BLASTX nr result
ID: Ziziphus21_contig00009263
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00009263
(773 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KDO60003.1| hypothetical protein CISIN_1g043969mg [Citrus sin... 237 6e-60
ref|XP_006421917.1| hypothetical protein CICLE_v10004849mg [Citr... 237 6e-60
ref|XP_010107444.1| hypothetical protein L484_015785 [Morus nota... 233 1e-58
ref|XP_012440166.1| PREDICTED: pentatricopeptide repeat-containi... 233 1e-58
ref|XP_007038689.1| Pentatricopeptide repeat (PPR) superfamily p... 229 1e-57
ref|XP_010241402.1| PREDICTED: pentatricopeptide repeat-containi... 229 2e-57
emb|CDP12685.1| unnamed protein product [Coffea canephora] 229 2e-57
gb|KHG03451.1| hypothetical protein F383_28450 [Gossypium arboreum] 226 2e-56
ref|XP_008234250.1| PREDICTED: pentatricopeptide repeat-containi... 225 3e-56
ref|XP_010060986.1| PREDICTED: pentatricopeptide repeat-containi... 225 3e-56
ref|NP_191564.1| pentatricopeptide repeat-containing protein [Ar... 224 4e-56
ref|XP_012090261.1| PREDICTED: pentatricopeptide repeat-containi... 224 5e-56
gb|KDP22281.1| hypothetical protein JCGZ_26112 [Jatropha curcas] 224 5e-56
ref|XP_009587538.1| PREDICTED: pentatricopeptide repeat-containi... 223 1e-55
gb|KFK35585.1| hypothetical protein AALP_AA4G010000 [Arabis alpina] 223 1e-55
gb|AAF79508.1|AC002328_16 F20N2.6 [Arabidopsis thaliana] 223 1e-55
ref|XP_004231241.1| PREDICTED: pentatricopeptide repeat-containi... 223 1e-55
ref|XP_002894516.1| pentatricopeptide repeat-containing protein ... 223 1e-55
ref|NP_175959.1| pentatricopeptide repeat-containing protein [Ar... 223 1e-55
ref|XP_013687516.1| PREDICTED: pentatricopeptide repeat-containi... 223 1e-55
>gb|KDO60003.1| hypothetical protein CISIN_1g043969mg [Citrus sinensis]
Length = 300
Score = 237 bits (605), Expect = 6e-60
Identities = 113/203 (55%), Positives = 153/203 (75%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+++ L EM R GFSPD HTYNI+LHV G ++P+ AL +L+ MKE GF+P+VLHFT+L+
Sbjct: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC+ + M N+ CMPDVVCYTVMIT Y+AAGELEKAQ +F+ MI+ GQ
Sbjct: 158 DGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRGFC AGK +E ++++EM+ RGCNPN ++Y T++SNL+ + + H
Sbjct: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
++ + E K++ L + RY+R
Sbjct: 277 VIRHMVEKGKYIHLVSKFKRYKR 299
>ref|XP_006421917.1| hypothetical protein CICLE_v10004849mg [Citrus clementina]
gi|568874561|ref|XP_006490383.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g55630-like [Citrus sinensis]
gi|557523790|gb|ESR35157.1| hypothetical protein
CICLE_v10004849mg [Citrus clementina]
Length = 487
Score = 237 bits (605), Expect = 6e-60
Identities = 113/203 (55%), Positives = 153/203 (75%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+++ L EM R GFSPD HTYNI+LHV G ++P+ AL +L+ MKE GF+P+VLHFT+L+
Sbjct: 285 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 344
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC+ + M N+ CMPDVVCYTVMIT Y+AAGELEKAQ +F+ MI+ GQ
Sbjct: 345 DGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 403
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRGFC AGK +E ++++EM+ RGCNPN ++Y T++SNL+ + + H
Sbjct: 404 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 463
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
++ + E K++ L + RY+R
Sbjct: 464 VIRHMVEKGKYIHLVSKFKRYKR 486
>ref|XP_010107444.1| hypothetical protein L484_015785 [Morus notabilis]
gi|587928796|gb|EXC15982.1| hypothetical protein
L484_015785 [Morus notabilis]
Length = 498
Score = 233 bits (593), Expect = 1e-58
Identities = 115/203 (56%), Positives = 151/203 (74%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+++ L EM R GFSPD HTYNI+LHV G ++P+ AL +L+ MKE G +P VLHFT+LI
Sbjct: 296 QFHRLLDEMGRRGFSPDLHTYNILLHVLGKGDKPLAALNLLNHMKETGIDPGVLHFTTLI 355
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC + M ++ C+PDVVCYTVMITGYV AGELEKAQ++F++MI+ GQ
