BLASTX nr result
ID: Ziziphus21_contig00007164
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00007164
(1551 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010100741.1| hypothetical protein L484_005808 [Morus nota... 770 0.0
ref|XP_007214267.1| hypothetical protein PRUPE_ppa025121mg [Prun... 770 0.0
ref|XP_008225340.1| PREDICTED: pentatricopeptide repeat-containi... 768 0.0
ref|XP_008366040.1| PREDICTED: pentatricopeptide repeat-containi... 761 0.0
ref|XP_009352737.1| PREDICTED: pentatricopeptide repeat-containi... 761 0.0
ref|XP_007025334.1| Pentatricopeptide, putative [Theobroma cacao... 749 0.0
ref|XP_010655542.1| PREDICTED: pentatricopeptide repeat-containi... 742 0.0
ref|XP_011657608.1| PREDICTED: pentatricopeptide repeat-containi... 739 0.0
ref|XP_011461307.1| PREDICTED: pentatricopeptide repeat-containi... 739 0.0
ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, part... 734 0.0
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi... 734 0.0
ref|XP_012456795.1| PREDICTED: pentatricopeptide repeat-containi... 733 0.0
ref|XP_008443463.1| PREDICTED: pentatricopeptide repeat-containi... 733 0.0
ref|XP_010999774.1| PREDICTED: pentatricopeptide repeat-containi... 730 0.0
gb|AHB18405.1| pentatricopeptide repeat-containing protein [Goss... 728 0.0
ref|XP_010518818.1| PREDICTED: pentatricopeptide repeat-containi... 716 0.0
gb|KDO77898.1| hypothetical protein CISIN_1g047408mg [Citrus sin... 708 0.0
ref|XP_006414062.1| hypothetical protein EUTSA_v10024377mg [Eutr... 708 0.0
emb|CDX78889.1| BnaA01g09560D [Brassica napus] 706 0.0
ref|XP_009132154.1| PREDICTED: pentatricopeptide repeat-containi... 705 0.0
>ref|XP_010100741.1| hypothetical protein L484_005808 [Morus notabilis]
gi|587895546|gb|EXB84044.1| hypothetical protein
L484_005808 [Morus notabilis]
Length = 877
Score = 770 bits (1989), Expect = 0.0
Identities = 367/442 (83%), Positives = 404/442 (91%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
M+SNLFVCNALMDMY+KC SM+DA+LVF MP KDII+WNTMIGGYSKN LPNEALKLFA
Sbjct: 437 MESNLFVCNALMDMYSKCGSMDDANLVFSRMPAKDIISWNTMIGGYSKNRLPNEALKLFA 496
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
EMQ KSK D +T AC+LPACASLAAL KG+EIHGH+LRNGYF DR+V NALVDMYVKCG+
Sbjct: 497 EMQGKSKADSITAACILPACASLAALAKGREIHGHVLRNGYFQDRHVANALVDMYVKCGL 556
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
L LAQ+LFDMIPVKDLISWTVM+AGYGMHGFG EAI+AFDEMR AGIEPDEVSFISILYA
Sbjct: 557 LALAQVLFDMIPVKDLISWTVMIAGYGMHGFGREAIAAFDEMRHAGIEPDEVSFISILYA 616
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGL DEGW FN+MRNE IEP LEHY+CMVDLLSRTGNLSKAY+FI+ MPI+PDAT
Sbjct: 617 CSHSGL-DEGWSFFNVMRNEYSIEPMLEHYACMVDLLSRTGNLSKAYRFIRKMPIEPDAT 675
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWG+LLCGCR YHDV+LAE+VAE VF+LEP+NTGYYVLLANIYAEAEKWEEV KLR++IG
Sbjct: 676 IWGALLCGCRTYHDVKLAERVAEHVFELEPDNTGYYVLLANIYAEAEKWEEVRKLREKIG 735
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
R+GLKKNPGCSWI IKGKVNIFVAGD S P KIESLLKRLRA+MKEEGF P ++YALI
Sbjct: 736 RRGLKKNPGCSWIEIKGKVNIFVAGDDSQPLAKKIESLLKRLRAKMKEEGFYPNMKYALI 795
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
NAD+MEKEVA+CGHSEKLAMAFG+LS PG+ IRVTKNLRVCGDCHE AKF+SK+S REI
Sbjct: 796 NADEMEKEVALCGHSEKLAMAFGMLSLPPGKTIRVTKNLRVCGDCHETAKFISKMSSREI 855
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
VLRDSNRFHHFKDG+CSCRGFW
Sbjct: 856 VLRDSNRFHHFKDGHCSCRGFW 877
Score = 145 bits (366), Expect = 1e-31
Identities = 80/249 (32%), Positives = 138/249 (55%), Gaps = 2/249 (0%)
Frame = -3
Query: 1546 DSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAE 1367
D + N L+DMY+KC ++ A VF + +++W +MI GY++ NEA++LF E
Sbjct: 337 DGEIMFRNTLLDMYSKCGELDAAVQVFEKTGERSVVSWTSMIAGYAREGRSNEAIRLFYE 396
Query: 1366 MQQKS-KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
M++ PD T+ +L ACA +L G+++H +I +G ++ +V NAL+DMY KCG
Sbjct: 397 MERNGVSPDIFTITSILHACACSGSLEDGKDVHNYIRESGMESNLFVCNALMDMYSKCGS 456
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
+ A L+F +P KD+ISW M+ GY + +EA+ F EM+ + D ++ IL A
Sbjct: 457 MDDANLVFSRMPAKDIISWNTMIGGYSKNRLPNEALKLFAEMQGKS-KADSITAACILPA 515
Query: 1009 CSHSGLVDEGWRLF-NIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDA 833
C+ + +G + +++RN + + + +VD+ + G L+ A +P+K D
Sbjct: 516 CASLAALAKGREIHGHVLRNGYFQDRHVA--NALVDMYVKCGLLALAQVLFDMIPVK-DL 572
Query: 832 TIWGSLLCG 806
W ++ G
Sbjct: 573 ISWTVMIAG 581
Score = 140 bits (353), Expect = 3e-30
Identities = 81/243 (33%), Positives = 131/243 (53%), Gaps = 1/243 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+L+ Y K +E A VF + +D+I+WN+MI GYS N L + + +F +M
Sbjct: 241 VLNSLVAFYFKSGRVESAQKVFDELTDRDVISWNSMISGYSSNGLGEKGVGIFGKMLSLG 300
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
D T+ L ACA++ G+ +H + ++ + + N L+DMY KCG L A
Sbjct: 301 VNVDLATIVNALVACANIGTHLLGRAVHAYAIKACFDGEIMFRNTLLDMYSKCGELDAAV 360
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
+F+ + ++SWT M+AGY G +EAI F EM G+ PD + SIL+AC+ SG
Sbjct: 361 QVFEKTGERSVVSWTSMIAGYAREGRSNEAIRLFYEMERNGVSPDIFTITSILHACACSG 420
Query: 994 LVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
+++G + N +R E +E L + ++D+ S+ G++ A MP K D W ++
Sbjct: 421 SLEDGKDVHNYIR-ESGMESNLFVCNALMDMYSKCGSMDDANLVFSRMPAK-DIISWNTM 478
Query: 814 LCG 806
+ G
Sbjct: 479 IGG 481
Score = 113 bits (282), Expect = 5e-22
Identities = 68/240 (28%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ MY C + +A +F N+ + WN +I Y+K E++ LF +MQ+ + +
Sbjct: 144 LVFMYVNCGDLREARRIFDNIYTDRVFVWNLVINEYAKIRNFRESVSLFKKMQELGIQAN 203
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
T++CVL +L L +G+ IH ++ + G+ V+N+LV Y K G + AQ +FD
Sbjct: 204 SHTLSCVLKCFGALGNLKEGERIHAYLYKLGFGCYNTVLNSLVAFYFKSGRVESAQKVFD 263
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D+ISW M++GY +G G + + F +M G+ D + ++ L AC++ G
Sbjct: 264 ELTDRDVISWNSMISGYSSNGLGEKGVGIFGKMLSLGVNVDLATIVNALVACANIGTHLL 323
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYK-FIKTMPIKPDATIWGSLLCG 806
G + C + ++ + ++D+ S+ G L A + F KT + W S++ G
Sbjct: 324 GRAVHAYAIKAC-FDGEIMFRNTLLDMYSKCGELDAAVQVFEKTG--ERSVVSWTSMIAG 380
Score = 63.9 bits (154), Expect = 4e-07
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Frame = -3
Query: 1429 TMIGGYSKNNLPNEALKLFAEM------------QQKSKPDRVTVACVLPACASLAALGK 1286
T G + NN N + F EM +KS+ + T VL CA +L
Sbjct: 64 TTTRGIADNN--NGEISYFCEMGNLKNAMELLCGSEKSELESRTYCSVLELCAQRKSLRD 121
Query: 1285 GQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFDMIPVKDLISWTVMVAGYGM 1106
G+ +H I +G D Y+ LV MYV CG L A+ +FD I + W +++ Y
Sbjct: 122 GKRVHSVIRDSGVEVDGYLGEKLVFMYVNCGDLREARRIFDNIYTDRVFVWNLVINEYAK 181
Query: 1105 HGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDEGWRL 971
E++S F +M++ GI+ + + +L G + EG R+
Sbjct: 182 IRNFRESVSLFKKMQELGIQANSHTLSCVLKCFGALGNLKEGERI 226
>ref|XP_007214267.1| hypothetical protein PRUPE_ppa025121mg [Prunus persica]
gi|462410132|gb|EMJ15466.1| hypothetical protein
PRUPE_ppa025121mg [Prunus persica]
Length = 796
Score = 770 bits (1988), Expect = 0.0
Identities = 367/442 (83%), Positives = 409/442 (92%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
MDS+LFVCN LMDMYAKC SMEDAH VF +MPVKDI++WNTMIGGYSKN LPNEALKLF+
Sbjct: 355 MDSSLFVCNTLMDMYAKCGSMEDAHSVFSSMPVKDIVSWNTMIGGYSKNCLPNEALKLFS 414
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
EMQQKSKPD +T+A VLPACASLAAL +GQEIHGHILRNGYF+DRYV NALVDMYVKCGV
Sbjct: 415 EMQQKSKPDGMTIASVLPACASLAALNRGQEIHGHILRNGYFSDRYVANALVDMYVKCGV 474
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
LVLA+LLFD+IP+KDLISWTV+VAGYGMHGFGSEAI+AF+EMR +GI+PD +SFISILYA
Sbjct: 475 LVLARLLFDIIPIKDLISWTVIVAGYGMHGFGSEAITAFNEMRKSGIKPDSISFISILYA 534
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGL+DE WR F+ MRN+ I PKLEHY+CMVDLL+RTGNL+KAYKFI MPI+PDAT
Sbjct: 535 CSHSGLLDEAWRFFDSMRNDYSIVPKLEHYACMVDLLARTGNLTKAYKFINKMPIEPDAT 594
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWGSLLCGCRI+HDV+LAEKVAERVF+LEPENTGYYVLLANIYAEAEKWEEV KLR+RIG
Sbjct: 595 IWGSLLCGCRIHHDVKLAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIG 654
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
R+GLKKNPGCSWI IKGKV IFVAG+SSHPQ KIESLLKRLR +MKEEG++PK++YALI
Sbjct: 655 RQGLKKNPGCSWIEIKGKVQIFVAGNSSHPQATKIESLLKRLRLKMKEEGYSPKMQYALI 714
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
NAD+MEKEVA+CGHSEKLA+AFGIL+ PG+ IRVTKNLRVC DCHEMAKF+SK S REI
Sbjct: 715 NADEMEKEVALCGHSEKLAIAFGILNLPPGKTIRVTKNLRVCSDCHEMAKFISKTSRREI 774
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
VLRDSNRFHH KDG CSCRGFW
Sbjct: 775 VLRDSNRFHHMKDGICSCRGFW 796
Score = 151 bits (381), Expect = 2e-33
Identities = 83/250 (33%), Positives = 141/250 (56%), Gaps = 2/250 (0%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
+D ++ N ++DMY+KC + A VF M + +++W +MI GY + L +EA++LF+
Sbjct: 254 LDMDIMFYNNVLDMYSKCGDLSSATQVFGKMGQRSVVSWTSMIAGYVREGLSDEAIELFS 313
Query: 1369 EMQQKS-KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCG 1193
EM++ PD T+ +L ACA +L KG++IH +I +G + +V N L+DMY KCG
Sbjct: 314 EMERNDVSPDVYTITSILHACACNGSLKKGRDIHKYIREHGMDSSLFVCNTLMDMYAKCG 373
Query: 1192 VLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILY 1013
+ A +F +PVKD++SW M+ GY + +EA+ F EM+ +PD ++ S+L
Sbjct: 374 SMEDAHSVFSSMPVKDIVSWNTMIGGYSKNCLPNEALKLFSEMQQKS-KPDGMTIASVLP 432
Query: 1012 ACSHSGLVDEGWRLF-NIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPD 836
AC+ ++ G + +I+RN + + + +VD+ + G L A +PIK D
Sbjct: 433 ACASLAALNRGQEIHGHILRNGYFSDRYVA--NALVDMYVKCGVLVLARLLFDIIPIK-D 489
Query: 835 ATIWGSLLCG 806
W ++ G
Sbjct: 490 LISWTVIVAG 499
Score = 135 bits (339), Expect = 1e-28
Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 1/243 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+LM Y K R +E A VF + +D+I+WN+MI Y N L + +++F +M
Sbjct: 159 VGNSLMAFYFKNRIIESARKVFDELSDRDVISWNSMISAYVANGLAEKGVEIFRQMLSLG 218
Query: 1351 KP-DRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
D TV VL AC+ L G+ +H + ++ D N ++DMY KCG L A
Sbjct: 219 VDVDLATVINVLMACSDGGNLSLGRALHSYAIKTCLDMDIMFYNNVLDMYSKCGDLSSAT 278
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
+F + + ++SWT M+AGY G EAI F EM + PD + SIL+AC+ +G
Sbjct: 279 QVFGKMGQRSVVSWTSMIAGYVREGLSDEAIELFSEMERNDVSPDVYTITSILHACACNG 338
Query: 994 LVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
+ +G + +R E ++ L + ++D+ ++ G++ A+ +MP+K D W ++
Sbjct: 339 SLKKGRDIHKYIR-EHGMDSSLFVCNTLMDMYAKCGSMEDAHSVFSSMPVK-DIVSWNTM 396
Query: 814 LCG 806
+ G
Sbjct: 397 IGG 399
Score = 119 bits (298), Expect = 7e-24
Identities = 67/239 (28%), Positives = 126/239 (52%), Gaps = 1/239 (0%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ M+ KC + +A VF + + WN MI Y+K E + LF +MQ+ + +
Sbjct: 62 LVFMFVKCGDLREARRVFDKLSNGKVFLWNLMINEYAKVRNFREGIHLFRKMQELGIQAN 121
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
T +C+L +SL + +G+ +HG++ + G+ +D V N+L+ Y K ++ A+ +FD
Sbjct: 122 SYTFSCILKCFSSLGYVREGEWVHGYLYKLGFGSDNTVGNSLMAFYFKNRIIESARKVFD 181
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D+ISW M++ Y +G + + F +M G++ D + I++L ACS G +
Sbjct: 182 ELSDRDVISWNSMISAYVANGLAEKGVEIFRQMLSLGVDVDLATVINVLMACSDGGNLSL 241
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLCG 806
G L + C ++ + Y+ ++D+ S+ G+LS A + M + W S++ G
Sbjct: 242 GRALHSYAIKTC-LDMDIMFYNNVLDMYSKCGDLSSATQVFGKMG-QRSVVSWTSMIAG 298
Score = 67.4 bits (163), Expect = 3e-08
Identities = 44/127 (34%), Positives = 62/127 (48%)
Frame = -3
Query: 1360 QKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVL 1181
QKS+ D VL CA L +L G+ +H I NG D + LV M+VKCG L
Sbjct: 15 QKSELDLEGYCSVLELCAGLKSLQDGKRVHSVICNNGAEVDGPLGAKLVFMFVKCGDLRE 74
Query: 1180 AQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSH 1001
A+ +FD + + W +M+ Y E I F +M++ GI+ + +F IL S
Sbjct: 75 ARRVFDKLSNGKVFLWNLMINEYAKVRNFREGIHLFRKMQELGIQANSYTFSCILKCFSS 134
Query: 1000 SGLVDEG 980
G V EG
Sbjct: 135 LGYVREG 141
>ref|XP_008225340.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic [Prunus mume]
Length = 878
Score = 768 bits (1983), Expect = 0.0
Identities = 366/442 (82%), Positives = 407/442 (92%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
MDS LFVCN LMDMYAKC SMEDAH VF NMPVKDI++WNTMIGGYSKN LPNEALKLF+
Sbjct: 437 MDSGLFVCNTLMDMYAKCGSMEDAHSVFSNMPVKDIVSWNTMIGGYSKNCLPNEALKLFS 496
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
EMQQKSKPD +T+A VLPACASLAAL +GQEIHGHILRNGYF+DRYV NALVDMYVKCGV
Sbjct: 497 EMQQKSKPDGMTIASVLPACASLAALNRGQEIHGHILRNGYFSDRYVANALVDMYVKCGV 556
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
LVLA+LLFD+IP+KDLISWTV+VAGYGMHG G EAI+AF+EMR +GI+PD +SFISILYA
Sbjct: 557 LVLARLLFDIIPMKDLISWTVIVAGYGMHGLGREAITAFNEMRKSGIKPDSISFISILYA 616
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGL+DE WR F+ MRN+ I PKLEHY+CMVDLL+RTGNL+KAYKFI MPI+PDAT
Sbjct: 617 CSHSGLLDEAWRFFDSMRNDYSIVPKLEHYACMVDLLARTGNLTKAYKFINKMPIEPDAT 676
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWGSLLCGCRI+HDV+LAEKVAERVF+LEPENTGYYVLLANIYAEAEKWEEV KLR+RIG
Sbjct: 677 IWGSLLCGCRIHHDVKLAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIG 736
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
R+GLKKNPGCSWI IKGKV IFVAG+SSHPQ KIESLLKRLR +MKEEG++PK++YALI
