BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00007304
         (1430 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009335010.1| PREDICTED: DNA-directed RNA polymerases II, ...   578   e-162
ref|XP_008373098.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   577   e-162
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerases II, ...   576   e-161
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   575   e-161
ref|XP_009350515.1| PREDICTED: DNA-directed RNA polymerases II, ...   574   e-161
ref|XP_007042502.1| DNA-directed RNA polymerase family protein [...   574   e-161
ref|XP_007201816.1| hypothetical protein PRUPE_ppa008812mg [Prun...   573   e-160
ref|XP_008236569.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   571   e-160
ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, ...   569   e-159
gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -li...   569   e-159
ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, ...   569   e-159
ref|XP_008367672.1| PREDICTED: DNA-directed RNA polymerases II, ...   566   e-158
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr...   566   e-158
ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerases II, ...   562   e-157
ref|XP_008441761.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   561   e-157
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   558   e-156
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, ...   556   e-155
ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, ...   555   e-155
gb|AIA09926.1| RNA polymerase II [Quercus suber]                      554   e-155
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerases II, ...   552   e-154

>ref|XP_009335010.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Pyrus x bretschneideri]
          Length = 318

 Score =  578 bits (1490), Expect = e-162
 Identities = 286/316 (90%), Positives = 306/316 (96%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            GKSYQR P+VKIR+M+DDYLKFELR+TDAS+ANALRRVMIAEVPT+ IDLVEIE+NSSVL
Sbjct: 3    GKSYQRLPRVKIRDMRDDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTS+RAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDL SSDHTVVPVDFSDS+G +SSE +GIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KDLLSSDHTVVPVDFSDSSGLESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEPDIRINEELMDTLT EEK+ WVDSSPTKVFDIDP T +VVVVDPEAYTYD+E
Sbjct: 183  ATVTFMYEPDIRINEELMDTLTLEEKKAWVDSSPTKVFDIDPKTDKVVVVDPEAYTYDDE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            VIKKA+AMGK GLVDI+A+EDSFIFTVESTGAIKA+QLLLNAIEVLKQKLDAVRLS+DTV
Sbjct: 243  VIKKAEAMGKSGLVDISAREDSFIFTVESTGAIKAAQLLLNAIEVLKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 303  EADDQFGELGAHMRGG 318


>ref|XP_008373098.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV
            and V subunit 3-like [Malus domestica]
          Length = 318

 Score =  577 bits (1487), Expect = e-162
 Identities = 286/316 (90%), Positives = 305/316 (96%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            GKSYQR P+VKIREM+DDY+KFELR+TDAS+ANALRRVMIAEVPT+ IDLVEIE+NSSVL
Sbjct: 3    GKSYQRLPRVKIREMRDDYVKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTS+RAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDL SSDHTVVPVDFSDSAG +SSE +GIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KDLLSSDHTVVPVDFSDSAGLESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEPDIRINEELMDTLT EEK+ WVDSSPTKVFDIDP T +VVVVDPEAYTYD+E
Sbjct: 183  ATVTFMYEPDIRINEELMDTLTLEEKKAWVDSSPTKVFDIDPKTDKVVVVDPEAYTYDDE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            VIKKA+AMGK GLVDI+A+EDSFIFTVESTGAIKA+QLLLNAIEVLKQKLDAVRLS+DTV
Sbjct: 243  VIKKAEAMGKSGLVDISAREDSFIFTVESTGAIKAAQLLLNAIEVLKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
             ADDQFGELGAHMRGG
Sbjct: 303  XADDQFGELGAHMRGG 318


>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Fragaria vesca subsp. vesca]
          Length = 318

 Score =  576 bits (1484), Expect = e-161
 Identities = 283/316 (89%), Positives = 307/316 (97%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            GKSYQRFP+VKIREM+ DYLKFELR+TDAS+ANALRRVMIAEVPT+ IDLVEIE+NSSVL
Sbjct: 3    GKSYQRFPRVKIREMRHDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTS+RAMSMRFSRDCDACDGDGQCE+CSVEFHLRA+CHSDQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRARCHSDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            K+L SSDHTVVPVDFSD++GY++SE RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KELLSSDHTVVPVDFSDASGYEASEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEPDIRINEE+MDTL+ E+K  WVDSSPTKVF+IDPNT +VVVVDPEAYTYD+E
Sbjct: 183  ATVTFMYEPDIRINEEMMDTLSLEDKAAWVDSSPTKVFEIDPNTGKVVVVDPEAYTYDDE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            VIKKA+AMGK GLVDITAKEDSFIFTVESTGAIKASQLLLNAIE+LKQKLDAVRLS+DTV
Sbjct: 243  VIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEILKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 303  EADDQFGELGAHMRGG 318