Sbjct: 356 DGLSRAGNLDACRFFFDEM-PKNGCIPDVVCYTVMITGYVVAGELEKAQSIFDEMITKGQ 414
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
+PNVFTY SMIRG C AGK EE S+L++M+ RGCNPN ++YTT++SNL+ + S H
Sbjct: 415 IPNVFTYNSMIRGLCMAGKFEEACSMLKDMESRGCNPNFLVYTTLVSNLRNAGKLSEAHQ 474
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
+V + E ++V L + YRR
Sbjct: 475 VVKHMVEKGQYVHLLSKFKGYRR 497
>ref|XP_012440166.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Gossypium raimondii]
gi|823214816|ref|XP_012440167.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g60050-like [Gossypium raimondii]
gi|763785722|gb|KJB52793.1| hypothetical protein
B456_008G277400 [Gossypium raimondii]
Length = 492
Score = 233 bits (593), Expect = 1e-58
Identities = 113/203 (55%), Positives = 152/203 (74%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+++ L EM R GFSPD HTYNI+LHV G ++P+ AL +L+ MKE G P VLHFT+LI
Sbjct: 290 QFHRLLDEMSRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGLNPGVLHFTTLI 349
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSR+GNL AC+ + MI ++ CMPDVVCYTV+ITG++AAGELEKAQ MF+ MI+ GQ
Sbjct: 350 DGLSRSGNLDACKYFFDEMI-KNGCMPDVVCYTVIITGFIAAGELEKAQEMFDDMITKGQ 408
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRG+C AGK EE ++L+EM+ RGCNPN ++Y+T++S+L+ + S
Sbjct: 409 LPNVFTYNSMIRGYCMAGKFEEACAILKEMEARGCNPNFVVYSTLVSHLRSAGKLSEARE 468
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
++ + E ++V L + RYRR
Sbjct: 469 VIRNMVEKGQYVHLLPKIRRYRR 491
Score = 59.3 bits (142), Expect = 3e-06
Identities = 36/167 (21%), Positives = 74/167 (44%)
Frame = -1
Query: 761 YHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLIDG 582
+ L EM+ +GF + T+NI++ G K + + K + P + +++
Sbjct: 187 WRLVDEMVENGFPTTARTFNILICACGETGLAKKVVERFIKSKTFNYRPFKHSYNAILHT 246
Query: 581 LSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQLP 402
L E + M+ + PD++ Y +++ G+L++ + ++M G P
Sbjct: 247 LLAINQYKLIEWVYQQMLAEG-FSPDILTYNIIMYAKYRLGKLDQFHRLLDEMSRSGFSP 305
Query: 401 NVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNL 261
+ TY ++ + K ++L MKE G NP + +TT++ L
Sbjct: 306 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGLNPGVLHFTTLIDGL 352
>ref|XP_007038689.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508775934|gb|EOY23190.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 488
Score = 229 bits (585), Expect = 1e-57
Identities = 112/203 (55%), Positives = 151/203 (74%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+++ L EM R GFSPD HTYNI+LHV G ++P+ A+ +L+ MKE G P VLHFT+LI
Sbjct: 286 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAVNLLNHMKEVGLNPGVLHFTTLI 345
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC+ + MI + CMPDVVCYTV+ITG++ AGEL+KAQ MF++MI+ GQ
Sbjct: 346 DGLSRAGNLDACKYFFDEMI-KIGCMPDVVCYTVIITGFIVAGELDKAQEMFDEMIANGQ 404
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRG+C AGK EE S+L+EM+ RGCNPN ++Y+T++S+L+ R S
Sbjct: 405 LPNVFTYNSMIRGYCMAGKFEEACSILKEMEARGCNPNFVVYSTLVSHLRNAGRLSEARE 464
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
++ + E ++V L + R+RR
Sbjct: 465 VIKNMVEKGQYVHLLSKIKRFRR 487
Score = 58.2 bits (139), Expect = 6e-06
Identities = 37/167 (22%), Positives = 74/167 (44%)
Frame = -1
Query: 761 YHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLIDG 582
+ L EMI +G+ + T+NI++ G A K + + K + P + +++
Sbjct: 183 WRLVDEMIENGYPTTARTFNILICTCGEAGLARKVVERFIKSKTFNYRPFKHSYNAILHT 242
Query: 581 LSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQLP 402
L E + M+ + PD + Y +++ G+L++ + ++M G P
Sbjct: 243 LLVVNQYKLIEWVYQQMLAEG-LAPDTLTYNILMCAEYRLGKLDQFHRLLDEMGRSGFSP 301
Query: 401 NVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNL 261
+ TY ++ + K ++L MKE G NP + +TT++ L
Sbjct: 302 DFHTYNILLHVLGKGDKPLAAVNLLNHMKEVGLNPGVLHFTTLIDGL 348
>ref|XP_010241402.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Nelumbo nucifera]
Length = 488
Score = 229 bits (583), Expect = 2e-57
