDLNRQGAVVL+GR VDVDL Sbjct: 259 LDMEADQGDDYTHLPDHGIFRDGSKDVTELQNELYRRTLSQDLNRQGAVVLQGRTVDVDL 318 Query: 1035 EDPRIVAQALVRSRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKDPREYFDA 856 EDPR VA+AL++SR E++E+A QERL+RI+RMTEIEDLQ HDHP A LCIKDPR+YFD Sbjct: 319 EDPRTVAEALMQSRRESDESAEQERLDRITRMTEIEDLQEHHDHPVAQLCIKDPRDYFDT 378 Query: 855 QQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVALMVFNG 676 QQ NAL++LDD+R GTEQ KC+LT EE YGSLR++IS+IK+ GL + V PE+A+ V NG Sbjct: 379 QQVNALKTLDDSRTGTEQKKCSLTTEEAYGSLREAISKIKSIGLKNSTVAPEIAITVLNG 438 Query: 675 LTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITTTYLNTK 496 LTQNISS KYQLGKNPQ+S+LD LPN TKEELLHHW+SIQELL+HFWSSYPITTTYL+TK Sbjct: 439 LTQNISSTKYQLGKNPQDSVLDSLPNKTKEELLHHWISIQELLRHFWSSYPITTTYLSTK 498 Query: 495 VTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQKRSART- 319 V RLKDAMSQIYRQLE+IK QSDFRHQVSLLVRPMHQALDAAFQH+DADLQKR+AR+ Sbjct: 499 VGRLKDAMSQIYRQLEEIK---QSDFRHQVSLLVRPMHQALDAAFQHFDADLQKRAARSG 555 Query: 318 GETPNGYS 295 GETPNG S Sbjct: 556 GETPNGNS 563 >ref|XP_012477564.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 [Gossypium raimondii] gi|763741668|gb|KJB09167.1| hypothetical protein B456_001G127200 [Gossypium raimondii] Length = 597 Score = 797 bits (2059), Expect = 0.0 Identities = 401/612 (65%), Positives = 480/612 (78%), Gaps = 6/612 (0%) Frame = -1 Query: 2115 MSSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKE 1936 M+S V KRAKYK ++KDPGTPG L+M K+LF P +P SA KLDVEFR+IKG KHTKE Sbjct: 1 MASTHVTKRAKYKTTIKDPGTPGTLRMTFEKILFVPHNPKSAGKLDVEFRYIKGQKHTKE 60 Query: 1935 GSNKPPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXX 1756 GSNKPPWLNL ++Q GS+IFEFE++SDL CR+FVG Sbjct: 61 GSNKPPWLNLTNNQNGSFIFEFENYSDLQECRDFVGKVLAKGGEVS-------------- 106 Query: 1755 XSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLDG 1576 E V++ DEQLS EMELR+KLL+E+SELQKLHKQFV+ GVLTE+EFWATRKKLLD Sbjct: 107 --EKPTVSYPDEQLSAAEMELRIKLLQEDSELQKLHKQFVLSGVLTETEFWATRKKLLDR 164 Query: 1575 DNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVPS 1396 + +K KQR+GFK++MI D KP TDGRTNKVTF+LTPE+ QIF KPAVH+AFL++VP+ Sbjct: 165 EVSKKTKQRLGFKSAMISDIKPSTDGRTNKVTFNLTPEVILQIFAEKPAVHRAFLSYVPN 224 Query: 1395 KMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDPT 1216 KM+E+ FW+KYFRAEYLHSTKN A+FLK DDILA EA++KIRRVDPT Sbjct: 225 KMSERTFWTKYFRAEYLHSTKNSIAAAAEAAEDEELAVFLKQDDILASEAQKKIRRVDPT 284 Query: 1215 LDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVDL 1036 LDMEAD+GDDYTHLPDHGIFR+G+K+++ESQ E YKR+LSQD+NR AVVLEGRAVDV+L Sbjct: 285 LDMEADEGDDYTHLPDHGIFREGNKEMTESQNELYKRSLSQDINRHAAVVLEGRAVDVEL 344 Query: 1035 EDPRIVAQALVRSRP------ETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKDP 874 ED + VA+AL +S+ E++ + S+ERL+R+SRMTEIEDLQ P+ P APLCIKDP Sbjct: 345 EDTKAVAEALAQSKQKSSNKGESDGDISRERLDRLSRMTEIEDLQGPNTLPLAPLCIKDP 404 Query: 873 REYFDAQQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVA 694 R+YFD+QQANALR+ D G EQ+KC L+ +EVYGSLR+SIS IK GL +PIVKPEVA Sbjct: 405 RDYFDSQQANALRTSGDALGGIEQIKCGLSTQEVYGSLRESISSIKAMGLKEPIVKPEVA 464 Query: 693 LMVFNGLTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITT 514 V + LT +IS+ KY +GKNPQES+LDRLP TKEELLHHW SI ELL+HFW+SYPITT Sbjct: 465 HQVLDALTNSISNTKYHIGKNPQESVLDRLPRKTKEELLHHWTSILELLKHFWASYPITT 