>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 318

 Score =  575 bits (1481), Expect = e-161
 Identities = 283/316 (89%), Positives = 306/316 (96%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            G SYQRFP++KIRE+KDDY KFELR+TDASMANALRRVMIAEVPT+ IDLVEIEVNSSVL
Sbjct: 3    GASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTSERAMSMRFSRDCDACDGDGQC++CSVEFHLRAKC +DQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDLYSSDHTVVPVDFSDS+GYDSSE RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KDLYSSDHTVVPVDFSDSSGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEPDI INE+LM++L+ EEK++WV+SSPTKVFDIDPNT QVVVVDPEAYTYDEE
Sbjct: 183  ATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAYTYDEE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            VIKKA++MGK GLV+I AKEDSFIFTVESTGAIKASQL+LNAIE+LKQKLDAVRLS+DTV
Sbjct: 243  VIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 303  EADDQFGELGAHMRGG 318


>ref|XP_009350515.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Pyrus x bretschneideri]
          Length = 318

 Score =  574 bits (1480), Expect = e-161
 Identities = 285/316 (90%), Positives = 305/316 (96%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            GKSYQR P+VKIREM+DD LKFELR+TDAS+ANALRRVMIAEVPT+ IDLVEIE+NSSVL
Sbjct: 3    GKSYQRLPRVKIREMRDDSLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTS+RAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDL SSDHTVVPVDFSDS+G++SSE +GIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KDLLSSDHTVVPVDFSDSSGFESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEPDIRINEELMDTLT EEK+ WV+SSPTKVFDIDP T +VVVVD EAYTYD+E
Sbjct: 183  ATVTFMYEPDIRINEELMDTLTLEEKKAWVESSPTKVFDIDPKTDKVVVVDAEAYTYDDE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            VIKKA+AMGK GLVDITA+EDSFIFTVESTGAIKA+QLLLNAIEVLKQKLDAVRLS+DTV
Sbjct: 243  VIKKAEAMGKSGLVDITAREDSFIFTVESTGAIKAAQLLLNAIEVLKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 303  EADDQFGELGAHMRGG 318


>ref|XP_007042502.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
            gi|508706437|gb|EOX98333.1| DNA-directed RNA polymerase
            family protein [Theobroma cacao]
          Length = 318

 Score =  574 bits (1480), Expect = e-161
 Identities = 286/316 (90%), Positives = 306/316 (96%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            G SYQRFPKVKIRE+KDDY KFELR+TDASMANALRRVMIAEVPTI IDLVEIEVNSSVL
Sbjct: 3    GVSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC +DQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDLYSSDHTVVPVDF+DSAGYDSSE RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KDLYSSDHTVVPVDFTDSAGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEP+I INE++M+TLT EEK+++V+SSPT+VFDIDPNT QVVVVDPEAYTYD+E
Sbjct: 183  ATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDPEAYTYDDE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            V+KKA+AMGK GLV+I AKEDSFIFTVESTGAIKASQL+LNAIEVLKQKLDAVRLS+DTV
Sbjct: 243  VLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 303  EADDQFGELGAHMRGG 318


>ref|XP_007201816.1| hypothetical protein PRUPE_ppa008812mg [Prunus persica]
            gi|462397216|gb|EMJ03015.1| hypothetical protein
            PRUPE_ppa008812mg [Prunus persica]
          Length = 318

 Score =  573 bits (1476), Expect = e-160
 Identities = 282/316 (89%), Positives = 303/316 (95%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            GKSYQR P+VKIREM+DDY+KFELR+TDAS+ANALRRVMIAEVPT+ IDLVEIE+NSSVL
Sbjct: 3    GKSYQRLPRVKIREMRDDYMKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTS+RAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDL SSDHTVVPVDFSDSAG +SSE +GIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KDLLSSDHTVVPVDFSDSAGMESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEPDIRINEELMD LT +EK+ WV+SSPTKVFD DP T +V+VVDPEAYTYD+E
Sbjct: 183  ATVTFMYEPDIRINEELMDMLTLDEKKAWVESSPTKVFDFDPKTEKVMVVDPEAYTYDDE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            VIKKA+AMGK GLVDI AKEDSFIFTVESTGA+KASQLLLNAIE+LKQKLDAVRLS+DTV
Sbjct: 243  VIKKAEAMGKPGLVDIIAKEDSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 303  EADDQFGELGAHMRGG 318