Identities = 111/203 (54%), Positives = 149/203 (73%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+++ L EM R+GFSPD HTYNI+LHV G ++P+ AL +L+ MKE G +P+VLHFT+LI
Sbjct: 286 QFHRLLDEMGRNGFSPDLHTYNILLHVLGKGDKPLAALNLLNHMKEVGCDPSVLHFTTLI 345
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC+ + M+ + C PDVVCYTVMITGY+ AGELEKAQ MF++MI GQ
Sbjct: 346 DGLSRAGNLEACKYFFDEMVKKG-CTPDVVCYTVMITGYIIAGELEKAQQMFDEMIVKGQ 404
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRG C AG+ +E S+L EM+ RGCNPN ++Y+T++ NL+ + S H
Sbjct: 405 LPNVFTYNSMIRGLCMAGRFKEARSMLNEMESRGCNPNFVVYSTLVGNLRNAGKLSEAHE 464
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
++ ++ E ++ L + YRR
Sbjct: 465 IIGKMVEKGHYIHLLSKFKGYRR 487
Score = 63.2 bits (152), Expect = 2e-07
Identities = 38/167 (22%), Positives = 78/167 (46%)
Frame = -1
Query: 761 YHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLIDG 582
+ L EM +G+ + T+NI++ G A + + + K F P F +++
Sbjct: 183 WRLVDEMTENGYPTTAQTFNILICTCGEAGMARRLVERFIKSKNFNFRPFKHSFNAILHS 242
Query: 581 LSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQLP 402
L E + M+ + + PDV+ Y +++ G+L++ + ++M G P
Sbjct: 243 LLVINQYRLIEWVYQQMLLEGHS-PDVLTYNILMCAKYRLGKLDQFHRLLDEMGRNGFSP 301
Query: 401 NVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNL 261
++ TY ++ + K ++L MKE GC+P+ + +TT++ L
Sbjct: 302 DLHTYNILLHVLGKGDKPLAALNLLNHMKEVGCDPSVLHFTTLIDGL 348
>emb|CDP12685.1| unnamed protein product [Coffea canephora]
Length = 507
Score = 229 bits (583), Expect = 2e-57
Identities = 112/203 (55%), Positives = 148/203 (72%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+++ L EM ++GFSPD HTYN++LHV G ++P+ AL +L+ MKE +P +LHFT+LI
Sbjct: 305 QFHRLLDEMGQNGFSPDFHTYNLLLHVLGKGDKPLAALNLLNHMKEVSCDPTILHFTTLI 364
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC+ + MI Q CMPDVVCYTVMITGYV AGE + AQ MF++MIS GQ
Sbjct: 365 DGLSRAGNLDACKYFFDEMIKQG-CMPDVVCYTVMITGYVGAGEFDMAQEMFDEMISEGQ 423
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRG C AGK EE +L+EM+ RGCNPN ++Y+T++S L+ + S+ H
Sbjct: 424 LPNVFTYNSMIRGLCMAGKFEEACLMLKEMERRGCNPNFLVYSTLVSYLRNAGKLSQAHE 483
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
++ + E K+ L + RYRR
Sbjct: 484 IIKDMVEKGKYAHLVSKIKRYRR 506
Score = 63.2 bits (152), Expect = 2e-07
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 2/192 (1%)
Frame = -1
Query: 773 GVKYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTS 594
G K++ G+ ++ +S +++Y++++ + A E R+L EM KG+ + F
Sbjct: 165 GFKFFVWSGQ--QENYSHTTNSYHLIMKIFAEAEEFKAMWRLLDEMIHKGYPTSARTFNL 222
Query: 593 LIDGLSRAGNLAACEEILNLMINQS--NCMPDVVCYTVMITGYVAAGELEKAQTMFNKMI 420
LI AG ++++ I N P C+ ++ V + + ++ +M+
Sbjct: 223 LICTCGEAG---LAKKVIERFIKSKTFNYRPFKHCFNAILHSLVVLHHYKLIEWVYQQML 279
Query: 419 SVGQLPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDS 240
G P++ TY ++ R GKLE+ +L EM + G +P+ Y +L L ++
Sbjct: 280 VEGHSPDILTYNILLCSKYRQGKLEQFHRLLDEMGQNGFSPDFHTYNLLLHVLGKGDKPL 339
Query: 239 RTHGLVCQIKEM 204
L+ +KE+
Sbjct: 340 AALNLLNHMKEV 351
Score = 61.6 bits (148), Expect = 6e-07
Identities = 37/167 (22%), Positives = 76/167 (45%)
Frame = -1
Query: 761 YHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLIDG 582
+ L EMI G+ + T+N+++ G A K + + K + P F +++
Sbjct: 202 WRLLDEMIHKGYPTSARTFNLLICTCGEAGLAKKVIERFIKSKTFNYRPFKHCFNAILHS 261
Query: 581 LSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQLP 402
L + E + M+ + + PD++ Y +++ G+LE+ + ++M G P
Sbjct: 262 LVVLHHYKLIEWVYQQMLVEGHS-PDILTYNILLCSKYRQGKLEQFHRLLDEMGQNGFSP 320
Query: 401 NVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNL 261
+ TY ++ + K ++L MKE C+P + +TT++ L
Sbjct: 321 DFHTYNLLLHVLGKGDKPLAALNLLNHMKEVSCDPTILHFTTLIDGL 367
>gb|KHG03451.1| hypothetical protein F383_28450 [Gossypium arboreum]
Length = 526
Score = 226 bits (575), Expect = 2e-56
Identities = 109/192 (56%), Positives = 145/192 (75%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+++ L EM R GFSPD HTYNI+LHV G ++P+ AL +L+ MKE G P VLHFT+LI