Sbjct: 737 RQGLKKNPGCSWIEIKGKVQIFVAGNSSHPQATKIESLLKRLRLKMKEEGYSPKMQYALI 796
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
NAD+MEKEVA+CGHSEKLA+AFGIL+ PG+ IRVTKNLRVC DCHEMAKF+SK S REI
Sbjct: 797 NADEMEKEVALCGHSEKLAIAFGILNLPPGKTIRVTKNLRVCSDCHEMAKFISKTSRREI 856
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
VLRDSNRFHH KDG+CSCRGFW
Sbjct: 857 VLRDSNRFHHMKDGSCSCRGFW 878
Score = 149 bits (376), Expect = 7e-33
Identities = 82/250 (32%), Positives = 141/250 (56%), Gaps = 2/250 (0%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
+D ++ N ++DMY+KC + A VF M + +++W +MI GY + L +EA++LF+
Sbjct: 336 LDMDIIFYNNVLDMYSKCGDLSSATQVFGKMGQRSVVSWTSMIAGYVREGLSDEAIELFS 395
Query: 1369 EMQQKS-KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCG 1193
EM++ PD T+ +L ACA +L KG++IH +I +G + +V N L+DMY KCG
Sbjct: 396 EMERNGVSPDVYTITSILHACACNGSLKKGRDIHKYIREHGMDSGLFVCNTLMDMYAKCG 455
Query: 1192 VLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILY 1013
+ A +F +PVKD++SW M+ GY + +EA+ F EM+ +PD ++ S+L
Sbjct: 456 SMEDAHSVFSNMPVKDIVSWNTMIGGYSKNCLPNEALKLFSEMQQKS-KPDGMTIASVLP 514
Query: 1012 ACSHSGLVDEGWRLF-NIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPD 836
AC+ ++ G + +I+RN + + + +VD+ + G L A +P+K D
Sbjct: 515 ACASLAALNRGQEIHGHILRNGYFSDRYVA--NALVDMYVKCGVLVLARLLFDIIPMK-D 571
Query: 835 ATIWGSLLCG 806
W ++ G
Sbjct: 572 LISWTVIVAG 581
Score = 136 bits (343), Expect = 4e-29
Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 1/243 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+LM Y K R +E A VF + +D+I+WN+MI Y N L ++ + +F +M
Sbjct: 241 VGNSLMAFYFKNRRIESARKVFDELSDRDVISWNSMISAYVSNGLADKGVDIFRQMLSLG 300
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
D T+ VL AC+ L G+ +H + ++ D N ++DMY KCG L A
Sbjct: 301 IDVDLATIINVLMACSDGGNLSLGRALHSYAIKTCLDMDIIFYNNVLDMYSKCGDLSSAT 360
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
+F + + ++SWT M+AGY G EAI F EM G+ PD + SIL+AC+ +G
Sbjct: 361 QVFGKMGQRSVVSWTSMIAGYVREGLSDEAIELFSEMERNGVSPDVYTITSILHACACNG 420
Query: 994 LVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
+ +G + +R E ++ L + ++D+ ++ G++ A+ MP+K D W ++
Sbjct: 421 SLKKGRDIHKYIR-EHGMDSGLFVCNTLMDMYAKCGSMEDAHSVFSNMPVK-DIVSWNTM 478
Query: 814 LCG 806
+ G
Sbjct: 479 IGG 481
Score = 119 bits (299), Expect = 6e-24
Identities = 69/239 (28%), Positives = 126/239 (52%), Gaps = 1/239 (0%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ M+ KC + +A L+F + I WN MI Y+K E + LF +MQ+ + +
Sbjct: 144 LVFMFVKCGDLREARLIFDKLSNGKIFLWNLMINEYAKVRNFREGIHLFRKMQELDIQAN 203
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
T +C+L +SL + +G+ +HG++ + G+ +D V N+L+ Y K + A+ +FD
Sbjct: 204 SYTFSCILKCFSSLGYVREGEWVHGYLYKLGFGSDNTVGNSLMAFYFKNRRIESARKVFD 263
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D+ISW M++ Y +G + + F +M GI+ D + I++L ACS G +
Sbjct: 264 ELSDRDVISWNSMISAYVSNGLADKGVDIFRQMLSLGIDVDLATIINVLMACSDGGNLSL 323
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLCG 806
G L + C ++ + Y+ ++D+ S+ G+LS A + M + W S++ G
Sbjct: 324 GRALHSYAIKTC-LDMDIIFYNNVLDMYSKCGDLSSATQVFGKMG-QRSVVSWTSMIAG 380
Score = 67.8 bits (164), Expect = 3e-08
Identities = 49/156 (31%), Positives = 73/156 (46%)
Frame = -3
Query: 1447 DIIAWNTMIGGYSKNNLPNEALKLFAEMQQKSKPDRVTVACVLPACASLAALGKGQEIHG 1268
++I N I Y + A++L +KS+ D VL CA L +L G+ +H
Sbjct: 69 EVIDKNAKISKYCEMGNLKNAVELVCG-SKKSELDLEGYCSVLELCAGLKSLQDGKRVHS 127
Query: 1267 HILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSE 1088
I NG D + LV M+VKCG L A+L+FD + + W +M+ Y E
Sbjct: 128 VICSNGAEVDGPLGAKLVFMFVKCGDLREARLIFDKLSNGKIFLWNLMINEYAKVRNFRE 187
Query: 1087 AISAFDEMRDAGIEPDEVSFISILYACSHSGLVDEG 980
I F +M++ I+ + +F IL S G V EG
Sbjct: 188 GIHLFRKMQELDIQANSYTFSCILKCFSSLGYVREG 223
>ref|XP_008366040.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Malus domestica]
Length = 877
Score = 761 bits (1965), Expect = 0.0
Identities = 365/442 (82%), Positives = 401/442 (90%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
MDS+L+VCN LMDMYAKC SMEDAH VF MP KDI++WNTMIGGYSKN LPNEALKLF+
Sbjct: 436 MDSSLYVCNTLMDMYAKCGSMEDAHSVFSRMPAKDIVSWNTMIGGYSKNCLPNEALKLFS 495
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
EM QKSKPD +T+A VLPACASLAAL +GQEIHGHILRNGYF++R+V NALVDMYVKCGV
Sbjct: 496 EMMQKSKPDSMTIASVLPACASLAALNRGQEIHGHILRNGYFSERHVANALVDMYVKCGV 555
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
LVLA+LLFD IPVKDLISWTV+ AGYGMHGFG EAI+AF+EMR AGIEPD VSFISILYA
Sbjct: 556 LVLARLLFDXIPVKDLISWTVIXAGYGMHGFGREAIAAFNEMRKAGIEPDSVSFISILYA 615
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGL DE WR F+ MRN+ I PKLEHY+CMVDLLSRTGNL+KAYKFIKTMPI+PDAT
Sbjct: 616 CSHSGLXDEAWRFFDTMRNDYGIVPKLEHYACMVDLLSRTGNLTKAYKFIKTMPIEPDAT 675
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWGSLLCGCRI+HDV+LAEKVAE VF+LEPENTGYYVLLANIYAEAEKWEEV LR+RI
Sbjct: 676 IWGSLLCGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKMLRERIT 735
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
R+GLKKNPGCSWI IKGKV IFVAGDSSHPQ KIESLLKRLR +MKEEG +PK++YALI
Sbjct: 736 RRGLKKNPGCSWIEIKGKVKIFVAGDSSHPQAAKIESLLKRLRLKMKEEGQSPKMQYALI 795
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
NAD+ EKEVA+CGHSEKLA+AFGIL+ PG+ IRVTKNLRVCGDCHEMAKF+S+ S REI
Sbjct: 796 NADEAEKEVALCGHSEKLAIAFGILNLQPGKTIRVTKNLRVCGDCHEMAKFISRTSRREI 855
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
VLRDSNRFHH KDGNCSCRGFW
Sbjct: 856 VLRDSNRFHHMKDGNCSCRGFW 877
Score = 155 bits (392), Expect = 9e-35
Identities = 84/249 (33%), Positives = 138/249 (55%), Gaps = 2/249 (0%)
Frame = -3
Query: 1546 DSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAE 1367
D ++ CN ++DMY+KC + A VF M + +++W +MI G+ + L +EA+ LF+E
Sbjct: 336 DEDVMFCNNVLDMYSKCGDLSSAIQVFKKMGERSVVSWTSMIAGHIREGLSDEAIGLFSE 395
Query: 1366 MQQKS-KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
M++ PD T+ +L ACAS +L KG++IH +I +G + YV N L+DMY KCG
Sbjct: 396 MERDGVNPDAYTITSILHACASSGSLKKGRDIHNYIKEHGMDSSLYVCNTLMDMYAKCGS 455
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
+ A +F +P KD++SW M+ GY + +EA+ F EM +PD ++ S+L A
Sbjct: 456 MEDAHSVFSRMPAKDIVSWNTMIGGYSKNCLPNEALKLFSEMMQKS-KPDSMTIASVLPA 514
Query: 1009 CSHSGLVDEGWRLF-NIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDA 833
C+ ++ G + +I+RN E + + +VD+ + G L A +P+K D
Sbjct: 515 CASLAALNRGQEIHGHILRNGYFSERHVA--NALVDMYVKCGVLVLARLLFDXIPVK-DL 571
Query: 832 TIWGSLLCG 806
W + G
Sbjct: 572 ISWTVIXAG 580
Score = 137 bits (345), Expect = 3e-29
Identities = 78/243 (32%), Positives = 130/243 (53%), Gaps = 1/243 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+LM Y K R +E A VF + +D+I+WN+MI Y N L + +++F +M
Sbjct: 240 VGNSLMAFYFKNRRIEXARKVFDELCDRDVISWNSMISAYVSNGLAEKGVEIFRQMVSLG 299
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
D T+ VL AC + L G+ +H + ++ + D N ++DMY KCG L A
Sbjct: 300 IDVDLATIINVLMACVAGGNLSLGRALHAYAIKASFDEDVMFCNNVLDMYSKCGDLSSAI 359
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
+F + + ++SWT M+AG+ G EAI F EM G+ PD + SIL+AC+ SG
Sbjct: 360 QVFKKMGERSVVSWTSMIAGHIREGLSDEAIGLFSEMERDGVNPDAYTITSILHACASSG 419
Query: 994 LVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
+ +G + N ++ E ++ L + ++D+ ++ G++ A+ MP K D W ++
Sbjct: 420 SLKKGRDIHNYIK-EHGMDSSLYVCNTLMDMYAKCGSMEDAHSVFSRMPAK-DIVSWNTM 477
Query: 814 LCG 806
+ G
Sbjct: 478 IGG 480
Score = 114 bits (284), Expect = 3e-22
Identities = 68/239 (28%), Positives = 123/239 (51%), Gaps = 1/239 (0%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ MY KC + +A VF + + WN MI Y+K E + LF +MQ+ + +
Sbjct: 143 LVFMYVKCGDLREARRVFDKLSNGKVFVWNLMINEYAKVRNFREGVYLFGKMQELGIQAN 202
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
T +CVL ++L + +G+ IHG++ + G+ +D V N+L+ Y K + A+ +FD
Sbjct: 203 SYTFSCVLKCFSALGCVREGEWIHGYLYKLGFGSDNTVGNSLMAFYFKNRRIEXARKVFD 262
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D+ISW M++ Y +G + + F +M GI+ D + I++L AC G +
Sbjct: 263 ELCDRDVISWNSMISAYVSNGLAEKGVEIFRQMVSLGIDVDLATIINVLMACVAGGNLSL 322
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLCG 806
G R + + + + + ++D+ S+ G+LS A + K M + W S++ G
Sbjct: 323 G-RALHAYAIKASFDEDVMFCNNVLDMYSKCGDLSSAIQVFKKMG-ERSVVSWTSMIAG 379
Score = 67.4 bits (163), Expect = 3e-08
Identities = 52/166 (31%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Frame = -3
Query: 1453 VKDIIAWNTMIGGYSKNNLPNEA-----LKLFAEM---QQKSKPDRVTVACVLPACASLA 1298
V D +A + G KN N+ LK EM QKS+ D V+ CA +
Sbjct: 57 VSDSLAAPAITGVADKNAKINKYCEMGNLKSAMEMVSGAQKSELDLEAYCSVVELCAGMM 116
Query: 1297 ALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFDMIPVKDLISWTVMVA 1118
+L G+ +H I NG D + LV MYVKCG L A+ +FD + + W +M+
Sbjct: 117 SLQDGKXVHSVICDNGVEADGQLGAKLVFMYVKCGDLREARRVFDKLSNGKVFVWNLMIN 176
Query: 1117 GYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDEG 980
Y E + F +M++ GI+ + +F +L S G V EG
Sbjct: 177 EYAKVRNFREGVYLFGKMQELGIQANSYTFSCVLKCFSALGCVREG 222
>ref|XP_009352737.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic [Pyrus x bretschneideri]
Length = 879
Score = 761 bits (1964), Expect = 0.0
Identities = 363/442 (82%), Positives = 402/442 (90%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
MDS+L+VCN LMDMYAKC SMEDAH VF MP KDI++WNTMIGGYSKN LPNEALKLF+
Sbjct: 438 MDSSLYVCNTLMDMYAKCGSMEDAHSVFSRMPAKDIVSWNTMIGGYSKNCLPNEALKLFS 497
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
EM QKSKPD +T+A +LPACASLAAL +GQEIHGHILRNGYF++R+V NALVDMYVKCGV
Sbjct: 498 EMMQKSKPDSMTIASILPACASLAALNRGQEIHGHILRNGYFSERHVANALVDMYVKCGV 557
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
LVLA+LLFDM PVKDLISWTV+VAGYGMHGFG EAI+AF+EMR AG EPD VSF+SILYA
Sbjct: 558 LVLARLLFDMFPVKDLISWTVIVAGYGMHGFGREAIAAFNEMRKAGTEPDGVSFVSILYA 617
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGL DE WR F+ MRN+ I PKLEHY+CMVDLLSRTGNL+KAYKFIKTMPI+PDAT
Sbjct: 618 CSHSGLRDEAWRFFDTMRNDYGIVPKLEHYACMVDLLSRTGNLTKAYKFIKTMPIEPDAT 677
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWGSLLCGCRI+HDV+LAEKVAE VF+LEPENTGYYVLLANIYAEAEKWEEV KLR+RI
Sbjct: 678 IWGSLLCGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIT 737
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
R+GLKKNPGCSWI IKGKV IFVAGDSSHPQ KIESLLKRLR +MKEEG +PK++YALI
Sbjct: 738 RRGLKKNPGCSWIEIKGKVKIFVAGDSSHPQAAKIESLLKRLRLKMKEEGQSPKMQYALI 797
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
NAD+ EKEVA+CGHSEKLA+AFG+L+ PG+ IRVTKNLRVCGDCHEMAKF+S+ S REI
Sbjct: 798 NADEAEKEVALCGHSEKLAIAFGMLNLQPGKTIRVTKNLRVCGDCHEMAKFISRTSRREI 857
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
VLRDSNRFHH KDGNCSCRGFW
Sbjct: 858 VLRDSNRFHHMKDGNCSCRGFW 879
Score = 156 bits (394), Expect = 5e-35
Identities = 85/249 (34%), Positives = 138/249 (55%), Gaps = 2/249 (0%)
Frame = -3
Query: 1546 DSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAE 1367
D ++ CN ++DMY+KC + A VF M + +++W +MI G+ + L +EA+ LF+E
Sbjct: 338 DEDVMFCNNVLDMYSKCGDLSSAIQVFKKMGERSVVSWTSMIAGHIREGLSDEAIGLFSE 397
Query: 1366 MQQKS-KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
M++ PD T+ +L ACAS +L KG++IH +I +G + YV N L+DMY KCG
Sbjct: 398 MERDGVNPDAYTITSILHACASSGSLKKGRDIHNYIKEHGMDSSLYVCNTLMDMYAKCGS 457
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
+ A +F +P KD++SW M+ GY + +EA+ F EM +PD ++ SIL A
Sbjct: 458 MEDAHSVFSRMPAKDIVSWNTMIGGYSKNCLPNEALKLFSEMMQKS-KPDSMTIASILPA 516
Query: 1009 CSHSGLVDEGWRLF-NIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDA 833
C+ ++ G + +I+RN E + + +VD+ + G L A P+K D
Sbjct: 517 CASLAALNRGQEIHGHILRNGYFSERHVA--NALVDMYVKCGVLVLARLLFDMFPVK-DL 573
Query: 832 TIWGSLLCG 806
W ++ G
Sbjct: 574 ISWTVIVAG 582
Score = 136 bits (343), Expect = 4e-29
Identities = 78/243 (32%), Positives = 130/243 (53%), Gaps = 1/243 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+LM Y K R +E A VF + +D+I+WN+MI Y N L + +++F +M
Sbjct: 242 VGNSLMAFYFKNRRIESACKVFDELCDRDVISWNSMISAYVSNGLAEKGVEIFRQMVSLG 301
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
D T+ VL AC + L G+ +H + ++ + D N ++DMY KCG L A
Sbjct: 302 IDVDLATIINVLMACVAGGNLSLGRALHAYAIKASFDEDVMFCNNVLDMYSKCGDLSSAI 361
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
+F + + ++SWT M+AG+ G EAI F EM G+ PD + SIL+AC+ SG
Sbjct: 362 QVFKKMGERSVVSWTSMIAGHIREGLSDEAIGLFSEMERDGVNPDAYTITSILHACASSG 421
Query: 994 LVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
+ +G + N ++ E ++ L + ++D+ ++ G++ A+ MP K D W ++
Sbjct: 422 SLKKGRDIHNYIK-EHGMDSSLYVCNTLMDMYAKCGSMEDAHSVFSRMPAK-DIVSWNTM 479
Query: 814 LCG 806
+ G
Sbjct: 480 IGG 482
Score = 112 bits (279), Expect = 1e-21
Identities = 68/239 (28%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ MY KC + +A VF + + WN MI Y+K E + LF +MQ+ + +
Sbjct: 145 LVFMYVKCGDLREARRVFDKLSNGKVFVWNLMINEYAKVRNFREGVYLFGKMQELGIQAN 204
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
T +CVL ++L + +G+ IHG++ + G+ +D V N+L+ Y K + A +FD
Sbjct: 205 SYTFSCVLKCFSALGCVREGEWIHGYLYKLGFGSDNTVGNSLMAFYFKNRRIESACKVFD 264
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D+ISW M++ Y +G + + F +M GI+ D + I++L AC G +
Sbjct: 265 ELCDRDVISWNSMISAYVSNGLAEKGVEIFRQMVSLGIDVDLATIINVLMACVAGGNLSL 324
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLCG 806
G R + + + + + ++D+ S+ G+LS A + K M + W S++ G