>ref|XP_008236569.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV
            and V subunit 3-like [Prunus mume]
          Length = 318

 Score =  571 bits (1471), Expect = e-160
 Identities = 283/316 (89%), Positives = 301/316 (95%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            GKSYQR P+VKIREM+DDY+KFELR+TDAS+ANALRRVMIAEVPT+ IDLVEIE+NSSVL
Sbjct: 3    GKSYQRLPRVKIREMRDDYMKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTS RAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSARAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDL SSDHTVVPVDFSDSAG +SSE +GIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KDLLSSDHTVVPVDFSDSAGMESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEPDI INEELMD LT +EK+ WV+SSPTKVFD DP T +VVVVDPEAYTYD+E
Sbjct: 183  ATVTFMYEPDIXINEELMDMLTLDEKKAWVESSPTKVFDFDPKTEKVVVVDPEAYTYDDE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            VIKKA+AMGK GLVDI AKEDSFIFTVESTGA+KASQLLLNAIEVLKQKLDAVRLS+DTV
Sbjct: 243  VIKKAEAMGKPGLVDIIAKEDSFIFTVESTGAVKASQLLLNAIEVLKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 303  EADDQFGELGAHMRGG 318


>ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Gossypium raimondii] gi|763810754|gb|KJB77656.1|
            hypothetical protein B456_012G149200 [Gossypium
            raimondii]
          Length = 318

 Score =  569 bits (1467), Expect = e-159
 Identities = 281/316 (88%), Positives = 304/316 (96%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            G SYQRFP+VKIRE+KDDY KFEL +TDASMANALRRVMIAEVPTI IDLVEIEVNSSVL
Sbjct: 3    GASYQRFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTS+RAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC SDQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDLYSSDHTVVPVDF+DSAGY+SSE RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KDLYSSDHTVVPVDFTDSAGYESSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEP+I INE++MDTLT EEK+++VDSSPT+VFDIDPNT QVVVVDPEAYTYD+E
Sbjct: 183  ATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQVVVVDPEAYTYDDE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            V+KKA+AMGK GLV+I AKEDSFIFT+ESTGA+KA QL+LNAIE+LKQKLDAVRLS+DTV
Sbjct: 243  VLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKAFQLVLNAIEILKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 303  EADDQFGELGAHMRGG 318


>gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -like protein
            [Gossypium arboreum]
          Length = 318

 Score =  569 bits (1467), Expect = e-159
 Identities = 281/316 (88%), Positives = 304/316 (96%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            G SYQRFP+VKIRE+KDDY KFEL +TDASMANALRRVMIAEVPTI IDLVEIEVNSSVL
Sbjct: 3    GASYQRFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTS+RAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC SDQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDLYSSDHTVVPVDF+D AGY+SSE RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KDLYSSDHTVVPVDFTDYAGYESSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEP+I INE++MDTLT EEK+++VDSSPT+VFDIDPNT QVVVVDPEAYTYD+E
Sbjct: 183  ATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQVVVVDPEAYTYDDE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            V+KKA+AMGK GLV+I AKEDSFIFT+ESTGA+KASQL+LNAIE+LKQKLDAVRLS+DTV
Sbjct: 243  VLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKASQLVLNAIEILKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 303  EADDQFGELGAHMRGG 318


>ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Gossypium raimondii] gi|728821384|gb|KHG04309.1|
            DNA-directed RNA polymerase II subunit RPB3-A -like
            protein [Gossypium arboreum] gi|763780305|gb|KJB47376.1|
            hypothetical protein B456_008G023500 [Gossypium
            raimondii]
          Length = 318