Sbjct: 242 QFHRLLDEMSRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGLNPGVLHFTTLI 301
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC+ + MI ++ CMPDVVCYTV+ITG++AAGELEKAQ MF+ MI+ GQ
Sbjct: 302 DGLSRAGNLDACKYFFDEMI-KNGCMPDVVCYTVIITGFIAAGELEKAQEMFDDMITKGQ 360
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRG+C AGK EE ++L+EM+ RGCNPN ++Y+T++S+L+ + S
Sbjct: 361 LPNVFTYNSMIRGYCMAGKFEEACAILKEMEARGCNPNFVVYSTLVSHLRSAGKLSEARE 420
Query: 227 LVCQIKEMFKHV 192
++ + E +V
Sbjct: 421 VIRNMVEKGHYV 432
>ref|XP_008234250.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Prunus mume]
Length = 487
Score = 225 bits (573), Expect = 3e-56
Identities = 109/203 (53%), Positives = 148/203 (72%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+++ L EM R GF+PD HTYNI+LHV G ++P+ AL +L+ MKE GF+P+VLHFT+LI
Sbjct: 285 QFHRLLEEMGRSGFAPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLI 344
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC+ + MI C PDVVCYTVMI+GY+ AGELEKAQ +F++MI GQ
Sbjct: 345 DGLSRAGNLDACKYFFDEMIKHE-CFPDVVCYTVMISGYIVAGELEKAQGVFDEMIPNGQ 403
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY +MIRG C AGK EE S+L++M+ RGCNPN +Y+T++S L+ + ++ H
Sbjct: 404 LPNVFTYNAMIRGLCMAGKFEEACSMLKDMESRGCNPNFTVYSTLVSYLRNAGKRAKAHE 463
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
++ + E ++ L + YRR
Sbjct: 464 VITHMVEKGQYTHLLSKFKGYRR 486
Score = 59.7 bits (143), Expect = 2e-06
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 2/192 (1%)
Frame = -1
Query: 773 GVKYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTS 594
G K++ G++ + + ++TY++M+ + + E R++ EM EKG+ F+
Sbjct: 145 GYKFFVWSGQL--ENYRHTANTYHLMMKIFADCEEFKAMWRLVDEMIEKGYPTTAQTFSI 202
Query: 593 LIDGLSRAGNLAACEEILNLMINQS--NCMPDVVCYTVMITGYVAAGELEKAQTMFNKMI 420
LI AG ++++ I N P Y ++ V + + + ++ +M+
Sbjct: 203 LIRTCGEAG---LAKKVVERFIKSKTFNYRPFKHSYNAILHSLVVVKQYKLIEWVYQQML 259
Query: 419 SVGQLPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDS 240
+ G ++ TY M+ R GKL++ +L+EM G P+ Y +L L ++
Sbjct: 260 ADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFAPDFHTYNILLHVLGKGDKPL 319
Query: 239 RTHGLVCQIKEM 204
L+ +KE+
Sbjct: 320 AALNLLNHMKEV 331
Score = 58.9 bits (141), Expect = 4e-06
Identities = 42/189 (22%), Positives = 79/189 (41%)
Frame = -1
Query: 761 YHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLIDG 582
+ L EMI G+ + T++I++ G A K + + K + P + +++
Sbjct: 182 WRLVDEMIEKGYPTTAQTFSILIRTCGEAGLAKKVVERFIKSKTFNYRPFKHSYNAILHS 241
Query: 581 LSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQLP 402
L E + M+ +C D++ Y VM+ G+L++ + +M G P
Sbjct: 242 LVVVKQYKLIEWVYQQMLADGHCT-DILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFAP 300
Query: 401 NVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHGLV 222
+ TY ++ + K ++L MKE G +P+ + +TT++ L R
Sbjct: 301 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLIDGL---SRAGNLDACK 357
Query: 221 CQIKEMFKH 195
EM KH
Sbjct: 358 YFFDEMIKH 366
>ref|XP_010060986.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Eucalyptus grandis]
gi|702250370|ref|XP_010060995.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g60050-like [Eucalyptus grandis]
gi|702250375|ref|XP_010061003.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g60050-like [Eucalyptus grandis]
gi|702250381|ref|XP_010061012.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g60050-like [Eucalyptus grandis]
gi|629126277|gb|KCW90702.1| hypothetical protein
EUGRSUZ_A02787 [Eucalyptus grandis]
Length = 486
Score = 225 bits (573), Expect = 3e-56
Identities = 110/203 (54%), Positives = 150/203 (73%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+++ L EM R GFSPD HTYN++LHV G ++P+ AL +L+ M+E G +P+VLHFT+L+
Sbjct: 284 QFHRLLDEMGRRGFSPDFHTYNLLLHVLGKGDKPLAALSLLNHMREVGIDPSVLHFTTLM 343
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC+ + MI ++NC PDVVCYTV+ITGYV AGELEKA MFNKM+ GQ
Sbjct: 344 DGLSRAGNLDACKYFFDEMI-KNNCKPDVVCYTVLITGYVVAGELEKAIEMFNKMMIDGQ 402