Sbjct: 325 G-RALHAYAIKASFDEDVMFCNNVLDMYSKCGDLSSAIQVFKKMG-ERSVVSWTSMIAG 381
Score = 62.8 bits (151), Expect = 8e-07
Identities = 37/115 (32%), Positives = 58/115 (50%)
Frame = -3
Query: 1324 VLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFDMIPVKD 1145
V+ CA + +L G+++H I NG D + LV MYVKCG L A+ +FD +
Sbjct: 110 VVELCAGMMSLQDGKKVHSVICDNGVEADGQLGAKLVFMYVKCGDLREARRVFDKLSNGK 169
Query: 1144 LISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDEG 980
+ W +M+ Y E + F +M++ GI+ + +F +L S G V EG
Sbjct: 170 VFVWNLMINEYAKVRNFREGVYLFGKMQELGIQANSYTFSCVLKCFSALGCVREG 224
>ref|XP_007025334.1| Pentatricopeptide, putative [Theobroma cacao]
gi|508780700|gb|EOY27956.1| Pentatricopeptide, putative
[Theobroma cacao]
Length = 874
Score = 749 bits (1935), Expect = 0.0
Identities = 354/442 (80%), Positives = 402/442 (90%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
++SNLFVCNALMDMYAKC SMEDA+ +F M VKDII+WNTMIGGYSKN LPNEALK+ A
Sbjct: 433 VESNLFVCNALMDMYAKCGSMEDANSIFSRMAVKDIISWNTMIGGYSKNCLPNEALKMLA 492
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
M ++ KPD T+AC+LPACASLAAL +G+EIHGHILRNGYF+DR+V NALVD+YVKCGV
Sbjct: 493 AMLKELKPDSRTLACILPACASLAALERGKEIHGHILRNGYFSDRHVANALVDLYVKCGV 552
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
L LA+LLFDMI KDL+SWTVM+AGYGMHGF +EAI+ F+EMRDAGIEPDEVSFISILYA
Sbjct: 553 LALARLLFDMISSKDLVSWTVMIAGYGMHGFANEAITTFNEMRDAGIEPDEVSFISILYA 612
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGL++EGWR F IMRN+ IEPKLEHY+CMVDLLSRTGNLSKA+ FI+ MPI PDAT
Sbjct: 613 CSHSGLLEEGWRFFYIMRNDYNIEPKLEHYACMVDLLSRTGNLSKAFHFIERMPIAPDAT 672
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWG++LCGCRIYHDV+LAE+VAERVF+LEPENTGYYVLLANIYAEAEKWEEV ++R+RIG
Sbjct: 673 IWGAVLCGCRIYHDVKLAERVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRVRERIG 732
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
RKGL+KNPGCSWI IKGKVN+FVAGDSSHPQ KIESLLK+LR +MK EG+ PK +YALI
Sbjct: 733 RKGLRKNPGCSWIEIKGKVNLFVAGDSSHPQSKKIESLLKKLRRKMKGEGYFPKTKYALI 792
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
NADDM+KE+A+CGHSEKLAMAFG+LS P + IRVTKNLR+CGDCHEMAKFMSK +GREI
Sbjct: 793 NADDMQKEMALCGHSEKLAMAFGLLSLPPSKTIRVTKNLRICGDCHEMAKFMSKETGREI 852
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
VLRDSNRFHHFKDG CSCRGFW
Sbjct: 853 VLRDSNRFHHFKDGYCSCRGFW 874
Score = 130 bits (328), Expect = 2e-27
Identities = 81/275 (29%), Positives = 145/275 (52%), Gaps = 4/275 (1%)
Frame = -3
Query: 1525 NALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-K 1349
N L+DMY+KC ++ A VF M +++++W +MI GY+++ + A++L +M+++ K
Sbjct: 340 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGQSDGAIRLLQQMEREGVK 399
Query: 1348 PDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLL 1169
D V + VL ACA +L G+++H +I N ++ +V NAL+DMY KCG + A +
Sbjct: 400 LDVVAITSVLHACARSGSLENGKDVHDYIKANNVESNLFVCNALMDMYAKCGSMEDANSI 459
Query: 1168 FDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLV 989
F + VKD+ISW M+ GY + +EA+ M ++PD + IL AC+ +
Sbjct: 460 FSRMAVKDIISWNTMIGGYSKNCLPNEALKMLAAMLKE-LKPDSRTLACILPACASLAAL 518
Query: 988 DEGWRLF-NIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLL 812
+ G + +I+RN + + + +VDL + G L+ A + + M D W ++
Sbjct: 519 ERGKEIHGHILRNGYFSDRHVA--NALVDLYVKCGVLALA-RLLFDMISSKDLVSWTVMI 575
Query: 811 CGCRIYHDVELAEKVAERVFD--LEPENTGYYVLL 713
G ++ A + D +EP+ + +L
Sbjct: 576 AGYGMHGFANEAITTFNEMRDAGIEPDEVSFISIL 610
Score = 127 bits (318), Expect = 4e-26
Identities = 73/243 (30%), Positives = 128/243 (52%), Gaps = 1/243 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+L+ Y K + +E A +F + +D+I+WN+MI GY N L + L++F EM
Sbjct: 237 VVNSLITFYFKGKRVESASELFDELIDRDVISWNSMISGYVSNGLAEKGLEVFKEMLYLG 296
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
D T+ VL CA+ L G+ +H ++ + N L+DMY KCG L A
Sbjct: 297 IDVDLATIVTVLVGCANSGTLSLGKAVHALAIKACFERKLNFNNTLLDMYSKCGDLDGAL 356
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
+F+ + ++++SWT M+AGY G AI +M G++ D V+ S+L+AC+ SG
Sbjct: 357 RVFEKMGERNVVSWTSMIAGYTRDGQSDGAIRLLQQMEREGVKLDVVAITSVLHACARSG 416
Query: 994 LVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
++ G + + ++ +E L + ++D+ ++ G++ A M +K D W ++
Sbjct: 417 SLENGKDVHDYIKAN-NVESNLFVCNALMDMYAKCGSMEDANSIFSRMAVK-DIISWNTM 474
Query: 814 LCG 806
+ G
Sbjct: 475 IGG 477
Score = 123 bits (309), Expect = 4e-25
Identities = 69/239 (28%), Positives = 125/239 (52%), Gaps = 1/239 (0%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ Y C +++ +F M K + WN M+ Y+K E++ LF M +K + D
Sbjct: 140 LVSFYVTCGDLKEGRGIFDEMEKKKVFLWNYMLNEYAKFGDFKESIYLFKMMMKKGIEVD 199
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
T +C+L A+ L +G+ +HG++L+ G+ + VVN+L+ Y K + A LFD
Sbjct: 200 SYTFSCILKCLAASGGLKEGERVHGYLLKLGFGSYNSVVNSLITFYFKGKRVESASELFD 259
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D+ISW M++GY +G + + F EM GI+ D + +++L C++SG +
Sbjct: 260 ELIDRDVISWNSMISGYVSNGLAEKGLEVFKEMLYLGIDVDLATIVTVLVGCANSGTLSL 319
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLCG 806
G + + C E KL + ++D+ S+ G+L A + + M + + W S++ G
Sbjct: 320 GKAVHALAIKAC-FERKLNFNNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAG 376
Score = 72.4 bits (176), Expect = 1e-09
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 7/221 (3%)
Frame = -3
Query: 1402 NLPNEALKLFAEMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVN 1223
NL N A++L + M S+ + T +L CA L +L G+++H I NG D + +
Sbjct: 81 NLHN-AMELLS-MSPNSELESKTYCSILQLCADLKSLKDGKKVHSIINSNGVAVDEVLGS 138
Query: 1222 ALVDMYVKCGVLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEP 1043
LV YV CG L + +FD + K + W M+ Y G E+I F M GIE
Sbjct: 139 KLVSFYVTCGDLKEGRGIFDEMEKKKVFLWNYMLNEYAKFGDFKESIYLFKMMMKKGIEV 198
Query: 1042 DEVSFISILYACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLL-------SRTGN 884
D +F IL + SG + EG R+ + ++ Y+ +V+ L R +
Sbjct: 199 DSYTFSCILKCLAASGGLKEGERVHGYL-----LKLGFGSYNSVVNSLITFYFKGKRVES 253
Query: 883 LSKAYKFIKTMPIKPDATIWGSLLCGCRIYHDVELAEKVAE 761
S+ + + I D W S++ G Y LAEK E
Sbjct: 254 ASELFDEL----IDRDVISWNSMISG---YVSNGLAEKGLE 287
>ref|XP_010655542.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Vitis vinifera]
Length = 876
Score = 742 bits (1916), Expect = 0.0
Identities = 351/442 (79%), Positives = 395/442 (89%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
M S+LFV NALMDMYAKC SM DAH VF M VKDI++WNTMIGGYSKN+LPNEAL LF
Sbjct: 435 MQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFV 494
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
EMQ SKP+ +T+AC+LPACASLAAL +GQEIHGHILRNG+ DR+V NALVDMY+KCG
Sbjct: 495 EMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGA 554
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
L LA+LLFDMIP KDL+SWTVM+AGYGMHG+GSEAI+AF+EMR++GIEPDEVSFISILYA
Sbjct: 555 LGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYA 614
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGL+DEGW FN+MRN C IEPK EHY+C+VDLL+R GNLSKAYKFIK MPI+PDAT
Sbjct: 615 CSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDAT 674
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWG+LLCGCRIYHDV+LAEKVAE VF+LEPENTGYYVLLANIYAEAEKWEEV KLR+RIG
Sbjct: 675 IWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIG 734
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
R+GL+KNPGCSWI IKGKV+IFV GDSSHP KIE LLK+ R RMKEEG PK+RYALI
Sbjct: 735 RRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALI 794
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
ADD EKE+A+CGHSEK+AMAFGILS PG+ +RVTKNLRVCGDCHEMAKFMSK+ R+I
Sbjct: 795 KADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDI 854
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
+LRDSNRFHHFKDG+CSCRG W
Sbjct: 855 ILRDSNRFHHFKDGSCSCRGHW 876
Score = 141 bits (356), Expect = 1e-30
Identities = 83/275 (30%), Positives = 147/275 (53%), Gaps = 4/275 (1%)
Frame = -3
Query: 1525 NALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-K 1349
N L+DMY+K ++ A VF M + +++W +MI GY++ L + +++LF EM+++
Sbjct: 342 NCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGIS 401
Query: 1348 PDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLL 1169
PD T+ +L ACA L G+++H +I N +D +V NAL+DMY KCG + A +
Sbjct: 402 PDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSV 461
Query: 1168 FDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLV 989
F + VKD++SW M+ GY + +EA++ F EM+ +P+ ++ IL AC+ +
Sbjct: 462 FSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ-YNSKPNSITMACILPACASLAAL 520
Query: 988 DEGWRLF-NIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLL 812
+ G + +I+RN ++ + + +VD+ + G L A +P K D W ++
Sbjct: 521 ERGQEIHGHILRNGFSLDRHVA--NALVDMYLKCGALGLARLLFDMIPEK-DLVSWTVMI 577
Query: 811 CGCRI--YHDVELAEKVAERVFDLEPENTGYYVLL 713
G + Y +A R +EP+ + +L
Sbjct: 578 AGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISIL 612
Score = 137 bits (346), Expect = 2e-29
Identities = 75/243 (30%), Positives = 133/243 (54%), Gaps = 1/243 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+L+ Y K R +E A +F + +D+I+WN+MI GY N L + L LF +M
Sbjct: 239 VVNSLIAFYFKIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLG 298
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
D T+ V+ C++ L G+ +HG+ ++ + + + N L+DMY K G L A
Sbjct: 299 INTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAI 358
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
+F+ + + ++SWT M+AGY G ++ F EM GI PD + +IL+AC+ +G
Sbjct: 359 QVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTG 418
Query: 994 LVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
L++ G + N ++ E K++ L + ++D+ ++ G++ A+ M +K D W ++
Sbjct: 419 LLENGKDVHNYIK-ENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK-DIVSWNTM 476
Query: 814 LCG 806
+ G
Sbjct: 477 IGG 479
Score = 122 bits (306), Expect = 9e-25
Identities = 71/269 (26%), Positives = 142/269 (52%), Gaps = 11/269 (4%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ MY C + + +F + + + WN ++ GY+K E+L LF M++ K +
Sbjct: 142 LVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGVKMN 201
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
T +CV+ A+ ++ +G+ +H ++ R G+ + VVN+L+ Y K + A+ LFD
Sbjct: 202 SYTFSCVMKCYAASGSVEEGEGVHAYLSRLGFGSYNTVVNSLIAFYFKIRRVESARKLFD 261
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D+ISW M++GY +G + + F++M GI D + +S++ CS++G++
Sbjct: 262 ELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLL 321
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLCG- 806
G R + + +L +C++D+ S++GNL+ A + +TM + W S++ G
Sbjct: 322 G-RALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTSMIAGY 379
Query: 805 ---------CRIYHDVELAEKVAERVFDL 746
R++H++E E ++ +F +
Sbjct: 380 AREGLSDMSVRLFHEME-KEGISPDIFTI 407
Score = 72.0 bits (175), Expect = 1e-09
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Frame = -3
Query: 1366 MQQKSKPDRV--TVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCG 1193
+ Q KPD T VL CA L ++ G+ IH I N D + + LV MYV CG
Sbjct: 91 INQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCG 150
Query: 1192 VLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILY 1013
L + +FD + + + W +++ GY G E++S F MR+ G++ + +F ++
Sbjct: 151 DLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGVKMNSYTFSCVMK 210
Query: 1012 ACSHSGLVDEG 980
+ SG V+EG
Sbjct: 211 CYAASGSVEEG 221
>ref|XP_011657608.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Cucumis sativus]
gi|700210517|gb|KGN65613.1| hypothetical protein
Csa_1G470290 [Cucumis sativus]
Length = 871
Score = 739 bits (1909), Expect = 0.0
Identities = 345/442 (78%), Positives = 402/442 (90%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
+++N FV NAL DMYAKC SM+DAH VF +M KD+I+WNTMIGGY+KN+LPNEAL LFA
Sbjct: 430 LETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFA 489
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
EMQ++SKPD TVAC+LPACASLAAL KG+EIHG+ LRNGY D+YV NA+VDMYVKCG+
Sbjct: 490 EMQRESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGL 549
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
LVLA+ LFDMIP KDL+SWTVM+AGYGMHG+GSEAI+ F++MR GIEPDEVSFISILYA
Sbjct: 550 LVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYA 609
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGL+DEGW++FNIM+ EC+IEP LEHY+CMVDLL+RTGNL KA+KFIK MPIKPDAT
Sbjct: 610 CSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDAT 669
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWG+LLCGCRI+HDV+LAEKVAER+F+LEPENTGYYVLLANIYAEAEKWEEV KLR++IG
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIG 729
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
++GLKKNPGCSWI IKGK+NIFVAGD S PQ KIE LLKRLR++MKEEG++PK YAL+
Sbjct: 730 QRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALL 789
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
NAD+ EKEVA+CGHSEKLAMAFG+L+ PG+ IRVTKNLRVCGDCHEMAKFMSK + REI
Sbjct: 790 NADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREI 849
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
+LRDS+RFHHFKDG+CSCRG+W
Sbjct: 850 ILRDSSRFHHFKDGSCSCRGYW 871
Score = 134 bits (338), Expect = 2e-28
Identities = 88/282 (31%), Positives = 138/282 (48%), Gaps = 3/282 (1%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