 Score =  569 bits (1467), Expect = e-159
 Identities = 284/316 (89%), Positives = 305/316 (96%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            G SYQRFPKVKIRE+KDDY KFELR+TDASMANALRRVMI+EVPTI IDLVEIEVNSSVL
Sbjct: 3    GISYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMISEVPTIAIDLVEIEVNSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC SDQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDLYSSDHTVVPVDF+D+AGYDS+E RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KDLYSSDHTVVPVDFTDNAGYDSTEPRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEP+I INE+LM++LT EEK ++V+SSPTKVFDIDPNT QVVVVDPEAYTYD+E
Sbjct: 183  ATVTFMYEPEIHINEDLMESLTLEEKLSFVESSPTKVFDIDPNTQQVVVVDPEAYTYDDE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            V+KKA+AMGK GLV+I AKEDSFIFTVESTGAIKASQL+LNAIE+LKQKLDAVRLS+DTV
Sbjct: 243  VLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 303  EADDQFGELGAHMRGG 318


>ref|XP_008367672.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Malus domestica]
          Length = 318

 Score =  567 bits (1460), Expect = e-158
 Identities = 280/316 (88%), Positives = 302/316 (95%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            GKSYQR P+VKIREM+DDYLKFELR+TDAS+ANALRRVMIAEVPT+ IDLVEIE+NSSVL
Sbjct: 3    GKSYQRLPRVKIREMRDDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTS+RAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDL SSDHTVVPVDFSDS+G++SSE +G    ++ RGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KDLLSSDHTVVPVDFSDSSGFESSEQKGNYNCEVARGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEPDIRINEELMDTLT EEK+ WV+SSPTKVFDIDP T +VVVVDPEAYTYD+E
Sbjct: 183  ATVTFMYEPDIRINEELMDTLTLEEKKAWVESSPTKVFDIDPKTDKVVVVDPEAYTYDDE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            VIKKA+AMGK GLVDITA+EDSFIFTVESTGAIKA+QLLLNAIEVLKQKLDAVRLS+DTV
Sbjct: 243  VIKKAEAMGKSGLVDITAREDSFIFTVESTGAIKAAQLLLNAIEVLKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 303  EADDQFGELGAHMRGG 318


>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
            gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
            RNA polymerases II, IV and V subunit 3-like [Citrus
            sinensis] gi|557524889|gb|ESR36195.1| hypothetical
            protein CICLE_v10028849mg [Citrus clementina]
            gi|641840877|gb|KDO59794.1| hypothetical protein
            CISIN_1g020936mg [Citrus sinensis]
            gi|641840878|gb|KDO59795.1| hypothetical protein
            CISIN_1g020936mg [Citrus sinensis]
          Length = 319

 Score =  566 bits (1458), Expect = e-158
 Identities = 284/317 (89%), Positives = 303/317 (95%), Gaps = 1/317 (0%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            G SYQRFPKVKIRE+KDDY KFELR+TDASMANALRRVMIAEVPTI IDLVEIEVNSSVL
Sbjct: 3    GASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSEN-RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSP 715
            KDLYSSDH+VVPVDF D AGYDS++  RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSP
Sbjct: 123  KDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSP 182

Query: 714  AATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDE 535
            AATVTFMYEP+I INE+LM++L+ EEK++WV+SSPTKVFDIDPNT QV VVD EAYTYD+
Sbjct: 183  AATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTYDD 242

Query: 534  EVIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDT 355
            EVIKKA+AMGK GLV+I AKEDSFIFTVESTGAIKASQL+LNAIEVLKQKLDAVRLS+DT
Sbjct: 243  EVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSEDT 302

Query: 354  VEADDQFGELGAHMRGG 304
            VEADDQFGELGAHMRGG
Sbjct: 303  VEADDQFGELGAHMRGG 319


>ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Cucumis sativus] gi|700206224|gb|KGN61343.1|
            hypothetical protein Csa_2G093850 [Cucumis sativus]
          Length = 320

 Score =  562 bits (1449), Expect = e-157
 Identities = 280/318 (88%), Positives = 301/318 (94%), Gaps = 2/318 (0%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            G SYQRFPKVKIRE++DDY KFELR+TDASMANALRRVMIAEVPTI IDLVEIEVNSSVL
Sbjct: 3    GSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGY--DSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 718
            KDLYSSDHTVVPVDFSDSA    ++ + +GIIIVKLRRGQELRLRAIARKGIGKDHAKWS
Sbjct: 123  KDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 182

Query: 717  PAATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYD 538
            PAATVTFMYEP I INE+LM+TLT EEKR WV+S PT+VF++D  THQV+VVDPEAYTYD
Sbjct: 183  PAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYTYD 242

Query: 537  EEVIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDD 358
            +EVIKKA+AMGK GLVDITA+EDSFIFTVESTGAIKASQL+LNAI++LKQKLDAVRLSDD
Sbjct: 243  DEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLSDD 302