524 Query: 513 TYLNTKVTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQK 334 TYL KV RLKDAMS IY QLE+IK S+ S+ RHQVSLLVRPMHQALDAA QHY+A +QK Sbjct: 525 TYLYAKVNRLKDAMSNIYPQLEEIKGSVPSELRHQVSLLVRPMHQALDAAIQHYEASMQK 584 Query: 333 RSARTGETPNGY 298 RSA++GE PNGY Sbjct: 585 RSAQSGERPNGY 596 >gb|KJB09170.1| hypothetical protein B456_001G127200 [Gossypium raimondii] Length = 598 Score = 792 bits (2046), Expect = 0.0 Identities = 401/613 (65%), Positives = 480/613 (78%), Gaps = 7/613 (1%) Frame = -1 Query: 2115 MSSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKE 1936 M+S V KRAKYK ++KDPGTPG L+M K+LF P +P SA KLDVEFR+IKG KHTKE Sbjct: 1 MASTHVTKRAKYKTTIKDPGTPGTLRMTFEKILFVPHNPKSAGKLDVEFRYIKGQKHTKE 60 Query: 1935 GSNKPPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXX 1756 GSNKPPWLNL ++Q GS+IFEFE++SDL CR+FVG Sbjct: 61 GSNKPPWLNLTNNQNGSFIFEFENYSDLQECRDFVGKVLAKGGEVS-------------- 106 Query: 1755 XSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLDG 1576 E V++ DEQLS EMELR+KLL+E+SELQKLHKQFV+ GVLTE+EFWATRKKLLD Sbjct: 107 --EKPTVSYPDEQLSAAEMELRIKLLQEDSELQKLHKQFVLSGVLTETEFWATRKKLLDR 164 Query: 1575 DNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVPS 1396 + +K KQR+GFK++MI D KP TDGRTNKVTF+LTPE+ QIF KPAVH+AFL++VP+ Sbjct: 165 EVSKKTKQRLGFKSAMISDIKPSTDGRTNKVTFNLTPEVILQIFAEKPAVHRAFLSYVPN 224 Query: 1395 KMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDPT 1216 KM+E+ FW+KYFRAEYLHSTKN A+FLK DDILA EA++KIRRVDPT Sbjct: 225 KMSERTFWTKYFRAEYLHSTKNSIAAAAEAAEDEELAVFLKQDDILASEAQKKIRRVDPT 284 Query: 1215 LDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVDL 1036 LDMEAD+GDDYTHLPDHGIFR+G+K+++ESQ E YKR+LSQD+NR AVVLEGRAVDV+L Sbjct: 285 LDMEADEGDDYTHLPDHGIFREGNKEMTESQNELYKRSLSQDINRHAAVVLEGRAVDVEL 344 Query: 1035 EDPRIVAQALVRSRP------ETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKDP 874 ED + VA+AL +S+ E++ + S+ERL+R+SRMTEIEDLQ P+ P APLCIKDP Sbjct: 345 EDTKAVAEALAQSKQKSSNKGESDGDISRERLDRLSRMTEIEDLQGPNTLPLAPLCIKDP 404 Query: 873 REYFDAQQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVA 694 R+YFD+QQANALR+ D G EQ+KC L+ +EVYGSLR+SIS IK GL +PIVKPEVA Sbjct: 405 RDYFDSQQANALRTSGDALGGIEQIKCGLSTQEVYGSLRESISSIKAMGLKEPIVKPEVA 464 Query: 693 LMVFNGLTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITT 514 V + LT +IS+ KY +GKNPQES+LDRLP TKEELLHHW SI ELL+HFW+SYPITT Sbjct: 465 HQVLDALTNSISNTKYHIGKNPQESVLDRLPRKTKEELLHHWTSILELLKHFWASYPITT 524 Query: 513 TYLNTKVTRLKDAMSQIYRQLE-DIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQ 337 TYL KV RLKDAMS IY QLE +IK S+ S+ RHQVSLLVRPMHQALDAA QHY+A +Q Sbjct: 525 TYLYAKVNRLKDAMSNIYPQLEVNIKGSVPSELRHQVSLLVRPMHQALDAAIQHYEASMQ 584 Query: 336 KRSARTGETPNGY 298 KRSA++GE PNGY Sbjct: 585 KRSAQSGERPNGY 597 >ref|XP_008457279.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X2 [Cucumis melo] Length = 533 Score = 783 bits (2023), Expect = 0.0 Identities = 391/541 (72%), Positives = 443/541 (81%) Frame = -1 Query: 2115 MSSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKE 1936 M ++ V K AKYK SVKDPGTPGVL+M E K +FRPSDPTSA+KLDVEFR IKGHK+TKE Sbjct: 1 MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKE 60 Query: 1935 GSNKPPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXX 1756 GSNKPPWLNL