+D + N L+DMY+KC + A VF M K +++W +MI GY + L + A+KLF
Sbjct: 329 LDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFD 388
Query: 1369 EMQQKSK-PDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCG 1193
EM+ + PD V +L ACA L G+ +H +I N T+ +V NAL DMY KCG
Sbjct: 389 EMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCG 448
Query: 1192 VLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILY 1013
+ A +F + KD+ISW M+ GY + +EA++ F EM+ +PD + IL
Sbjct: 449 SMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILP 507
Query: 1012 ACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDA 833
AC+ +D+G + E K + +VD+ + G L A +P K D
Sbjct: 508 ACASLAALDKGREIHGYALRNGYSEDKYV-TNAVVDMYVKCGLLVLARSLFDMIPNK-DL 565
Query: 832 TIWGSLLCGCRI--YHDVELAEKVAERVFDLEPENTGYYVLL 713
W ++ G + Y + R+ +EP+ + +L
Sbjct: 566 VSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISIL 607
Score = 124 bits (310), Expect = 3e-25
Identities = 78/245 (31%), Positives = 128/245 (52%), Gaps = 3/245 (1%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+L+ Y R + A +F + +D+I+WN+MI GY KN L + +++F +M
Sbjct: 233 VVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFG 292
Query: 1351 KP-DRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYV--VNALVDMYVKCGVLVL 1181
D T+ V ACA++ L G+ +H + ++ DR V N L+DMY KCG L
Sbjct: 293 VDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATL-DREVRFNNTLLDMYSKCGDLNS 351
Query: 1180 AQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSH 1001
A +F+ + K ++SWT M+ GY G AI FDEM+ G+ PD + SIL AC+
Sbjct: 352 AIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAI 411
Query: 1000 SGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWG 821
+G + G + + +R E +E + + D+ ++ G++ A+ M K D W
Sbjct: 412 NGNLKSGKIVHDYIR-ENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWN 469
Query: 820 SLLCG 806
+++ G
Sbjct: 470 TMIGG 474
Score = 118 bits (295), Expect = 2e-23
Identities = 67/239 (28%), Positives = 126/239 (52%), Gaps = 1/239 (0%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ MY KC +++ +VF + I WN MI YS + E++ LF +M + KP+
Sbjct: 136 LVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPN 195
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
T + +L A++A + +G+++HG I + G+ + VVN+L+ Y + AQ LFD
Sbjct: 196 SYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFD 255
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D+ISW M++GY +G I F +M G++ D + +++ AC++ G +
Sbjct: 256 ELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLL 315
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLCG 806
G L + ++ ++ + ++D+ S+ G+L+ A + + M K W S++ G
Sbjct: 316 GKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEK-TVVSWTSMITG 373
Score = 68.9 bits (167), Expect = 1e-08
Identities = 41/140 (29%), Positives = 70/140 (50%)
Frame = -3
Query: 1360 QKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVL 1181
Q S D +L CA ++ G+ + I +G D + LV MYVKCG L
Sbjct: 89 QNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKE 148
Query: 1180 AQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSH 1001
+++FD + + W +M++ Y G E+I+ F +M + GI+P+ +F SIL +
Sbjct: 149 GRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAA 208
Query: 1000 SGLVDEGWRLFNIMRNECKI 941
V+EG ++ ++ CK+
Sbjct: 209 VARVEEGRQVHGLI---CKL 225
>ref|XP_011461307.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic isoform X1 [Fragaria vesca subsp. vesca]
Length = 870
Score = 739 bits (1907), Expect = 0.0
Identities = 347/442 (78%), Positives = 404/442 (91%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
MDS+LFVCN+LMDMYAKC SMEDA VF +MP+KDI++WNTMIGGYSKN LPNEAL+LF+
Sbjct: 429 MDSSLFVCNSLMDMYAKCGSMEDADSVFSHMPMKDIVSWNTMIGGYSKNCLPNEALELFS 488
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
+MQ+K KPD +T+A VLPACASLAAL +GQEIHG++LR+GYF D+YV NALVDMYVKCGV
Sbjct: 489 DMQRKFKPDSMTLASVLPACASLAALDRGQEIHGYLLRHGYFLDQYVANALVDMYVKCGV 548
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
L+LA++LF+MIPVKDLIS+TV++AGYGMHGFG EAI+AF+EM A IEPD +SFISILYA
Sbjct: 549 LILARVLFEMIPVKDLISYTVIIAGYGMHGFGKEAIAAFNEMTKAEIEPDSISFISILYA 608
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGLV EGWR F+IMRN+ KIEP LEHY+CMVDLL+RTGNL+KAYKFI MPI+PDAT
Sbjct: 609 CSHSGLVQEGWRFFDIMRNDYKIEPMLEHYACMVDLLARTGNLTKAYKFINMMPIEPDAT 668
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
+WGSLLCGCRI+HDV+LAEKVAE VF+LEPENTGYY+LLANIYAEAEKWEEV KLR+RIG
Sbjct: 669 VWGSLLCGCRIHHDVKLAEKVAEHVFELEPENTGYYILLANIYAEAEKWEEVKKLRERIG 728
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
R+ LKKNPGCSWI IKGKVNIFVAG +SHP KIESL+K+ R+RMKE+G+NPK++YALI
Sbjct: 729 RRSLKKNPGCSWIEIKGKVNIFVAGGTSHPDAMKIESLVKKFRSRMKEDGYNPKMQYALI 788
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
NAD++EKEVA+C HSEKLA+AFGIL++ P + IRVTKNLRVCGDCHEMAKF+S+ S REI
Sbjct: 789 NADEVEKEVALCAHSEKLAIAFGILNTPPRKTIRVTKNLRVCGDCHEMAKFISRTSRREI 848
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
VLRDSNRFHH KDGNCSCRGFW
Sbjct: 849 VLRDSNRFHHMKDGNCSCRGFW 870
Score = 146 bits (369), Expect = 4e-32
Identities = 77/238 (32%), Positives = 135/238 (56%), Gaps = 3/238 (1%)
Frame = -3
Query: 1546 DSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAE 1367
D ++ +CN+++DMY+KC + DA VF M + +++W +MI GY + L ++A++LF E
Sbjct: 329 DVDVALCNSVLDMYSKCGDLSDALRVFEKMGRRSVLSWTSMIAGYVREALSDKAIELFCE 388
Query: 1366 MQQKSK-PDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
M+ PD T+ +L ACA +L KG++IH +I + + +V N+L+DMY KCG
Sbjct: 389 METDGVIPDVYTITSILHACACSGSLEKGKDIHKYIREHDMDSSLFVCNSLMDMYAKCGS 448
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
+ A +F +P+KD++SW M+ GY + +EA+ F +M+ +PD ++ S+L A
Sbjct: 449 MEDADSVFSHMPMKDIVSWNTMIGGYSKNCLPNEALELFSDMQ-RKFKPDSMTLASVLPA 507
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHY--SCMVDLLSRTGNLSKAYKFIKTMPIK 842
C+ +D G + + L+ Y + +VD+ + G L A + +P+K
Sbjct: 508 CASLAALDRGQEIHGYLLRHGYF---LDQYVANALVDMYVKCGVLILARVLFEMIPVK 562
Score = 139 bits (350), Expect = 7e-30
Identities = 80/248 (32%), Positives = 136/248 (54%), Gaps = 1/248 (0%)
Frame = -3
Query: 1546 DSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAE 1367
DSN V N+LM Y K +E A VF + +D+++WN+MI Y N P + +++F E
Sbjct: 230 DSN--VVNSLMAFYFKNGRVESARKVFDALRERDVVSWNSMISAYVSNGAPEKGIEIFRE 287
Query: 1366 MQQKS-KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
M D T+ VL AC+ + G+ +HG+ ++ G+ D + N+++DMY KCG
Sbjct: 288 MVWSGIDVDLATIINVLMACSDCGNVVLGRVVHGYAMKGGFDVDVALCNSVLDMYSKCGD 347
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
L A +F+ + + ++SWT M+AGY +AI F EM G+ PD + SIL+A
Sbjct: 348 LSDALRVFEKMGRRSVLSWTSMIAGYVREALSDKAIELFCEMETDGVIPDVYTITSILHA 407
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
C+ SG +++G + +R E ++ L + ++D+ ++ G++ A MP+K D
Sbjct: 408 CACSGSLEKGKDIHKYIR-EHDMDSSLFVCNSLMDMYAKCGSMEDADSVFSHMPMK-DIV 465
Query: 829 IWGSLLCG 806
W +++ G
Sbjct: 466 SWNTMIGG 473
Score = 109 bits (272), Expect = 8e-21
Identities = 74/267 (27%), Positives = 137/267 (51%), Gaps = 1/267 (0%)
Frame = -3
Query: 1534 FVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQK 1355
+V L+ MY C + +A VF + + + WN MI Y+K E + LF +M +
Sbjct: 131 YVGAKLVFMYVHCGDLREARRVFDALSDRKVFLWNLMINEYAKVRDFREGVCLFGKMVEC 190
Query: 1354 S-KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLA 1178
+ + T +CV A+L + +G+ +HG++ + + +D VVN+L+ Y K G + A
Sbjct: 191 GVELNSYTFSCVFKCFAALGCVREGEWVHGYLYKLRFGSDSNVVNSLMAFYFKNGRVESA 250
Query: 1177 QLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHS 998
+ +FD + +D++SW M++ Y +G + I F EM +GI+ D + I++L ACS
Sbjct: 251 RKVFDALRERDVVSWNSMISAYVSNGAPEKGIEIFREMVWSGIDVDLATIINVLMACSDC 310
Query: 997 GLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGS 818
G V G R+ + + + + + ++D+ S+ G+LS A + + M + W S
Sbjct: 311 GNVVLG-RVVHGYAMKGGFDVDVALCNSVLDMYSKCGDLSDALRVFEKMG-RRSVLSWTS 368
Query: 817 LLCGCRIYHDVELAEKVAERVFDLEPE 737
++ G Y L++K E ++E +
Sbjct: 369 MIAG---YVREALSDKAIELFCEMETD 392
Score = 61.6 bits (148), Expect = 2e-06
Identities = 37/127 (29%), Positives = 58/127 (45%)
Frame = -3
Query: 1360 QKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVL 1181
+ S D VL CA +L G+ +H + +G D YV LV MYV CG L
Sbjct: 89 ESSDLDSAAYCSVLELCAGNKSLKDGKRVHSVLCEHGVNVDGYVGAKLVFMYVHCGDLRE 148
Query: 1180 AQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSH 1001
A+ +FD + + + W +M+ Y E + F +M + G+E + +F + +
Sbjct: 149 ARRVFDALSDRKVFLWNLMINEYAKVRDFREGVCLFGKMVECGVELNSYTFSCVFKCFAA 208
Query: 1000 SGLVDEG 980
G V EG
Sbjct: 209 LGCVREG 215
>ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, partial [Populus trichocarpa]
gi|550340410|gb|EEE86244.2| hypothetical protein
POPTR_0004s05810g, partial [Populus trichocarpa]
Length = 778
Score = 734 bits (1896), Expect = 0.0
Identities = 343/442 (77%), Positives = 397/442 (89%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
M SN+FVCNALMDMYAKC SMEDA+ VF MPVKDII+WNTMIGGYSKN+LPNEAL LF
Sbjct: 337 MQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFG 396
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
+M + KPD T+AC+LPACASLA+L +G+E+HGHILRNG+F+D+ V NALVDMYVKCGV
Sbjct: 397 DMVLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGV 456
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
VLA+LLFDMIP KDLI+WTVM+AGYGMHGFG+ AI+ F+EMR AGIEPDEVSFISILYA
Sbjct: 457 PVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYA 516
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGL+DEGWR FN+M++EC ++PKLEHY+C+VDLL+R+G L+ AYKFIK+MPI+PDAT
Sbjct: 517 CSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDAT 576
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWG+LL GCRI+HDV+LAEKVAE VF+LEPENTGYYVLLAN YAEAEKWEEV KLRQ+IG
Sbjct: 577 IWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIG 636
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
R+GLKKNPGCSWI +K KV+IF+AG+SSHPQ KIE LLKRLR++MKEEG+ PK RYALI
Sbjct: 637 RRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALI 696
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
NAD ++KE A+CGHSEKLAMAFGIL+ P + IRV+KNLRVCGDCHEMAKF+SK GREI
Sbjct: 697 NADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFISKTLGREI 756
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
VLRDSNRFHHFKDG C CRGFW
Sbjct: 757 VLRDSNRFHHFKDGVCCCRGFW 778
Score = 147 bits (372), Expect = 2e-32
Identities = 85/243 (34%), Positives = 137/243 (56%), Gaps = 2/243 (0%)
Frame = -3
Query: 1528 CNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS- 1352
CN L+DMYAKC ++ A LVF M V+ ++ W ++I Y++ L +EA++LF EM ++
Sbjct: 243 CNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGV 302
Query: 1351 KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQL 1172
PD T+ VL ACA +L G+++H +I N ++ +V NAL+DMY KCG + A
Sbjct: 303 SPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANS 362
Query: 1171 LFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGL 992
+F +PVKD+ISW M+ GY + +EA+S F +M ++PD + IL AC+
Sbjct: 363 VFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDM-VLEMKPDGTTLACILPACASLAS 421
Query: 991 VDEGWRLF-NIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
+D G + +I+RN + ++ + +VD+ + G A +P K D W +
Sbjct: 422 LDRGKEVHGHILRNGFFSDQQVA--NALVDMYVKCGVPVLARLLFDMIPTK-DLITWTVM 478
Query: 814 LCG 806
+ G
Sbjct: 479 IAG 481
Score = 139 bits (351), Expect = 5e-30
Identities = 79/269 (29%), Positives = 143/269 (53%), Gaps = 2/269 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+L+ Y K R ++ A +F + +D+I+WN+MI GY N + ++LF +M
Sbjct: 141 VVNSLIAFYLKIRRVDVARKLFDELSNRDVISWNSMISGYVANGFSEKGVELFKKMLYLG 200
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
D T+ +L ACA+ + G+ +HG ++ N L+DMY KCGVL A
Sbjct: 201 VDMDLATMVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAI 260
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
L+FD++ V+ +++WT ++A Y G EAI F EM G+ PD + ++L+AC+ +G
Sbjct: 261 LVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNG 320
Query: 994 LVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
++ G + N +R E ++ + + ++D+ ++ G++ A MP+K D W ++
Sbjct: 321 SLENGKDVHNYIR-ENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTM 378
Query: 814 LCG-CRIYHDVELAEKVAERVFDLEPENT 731
+ G + E + V +++P+ T
Sbjct: 379 IGGYSKNSLPNEALSLFGDMVLEMKPDGT 407
Score = 118 bits (296), Expect = 1e-23
Identities = 75/269 (27%), Positives = 139/269 (51%), Gaps = 11/269 (4%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ MY C + + L+F + + + WN M+ GY+K E++ LF +M + +
Sbjct: 44 LVFMYVTCGDLREGRLIFDKIRNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVN 103
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
TV+CVL A+L ++ +G+ +HG +L+ G + VVN+L+ Y+K + +A+ LFD
Sbjct: 104 SHTVSCVLKCFAALGSVKEGKWVHGFLLKLGLGSYNAVVNSLIAFYLKIRRVDVARKLFD 163
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D+ISW M++GY +GF + + F +M G++ D + +SIL AC++ G V
Sbjct: 164 ELSNRDVISWNSMISGYVANGFSEKGVELFKKMLYLGVDMDLATMVSILQACANCGDVSL 223
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLC-- 809
G + C + K + ++D+ ++ G L A M ++ T W SL+
Sbjct: 224 GRAVHGSGVKAC-VHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVT-WTSLIAAY 281
Query: 808 --------GCRIYHDVELAEKVAERVFDL 746
R++H+++ E V+ +F +