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRG+C AG E S+L EM+ RGCNPN ++Y+T++S L+ + S+ H
Sbjct: 403 LPNVFTYNSMIRGYCMAGNFAEACSMLNEMEARGCNPNFLVYSTLVSYLRNAGKLSQAHS 462
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
++ ++ E ++V L + Y+R
Sbjct: 463 VIRRMVEKGQYVHLVSKFKGYKR 485
>ref|NP_191564.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181813|sp|Q9M1D8.1|PP288_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g60050 gi|7076758|emb|CAB75920.1| putative protein
[Arabidopsis thaliana] gi|332646485|gb|AEE80006.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 473
Score = 224 bits (572), Expect = 4e-56
Identities = 108/203 (53%), Positives = 149/203 (73%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
++ LF EM RDGFSPDS+TYNI+LH+ G N+P+ AL L+ MKE G +P+VLH+T+LI
Sbjct: 272 RFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLI 331
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC+ L+ M+ ++ C PDVVCYTVMITGYV +GEL+KA+ MF +M GQ
Sbjct: 332 DGLSRAGNLEACKYFLDEMV-KAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRG C AG+ E +L+EM+ RGCNPN ++Y+T++S L+ + S
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
++ ++ + +V L + ++YRR
Sbjct: 451 VIREMVKKGHYVHLVPKMMKYRR 473
Score = 67.4 bits (163), Expect = 1e-08
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 35/225 (15%)
Frame = -1
Query: 761 YHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLIDG 582
+ L EM++DGF + T+N+++ G A +A+ + K + P + ++++
Sbjct: 169 WRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNS 228
Query: 581 LSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEK--------------- 447
L E + M+ + PDV+ Y +++ G++++
Sbjct: 229 LLGVKQYKLIEWVYKQML-EDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSP 287
Query: 446 --------------------AQTMFNKMISVGQLPNVFTYTSMIRGFCRAGKLEELWSVL 327
A T N M VG P+V YT++I G RAG LE L
Sbjct: 288 DSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFL 347
Query: 326 QEMKERGCNPNSILYTTILSNLKVTERDSRTHGLVCQIKEMFKHV 192
EM + GC P+ + YT +++ V+ G + + KEMF+ +
Sbjct: 348 DEMVKAGCRPDVVCYTVMITGYVVS-------GELDKAKEMFREM 385
>ref|XP_012090261.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Jatropha curcas]
Length = 470
Score = 224 bits (571), Expect = 5e-56
Identities = 108/192 (56%), Positives = 144/192 (75%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
++Y L EM G SPD HTYNI LHV G N+PV+A ++L MK+ GF+P+VLHFT+LI
Sbjct: 277 QFYKLVDEMCSSGLSPDFHTYNIFLHVLGKGNKPVEAAKLLIYMKKVGFDPSVLHFTTLI 336
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC++ + MI ++ C PDVVCYTVMITGYV A +LEKAQ MF++M GQ
Sbjct: 337 DGLSRAGNLDACKDFFDEMI-KNGCKPDVVCYTVMITGYVEARQLEKAQAMFDEMTDRGQ 395
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY S+IRG C GK EE S+L++M+ RGCNPN ++Y+T++SNL+ + S H
Sbjct: 396 LPNVFTYNSLIRGLCNEGKFEEACSMLEKMESRGCNPNFLVYSTLVSNLRNAGKLSEAHE 455
Query: 227 LVCQIKEMFKHV 192
++ Q+KE +++
Sbjct: 456 VIKQMKEKGQYI 467
>gb|KDP22281.1| hypothetical protein JCGZ_26112 [Jatropha curcas]
Length = 424
Score = 224 bits (571), Expect = 5e-56
Identities = 108/192 (56%), Positives = 144/192 (75%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
++Y L EM G SPD HTYNI LHV G N+PV+A ++L MK+ GF+P+VLHFT+LI
Sbjct: 231 QFYKLVDEMCSSGLSPDFHTYNIFLHVLGKGNKPVEAAKLLIYMKKVGFDPSVLHFTTLI 290
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC++ + MI ++ C PDVVCYTVMITGYV A +LEKAQ MF++M GQ
Sbjct: 291 DGLSRAGNLDACKDFFDEMI-KNGCKPDVVCYTVMITGYVEARQLEKAQAMFDEMTDRGQ 349
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY S+IRG C GK EE S+L++M+ RGCNPN ++Y+T++SNL+ + S H
Sbjct: 350 LPNVFTYNSLIRGLCNEGKFEEACSMLEKMESRGCNPNFLVYSTLVSNLRNAGKLSEAHE 409
Query: 227 LVCQIKEMFKHV 192
++ Q+KE +++
Sbjct: 410 VIKQMKEKGQYI 421
>ref|XP_009587538.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Nicotiana tomentosiformis]
gi|697157568|ref|XP_009587539.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g60050-like [Nicotiana tomentosiformis]