DQGGSYIFEF++FSDLH+CREFVG+ Sbjct: 61 GSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCREFVGS------------ALAKLGEAAQA 108 Query: 1755 XSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLDG 1576 SE EQLS +EMELRM+ L+E+SELQKLHKQFVIGGVLTESEFWA RKKLL+ Sbjct: 109 PSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLER 168 Query: 1575 DNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVPS 1396 D+ +K KQ +GFK+SM+LDTKPM+DGRTNKVTF+LTPEIKYQIF LKPAVHQAFLN VP+ Sbjct: 169 DSSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQAFLNHVPN 228 Query: 1395 KMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDPT 1216 KM+EKDFW+KYFRAEYLHSTKN A+FLKDD+ILA + R+KIR VDPT Sbjct: 229 KMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAADTRKKIRHVDPT 288 Query: 1215 LDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVDL 1036 LD+EAD GDDYTHLPDHGIFRDG K+I+ESQ EHY+RTLSQDLNRQGAVVLEGR +DVDL Sbjct: 289 LDLEADLGDDYTHLPDHGIFRDGGKEITESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDL 348 Query: 1035 EDPRIVAQALVRSRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKDPREYFDA 856 EDPR VA+ALVRSR N Q L+RISRMT IEDLQAPH HPFAPLCIKDPR+YFDA Sbjct: 349 EDPRTVAEALVRSRHAVEGNERQTALDRISRMTAIEDLQAPHSHPFAPLCIKDPRDYFDA 408 Query: 855 QQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVALMVFNG 676 QQANA+++LDDTRAG +Q KC+L+ E Y SLR+SISEIK+ G N PI+KPEVALMV+NG Sbjct: 409 QQANAIKTLDDTRAGMQQTKCSLSTTEAYCSLRESISEIKSSGFNHPIIKPEVALMVYNG 468 Query: 675 LTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITTTYLNTK 496 LTQNISS KYQLGKNPQESIL+ LPN TKEELLHHW+SIQELL+HFWSSYPITT+YL TK Sbjct: 469 LTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLKHFWSSYPITTSYLYTK 528 Query: 495 V 493 + Sbjct: 529 L 529 >ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 [Cicer arietinum] Length = 586 Score = 779 bits (2012), Expect = 0.0 Identities = 393/605 (64%), Positives = 467/605 (77%) Frame = -1 Query: 2112 SSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKEG 1933 SS++V+KRAKYK +VKDPGTPGVLK+ + KL+F+P+DPTS +++V+FR IK HKHTKEG Sbjct: 3 SSQQVVKRAKYKTTVKDPGTPGVLKLTQEKLVFKPNDPTSNNRVEVDFRLIKNHKHTKEG 62 Query: 1932 SNKPPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXXX 1753 SNKPPWLNL H QG SYIFE E+FSDLH+CRE VG Sbjct: 63 SNKPPWLNLGHSQG-SYIFELENFSDLHVCRELVG-------------------IALSKH 102 Query: 1752 SEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLDGD 1573 E V DEQLS EM LR+KLL+E+S+LQKLHK V G LTESEFWAT+KKLLD D Sbjct: 103 VEPPKVVS-DEQLSPAEMTLRIKLLQEDSKLQKLHKDLVASGKLTESEFWATKKKLLDQD 161 Query: 1572 NYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVPSK 1393 RKLKQR+GFKNS+I DTKP +DGR N+V F LTPEIKYQIF LKPAVHQAFLNFVPSK Sbjct: 162 ESRKLKQRIGFKNSLIFDTKPTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSK 221 Query: 1392 MTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDPTL 1213 M+E DFW+KYF+AEY+HSTKN A+FLKDD+IL EAR+K+RRVDPTL Sbjct: 222 MSEVDFWNKYFKAEYIHSTKNTIAAAAEAAEDEDLAVFLKDDEILENEARKKVRRVDPTL 281 Query: 1212 DMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVDLE 1033 DMEADQGDDYTHLPDHGIFRDGSK+ +E+Q Y+RTL QDLNRQ VVLEG+ +D+D+E Sbjct: 282 DMEADQGDDYTHLPDHGIFRDGSKETAEAQNTFYRRTLLQDLNRQSEVVLEGKTLDMDME 341 Query: 1032 DPRIVAQALVRSRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKDPREYFDAQ 853 PR VA+ L R + E++ +ER RIS+MT+IEDLQA DH FAPLCIKDPR+YFD+Q Sbjct: 342 HPRTVAEVLARRKQESDGVIEEERRNRISKMTQIEDLQAQDDHRFAPLCIKDPRDYFDSQ 401 Query: 852 QANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVALMVFNGL 673 Q NAL+SLDD+ AG EQ++CNL +EE YGSLR+SIS+IK GL DP++ PEVA V NGL Sbjct: 402 QVNALKSLDDSLAGKEQIRCNLGSEEAYGSLRESISKIKAIGLMDPLLSPEVAFKVLNGL 461 Query: 672 TQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITTTYLNTKV 493 T+NISS K LGK+ QES+LD LPNTTKE+LL HW+ QELL+HFWSSYP+TT L K Sbjct: 462 TKNISSTKSHLGKSSQESVLDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTTQNLVNKT 521 Query: 492 TRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQKRSARTGE 313 R+KDA+SQIY +LE+IK S +SD RHQVSL+V PM QALDAA HYDAD++KR+AR G Sbjct: 522 KRMKDAISQIYSKLEEIKVSAKSDLRHQVSLVVHPMQQALDAALLHYDADVRKRNAR-GT 580 Query: 312 TPNGY 298 PNGY Sbjct: 581 KPNGY 585 >ref|XP_007144178.1| hypothetical protein PHAVU_007G134900g [Phaseolus vulgaris] gi|561017368|gb|ESW16172.1| hypothetical protein PHAVU_007G134900g [Phaseolus vulgaris] Length = 588 Score = 777 bits (2007), Expect = 0.0 Identities = 394/608 (64%), Positives = 470/608 (77%), Gaps = 2/608 (0%) Frame = -1 Query: 2115 MSSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKE 1936 MSS +V+KR KYK +VKDPGT GVLK+ + K +F+P+DPTS KLDVEFR IK HKHTKE Sbjct: 1 MSSGQVVKRVKYKATVKDPGTSGVLKLTQEKFVFKPNDPTSNNKLDVEFRFIKSHKHTKE 60 Query: 1935 GSNKPPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXX 1756 GS KPPWLNL H Q GSYIFE +SF+DLH+CRE VG Sbjct: 61 GSGKPPWLNLTHAQ-GSYIFELDSFADLHVCRELVG-------------------IALSK 100 Query: 1755 XSEGSAVTHL-DEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLD 1579 +G A + +EQLS+ EM LR+KLL+E+S+LQ+LHK+ V G LTESEFWAT+KKLLD Sbjct: 101 HVQGEATKVISEEQLSSAEMTLRIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLD 160 Query: 1578 GDNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVP 1399 D RKLKQR+GFKNS+I DTKPM+DGR N+V F LTPEIKYQIF LKPAVHQAFLNFVP Sbjct: 161 QDESRKLKQRIGFKNSLIFDTKPMSDGRINQVKFQLTPEIKYQIFTLKPAVHQAFLNFVP 220 Query: 1398 SKMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDP 1219 SKM E DFW+KYF+AEYLHSTKN A+FLKDD+IL EAR+K+RRVDP Sbjct: 221 SKMNEVDFWNKYFKAEYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDP 280 Query: 1218 TLDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVD 1039 TLDMEADQGDDYTHLPDHGIFRDGSK+ISE+Q YKRTL QDLNRQGAVVLEG+ +D++ Sbjct: 281 TLDMEADQGDDYTHLPDHGIFRDGSKEISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDME 340 Query: 1038 LEDPRIVAQALVRSRPETNE-NASQERLERISRMTEIEDLQAPHDHPFAPLCIKDPREYF 862 +E+PR VA+ L R + E++E +ER RIS+MT IEDLQ+ DH +APLCIKDPR+YF Sbjct: 341 MENPRTVAEILARRKQESDEVVGDEERRNRISKMTPIEDLQSQDDHRYAPLCIKDPRDYF 400 Query: 861 DAQQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVALMVF 682 D QQANA+++LDD++ G EQM C+L +EE YGSLR SIS+I+T GL DP+ PEVAL V Sbjct: 401 DFQQANAVKTLDDSQPGMEQMMCSLGSEEAYGSLRASISKIQTTGLRDPLFSPEVALKVL 460 Query: 681 NGLTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITTTYLN 502 +GLT+NISS+KY LGK QES+LD LPNTTKE+LL HW+ QELL+H+WSSYP+TT L Sbjct: 461 HGLTKNISSSKYHLGKTSQESVLDILPNTTKEKLLDHWVCSQELLRHYWSSYPVTTQNLV 520 Query: 501 TKVTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQKRSAR 322 K RLKD++SQIY +LE+IK