Sbjct: 282 AREGLSDEAIRLFHEMD-REGVSPDIFTI 309
Score = 66.6 bits (161), Expect = 6e-08
Identities = 39/119 (32%), Positives = 61/119 (51%)
Frame = -3
Query: 1336 TVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFDMI 1157
T +L A L +L G+++H I +G D + + LV MYV CG L +L+FD I
Sbjct: 5 TCCSILQLSAELKSLQDGKKVHSFICSSGISIDSVLGSKLVFMYVTCGDLREGRLIFDKI 64
Query: 1156 PVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDEG 980
+ + W +M+ GY G E++S F +M D G+E + + +L + G V EG
Sbjct: 65 RNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVNSHTVSCVLKCFAALGSVKEG 123
>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Citrus sinensis]
Length = 872
Score = 734 bits (1894), Expect = 0.0
Identities = 349/442 (78%), Positives = 390/442 (88%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
M S+L+V NALMDMYAKC SM DA VF MPVKDI++WNTMIGGYSKN+ PNEAL LF
Sbjct: 431 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGGYSKNSCPNEALDLFV 490
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
M Q +PD VT+AC+LPACASLAAL +G+EIHG+ILR+G DR V NA+VDMYVKCGV
Sbjct: 491 AMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 550
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
LVLA+ LFDMIP KDLISWT+M+AGYGMHGFG +AI+ F++MR AGIEPDEVSFIS+LYA
Sbjct: 551 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 610
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGLVDEGWR FN+MR EC IEPKLEHY+CMVDLLSRTGNLS+AY+FI+ MP+ PDAT
Sbjct: 611 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 670
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWGSLLCGCRI+H+V+LAEKVAE VF+LEP+NTGYYVLLAN+YAEAEKWEEV KLR++I
Sbjct: 671 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 730
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
R+GLKKNPGCSWI IKGKVNIFVAG SSHP KIESLLKRLR MK EG+ PK RYALI
Sbjct: 731 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 790
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
NAD+MEKEVA+CGHSEKLAMAFGIL+ GQ IRVTKNLRVCGDCHEMAKFMSK + REI
Sbjct: 791 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 850
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
VLRDSNRFHHFKDG CSCRGFW
Sbjct: 851 VLRDSNRFHHFKDGRCSCRGFW 872
Score = 139 bits (351), Expect = 5e-30
Identities = 81/246 (32%), Positives = 134/246 (54%), Gaps = 1/246 (0%)
Frame = -3
Query: 1540 NLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQ 1361
N V N+L+ Y K R ++DAH +F + +D+++WN MI GY N + + L++F EM
Sbjct: 232 NNTVLNSLITYYFKSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 291
Query: 1360 QKS-KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLV 1184
D T+ VL CA+ AL G+ +H L+ + + N L+DMY KCG L
Sbjct: 292 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 351
Query: 1183 LAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACS 1004
A +F+ + + ++SWT M+AGY G AI F M GIEPD + SIL+AC+
Sbjct: 352 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 411
Query: 1003 HSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIW 824
GL++ G + + ++ E ++ L + ++D+ ++ G+++ A MP+K D W
Sbjct: 412 CDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSW 469
Query: 823 GSLLCG 806
+++ G
Sbjct: 470 NTMIGG 475
Score = 137 bits (346), Expect = 2e-29
Identities = 78/242 (32%), Positives = 131/242 (54%), Gaps = 2/242 (0%)
Frame = -3
Query: 1525 NALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-K 1349
N L+DMY+KC ++ A VF M + +++W +MI GY++ + + A++LF M ++ +
Sbjct: 338 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 397
Query: 1348 PDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLL 1169
PD + +L ACA L G+++H +I N + YV NAL+DMY KCG + A+ +
Sbjct: 398 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 457
Query: 1168 FDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLV 989
F+ +PVKD++SW M+ GY + +EA+ F M EPD V+ IL AC+ +
Sbjct: 458 FNQMPVKDIVSWNTMIGGYSKNSCPNEALDLFVAMLQ-NFEPDGVTMACILPACASLAAL 516
Query: 988 DEGWRLFN-IMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLL 812
+ G + I+R+ + + + +VD+ + G L A +P K D W ++
Sbjct: 517 ERGREIHGYILRHGISADRNVA--NAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMI 573
Query: 811 CG 806
G
Sbjct: 574 AG 575
Score = 108 bits (270), Expect = 1e-20
Identities = 62/239 (25%), Positives = 118/239 (49%), Gaps = 1/239 (0%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ M+ C +++ VF + + WN ++ YSK E+L LF +MQ D
Sbjct: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
T +CVL A + + +G+ +HG +L+ G+ + V+N+L+ Y K + A LFD
Sbjct: 198 SYTFSCVLKCLAVVGNVKEGESVHGFMLKLGFGCNNTVLNSLITYYFKSRRVKDAHKLFD 257
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D++SW M++GY +G + + F EM + G D + +++L C++ G +
Sbjct: 258 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 317
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLCG 806
G + C ++ + ++D+ S+ G+L A + + M + W S++ G
Sbjct: 318 GRAVHAFALKAC-FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAG 374
Score = 66.2 bits (160), Expect = 7e-08
Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 9/253 (3%)
Frame = -3
Query: 1435 WNTMIGGYSKNNLPNEALKLFAEMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILR 1256
+N IG + + +A+++ +KSK D T +L CA L +L G+++H I
Sbjct: 66 YNAEIGRFCEVGNLEKAMEVLYS-SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
Query: 1255 NGYFTDRYVVNA-LVDMYVKCGVLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAIS 1079
+G D V+ + LV M+V CG L + +F+ I + W +++ Y G E++
Sbjct: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
Query: 1078 AFDEMRDAGIEPDEVSFISILYACSHSGLVDEGWRLFNIMR------NECKIEPKLEHYS 917
F +M+ GI D +F +L + G V EG + M N + + +Y
Sbjct: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNVKEGESVHGFMLKLGFGCNNTVLNSLITYY- 243
Query: 916 CMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLCGCRIYHDVELAEKVAERVFDLEPE 737
++ + A+K + + D W ++ G +A VAE+ ++ E
Sbjct: 244 ------FKSRRVKDAHKLFDELSDR-DVVSWNCMISG-------YIANGVAEKGLEVFKE 289
Query: 736 --NTGYYVLLANI 704
N G+ V LA +
Sbjct: 290 MLNLGFNVDLATM 302
>ref|XP_012456795.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Gossypium raimondii]
gi|763802760|gb|KJB69698.1| hypothetical protein
B456_011G038100 [Gossypium raimondii]
Length = 875
Score = 733 bits (1893), Expect = 0.0
Identities = 347/443 (78%), Positives = 402/443 (90%), Gaps = 1/443 (0%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
M SNLFVCNALMDMYAKC SME A+ VF M VKDII+WNTM+GGYSKN LPNEALK FA
Sbjct: 433 MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFA 492
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
M ++ KPD T+AC+LPACASL+AL +G+EIHG+ILRNGY +DR+V NALVD+YVKCGV
Sbjct: 493 AMLKELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 552
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
L LA+LLFDMIP KDL+SWTVM+AGYGMHG+G+EAI+ F+EMRDAGIEPDEVSFISILYA
Sbjct: 553 LGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYA 612
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGL+++GWR F IM+N+ IEPKLEHY+CMVDLLSRTGNLSKAYKFI+T+PI PDAT
Sbjct: 613 CSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDAT 672
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWG+LLCGCRIYHD+ELAEKVAERVF+LEPENTGYYVLLANIYAEAEKWEEV ++R++IG
Sbjct: 673 IWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIG 732
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAG-DSSHPQGGKIESLLKRLRARMKEEGFNPKIRYAL 473
+KGL+KNPGCSWI IKG+VN+FV+G +SSHP KIESLLK++R +MKEEG+ PK +YAL
Sbjct: 733 KKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYAL 792
Query: 472 INADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGRE 293
INAD+M+KE+A+CGHSEKLAMAFG+L+ P + IRVTKNLRVCGDCHEMAKFMSK + RE
Sbjct: 793 INADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRRE 852
Query: 292 IVLRDSNRFHHFKDGNCSCRGFW 224
IVLRDSNRFHHFKDG CSCRGFW
Sbjct: 853 IVLRDSNRFHHFKDGYCSCRGFW 875
Score = 135 bits (339), Expect = 1e-28
Identities = 84/275 (30%), Positives = 144/275 (52%), Gaps = 4/275 (1%)
Frame = -3
Query: 1525 NALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-K 1349
N L+DMY+KC ++ A VF M +++++W +MI GY+++ + A+ L +M+++ K
Sbjct: 340 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVK 399
Query: 1348 PDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLL 1169
D V + +L ACA +L G+++H +I N ++ +V NAL+DMY KCG + A +
Sbjct: 400 LDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSV 459
Query: 1168 FDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLV 989
F + VKD+ISW MV GY + +EA+ F M ++PD + IL AC+ +
Sbjct: 460 FSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKE-LKPDSRTMACILPACASLSAL 518
Query: 988 DEGWRLFN-IMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLL 812
+ G + I+RN + + + +VDL + G L A +P K D W ++
Sbjct: 519 ERGKEIHGYILRNGYSSDRHVA--NALVDLYVKCGVLGLARLLFDMIPSK-DLVSWTVMI 575
Query: 811 CGCRI--YHDVELAEKVAERVFDLEPENTGYYVLL 713
G + Y + +A R +EP+ + +L
Sbjct: 576 AGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 610
Score = 125 bits (314), Expect = 1e-25
Identities = 73/243 (30%), Positives = 126/243 (51%), Gaps = 1/243 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+L+ Y K + E A +F + +D+I+WN+MI GY N L L ++ +M
Sbjct: 237 VVNSLIAFYFKGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 296
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
D T+ VL CA L G+ +H +++ + N L+DMY KCG L A
Sbjct: 297 IDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 356
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
+F+ + ++++SWT M+AGY G+ AI +M G++ D V+ SIL+AC+ SG
Sbjct: 357 RVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSG 416
Query: 994 LVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
+D G + + ++ + L + ++D+ ++ G++ A TM +K D W ++
Sbjct: 417 SLDNGKDVHDYIKAN-NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTM 474
Query: 814 LCG 806
+ G
Sbjct: 475 VGG 477
Score = 118 bits (295), Expect = 2e-23
Identities = 69/239 (28%), Positives = 127/239 (53%), Gaps = 1/239 (0%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ YA C +++ VF M K++ WN M+ Y+K E++ LF M +K + +
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVN 199
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
T +CVL A+L +L +G+ +HG++L+ G+ + VVN+L+ Y K A LFD
Sbjct: 200 SYTFSCVLKCFAALGSLKEGECVHGYLLKLGFGSCNSVVNSLIAFYFKGKRSESASELFD 259
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D+ISW M++GY +G + + +M GI+ D + IS+L C+ SG +
Sbjct: 260 KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSL 319
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLCG 806
G + + + + E ++ + ++D+ S+ G+L A + + M + + W S++ G
Sbjct: 320 G-KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAG 376
Score = 65.5 bits (158), Expect = 1e-07
Identities = 41/129 (31%), Positives = 62/129 (48%)
Frame = -3
Query: 1366 MQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVL 1187
M +KS+ + T VL CA L +L G+++H I N D + LV Y CG L
Sbjct: 91 MCEKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDL 150
Query: 1186 VLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYAC 1007
+ +FD + K++ W MV+ Y G E+I F M + GIE + +F +L
Sbjct: 151 KEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVNSYTFSCVLKCF 210
Query: 1006 SHSGLVDEG 980
+ G + EG
Sbjct: 211 AALGSLKEG 219
>ref|XP_008443463.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic [Cucumis melo]
Length = 871
Score = 733 bits (1893), Expect = 0.0
Identities = 345/442 (78%), Positives = 399/442 (90%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
+++N FV NAL DMYAKC SM+DAH VF +M KD+I+WNTMIGGYSKN LPNEAL LFA
Sbjct: 430 LETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYSKNRLPNEALTLFA 489
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
EMQ +SKPD TVAC+LPACASLAAL +G+EIHG+ LRNGY D+YVVNAL+DMYVKCG+
Sbjct: 490 EMQSESKPDGTTVACILPACASLAALDRGREIHGYALRNGYSEDKYVVNALLDMYVKCGL 549
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
LVLA+ FDMI KDL+SWTVM+AGYGMHGFGSEAI+ F++MR GI+PDEVSFISILYA
Sbjct: 550 LVLARSFFDMILNKDLVSWTVMIAGYGMHGFGSEAINTFNQMRMTGIKPDEVSFISILYA 609
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGL+DEGW++F+IM+ EC+IEP LEHY+CMVDLL+RTGNL KA+KFI+TMPIKPDAT
Sbjct: 610 CSHSGLLDEGWKIFSIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIQTMPIKPDAT 669
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWG+LLCGCRI+HDV+LAEKVAER+F+LEPENTGYYVLLANIYAEAEKWEEV KLR+RIG
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKRIG 729
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
++GLKKNPGC+WI IKGKVNIFVAGD S PQ KIE LLKRLR++MKEEG++PK YAL+
Sbjct: 730 QRGLKKNPGCNWIEIKGKVNIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTTYALL 789
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
NAD+ EKEVA+CGHSEKLAMAFG+L+ PG+ IRVTKNLRVCGDCHEMAKFMSK REI
Sbjct: 790 NADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSVSREI 849
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
+LRDS+RFHHFKDG+CSCRGFW
Sbjct: 850 ILRDSSRFHHFKDGSCSCRGFW 871
Score = 135 bits (341), Expect = 8e-29
Identities = 83/249 (33%), Positives = 125/249 (50%), Gaps = 1/249 (0%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
+D + N L+DMY+KC + A VF M K +++W +MI GY + L + A+KLF