Length = 497
Score = 223 bits (568), Expect = 1e-55
Identities = 108/203 (53%), Positives = 148/203 (72%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+++ L EM R+GFSPD HT+NI+LHV G ++P+ L +L+ MKE G EP++LHFT+LI
Sbjct: 295 QFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAVLNLLNHMKEVGCEPSILHFTTLI 354
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC+ M+ Q C+PDVVCYTVMITGYV AGEL+KAQ +F+ MI GQ
Sbjct: 355 DGLSRAGNLDACKYFFEEMVRQG-CVPDVVCYTVMITGYVVAGELDKAQELFSDMIVNGQ 413
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY +MIRG C A K +E +++EM+ RGCNPN ++Y+T++S LK + S+ H
Sbjct: 414 LPNVFTYNAMIRGLCMAEKFDEACMMVKEMESRGCNPNFMVYSTLVSYLKKAGKLSKAHE 473
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
++ + E +++ L + RYRR
Sbjct: 474 VIRHMVEKGQYIHLVPKFKRYRR 496
Score = 62.8 bits (151), Expect = 3e-07
Identities = 36/167 (21%), Positives = 78/167 (46%)
Frame = -1
Query: 761 YHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLIDG 582
+ L EMI G+ + T+N+++ G A K + + K + P F +++
Sbjct: 192 WRLVDEMIEKGYPTTARTFNLLICTCGEAGLARKVVERFIKSKTFNYRPFRHSFNAILHS 251
Query: 581 LSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQLP 402
L E + M+ + + +PD++ Y +++ G+L++ + ++M G P
Sbjct: 252 LLGVNQYRLIEWVYQQMLVEGH-LPDILTYNILLCSKYRLGKLDQFHRLLDEMGRNGFSP 310
Query: 401 NVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNL 261
+ T+ ++ + K + ++L MKE GC P+ + +TT++ L
Sbjct: 311 DFHTFNILLHVLGKGDKPLAVLNLLNHMKEVGCEPSILHFTTLIDGL 357
>gb|KFK35585.1| hypothetical protein AALP_AA4G010000 [Arabis alpina]
Length = 464
Score = 223 bits (568), Expect = 1e-55
Identities = 107/203 (52%), Positives = 146/203 (71%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+ Y L EM+++GFSPD +TYNI+LH N+P+ AL +L+ M+E G EP V+HFT+LI
Sbjct: 262 RVYRLLDEMVKEGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 321
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAG L AC+ ++ M+ + C PDVVCYTVMITGY++ GELEKA+ MF +M GQ
Sbjct: 322 DGLSRAGKLEACKYFMDEML-KVGCTPDVVCYTVMITGYISNGELEKAEEMFKEMTEKGQ 380
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRGFC AGK +E S+L+EM+ RGCNPN ++Y+T+++NL+ + H
Sbjct: 381 LPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRGCNPNFVVYSTLVNNLRNAGKVLEAHE 440
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
+V + E +V L + +YRR
Sbjct: 441 VVKDMVEKGHYVHLISKMKKYRR 463
Score = 65.9 bits (159), Expect = 3e-08
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Frame = -1
Query: 755 LFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLIDGLS 576
L EM++DG+ + T+N+++ G A + + K + P + +++ L
Sbjct: 159 LIDEMVKDGYPTTARTFNLLICTCGEAGLARDVVEQFVKSKSFSYRPYKHSYNAILHSLL 218
Query: 575 RAGNLAACEEILNLMINQSNCM-PDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQLPN 399
E + M+ SN PDV+ Y V++ G+ ++ + ++M+ G P+
Sbjct: 219 GVKQYKLIEWVYEQMLEDSNGFAPDVLTYNVVMFANFRLGKTDRVYRLLDEMVKEGFSPD 278
Query: 398 VFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNL 261
++TY ++ K ++L M+E G P I +TT++ L
Sbjct: 279 LYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 324
>gb|AAF79508.1|AC002328_16 F20N2.6 [Arabidopsis thaliana]
Length = 554
Score = 223 bits (568), Expect = 1e-55
Identities = 107/203 (52%), Positives = 145/203 (71%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+ Y L EM++DGFSPD +TYNI+LH N+P+ AL +L+ M+E G EP V+HFT+LI
Sbjct: 352 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 411
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAG L AC+ ++ + + C PDVVCYTVMITGY++ GELEKA+ MF +M GQ
Sbjct: 412 DGLSRAGKLEACKYFMDETV-KVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 470
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRGFC AGK +E ++L+EM+ RGCNPN ++Y+T+++NLK + H
Sbjct: 471 LPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHE 530
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
+V + E +V L + +YRR
Sbjct: 531 VVKDMVEKGHYVHLISKLKKYRR 553
Score = 59.3 bits (142), Expect = 3e-06
Identities = 34/165 (20%), Positives = 74/165 (44%)