S QSD RHQVSL+V PM QALDAA HYDAD++KR+AR Sbjct: 521 NKTRRLKDSISQIYSKLEEIKVSAQSDLRHQVSLVVHPMQQALDAALLHYDADIRKRNAR 580 Query: 321 TGETPNGY 298 G NGY Sbjct: 581 -GSKSNGY 587 >ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1-like [Glycine max] gi|947042472|gb|KRG92196.1| hypothetical protein GLYMA_20G197500 [Glycine max] Length = 587 Score = 775 bits (2000), Expect = 0.0 Identities = 391/606 (64%), Positives = 469/606 (77%) Frame = -1 Query: 2115 MSSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKE 1936 MSSR+V+KRAKYK +VKDPGTPGVLK+ ++K +F+P+DPTS TKLDVEFR I+GHK TKE Sbjct: 1 MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDKFVFKPNDPTSKTKLDVEFRFIQGHKVTKE 60 Query: 1935 GSNKPPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXX 1756 GS KP WLNL H Q GSYIFE E+F+DLH+CRE VG Sbjct: 61 GSKKPAWLNLIHSQ-GSYIFELETFADLHVCRELVG-----------------VALNKQV 102 Query: 1755 XSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLDG 1576 E + V +EQLS EM L++KLL+E+S+LQ+LHK+ V G LTESEFWAT+KK+LD Sbjct: 103 PGEATKVIS-EEQLSPAEMALKIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKMLDQ 161 Query: 1575 DNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVPS 1396 D RKLKQ++GFKNS+I DTKPM+DGR N+V F LTPEIKYQIF LKPAVHQAFLNFVP Sbjct: 162 DESRKLKQQIGFKNSLIFDTKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPR 221 Query: 1395 KMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDPT 1216 KM E DFW+KYF+AEYLHSTKN A+FLKDD+IL EAR+K+RRVDPT Sbjct: 222 KMNEVDFWNKYFKAEYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPT 281 Query: 1215 LDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVDL 1036 LDMEADQGDDYTHLPDHGIFRDGSKDISE+Q YKRTL QDLNRQGAVVLEG+ +D+++ Sbjct: 282 LDMEADQGDDYTHLPDHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEM 341 Query: 1035 EDPRIVAQALVRSRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKDPREYFDA 856 E PR VA+ L R + E + +ER RIS+MT I+DLQA +HP+APLCIKDPR+YFD Sbjct: 342 EHPRTVAEILARRKQECDGVVDEERQNRISKMTLIDDLQAQDNHPYAPLCIKDPRDYFDF 401 Query: 855 QQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVALMVFNG 676 QQANA+++LDD++ G EQMKC+L +EE YGSLR SIS+IKT GL DP+ P+VAL V NG Sbjct: 402 QQANAVKTLDDSQTGMEQMKCSLGSEEAYGSLRASISKIKTTGLRDPLFSPDVALKVLNG 461 Query: 675 LTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITTTYLNTK 496 LT+NISS KY LG++ Q S+LD LPNTTKE LL HW+ QELL+HFWSSYPITT L K Sbjct: 462 LTKNISSPKYHLGRSSQGSVLDILPNTTKETLLDHWVCSQELLRHFWSSYPITTQNLVNK 521 Query: 495 VTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQKRSARTG 316 RLK+++SQIY +LEDIK S +SD RH VSL+V PM QAL+AA HY+AD++KR+AR G Sbjct: 522 TRRLKESISQIYSKLEDIKVSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNAR-G 580 Query: 315 ETPNGY 298 + PNGY Sbjct: 581 QKPNGY 586 >ref|XP_014514406.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 [Vigna radiata var. radiata] Length = 589 Score = 774 bits (1998), Expect = 0.0 Identities = 391/608 (64%), Positives = 465/608 (76%), Gaps = 2/608 (0%) Frame = -1 Query: 2115 MSSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKE 1936 MSS +V+KR KYK +VKDPGTPGVL++ + K +F+P+DPTS KLDVEFR IK HKHTKE Sbjct: 1 MSSGQVVKRVKYKATVKDPGTPGVLRLTQEKFVFKPNDPTSNNKLDVEFRFIKSHKHTKE 60 Query: 1935 GSNKPPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXX 1756 GS KPPWLNL H Q GSYIFE ESFSDLH+CRE VG Sbjct: 61 GSGKPPWLNLTHAQ-GSYIFELESFSDLHVCRELVG-------------------IALSK 100 Query: 1755 XSEGSAVTHL-DEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLD 1579 +G A + +EQLS+ EM LR+KLL+E+S+LQ LHK+ V G LTESEFWAT+KKLLD Sbjct: 101 HVQGEATKVISEEQLSSAEMTLRIKLLQEDSKLQTLHKELVASGKLTESEFWATKKKLLD 160 Query: 1578 GDNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVP 1399 D RKLKQR+GFKNS+I DTKPM+DGR N+V F LTPEIKYQIF LKPAVHQAFLNFVP Sbjct: 161 QDESRKLKQRIGFKNSLIFDTKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVP 220 Query: 1398 SKMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDP 1219 SKM E DFW+KYF+AEYLHSTKN A+FLKDD+IL EAR+K+RRVDP Sbjct: 221 SKMNEVDFWNKYFKAEYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDP 280 Query: 1218 TLDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVD 1039 TLDMEADQGDDYTHLPDHGIFRDGSK+ISE+Q YKRTL QDLNRQGAVVLEG+ +D++ Sbjct: 281 TLDMEADQGDDYTHLPDHGIFRDGSKEISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDME 340 Query: 1038 LEDPRIVAQALVRSRPETNE-NASQERLERISRMTEIEDLQAPHDHPFAPLCIKDPREYF 862 +E PR VA+ L R + +++E +ER RIS+MT IEDLQA DH +APLCIKDPR+YF Sbjct: 341 MEHPRTVAEILARRKQKSDEVVGDEERQNRISKMTPIEDLQAQDDHHYAPLCIKDPRDYF 400 Query: 861 DAQQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVALMVF 682 D QQANA+++LDD++ G EQM C+L +EE YGSL +IS+I+ GL DP+ P+VAL V Sbjct: 401 DFQQANAVKTLDDSQPGMEQMTCSLGSEEAYGSLMSAISKIQATGLRDPLFSPDVALKVL 460 Query: 681 NGLTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITTTYLN 502 +GLT+NISS KY LGK QES+LD LPNTTKE+LL HW+ QELL+HFWSSYP+TT L Sbjct: 461 HGLTKNISSTKYHLGKTSQESVLDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTTQNLV 520 Query: 501 TKVTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQKRSAR 322 K RLKD++SQIY +LE+IK S SD RHQVSL+V PM QALDAA HYDAD++KR+AR Sbjct: 521 NKTRRLKDSISQIYSKLEEIKVSASSDLRHQVSLVVHPMQQALDAALLHYDADIKKRNAR 580 Query: 321 TGETPNGY 298 + NGY Sbjct: 581 GSKKSNGY 588 >ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-3-like isoform X1 [Glycine max] gi|571483735|ref|XP_006589333.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-3-like isoform X2 [Glycine max] gi|947085868|gb|KRH34589.1| hypothetical protein GLYMA_10G193000 [Glycine max] gi|947085869|gb|KRH34590.1| hypothetical protein GLYMA_10G193000 [Glycine max] Length = 587 Score = 774 bits (1998), Expect = 0.0 Identities = 392/606 (64%), Positives = 472/606 (77%) Frame = -1 Query: 2115 MSSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKE 1936 MSSR+V+KRAKYK +VKDPGTPGVLK+ +++ +F+P+DPTS TKLDVEFR I+GHK TKE Sbjct: 1 MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDRFVFKPNDPTSKTKLDVEFRFIQGHKVTKE 60 Query: 1935 GSNKPPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXX 1756 GS +PP LNL Q GS IFE ESF+DLH+CRE VG Sbjct: 61 GSKQPPLLNLIRAQ-GSCIFELESFADLHVCRELVG-----------------FALNRNV 102 Query: 1755 XSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLDG 1576 E + V +EQLS EM LR+KLL+E+S+LQ+LHK+ V G LTESEFWAT+KKLLD Sbjct: 103 PGEATKVIS-EEQLSPAEMALRIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQ 161 Query: 1575 DNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVPS 1396 D RKLKQR+GFKNS+I DTKPM+DGR N+V F LTPEIKYQIF LKPAVHQAFLNFVPS