Query: 357  TVEADDQFGELGAHMRGG 304
            TVEADDQFGELGAHMRGG
Sbjct: 303  TVEADDQFGELGAHMRGG 320


>ref|XP_008441761.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV
            and V subunit 3-like [Cucumis melo]
          Length = 320

 Score =  561 bits (1447), Expect = e-157
 Identities = 279/318 (87%), Positives = 301/318 (94%), Gaps = 2/318 (0%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            G SYQRFPKVKIRE++DDY KFELR+TDASMANALRRVMIAEVPTI IDLVEIEVNSSVL
Sbjct: 3    GSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGY--DSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 718
            KDLYSSDHTVVPVDFSDSA    ++ + +GIIIVKLRRGQELRLRAIARKGIGKDHAKWS
Sbjct: 123  KDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 182

Query: 717  PAATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYD 538
            PAATVTFMYEP I INE+LM+TLT EEK  WV+S PT+VF++DP THQV+VV+PEAYTYD
Sbjct: 183  PAATVTFMYEPSIHINEDLMETLTLEEKXTWVESCPTRVFELDPVTHQVMVVEPEAYTYD 242

Query: 537  EEVIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDD 358
            +EVIKKA+AMGK GLVDITA+EDSFIFTVESTGAIKASQL+LNAI++LKQKLDAVRLSDD
Sbjct: 243  DEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLSDD 302

Query: 357  TVEADDQFGELGAHMRGG 304
            TVEADDQFGELGAHMRGG
Sbjct: 303  TVEADDQFGELGAHMRGG 320


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  558 bits (1437), Expect = e-156
 Identities = 276/316 (87%), Positives = 301/316 (95%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            G SYQRFPK+KIRE+KDDY KFELRETDASMANALRRVMIAEVPT+ IDLVEIEVNSSVL
Sbjct: 3    GVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC +D+TLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDL SSDHTVVPVDFSDS+GYDS++ +GIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KDLISSDHTVVPVDFSDSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEP+I INE+LM++LT EEK +WV+SSPTKVFDID ++ QVVV D EAYTYD+E
Sbjct: 183  ATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTYDDE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            V+KKA+AMGK GLV+I AKEDSFIFTVESTGAIKASQL+LNAI+VLKQKLDAVRLS+DTV
Sbjct: 243  VLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 303  EADDQFGELGAHMRGG 318


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Vitis
            vinifera] gi|731383801|ref|XP_010647901.1| PREDICTED:
            DNA-directed RNA polymerases II, IV and V subunit 3
            [Vitis vinifera]
          Length = 318

 Score =  556 bits (1434), Expect = e-155
 Identities = 275/316 (87%), Positives = 301/316 (95%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            G SYQRFPK+KIRE+KDDY KFELRETDASMANALRRVMIAEVPT+ IDLVEIEVNSSVL
Sbjct: 3    GVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTSERAM+MRFSRDCDACDGDGQCEFCSVEFHLRAKC +D+TLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDVTS 122

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDL SSDHTVVPVDFSDS+GYDS++ +GIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 123  KDLISSDHTVVPVDFSDSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 182

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEP+I INE+LM++LT EEK +WV+SSPTKVFDID ++ QVVV D EAYTYD+E
Sbjct: 183  ATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTYDDE 242

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            V+KKA+AMGK GLV+I AKEDSFIFTVESTGAIKASQL+LNAI+VLKQKLDAVRLS+DTV
Sbjct: 243  VLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTV 302

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 303  EADDQFGELGAHMRGG 318


>ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Eucalyptus grandis] gi|629097957|gb|KCW63722.1|
            hypothetical protein EUGRSUZ_G01370 [Eucalyptus grandis]
          Length = 321

 Score =  555 bits (1431), Expect = e-155
 Identities = 278/316 (87%), Positives = 299/316 (94%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            G SYQRFP VK+RE KDDYLKFELR TDAS+ANALRRVMIAEVPTI IDLVEIEVNSSVL
Sbjct: 6    GASYQRFPVVKVRETKDDYLKFELRGTDASVANALRRVMIAEVPTIAIDLVEIEVNSSVL 65

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGLVPLTS+RAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC +DQTLDVTS
Sbjct: 66   NDEFIAHRLGLVPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDVTS 125