Sbjct: 329 LDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFD 388
Query: 1369 EMQQKSK-PDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCG 1193
EM+ + PD V +L ACA L GQ +H +I N T+ +V NAL DMY KCG
Sbjct: 389 EMKSRGVVPDVYAVTSILHACAINGNLKSGQIVHDYIRENNLETNSFVSNALTDMYAKCG 448
Query: 1192 VLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILY 1013
+ A +F + KD+ISW M+ GY + +EA++ F EM+ +PD + IL
Sbjct: 449 SMKDAHDVFSHMKKKDVISWNTMIGGYSKNRLPNEALTLFAEMQSES-KPDGTTVACILP 507
Query: 1012 ACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDA 833
AC+ +D G + E K + ++D+ + G L A F M + D
Sbjct: 508 ACASLAALDRGREIHGYALRNGYSEDKYV-VNALLDMYVKCGLLVLARSFF-DMILNKDL 565
Query: 832 TIWGSLLCG 806
W ++ G
Sbjct: 566 VSWTVMIAG 574
Score = 126 bits (316), Expect = 6e-26
Identities = 79/245 (32%), Positives = 130/245 (53%), Gaps = 3/245 (1%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+L+ Y R + A +F + +D+I+WN+MI GY KN L + +++F +M
Sbjct: 233 VVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFG 292
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYV--VNALVDMYVKCGVLVL 1181
+ D T+ VL ACA+ L G+ +H + ++ DR V N L+DMY KCG L
Sbjct: 293 VEIDLATMVNVLVACANTGTLLFGKVLHSYSIKAAAL-DREVRFNNTLLDMYSKCGDLNS 351
Query: 1180 AQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSH 1001
A +F+ + K ++SWT M+ GY G AI FDEM+ G+ PD + SIL+AC+
Sbjct: 352 AIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILHACAI 411
Query: 1000 SGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWG 821
+G + G + + +R E +E + + D+ ++ G++ A+ M K D W
Sbjct: 412 NGNLKSGQIVHDYIR-ENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWN 469
Query: 820 SLLCG 806
+++ G
Sbjct: 470 TMIGG 474
Score = 123 bits (309), Expect = 4e-25
Identities = 69/239 (28%), Positives = 128/239 (53%), Gaps = 1/239 (0%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ MY KC +++ ++F + + WN MI Y N E++ LF +M + KP+
Sbjct: 136 LVFMYVKCGDLKEGRMIFDKLSESKVFIWNLMISEYLGNGNYGESINLFKQMLELGIKPN 195
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
T + VL A++A++ +G+++HG I + GY + VVN+L+ Y + AQ LFD
Sbjct: 196 SYTFSSVLKCFAAVASVEEGRQVHGLIYKLGYNSYNTVVNSLISFYFVGRKVRCAQKLFD 255
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D+ISW M++GY +G I F +M G+E D + +++L AC+++G +
Sbjct: 256 ELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVEIDLATMVNVLVACANTGTLLF 315
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLCG 806
G L + ++ ++ + ++D+ S+ G+L+ A + + M K W S++ G
Sbjct: 316 GKVLHSYSIKAAALDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEK-TVVSWTSMITG 373
Score = 70.1 bits (170), Expect = 5e-09
Identities = 39/134 (29%), Positives = 69/134 (51%)
Frame = -3
Query: 1360 QKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVL 1181
Q S D +L CA ++ G+ +H I +G D + LV MYVKCG L
Sbjct: 89 QNSNFDLDAFCSILQLCAERKSIRDGRRVHSIIESSGVIIDGILGVKLVFMYVKCGDLKE 148
Query: 1180 AQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSH 1001
+++FD + + W +M++ Y +G E+I+ F +M + GI+P+ +F S+L +
Sbjct: 149 GRMIFDKLSESKVFIWNLMISEYLGNGNYGESINLFKQMLELGIKPNSYTFSSVLKCFAA 208
Query: 1000 SGLVDEGWRLFNIM 959
V+EG ++ ++
Sbjct: 209 VASVEEGRQVHGLI 222
>ref|XP_010999774.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Populus euphratica]
Length = 879
Score = 730 bits (1884), Expect = 0.0
Identities = 341/442 (77%), Positives = 397/442 (89%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
M SN+FVCNALMDMYAKC SMEDA+ VF +PVKDII+WNTMIGGYSKN+LPNEAL LF
Sbjct: 438 MQSNIFVCNALMDMYAKCGSMEDANSVFLEIPVKDIISWNTMIGGYSKNSLPNEALSLFG 497
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
M + KPD T+AC+LPACASLA+L KG+E+HGHILRNG+F+D+ V NALVDMYVKCGV
Sbjct: 498 AMVLEMKPDGTTLACILPACASLASLDKGKEVHGHILRNGFFSDQQVANALVDMYVKCGV 557
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
VLA+LLFDMIP KDLI+WTVM+AGYGMHGFG+ AI+ F+EMR AGIEPDEVSFISILYA
Sbjct: 558 PVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRLAGIEPDEVSFISILYA 617
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGL++EGWR FN+M++EC I+PKLEHY+C+VDLL+R+G L+ AYKFIK+MPI+PDAT
Sbjct: 618 CSHSGLLEEGWRFFNVMKDECNIKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDAT 677
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWG+LL GCRI+HDV+LAEKVAE VF+LEPENTGYYVLLAN YAEAEKWEEV KLRQ+IG
Sbjct: 678 IWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIG 737
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
++GLKKNPGCSWI +K K++IF++G+SSHPQ KIE LLKRLR++MKEEG+ PK RYALI
Sbjct: 738 QRGLKKNPGCSWIEVKSKIHIFLSGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALI 797
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
NAD ++KE A+CGHSEKLAMAFGIL+ PG+ IRV+KNLRVCGDCHEMAKF+SK GREI
Sbjct: 798 NADSLQKETALCGHSEKLAMAFGILNLPPGRTIRVSKNLRVCGDCHEMAKFISKTLGREI 857
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
VLRDSNRFHHFKDG C CRGFW
Sbjct: 858 VLRDSNRFHHFKDGVCCCRGFW 879
Score = 145 bits (367), Expect = 7e-32
Identities = 85/243 (34%), Positives = 136/243 (55%), Gaps = 2/243 (0%)
Frame = -3
Query: 1528 CNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS- 1352
CN L+DMYAKC ++ A VF M V+ ++ W ++I Y++ L +EA++LF EM ++
Sbjct: 344 CNTLLDMYAKCGVLDGAIRVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGV 403
Query: 1351 KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQL 1172
PD T+ VL ACA +L G+++H +I N ++ +V NAL+DMY KCG + A
Sbjct: 404 SPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANS 463
Query: 1171 LFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGL 992
+F IPVKD+ISW M+ GY + +EA+S F M ++PD + IL AC+
Sbjct: 464 VFLEIPVKDIISWNTMIGGYSKNSLPNEALSLFGAM-VLEMKPDGTTLACILPACASLAS 522
Query: 991 VDEGWRLF-NIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
+D+G + +I+RN + ++ + +VD+ + G A +P K D W +
Sbjct: 523 LDKGKEVHGHILRNGFFSDQQVA--NALVDMYVKCGVPVLARLLFDMIPTK-DLITWTVM 579
Query: 814 LCG 806
+ G
Sbjct: 580 IAG 582
Score = 137 bits (345), Expect = 3e-29
Identities = 73/243 (30%), Positives = 132/243 (54%), Gaps = 1/243 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+L+ Y K R ++ A +F + +D+I+WN+MI GY N + ++LF +M
Sbjct: 242 VVNSLIAFYLKMRRVDVARKLFDELTDRDVISWNSMISGYVANGFSEKGVELFKKMLYSG 301
Query: 1351 KP-DRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
D T+ +L ACA+ + G+ +HG ++ N L+DMY KCGVL A
Sbjct: 302 VDMDLATMVSILQACANCGYVSLGRAVHGSAVKACVHGKTTFCNTLLDMYAKCGVLDGAI 361
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
+FD++ V+ +++WT ++A Y G EAI F EM G+ PD + ++L+AC+ +G
Sbjct: 362 RVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNG 421
Query: 994 LVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
++ G + N +R E ++ + + ++D+ ++ G++ A +P+K D W ++
Sbjct: 422 SLENGKDVHNYIR-ENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEIPVK-DIISWNTM 479
Query: 814 LCG 806
+ G
Sbjct: 480 IGG 482
Score = 120 bits (301), Expect = 3e-24
Identities = 73/269 (27%), Positives = 140/269 (52%), Gaps = 11/269 (4%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ MY C + + +F + + + WN M+ GY+K E++ LF +M + +
Sbjct: 145 LVFMYVTCGDLREGRPIFDKIRNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVN 204
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
TV+C+L A+L ++ +G+ +HG +L+ G + VVN+L+ Y+K + +A+ LFD
Sbjct: 205 SHTVSCILKCFAALGSVKEGKWVHGFLLKLGLGSCNAVVNSLIAFYLKMRRVDVARKLFD 264
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D+ISW M++GY +GF + + F +M +G++ D + +SIL AC++ G V
Sbjct: 265 ELTDRDVISWNSMISGYVANGFSEKGVELFKKMLYSGVDMDLATMVSILQACANCGYVSL 324
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLC-- 809
G + C + K + ++D+ ++ G L A + M ++ T W SL+
Sbjct: 325 GRAVHGSAVKAC-VHGKTTFCNTLLDMYAKCGVLDGAIRVFDLMSVRTVVT-WTSLIAAY 382
Query: 808 --------GCRIYHDVELAEKVAERVFDL 746
R++H+++ E V+ +F +
Sbjct: 383 AREGLSDEAIRLFHEMD-REGVSPDIFTI 410
Score = 68.6 bits (166), Expect = 1e-08
Identities = 47/155 (30%), Positives = 76/155 (49%)
Frame = -3
Query: 1444 IIAWNTMIGGYSKNNLPNEALKLFAEMQQKSKPDRVTVACVLPACASLAALGKGQEIHGH 1265
I WN I + ++A++L M K++ + T +L A L +L G+++H
Sbjct: 71 ITDWNKKIYEVCEMGNIDKAIELLY-MSPKAEIESRTCCSILQLSAELKSLQDGKKVHSF 129
Query: 1264 ILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEA 1085
I +G D + + LV MYV CG L + +FD I + + W +M+ GY G E+
Sbjct: 130 ICSSGISIDSVLGSKLVFMYVTCGDLREGRPIFDKIRNEKVFLWNLMMNGYTKIGDFKES 189
Query: 1084 ISAFDEMRDAGIEPDEVSFISILYACSHSGLVDEG 980
+S F +M D G+E + + IL + G V EG
Sbjct: 190 VSLFRQMLDLGVEVNSHTVSCILKCFAALGSVKEG 224
>gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 875
Score = 728 bits (1879), Expect = 0.0
Identities = 346/443 (78%), Positives = 401/443 (90%), Gaps = 1/443 (0%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
M SNLFVCNALMDMYAKC SME A+ VF M VKDII+WNTM+GGYSKN LPNEALK FA
Sbjct: 433 MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFA 492
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
M ++ KPD T+AC+LPACASL+AL +G+EIHG+ILRNGY +DR+V NALVD+YVKCGV
Sbjct: 493 AMLKELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 552
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
L LA+LLFDMIP KDL+SWTVM+AGYGMHG+G+EAI+ F+EMRDAGIEPDEVSFISILYA
Sbjct: 553 LGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYA 612
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGL+++GWR F IM+N+ IEPKLEHY+CMVDLLSRTGNLSKAYKFI+T+PI PDAT
Sbjct: 613 CSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDAT 672
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWG+LLCGCRIYHD+ELAEKVAERVF+LEPENTGYYVLLANIYAEAEK EEV ++R++IG
Sbjct: 673 IWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIG 732
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAG-DSSHPQGGKIESLLKRLRARMKEEGFNPKIRYAL 473
+KGL+KNPGCSWI IKG+VN+FV+G +SSHP KIESLLK++R +MKEEG+ PK +YAL
Sbjct: 733 KKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYAL 792
Query: 472 INADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGRE 293
INAD+M+KE+A+CGHSEKLAMAFG+L+ P + IRVTKNLRVCGDCHEMAKFMSK + RE
Sbjct: 793 INADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRRE 852
Query: 292 IVLRDSNRFHHFKDGNCSCRGFW 224
IVLRDSNRFHHFKDG CSCRGFW
Sbjct: 853 IVLRDSNRFHHFKDGYCSCRGFW 875
Score = 135 bits (339), Expect = 1e-28
Identities = 84/275 (30%), Positives = 144/275 (52%), Gaps = 4/275 (1%)
Frame = -3
Query: 1525 NALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-K 1349
N L+DMY+KC ++ A VF M +++++W +MI GY+++ + A+ L +M+++ K
Sbjct: 340 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVK 399
Query: 1348 PDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLL 1169
D V + +L ACA +L G+++H +I N ++ +V NAL+DMY KCG + A +
Sbjct: 400 LDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSV 459
Query: 1168 FDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLV 989
F + VKD+ISW MV GY + +EA+ F M ++PD + IL AC+ +
Sbjct: 460 FSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKE-LKPDSRTMACILPACASLSAL 518
Query: 988 DEGWRLFN-IMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLL 812
+ G + I+RN + + + +VDL + G L A +P K D W ++
Sbjct: 519 ERGKEIHGYILRNGYSSDRHVA--NALVDLYVKCGVLGLARLLFDMIPSK-DLVSWTVMI 575
Query: 811 CGCRI--YHDVELAEKVAERVFDLEPENTGYYVLL 713
G + Y + +A R +EP+ + +L
Sbjct: 576 AGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 610
Score = 125 bits (314), Expect = 1e-25
Identities = 73/243 (30%), Positives = 127/243 (52%), Gaps = 1/243 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+L+ Y K + E A +F + +D+I+WN+MI GY N L L ++ +M
Sbjct: 237 VVNSLIAFYFKGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 296
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
D T+ VL CA+ L G+ +H +++ + N L+DMY KCG L A
Sbjct: 297 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 356
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
+F+ + ++++SWT M+AGY G+ AI +M G++ D V+ SIL+AC+ SG
Sbjct: 357 RVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSG 416
Query: 994 LVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
+D G + + ++ + L + ++D+ ++ G++ A TM +K D W ++
Sbjct: 417 SLDNGKDVHDYIKAN-NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTM 474
Query: 814 LCG 806
+ G
Sbjct: 475 VGG 477
Score = 118 bits (296), Expect = 1e-23
Identities = 69/239 (28%), Positives = 128/239 (53%), Gaps = 1/239 (0%)
Frame = -3
Query: 1519 LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS-KPD 1343
L+ YA C +++ VF M K++ WN M+ Y+K E++ LF M +K + +
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVN 199
Query: 1342 RVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQLLFD 1163
T +CVL A+L +L +G+ +HG++L+ G+ + VVN+L+ Y K A LFD
Sbjct: 200 SYTFSCVLKCFAALGSLKEGECVHGYLLKLGFGSCNSVVNSLIAFYFKGKRPESASELFD 259
Query: 1162 MIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSGLVDE 983
+ +D+ISW M++GY +G + + +M GI+ D + IS+L C++SG +
Sbjct: 260 KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSL 319
Query: 982 GWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSLLCG 806
G + + + + E ++ + ++D+ S+ G+L A + + M + + W S++ G
Sbjct: 320 G-KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAG 376
Score = 66.6 bits (161), Expect = 6e-08
Identities = 42/129 (32%), Positives = 62/129 (48%)
Frame = -3
Query: 1366 MQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVL 1187