Sbjct: 162 DESRKLKQRIGFKNSLIFDTKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPS 221 Query: 1395 KMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDPT 1216 KM E DFW+KYF+AEYLHSTKN A+FLKDD+IL EAR+K+RRVDPT Sbjct: 222 KMNEVDFWNKYFKAEYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPT 281 Query: 1215 LDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVDL 1036 LDMEADQGDDYTHLPDHGIFRDGSKDISE+Q YKRTL QDLNRQGAVVLEG+ +D+++ Sbjct: 282 LDMEADQGDDYTHLPDHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEM 341 Query: 1035 EDPRIVAQALVRSRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKDPREYFDA 856 E PR VA+ L R + E + +ER RIS+MT IEDLQA +HP+APLCIKDPR+YFD+ Sbjct: 342 EHPRTVAEILARRKQECDGVVDEERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDS 401 Query: 855 QQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVALMVFNG 676 QQANA+++LDD++AG EQMKC+L +EE Y SLR SIS+IKT GL DP+ P+VAL V NG Sbjct: 402 QQANAVKTLDDSQAGMEQMKCSLGSEEAYDSLRASISKIKTTGLRDPLFSPDVALKVLNG 461 Query: 675 LTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITTTYLNTK 496 LT+NI+S KY LGK+ QES+LD LPN+TKE+LL HW+ QELL+HFWSSYP++T L +K Sbjct: 462 LTKNITSTKYHLGKSSQESVLDILPNSTKEKLLDHWVCSQELLRHFWSSYPVSTQNLVSK 521 Query: 495 VTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQKRSARTG 316 RLKD++SQIY +LEDIK S +SD RH VSL+V PM QAL+AA HY+AD++KR+AR G Sbjct: 522 TRRLKDSISQIYSKLEDIKVSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNAR-G 580 Query: 315 ETPNGY 298 + PNGY Sbjct: 581 QKPNGY 586 >gb|KHN30690.1| Putative RNA polymerase II transcription factor B subunit 1-1 [Glycine soja] Length = 587 Score = 771 bits (1991), Expect = 0.0 Identities = 391/606 (64%), Positives = 471/606 (77%) Frame = -1 Query: 2115 MSSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKE 1936 MSSR+V+KRAKYK + KDPGTPGVLK+ +++ +F+P+DPTS TKLDVEFR I+GHK TKE Sbjct: 1 MSSRQVVKRAKYKTTGKDPGTPGVLKLTQDRFVFKPNDPTSKTKLDVEFRFIQGHKVTKE 60 Query: 1935 GSNKPPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXX 1756 GS +PP LNL Q GS IFE ESF+DLH+CRE VG Sbjct: 61 GSKQPPLLNLIRAQ-GSCIFELESFADLHVCRELVG-----------------FALNRNV 102 Query: 1755 XSEGSAVTHLDEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLDG 1576 E + V +EQLS EM LR+KLL+E+S+LQ+LHK+ V G LTESEFWAT+KKLLD Sbjct: 103 PGEATKVIS-EEQLSPAEMALRIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQ 161 Query: 1575 DNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVPS 1396 D RKLKQR+GFKNS+I DTKPM+DGR N+V F LTPEIKYQIF LKPAVHQAFLNFVPS Sbjct: 162 DESRKLKQRIGFKNSLIFDTKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPS 221 Query: 1395 KMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDPT 1216 KM E DFW+KYF+AEYLHSTKN A+FLKDD+IL EAR+K+RRVDPT Sbjct: 222 KMNEVDFWNKYFKAEYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPT 281 Query: 1215 LDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVDL 1036 LDMEADQGDDYTHLPDHGIFRDGSKDISE+Q YKRTL QDLNRQGAVVLEG+ +D+++ Sbjct: 282 LDMEADQGDDYTHLPDHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEM 341 Query: 1035 EDPRIVAQALVRSRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKDPREYFDA 856 E PR VA+ L R + E + +ER RIS+MT IEDLQA +HP+APLCIKDPR+YFD+ Sbjct: 342 EHPRTVAEILARRKQECDGVVDEERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDS 401 Query: 855 QQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEVALMVFNG 676 QQANA+++LDD++AG EQMKC+L +EE Y SLR SIS+IKT GL DP+ P+VAL V NG Sbjct: 402 QQANAVKTLDDSQAGMEQMKCSLGSEEAYDSLRASISKIKTTGLRDPLFSPDVALKVLNG 461 Query: 675 LTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPITTTYLNTK 496 LT+NI+S KY LGK+ QES+LD LPN+TKE+LL HW+ QELL+HFWSSYP++T L +K Sbjct: 462 LTKNITSTKYHLGKSSQESVLDILPNSTKEKLLDHWVCSQELLRHFWSSYPVSTQNLVSK 521 Query: 495 VTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQKRSARTG 316 RLKD++SQIY +LEDIK S +SD RH VSL+V PM QAL+AA HY+AD++KR+AR G Sbjct: 522 TRRLKDSISQIYSKLEDIKVSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNAR-G 580 Query: 315 ETPNGY 298 + PNGY Sbjct: 581 QKPNGY 586 >ref|XP_010032566.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 [Eucalyptus grandis] gi|629085607|gb|KCW51964.1| hypothetical protein EUGRSUZ_J01409 [Eucalyptus grandis] Length = 596 Score = 769 bits (1986), Expect = 0.0 Identities = 393/613 (64%), Positives = 470/613 (76%), Gaps = 7/613 (1%) Frame = -1 Query: 2115 MSSREVIKRAKYKISVKDPGTPGVLKMNENKLLFRPSDPTSATKLDVEFRHIKGHKHTKE 1936 M+S +VIKRAKYK +VKDPGT GVLKM ++ +F P+ P SA+ LDVEFR IKGHK+TKE Sbjct: 1 MASAQVIKRAKYKTTVKDPGTAGVLKMAWDRFIFTPNHPNSASNLDVEFRFIKGHKNTKE 60 Query: 1935 GSNKPPWLNLPHDQGGSYIFEFESFSDLHICREFVGNXXXXXXXXXXXXXXXXXXXXXXX 1756 GSNKPPWLNL +DQGGSYIFEFES+ DLH CR+FVG Sbjct: 61 GSNKPPWLNLTNDQGGSYIFEFESYPDLHTCRDFVGK-------------SIGRSGETPT 107 Query: 1755 XSEGSAVTHL-DEQLSTTEMELRMKLLRENSELQKLHKQFVIGGVLTESEFWATRKKLLD 1579 + G L DEQ+ST E+ELR+KLLRENSELQKLHKQ VIGG+LTE+EFWATRKKLLD Sbjct: 108 AASGKTDASLPDEQISTAELELRIKLLRENSELQKLHKQLVIGGILTEAEFWATRKKLLD 167 Query: 1578 GDNYRKLKQRVGFKNSMILDTKPMTDGRTNKVTFSLTPEIKYQIFVLKPAVHQAFLNFVP 1399 ++ RK KQRVGFK++MI D KP TDGRTNKVTFSLTPE+ QIF KPAVH AFL +VP Sbjct: 168 RESSRKSKQRVGFKSAMISDIKPATDGRTNKVTFSLTPEVILQIFAEKPAVHAAFLKYVP 227 Query: 1398 SKMTEKDFWSKYFRAEYLHSTKNXXXXXXXXXXXXXXAMFLKDDDILAREARQKIRRVDP 1219 +KMTEKDFW+KYF+AEYLHST+N A+FL++DDILA+EARQKIRRVDP Sbjct: 228 NKMTEKDFWTKYFKAEYLHSTRNAVAAAAEAAEDEELAIFLRNDDILAKEARQKIRRVDP 287 Query: 1218 TLDMEADQGDDYTHLPDHGIFRDGSKDISESQQEHYKRTLSQDLNRQGAVVLEGRAVDVD 1039 T++MEADQGDDY HLPDHG+FRDG KDI ESQ E Y+RTL+ DLNR AVVLEGR V+V+ Sbjct: 288 TVNMEADQGDDYMHLPDHGLFRDGGKDIIESQYELYRRTLAHDLNRHAAVVLEGRTVEVE 347 Query: 1038 LEDPRIVAQALVR------SRPETNENASQERLERISRMTEIEDLQAPHDHPFAPLCIKD 877 LED R VA+AL + + +++ A+Q LERI+R+TEIEDLQA H P APLCIKD Sbjct: 348 LEDTRTVAEALAKLKRVESANEDSDGTANQGILERIARITEIEDLQASHGPPLAPLCIKD 407 Query: 876 PREYFDAQQANALRSLDDTRAGTEQMKCNLTNEEVYGSLRKSISEIKTRGLNDPIVKPEV 697 PR+YFD+QQ A+++ E KCNL++ E YGSLR SIS+ K GL +P+VK + Sbjct: 408 PRDYFDSQQVIAVKA-----PAAEGKKCNLSSREAYGSLRDSISQTKQMGLLNPVVKTKD 462 Query: 696 ALMVFNGLTQNISSNKYQLGKNPQESILDRLPNTTKEELLHHWMSIQELLQHFWSSYPIT 517 AL VFN L+ +IS KY +GKNPQ+S+LD+LP+TTKE+LLHHW SIQELL+HFWSSYPIT Sbjct: 463 ALQVFNALSHDISRTKYDVGKNPQDSVLDKLPSTTKEQLLHHWTSIQELLRHFWSSYPIT 522 Query: 516 TTYLNTKVTRLKDAMSQIYRQLEDIKASMQSDFRHQVSLLVRPMHQALDAAFQHYDADLQ 337 ++YL KV RLKDAMSQIY QLE+IK S+ + + VS+LVR MHQALDAAFQHYDADLQ Sbjct: 523 SSYLYAKVNRLKDAMSQIYPQLEEIKKSVPAHHKQHVSVLVRQMHQALDAAFQHYDADLQ 582 Query: 336 KRSARTGETPNGY 298 KRSA++ E PNGY Sbjct: 583 KRSAKSSERPNGY 595