Frame = -1
Query: 755 LFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLIDGLS 576
L EMI+DG+ + T+N+++ G A + + K + P + +++ L
Sbjct: 251 LIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLL 310
Query: 575 RAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQLPNV 396
+ + M+ + PDV+ Y +++ G+ ++ + ++M+ G P++
Sbjct: 311 GVKQYKLIDWVYEQML-EDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 369
Query: 395 FTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNL 261
+TY ++ K ++L M+E G P I +TT++ L
Sbjct: 370 YTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 414
>ref|XP_004231241.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like isoform X1 [Solanum lycopersicum]
gi|723662132|ref|XP_010312097.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g60050-like isoform X1 [Solanum lycopersicum]
gi|723662135|ref|XP_010312100.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g60050-like isoform X1 [Solanum lycopersicum]
Length = 491
Score = 223 bits (568), Expect = 1e-55
Identities = 109/203 (53%), Positives = 149/203 (73%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+++ L EM R+GFSPD +T+NI+LHV G ++P+ A+ +L+ MKE G+EP++LHFT+LI
Sbjct: 289 QFHRLLDEMGRNGFSPDLYTFNILLHVLGKGDKPLAAVNLLNHMKEVGYEPSILHFTTLI 348
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAGNL AC+ MI Q CMPDVVCYTVMITGYV AGEL+KAQ +F MI GQ
Sbjct: 349 DGLSRAGNLDACKYFFEEMIRQG-CMPDVVCYTVMITGYVVAGELDKAQELFTDMIVNGQ 407
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRG C A K +E +++EM+ RGCNPN ++Y+T++S LK + S+ H
Sbjct: 408 LPNVFTYNSMIRGLCMAEKFDEACMMVKEMELRGCNPNFMVYSTLVSYLKNAGKLSKAHE 467
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
++ + + +++ L + RYRR
Sbjct: 468 VIRHMVDKGQYIHLVPKFKRYRR 490
Score = 59.7 bits (143), Expect = 2e-06
Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 35/204 (17%)
Frame = -1
Query: 761 YHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLIDG 582
+ L EMI G+ + T+N+++ G A K + + K + P F +++
Sbjct: 186 WRLVDEMIEKGYPTTARTFNLLICTCGEAGLARKVVERFIKSKTFNYRPFRHSFNAILHS 245
Query: 581 LSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEK--------------- 447
L E + M+ + + +PD++ Y +++ G+L++
Sbjct: 246 LLGVNQYRLIEWVYQQMLVEGH-IPDILTYNILLCSKYRLGKLDQFHRLLDEMGRNGFSP 304
Query: 446 --------------------AQTMFNKMISVGQLPNVFTYTSMIRGFCRAGKLEELWSVL 327
A + N M VG P++ +T++I G RAG L+
Sbjct: 305 DLYTFNILLHVLGKGDKPLAAVNLLNHMKEVGYEPSILHFTTLIDGLSRAGNLDACKYFF 364
Query: 326 QEMKERGCNPNSILYTTILSNLKV 255
+EM +GC P+ + YT +++ V
Sbjct: 365 EEMIRQGCMPDVVCYTVMITGYVV 388
>ref|XP_002894516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297340358|gb|EFH70775.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 477
Score = 223 bits (568), Expect = 1e-55
Identities = 107/203 (52%), Positives = 144/203 (70%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+ Y L EM++DGFSPD +TYNI+LH N+P+ AL +L M+E G EP V+HFT+L+
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLTHMREVGVEPGVIHFTTLV 334
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAG L AC+ ++ M+ + C PDVVCYTVMITGY++ GELEKA+ MF +M GQ
Sbjct: 335 DGLSRAGKLEACKYFMDEMV-KVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 393
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRGFC AGK +E S+L+EM+ RGCNPN ++Y+T+++NL+ + H
Sbjct: 394 LPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRGCNPNFVVYSTLVNNLRNAGKVLEAHE 453
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
+V + E +V L +YRR
Sbjct: 454 IVKDMVEKGHYVHLISMFKKYRR 476
Score = 58.5 bits (140), Expect = 5e-06
Identities = 34/165 (20%), Positives = 74/165 (44%)
Frame = -1
Query: 755 LFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLIDGLS 576
L EMI+DG+ + T+N+++ G A + + K + P + +++ L
Sbjct: 174 LIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLL 233
Query: 575 RAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQLPNV 396
+ + M+ + PDV+ Y +++ G+ ++ + ++M+ G P++