M QKS+ + T VL CA L +L G+++H I N D + LV Y CG L
Sbjct: 91 MCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDL 150
Query: 1186 VLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYAC 1007
+ +FD + K++ W MV+ Y G E+I F M + GIE + +F +L
Sbjct: 151 KEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVNSYTFSCVLKCF 210
Query: 1006 SHSGLVDEG 980
+ G + EG
Sbjct: 211 AALGSLKEG 219
>ref|XP_010518818.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Tarenaya hassleriana]
Length = 872
Score = 716 bits (1849), Expect = 0.0
Identities = 338/444 (76%), Positives = 394/444 (88%), Gaps = 2/444 (0%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
MD +LFV NALMDMYAKC SME+A LVF MPVKDI++WNT+IGGYSKN NEAL LF+
Sbjct: 429 MDFDLFVSNALMDMYAKCGSMEEARLVFSEMPVKDIVSWNTVIGGYSKNCFANEALSLFS 488
Query: 1369 EMQQK--SKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKC 1196
M ++ S+PD T+ CVLPACAS+AA KG+EIH +I+RN YF+DR+V N+LVDMY KC
Sbjct: 489 AMLEECQSRPDERTMVCVLPACASVAAFDKGREIHSYIMRNRYFSDRHVANSLVDMYAKC 548
Query: 1195 GVLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISIL 1016
G L A+LLFD I KDL+SWTVM+AGYGMHGFG+EAI F+EMR AGIEPDE+SF+S+L
Sbjct: 549 GALKFARLLFDDIVSKDLVSWTVMIAGYGMHGFGNEAIDMFNEMRKAGIEPDEISFVSVL 608
Query: 1015 YACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPD 836
YACSHSGL+DEGWR FNIMR+ECKIEP LEHY+CMVDLL+RTGNLSKAY+FI+ MPI PD
Sbjct: 609 YACSHSGLLDEGWRFFNIMRHECKIEPTLEHYACMVDLLARTGNLSKAYRFIEKMPIPPD 668
Query: 835 ATIWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQR 656
+TIWG+LLCGCRI+HDV+LAEKVAE+VF+LEPENTGYYVL+ANIYAEAEKWEEV +LRQR
Sbjct: 669 STIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRQR 728
Query: 655 IGRKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYA 476
IG++GL+KNPGCSWI IKGKVNIFV+GDSSHPQ KIE+LL+RLRARM EEG++P +YA
Sbjct: 729 IGQRGLRKNPGCSWIEIKGKVNIFVSGDSSHPQTEKIEALLRRLRARMMEEGYSPLTKYA 788
Query: 475 LINADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGR 296
LI+A++MEKE A+CGHSEKLAMA GILSS G++IRVTKNLRVCGDCHEMAKFMSKI+ R
Sbjct: 789 LIDAEEMEKEAALCGHSEKLAMALGILSSGHGKIIRVTKNLRVCGDCHEMAKFMSKITRR 848
Query: 295 EIVLRDSNRFHHFKDGNCSCRGFW 224
EIVLRD NRFHHF DG+CSCRGFW
Sbjct: 849 EIVLRDLNRFHHFTDGHCSCRGFW 872
Score = 151 bits (381), Expect = 2e-33
Identities = 85/244 (34%), Positives = 135/244 (55%), Gaps = 3/244 (1%)
Frame = -3
Query: 1528 CNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS- 1352
CN L+DMY+KC + A VF M + +++ +MI GY++ L EA+KLF+EM+++
Sbjct: 335 CNTLLDMYSKCGDLGSAKAVFEQMSDRSAVSYTSMIAGYAREGLAGEAVKLFSEMEKEGI 394
Query: 1351 KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQL 1172
PD TV VL CA L +G ++H I N D +V NAL+DMY KCG + A+L
Sbjct: 395 SPDVYTVTAVLNCCARNGLLEEGGQVHDWIRENDMDFDLFVSNALMDMYAKCGSMEEARL 454
Query: 1171 LFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEM-RDAGIEPDEVSFISILYACSHSG 995
+F +PVKD++SW ++ GY + F +EA+S F M + PDE + + +L AC+
Sbjct: 455 VFSEMPVKDIVSWNTVIGGYSKNCFANEALSLFSAMLEECQSRPDERTMVCVLPACASVA 514
Query: 994 LVDEGWRLFN-IMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGS 818
D+G + + IMRN + + + +VD+ ++ G L A + + D W
Sbjct: 515 AFDKGREIHSYIMRNRYFSDRHVA--NSLVDMYAKCGALKFARLLFDDI-VSKDLVSWTV 571
Query: 817 LLCG 806
++ G
Sbjct: 572 MIAG 575
Score = 134 bits (338), Expect = 2e-28
Identities = 75/243 (30%), Positives = 127/243 (52%), Gaps = 1/243 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+LM Y K +E A +F M +D+I+WN+MI GY N + L +F +M
Sbjct: 233 VVNSLMASYLKNGRVESARRLFDEMTERDVISWNSMINGYISNGSAEQGLTIFVQMLLSG 292
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
D T+ V CA + G+ +H L+ + N L+DMY KCG L A+
Sbjct: 293 LNVDLATMVSVFSGCADCRFISLGRAVHCFGLKTRFACKDRFCNTLLDMYSKCGDLGSAK 352
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
+F+ + + +S+T M+AGY G EA+ F EM GI PD + ++L C+ +G
Sbjct: 353 AVFEQMSDRSAVSYTSMIAGYAREGLAGEAVKLFSEMEKEGISPDVYTVTAVLNCCARNG 412
Query: 994 LVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGSL 815
L++EG ++ + +R E ++ L + ++D+ ++ G++ +A MP+K D W ++
Sbjct: 413 LLEEGGQVHDWIR-ENDMDFDLFVSNALMDMYAKCGSMEEARLVFSEMPVK-DIVSWNTV 470
Query: 814 LCG 806
+ G
Sbjct: 471 IGG 473
Score = 102 bits (253), Expect = 1e-18
Identities = 69/272 (25%), Positives = 136/272 (50%), Gaps = 1/272 (0%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
+D+NL + L+ MY C ++ +A VF ++ + WN +I Y K E++ LF
Sbjct: 128 IDANLG--SKLVLMYVNCGNLREARRVFDLTRIEKTLFWNLLINEYVKTGDFRESIGLFK 185
Query: 1369 EMQQKS-KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCG 1193
+M + D T + + + + L ++ G+++HG++L+ G+ VVN+L+ Y+K G
Sbjct: 186 KMLNSGIETDHYTFSSISKSLSVLGSVNGGEQLHGYVLKTGFGNYNSVVNSLMASYLKNG 245
Query: 1192 VLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILY 1013
+ A+ LFD + +D+ISW M+ GY +G + ++ F +M +G+ D + +S+
Sbjct: 246 RVESARRLFDEMTERDVISWNSMINGYISNGSAEQGLTIFVQMLLSGLNVDLATMVSVFS 305
Query: 1012 ACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDA 833
C+ + G R + + + K + ++D+ S+ G+L A + M + A
Sbjct: 306 GCADCRFISLG-RAVHCFGLKTRFACKDRFCNTLLDMYSKCGDLGSAKAVFEQMSDR-SA 363
Query: 832 TIWGSLLCGCRIYHDVELAEKVAERVFDLEPE 737
+ S++ G Y LA + + ++E E
Sbjct: 364 VSYTSMIAG---YAREGLAGEAVKLFSEMEKE 392
Score = 75.9 bits (185), Expect = 9e-11
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Frame = -3
Query: 1366 MQQKSKP--DRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCG 1193
++ SKP D T+ +L CA +L G+E+ I NG+ D + + LV MYV CG
Sbjct: 85 LRTSSKPEIDPRTLCSMLQLCADSKSLNHGREVDSFIRANGFAIDANLGSKLVLMYVNCG 144
Query: 1192 VLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILY 1013
L A+ +FD+ ++ + W +++ Y G E+I F +M ++GIE D +F SI
Sbjct: 145 NLREARRVFDLTRIEKTLFWNLLINEYVKTGDFRESIGLFKKMLNSGIETDHYTFSSISK 204
Query: 1012 ACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLS----RTGNLSKAYKFIKTMPI 845
+ S G V+ G +L + ++ +Y+ +V+ L + G + A + M
Sbjct: 205 SLSVLGSVNGGEQLHGYV-----LKTGFGNYNSVVNSLMASYLKNGRVESARRLFDEM-T 258
Query: 844 KPDATIWGSLLCG 806
+ D W S++ G
Sbjct: 259 ERDVISWNSMING 271
>gb|KDO77898.1| hypothetical protein CISIN_1g047408mg [Citrus sinensis]
Length = 830
Score = 708 bits (1827), Expect = 0.0
Identities = 341/442 (77%), Positives = 381/442 (86%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
M S+L+V NALMDMYAKC SM DA VF MPVKDI++WNTMIG AL LF
Sbjct: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFV 448
Query: 1369 EMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGV 1190
M Q +PD VT+AC+LPACASLAAL +G+EIHG+ILR+G DR V NA+VDMYVKCGV
Sbjct: 449 AMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
Query: 1189 LVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYA 1010
LVLA+ LFDMIP KDLISWT+M+AGYGMHGFG +AI+ F++MR AGIEPDEVSFIS+LYA
Sbjct: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
Query: 1009 CSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDAT 830
CSHSGLVDEGWR FN+MR EC IEPKLEHY+CMVDLLSRTGNLS+AY+FI+ MP+ PDAT
Sbjct: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
Query: 829 IWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQRIG 650
IWGSLLCGCRI+H+V+LAEKVAE VF+LEP+NTGYYVLLAN+YAEAEKWEEV KLR++I
Sbjct: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
Query: 649 RKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYALI 470
R+GLKKNPGCSWI IKGKVNIFVAG SSHP KIESLLKRLR MK EG+ PK RYALI
Sbjct: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
Query: 469 NADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGREI 290
NAD+MEKEVA+CGHSEKLAMAFGIL+ GQ IRVTKNLRVCGDCHEMAKFMSK + REI
Sbjct: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
Query: 289 VLRDSNRFHHFKDGNCSCRGFW 224
VLRDSNRFHHFKDG CSCRGFW
Sbjct: 809 VLRDSNRFHHFKDGRCSCRGFW 830
Score = 130 bits (327), Expect = 3e-27
Identities = 78/247 (31%), Positives = 131/247 (53%), Gaps = 2/247 (0%)
Frame = -3
Query: 1546 DSNLFVCNA-LMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
DS F C + + R ++DAH +F + +D+++WN MI GY N + + L++F
Sbjct: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
Query: 1369 EMQQKS-KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCG 1193
EM D T+ VL CA+ AL G+ +H L+ + + N L+DMY KCG
Sbjct: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
Query: 1192 VLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILY 1013
L A +F+ + + ++SWT M+AGY G AI F M GIEPD + SIL+
Sbjct: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
Query: 1012 ACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDA 833
AC+ GL++ G + + ++ E ++ L + ++D+ ++ G+++ A MP+K D
Sbjct: 377 ACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DI 434
Query: 832 TIWGSLL 812
W +++
Sbjct: 435 VSWNTMI 441
Score = 65.5 bits (158), Expect = 1e-07
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 7/218 (3%)
Frame = -3
Query: 1435 WNTMIGGYSKNNLPNEALKLFAEMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILR 1256
+N IG + + +A+++ +KSK D T +L CA L +L G+++H I
Sbjct: 66 YNAEIGRFCEVGNLEKAMEVLYS-SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
Query: 1255 NGYFTDRYVVNA-LVDMYVKCGVLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAIS 1079
+G D V+ + LV M+V CG L + +F+ I + W +++ Y G E++
Sbjct: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
Query: 1078 AFDEMRDAGIEPDEVSF---ISILYACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMV 908
F +M+ GI D +F + L +S V + +LF+ + + + ++CM+
Sbjct: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMI 239
Query: 907 DLLSRTGNLSKAYKFIKTM---PIKPDATIWGSLLCGC 803
G K + K M D ++L GC
Sbjct: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
>ref|XP_006414062.1| hypothetical protein EUTSA_v10024377mg [Eutrema salsugineum]
gi|557115232|gb|ESQ55515.1| hypothetical protein
EUTSA_v10024377mg [Eutrema salsugineum]
Length = 872
Score = 708 bits (1827), Expect = 0.0
Identities = 330/444 (74%), Positives = 396/444 (89%), Gaps = 2/444 (0%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
M ++F+ NALMDMYAKC SM++A LVF MPVKDII+WNT+IGGYSKN NEAL LF
Sbjct: 429 MGFDIFLSNALMDMYAKCGSMQEAELVFSEMPVKDIISWNTIIGGYSKNCYANEALSLFN 488
Query: 1369 EMQQKSK--PDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKC 1196
+ ++ + D TVACVLPACASL+A KG+EIHG+I+RNGYF+DR+V N+LVDMY KC
Sbjct: 489 LLLEEKQLNADERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 548
Query: 1195 GVLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISIL 1016
G L+LA+LLFD + KDL+SWTVM+AGYGMHG G+E+I+ F+ MR+AGIEPDE+SF+S+L
Sbjct: 549 GALLLARLLFDEVASKDLVSWTVMIAGYGMHGIGAESIALFNRMREAGIEPDEISFVSVL 608
Query: 1015 YACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPD 836
YACSHSGLVDEGWR FNIMR+ECKIEP LEHY+C+VD+L+RTGNLSKAY+FI+ MPI PD
Sbjct: 609 YACSHSGLVDEGWRFFNIMRHECKIEPTLEHYACIVDMLARTGNLSKAYRFIENMPIPPD 668
Query: 835 ATIWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQR 656
ATIWG+LLCGCRI+HDV+LAEKVAE+VF LEP+NTGYYVL+ANIYAEAEKWEEV +LR+R
Sbjct: 669 ATIWGALLCGCRIHHDVKLAEKVAEKVFALEPDNTGYYVLMANIYAEAEKWEEVKRLRKR 728
Query: 655 IGRKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYA 476
IGR+GL+KNPGCSWI IKGKVNIFVAGDSSHP+ KIE+ L+R+RARM+EEG++P+ +YA
Sbjct: 729 IGRRGLRKNPGCSWIEIKGKVNIFVAGDSSHPETEKIEAFLRRVRARMREEGYSPQTKYA 788
Query: 475 LINADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGR 296
LI+A++MEKE A+CGHSEKLAMA GILSS G++IRVTKNLRVCGDCHEMAK MSK++ R
Sbjct: 789 LIDAEEMEKEEALCGHSEKLAMALGILSSGHGKIIRVTKNLRVCGDCHEMAKLMSKLTRR 848
Query: 295 EIVLRDSNRFHHFKDGNCSCRGFW 224
EIVLRDSNRFHHFKDG+CSCRGFW
Sbjct: 849 EIVLRDSNRFHHFKDGHCSCRGFW 872
Score = 145 bits (367), Expect = 7e-32
Identities = 84/244 (34%), Positives = 135/244 (55%), Gaps = 3/244 (1%)
Frame = -3
Query: 1528 CNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS- 1352
CN L+DMYAKC ++ + VF M + ++++ +MI GY++ L EA+KLF EM++K
Sbjct: 335 CNTLLDMYAKCGDLDSSIAVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFTEMEEKGI 394
Query: 1351 KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQL 1172
PD TV VL CA L +G+ +H I N D ++ NAL+DMY KCG + A+L
Sbjct: 395 SPDVYTVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSNALMDMYAKCGSMQEAEL 454
Query: 1171 LFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFD-EMRDAGIEPDEVSFISILYACSHSG 995
+F +PVKD+ISW ++ GY + + +EA+S F+ + + + DE + +L AC+
Sbjct: 455 VFSEMPVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKQLNADERTVACVLPACASLS 514
Query: 994 LVDEGWRLFN-IMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGS 818
D+G + IMRN + + + +VD+ ++ G L A + K D W
Sbjct: 515 AFDKGREIHGYIMRNGYFSDRHVA--NSLVDMYAKCGALLLARLLFDEVASK-DLVSWTV 571
Query: 817 LLCG 806
++ G
Sbjct: 572 MIAG 575
Score = 135 bits (339), Expect = 1e-28
Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 2/244 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+L+ Y K + +E A VF M +D+I+WN+MI GY N L + L LF +M
Sbjct: 233 VANSLVAFYLKNQRVESARKVFDEMTERDVISWNSMINGYVSNGLAEQGLSLFVQMLSSG 292
Query: 1351 KP-DRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
D T+ V +CA L G+ +H L+ N L+DMY KCG L +
Sbjct: 293 MDIDLATIVSVFASCADSRLLSLGRAVHSLGLKACLGRQERFCNTLLDMYAKCGDLDSSI 352
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
+F + + ++S+T M+AGY G EA+ F EM + GI PD + ++L C+ +
Sbjct: 353 AVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFTEMEEKGISPDVYTVTAVLNCCARNR 412