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDL SSDHTVVPVDFSD+   DS+E +GI IVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 126  KDLISSDHTVVPVDFSDALADDSAEQKGITIVKLRRGQELRLRAIARKGIGKDHAKWSPA 185

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEP+I INE+L++TL+ EEK++WV+SSPTKVFDIDPNT QV+VVDPEAYTYDEE
Sbjct: 186  ATVTFMYEPEIHINEDLVETLSLEEKQSWVESSPTKVFDIDPNTEQVLVVDPEAYTYDEE 245

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            VIKKA+AMGK GLV+I AKEDSFIFTVESTGAIKASQL+LNAI+VLKQKLDAVRLS+DTV
Sbjct: 246  VIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTV 305

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAHMRGG
Sbjct: 306  EADDQFGELGAHMRGG 321


>gb|AIA09926.1| RNA polymerase II [Quercus suber]
          Length = 317

 Score =  554 bits (1428), Expect = e-155
 Identities = 278/316 (87%), Positives = 298/316 (94%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            G SYQRFPKVKIREMKDD +KFELRETDAS+ANALRRVMIAEVPT+ IDLVEIEVNSSVL
Sbjct: 4    GMSYQRFPKVKIREMKDDMVKFELRETDASVANALRRVMIAEVPTVAIDLVEIEVNSSVL 63

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTS+RAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC +DQTLDVTS
Sbjct: 64   NDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCLTDQTLDVTS 123

Query: 891  KDLYSSDHTVVPVDFSDSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 712
            KDLYSSDHTVVPV+FSD    D+ E RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA
Sbjct: 124  KDLYSSDHTVVPVEFSDPN--DAGEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPA 181

Query: 711  ATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDEE 532
            ATVTFMYEP IRINE+LM+T++ EEKR W++SSPTKVFDIDP T QVVVV+PE YTYD+E
Sbjct: 182  ATVTFMYEPMIRINEDLMETMSLEEKRTWIESSPTKVFDIDPVTQQVVVVEPELYTYDDE 241

Query: 531  VIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDTV 352
            VIKKADAMGK GLV+I AKEDSFIFTVESTGAIKASQL+LNAIE+LKQKLDAVRLSDDTV
Sbjct: 242  VIKKADAMGKSGLVEIEAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSDDTV 301

Query: 351  EADDQFGELGAHMRGG 304
            EADDQFGELGAH+RGG
Sbjct: 302  EADDQFGELGAHLRGG 317


>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Cicer arietinum]
          Length = 319

 Score =  552 bits (1423), Expect = e-154
 Identities = 274/317 (86%), Positives = 300/317 (94%), Gaps = 1/317 (0%)
 Frame = -3

Query: 1251 GKSYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIGIDLVEIEVNSSVL 1072
            G SY R P+VKIRE+KDDY+KFELR+TDAS+ANALRRVMI+EVPTI IDLVEIEVNSSVL
Sbjct: 3    GASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNSSVL 62

Query: 1071 NDEFIAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTS 892
            NDEFIAHRLGL+PLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLR KC +DQTLDVTS
Sbjct: 63   NDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDVTS 122

Query: 891  KDLYSSDHTVVPVDFS-DSAGYDSSENRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSP 715
            KDLYSSDHTVVPVDFS D +  +SS+ RGIIIVKLRRGQELRLRAIARKGIGKDHAKWSP
Sbjct: 123  KDLYSSDHTVVPVDFSADPSSLESSDGRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSP 182

Query: 714  AATVTFMYEPDIRINEELMDTLTFEEKRNWVDSSPTKVFDIDPNTHQVVVVDPEAYTYDE 535
            AATVTFMYEPDI INE+LM++LT EEKR WVDSSPT+VFDIDP T QV+VVDPEAY+YD+
Sbjct: 183  AATVTFMYEPDIHINEDLMESLTLEEKREWVDSSPTRVFDIDPVTQQVMVVDPEAYSYDD 242

Query: 534  EVIKKADAMGKHGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEVLKQKLDAVRLSDDT 355
            EVIKKA+AMGK GLV+ITAK+DSFIFTVESTGA+KASQLLLNAIE+LKQKLDAVRLS+DT
Sbjct: 243  EVIKKAEAMGKPGLVEITAKQDSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRLSEDT 302

Query: 354  VEADDQFGELGAHMRGG 304
            VEADDQFGELGAHMRGG
Sbjct: 303  VEADDQFGELGAHMRGG 319