Sbjct: 234 GVKQYKLIDWVYEQML-EDGFSPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 292
Query: 395 FTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNL 261
+TY ++ K ++L M+E G P I +TT++ L
Sbjct: 293 YTYNILLHHLATGNKPLAALNLLTHMREVGVEPGVIHFTTLVDGL 337
>ref|NP_175959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75140283|sp|Q7X6A5.1|PPR81_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g55630 gi|30793841|gb|AAP40373.1| unknown protein
[Arabidopsis thaliana] gi|30794021|gb|AAP40457.1|
unknown protein [Arabidopsis thaliana]
gi|110739296|dbj|BAF01561.1| hypothetical protein
[Arabidopsis thaliana] gi|332195155|gb|AEE33276.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 477
Score = 223 bits (568), Expect = 1e-55
Identities = 107/203 (52%), Positives = 145/203 (71%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
+ Y L EM++DGFSPD +TYNI+LH N+P+ AL +L+ M+E G EP V+HFT+LI
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAG L AC+ ++ + + C PDVVCYTVMITGY++ GELEKA+ MF +M GQ
Sbjct: 335 DGLSRAGKLEACKYFMDETV-KVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 393
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRGFC AGK +E ++L+EM+ RGCNPN ++Y+T+++NLK + H
Sbjct: 394 LPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHE 453
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
+V + E +V L + +YRR
Sbjct: 454 VVKDMVEKGHYVHLISKLKKYRR 476
Score = 59.3 bits (142), Expect = 3e-06
Identities = 34/165 (20%), Positives = 74/165 (44%)
Frame = -1
Query: 755 LFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLIDGLS 576
L EMI+DG+ + T+N+++ G A + + K + P + +++ L
Sbjct: 174 LIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLL 233
Query: 575 RAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQLPNV 396
+ + M+ + PDV+ Y +++ G+ ++ + ++M+ G P++
Sbjct: 234 GVKQYKLIDWVYEQML-EDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 292
Query: 395 FTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNL 261
+TY ++ K ++L M+E G P I +TT++ L
Sbjct: 293 YTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 337
>ref|XP_013687516.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55630
isoform X2 [Brassica napus]
gi|923801408|ref|XP_013687517.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g55630
isoform X2 [Brassica napus]
Length = 423
Score = 223 bits (567), Expect = 1e-55
Identities = 107/203 (52%), Positives = 146/203 (71%)
Frame = -1
Query: 767 KYYHLFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLI 588
K Y L EM++DGFSPD HTYNI+LH N+P+ AL +L+ M+E G EP+V+HFT+LI
Sbjct: 221 KLYRLLDEMVKDGFSPDLHTYNILLHHLATGNKPLAALNLLNHMREVGVEPSVIHFTTLI 280
Query: 587 DGLSRAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEKAQTMFNKMISVGQ 408
DGLSRAG L AC+ ++ M+ ++ C PDVVCYTV+ITGY++ GELEKA+ MF +M GQ
Sbjct: 281 DGLSRAGKLEACKYFMDEMV-KAGCTPDVVCYTVVITGYISGGELEKAEEMFREMTVKGQ 339
Query: 407 LPNVFTYTSMIRGFCRAGKLEELWSVLQEMKERGCNPNSILYTTILSNLKVTERDSRTHG 228
LPNVFTY SMIRGFC AGK +E +L+EM+ RGCNPN ++Y+T+++NL+ + H
Sbjct: 340 LPNVFTYNSMIRGFCMAGKFKEARLLLKEMESRGCNPNFVVYSTLVNNLRNAGKLLEAHE 399
Query: 227 LVCQIKEMFKHVRLARESVRYRR 159
+V + E +V L + +Y R
Sbjct: 400 VVKDMVEKGHYVHLISKFKKYTR 422
Score = 63.9 bits (154), Expect = 1e-07
Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 35/198 (17%)
Frame = -1
Query: 755 LFGEMIRDGFSPDSHTYNIMLHVHGNANEPVKALRVLHEMKEKGFEPNVLHFTSLIDGLS 576
L EMI+DG+ + T+N+++ G A + + + K + P + +++ L
Sbjct: 120 LVDEMIKDGYPTTARTFNLLICTCGEAGLAREVVEQFIKSKTFNYRPFKHSYNAILHSLQ 179
Query: 575 RAGNLAACEEILNLMINQSNCMPDVVCYTVMITGYVAAGELEK----------------- 447
+ E + + M+ + PDV+ Y V++ G+ +K
Sbjct: 180 GVKHYKLIEWVYDQML-EDGFSPDVLSYNVVMFASFRLGKTDKLYRLLDEMVKDGFSPDL 238
Query: 446 ------------------AQTMFNKMISVGQLPNVFTYTSMIRGFCRAGKLEELWSVLQE 321
A + N M VG P+V +T++I G RAGKLE + E
Sbjct: 239 HTYNILLHHLATGNKPLAALNLLNHMREVGVEPSVIHFTTLIDGLSRAGKLEACKYFMDE 298
Query: 320 MKERGCNPNSILYTTILS 267
M + GC P+ + YT +++
Sbjct: 299 MVKAGCTPDVVCYTVVIT 316