Query: 994 LVDEGWRLFN-IMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGS 818
L++EG R+ I N+ + L + ++D+ ++ G++ +A MP+K D W +
Sbjct: 413 LLEEGKRVHEWIKENDMGFDIFLS--NALMDMYAKCGSMQEAELVFSEMPVK-DIISWNT 469
Query: 817 LLCG 806
++ G
Sbjct: 470 IIGG 473
Score = 102 bits (254), Expect = 9e-19
Identities = 60/227 (26%), Positives = 125/227 (55%), Gaps = 1/227 (0%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
+DSNL ALM Y C +++A VF ++ ++ + WN ++ +K+ + ++ LF
Sbjct: 128 IDSNLGSKLALM--YTNCGDLKEAGRVFDHVRIEKALFWNILMNELAKSGDFSGSIGLFK 185
Query: 1369 EMQQKS-KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCG 1193
+M + D T +C+ + +SL ++ G+++HG IL++G+ V N+LV Y+K
Sbjct: 186 KMLSSGVEMDSYTFSCISKSFSSLRSVNGGEQLHGFILKSGFGDCNSVANSLVAFYLKNQ 245
Query: 1192 VLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILY 1013
+ A+ +FD + +D+ISW M+ GY +G + +S F +M +G++ D + +S+
Sbjct: 246 RVESARKVFDEMTERDVISWNSMINGYVSNGLAEQGLSLFVQMLSSGMDIDLATIVSVFA 305
Query: 1012 ACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKA 872
+C+ S L+ G + ++ C + + + ++D+ ++ G+L +
Sbjct: 306 SCADSRLLSLGRAVHSLGLKAC-LGRQERFCNTLLDMYAKCGDLDSS 351
Score = 60.1 bits (144), Expect = 5e-06
Identities = 43/154 (27%), Positives = 72/154 (46%)
Frame = -3
Query: 1432 NTMIGGYSKNNLPNEALKLFAEMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRN 1253
NT + + + A+KL + + K D T+ VL CA +L G+E+ I N
Sbjct: 66 NTRLRRFCEAGNLESAVKLLS-VSGKWDIDPRTLCSVLQLCADSRSLKYGKEVDSFIRGN 124
Query: 1252 GYFTDRYVVNALVDMYVKCGVLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAF 1073
G+ D + + L MY CG L A +FD + ++ + W +++ G S +I F
Sbjct: 125 GFVIDSNLGSKLALMYTNCGDLKEAGRVFDHVRIEKALFWNILMNELAKSGDFSGSIGLF 184
Query: 1072 DEMRDAGIEPDEVSFISILYACSHSGLVDEGWRL 971
+M +G+E D +F I + S V+ G +L
Sbjct: 185 KKMLSSGVEMDSYTFSCISKSFSSLRSVNGGEQL 218
>emb|CDX78889.1| BnaA01g09560D [Brassica napus]
Length = 869
Score = 706 bits (1821), Expect = 0.0
Identities = 327/444 (73%), Positives = 395/444 (88%), Gaps = 2/444 (0%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
M ++F+ NALMDMYAKC SM++A LVF MPV+DII+WNT+IGGYSKN NEAL LF
Sbjct: 426 MGFDIFLSNALMDMYAKCGSMQEAELVFTEMPVRDIISWNTIIGGYSKNCYANEALSLFN 485
Query: 1369 EMQQKSK--PDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKC 1196
+ ++ + PD TV CVLPACASL+A KG+EIHG+I+RNG+F DR+V N+LVDMY KC
Sbjct: 486 LLLEEKRFVPDERTVVCVLPACASLSAFDKGREIHGYIMRNGFFRDRHVANSLVDMYAKC 545
Query: 1195 GVLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISIL 1016
G L+LA+LLFD I KDL+SWTVM+AGYGMHGFG EAI+ FD+ R GIEPDE+SF+S+L
Sbjct: 546 GALLLARLLFDEIASKDLVSWTVMIAGYGMHGFGKEAIALFDQKRREGIEPDEISFVSVL 605
Query: 1015 YACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPD 836
YACSHSGLVDEGWR FNIMR+EC IEP LEHY+C+VD+L+RTG+LSKAY+FI++MPI PD
Sbjct: 606 YACSHSGLVDEGWRFFNIMRHECNIEPTLEHYACVVDMLARTGDLSKAYRFIESMPIPPD 665
Query: 835 ATIWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQR 656
ATIWG+LLCGCRI+HDV+LAE+VAERVF+LEPENTGYYVL+ANIYAEAEKWEEV +LR+R
Sbjct: 666 ATIWGALLCGCRIHHDVKLAERVAERVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKR 725
Query: 655 IGRKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYA 476
IG++GL+KNPGCSWI IKG+VNIFVAGDSSHP+ IE+LL+R+RARM+EEG++P+ +YA
Sbjct: 726 IGQRGLRKNPGCSWIEIKGRVNIFVAGDSSHPETENIEALLRRVRARMREEGYSPQTKYA 785
Query: 475 LINADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGR 296
LI+A++MEKE A+CGHSEKLAM GIL+S G++IRVTKNLRVCGDCHEMAKFMSK++GR
Sbjct: 786 LIDAEEMEKEEALCGHSEKLAMGLGILTSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTGR 845
Query: 295 EIVLRDSNRFHHFKDGNCSCRGFW 224
EIVLRDSNRFHHFKDG+CSCRGFW
Sbjct: 846 EIVLRDSNRFHHFKDGHCSCRGFW 869
Score = 146 bits (368), Expect = 6e-32
Identities = 83/245 (33%), Positives = 137/245 (55%), Gaps = 4/245 (1%)
Frame = -3
Query: 1528 CNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS- 1352
CN L+DMY+KC ++ A VF M + ++++ +MI GY++ L EA+KLF+EM+++
Sbjct: 331 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEG 390
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
PD TV VL CA L +G+ +H I N D ++ NAL+DMY KCG + A+
Sbjct: 391 ISPDVYTVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSNALMDMYAKCGSMQEAE 450
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFD-EMRDAGIEPDEVSFISILYACSHS 998
L+F +PV+D+ISW ++ GY + + +EA+S F+ + + PDE + + +L AC+
Sbjct: 451 LVFTEMPVRDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFVPDERTVVCVLPACASL 510
Query: 997 GLVDEGWRLFN-IMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWG 821
D+G + IMRN + + + +VD+ ++ G L A + K D W
Sbjct: 511 SAFDKGREIHGYIMRNGFFRDRHVA--NSLVDMYAKCGALLLARLLFDEIASK-DLVSWT 567
Query: 820 SLLCG 806
++ G
Sbjct: 568 VMIAG 572
Score = 127 bits (320), Expect = 2e-26
Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 3/245 (1%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+L+ Y K +E A VF M +D+I+WN+MI GY L + L LF EM
Sbjct: 229 VGNSLLAFYLKNGRVESARKVFDEMTERDVISWNSMINGYVSTGLTEQGLSLFVEMLCSG 288
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
+ D TV V CA + G+ +HG L+ + N L+DMY KCG L A+
Sbjct: 289 IEFDLATVVSVFAGCADSCFVSLGRAVHGIGLKACMSREDRFCNTLLDMYSKCGDLDSAK 348
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEM-RDAGIEPDEVSFISILYACSHS 998
+F + + ++S+T M+AGY G EA+ F EM + GI PD + ++L C+ +
Sbjct: 349 AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFSEMEEEEGISPDVYTVTAVLNCCARN 408
Query: 997 GLVDEGWRLFN-IMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWG 821
L++EG R+ I N+ + L + ++D+ ++ G++ +A MP++ D W
Sbjct: 409 RLLEEGKRVHEWIKENDMGFDIFLS--NALMDMYAKCGSMQEAELVFTEMPVR-DIISWN 465
Query: 820 SLLCG 806
+++ G
Sbjct: 466 TIIGG 470
Score = 103 bits (257), Expect = 4e-19
Identities = 66/234 (28%), Positives = 121/234 (51%), Gaps = 1/234 (0%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
+DSN+ ALM Y C + +A VF + ++ + WN ++ +K + +++LF
Sbjct: 124 VDSNMGSKLALM--YTNCGDLREARRVFDQVRIEKALFWNILMNELAKAGDFSGSIELFE 181
Query: 1369 EMQQKS-KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCG 1193
+M D T +CV + +SL ++ G+++HG++L+ G+ V N+L+ Y+K G
Sbjct: 182 KMMSSGVSMDSYTFSCVSKSFSSLRSVDGGEQLHGYVLKLGFGECSSVGNSLLAFYLKNG 241
Query: 1192 VLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILY 1013
+ A+ +FD + +D+ISW M+ GY G + +S F EM +GIE D + +S+
Sbjct: 242 RVESARKVFDEMTERDVISWNSMINGYVSTGLTEQGLSLFVEMLCSGIEFDLATVVSVFA 301
Query: 1012 ACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTM 851
C+ S V G + I C + + + ++D+ S+ G+L A + M
Sbjct: 302 GCADSCFVSLGRAVHGIGLKAC-MSREDRFCNTLLDMYSKCGDLDSAKAVFREM 354
Score = 67.4 bits (163), Expect = 3e-08
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 4/199 (2%)
Frame = -3
Query: 1390 EALKLFAEMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVD 1211
E + + QK D T+ VL CA +L G+E+ I RNG+ D + + L
Sbjct: 75 ENIAKLLRVSQKYDIDPRTLCSVLQLCADTRSLKHGKEVASFIRRNGFVVDSNMGSKLAL 134
Query: 1210 MYVKCGVLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVS 1031
MY CG L A+ +FD + ++ + W +++ G S +I F++M +G+ D +
Sbjct: 135 MYTNCGDLREARRVFDQVRIEKALFWNILMNELAKAGDFSGSIELFEKMMSSGVSMDSYT 194
Query: 1030 FISILYACSHSGLVDEGWRLFNIMR----NECKIEPKLEHYSCMVDLLSRTGNLSKAYKF 863
F + + S VD G +L + EC + ++ + G + A K
Sbjct: 195 FSCVSKSFSSLRSVDGGEQLHGYVLKLGFGECS-----SVGNSLLAFYLKNGRVESARKV 249
Query: 862 IKTMPIKPDATIWGSLLCG 806
M + D W S++ G
Sbjct: 250 FDEM-TERDVISWNSMING 267
>ref|XP_009132154.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic [Brassica rapa]
Length = 868
Score = 705 bits (1819), Expect = 0.0
Identities = 327/444 (73%), Positives = 394/444 (88%), Gaps = 2/444 (0%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
M ++F+ NALMDMYAKC SM +A +VF MPV+DII+WNT+IGGYSKN NEAL LF
Sbjct: 425 MGFDIFLSNALMDMYAKCGSMGEAEIVFSEMPVRDIISWNTIIGGYSKNCYANEALSLFN 484
Query: 1369 EMQQKSK--PDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKC 1196
+ ++ + PD TV CVLPACASL+A KG+EIHG+I+RNG+F DR+V N+LVDMY KC
Sbjct: 485 LLLEEKRFVPDERTVVCVLPACASLSAFDKGREIHGYIMRNGFFRDRHVANSLVDMYAKC 544
Query: 1195 GVLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISIL 1016
G L+LA+LLFD I KDL+SWTVM+AGYGMHGFG EAI+ FD+ R GIEPDE+SF+S+L
Sbjct: 545 GALLLARLLFDEIASKDLVSWTVMIAGYGMHGFGKEAIALFDQKRREGIEPDEISFVSVL 604
Query: 1015 YACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPD 836
YACSHSGLVDEGWR FNIMR+ECKIEP LEHY+C+VD+L+RTG LSKAY+FI++MPI PD
Sbjct: 605 YACSHSGLVDEGWRFFNIMRHECKIEPTLEHYACVVDMLARTGELSKAYRFIESMPIPPD 664
Query: 835 ATIWGSLLCGCRIYHDVELAEKVAERVFDLEPENTGYYVLLANIYAEAEKWEEVMKLRQR 656
ATIWG+LLCGCRI+HDV+LAE+VAERVF+LEPENTGYYVL+ANIYAEAEKWEEV +LR+R
Sbjct: 665 ATIWGALLCGCRIHHDVKLAERVAERVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKR 724
Query: 655 IGRKGLKKNPGCSWIVIKGKVNIFVAGDSSHPQGGKIESLLKRLRARMKEEGFNPKIRYA 476
IG++GL+KNPGCSWI IKG+VNIFVAGDSSHP+ IE+LL+R+RARM+EEG++P+ +YA
Sbjct: 725 IGQRGLRKNPGCSWIEIKGRVNIFVAGDSSHPETENIEALLRRVRARMREEGYSPQTKYA 784
Query: 475 LINADDMEKEVAVCGHSEKLAMAFGILSSSPGQVIRVTKNLRVCGDCHEMAKFMSKISGR 296
LI+A++MEKE A+CGHSEKLAM GIL+S G++IRVTKNLRVCGDCHEMAKFMSK++GR
Sbjct: 785 LIDAEEMEKEEALCGHSEKLAMGLGILTSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTGR 844
Query: 295 EIVLRDSNRFHHFKDGNCSCRGFW 224
EIVLRDSNRFHHFKDG+CSCRGFW
Sbjct: 845 EIVLRDSNRFHHFKDGHCSCRGFW 868
Score = 147 bits (371), Expect = 3e-32
Identities = 83/244 (34%), Positives = 137/244 (56%), Gaps = 3/244 (1%)
Frame = -3
Query: 1528 CNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS- 1352
CN L+DMY+KC ++ A VF M + ++++ +MI GY++ L EA+KLFAEM+++
Sbjct: 331 CNTLLDMYSKCSDLDSAKAVFTKMSDRSVVSYTSMIAGYAREGLAGEAVKLFAEMEEEGI 390
Query: 1351 KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQL 1172
PD TV VL CA L +G+ +H I N D ++ NAL+DMY KCG + A++
Sbjct: 391 SPDVYTVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSNALMDMYAKCGSMGEAEI 450
Query: 1171 LFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFD-EMRDAGIEPDEVSFISILYACSHSG 995
+F +PV+D+ISW ++ GY + + +EA+S F+ + + PDE + + +L AC+
Sbjct: 451 VFSEMPVRDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFVPDERTVVCVLPACASLS 510
Query: 994 LVDEGWRLFN-IMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGS 818
D+G + IMRN + + + +VD+ ++ G L A + K D W
Sbjct: 511 AFDKGREIHGYIMRNGFFRDRHVA--NSLVDMYAKCGALLLARLLFDEIASK-DLVSWTV 567
Query: 817 LLCG 806
++ G
Sbjct: 568 MIAG 571
Score = 129 bits (325), Expect = 5e-27
Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 2/244 (0%)
Frame = -3
Query: 1531 VCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFAEMQQKS 1352
V N+L+ Y K +E A VF M +D+I+WN+MI GY L + L LF EM
Sbjct: 229 VGNSLLAFYLKNGRVESARKVFDEMTERDVISWNSMINGYVSTGLTEQGLYLFVEMLCSG 288
Query: 1351 -KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCGVLVLAQ 1175
+ D TV V CA + G+ +HG L+ + N L+DMY KC L A+
Sbjct: 289 IEFDLATVVSVFAGCADSCLVSLGRAVHGIGLKACMSREDRFCNTLLDMYSKCSDLDSAK 348
Query: 1174 LLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILYACSHSG 995
+F + + ++S+T M+AGY G EA+ F EM + GI PD + ++L C+ +
Sbjct: 349 AVFTKMSDRSVVSYTSMIAGYAREGLAGEAVKLFAEMEEEGISPDVYTVTAVLNCCARNR 408
Query: 994 LVDEGWRLFN-IMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDATIWGS 818
L++EG R+ I N+ + L + ++D+ ++ G++ +A MP++ D W +
Sbjct: 409 LLEEGKRVHEWIKENDMGFDIFLS--NALMDMYAKCGSMGEAEIVFSEMPVR-DIISWNT 465
Query: 817 LLCG 806
++ G
Sbjct: 466 IIGG 469
Score = 99.8 bits (247), Expect = 6e-18
Identities = 73/272 (26%), Positives = 136/272 (50%), Gaps = 1/272 (0%)
Frame = -3
Query: 1549 MDSNLFVCNALMDMYAKCRSMEDAHLVFYNMPVKDIIAWNTMIGGYSKNNLPNEALKLFA 1370
+DSN+ ALM Y C + +A VF + ++ + WN ++ +K + +++LF
Sbjct: 124 VDSNMGSKLALM--YTNCGDLREARRVFDQVRIEKALFWNILMNELAKAGDFSGSIELFE 181
Query: 1369 EMQQKS-KPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVDMYVKCG 1193
+M + D T +CV + +SL ++ G+++HG++L+ G+ V N+L+ Y+K G
Sbjct: 182 KMMGSGVEMDSYTFSCVSKSFSSLRSVDGGEQLHGYVLKLGFGECSSVGNSLLAFYLKNG 241
Query: 1192 VLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVSFISILY 1013
+ A+ +FD + +D+ISW M+ GY G + + F EM +GIE D + +S+
Sbjct: 242 RVESARKVFDEMTERDVISWNSMINGYVSTGLTEQGLYLFVEMLCSGIEFDLATVVSVFA 301
Query: 1012 ACSHSGLVDEGWRLFNIMRNECKIEPKLEHYSCMVDLLSRTGNLSKAYKFIKTMPIKPDA 833
C+ S LV G + I C + + + ++D+ S+ +L A K + T
Sbjct: 302 GCADSCLVSLGRAVHGIGLKAC-MSREDRFCNTLLDMYSKCSDLDSA-KAVFTKMSDRSV 359
Query: 832 TIWGSLLCGCRIYHDVELAEKVAERVFDLEPE 737
+ S++ G Y LA + + ++E E
Sbjct: 360 VSYTSMIAG---YAREGLAGEAVKLFAEMEEE 388
Score = 67.8 bits (164), Expect = 3e-08
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 4/199 (2%)
Frame = -3
Query: 1390 EALKLFAEMQQKSKPDRVTVACVLPACASLAALGKGQEIHGHILRNGYFTDRYVVNALVD 1211
E + + QK D T+ VL CA +L G+E+ I RNG D + + L
Sbjct: 75 ENIAKLLRVSQKYDIDPRTLCSVLQLCADTRSLKHGKEVDSFIRRNGVVVDSNMGSKLAL 134
Query: 1210 MYVKCGVLVLAQLLFDMIPVKDLISWTVMVAGYGMHGFGSEAISAFDEMRDAGIEPDEVS 1031
MY CG L A+ +FD + ++ + W +++ G S +I F++M +G+E D +
Sbjct: 135 MYTNCGDLREARRVFDQVRIEKALFWNILMNELAKAGDFSGSIELFEKMMGSGVEMDSYT 194
Query: 1030 FISILYACSHSGLVDEGWRLFNIMR----NECKIEPKLEHYSCMVDLLSRTGNLSKAYKF 863
F + + S VD G +L + EC + ++ + G + A K
Sbjct: 195 FSCVSKSFSSLRSVDGGEQLHGYVLKLGFGECS-----SVGNSLLAFYLKNGRVESARKV 249
Query: 862 IKTMPIKPDATIWGSLLCG 806
M + D W S++ G
Sbjct: 250 FDEM-TERDVISWNSMING 267