BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00006810
         (2444 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007012187.1| Poly(A) polymerase 1 isoform 6 [Theobroma ca...   642   0.0  
ref|XP_007012186.1| Poly(A) polymerase 1 isoform 5 [Theobroma ca...   642   0.0  
ref|XP_007012185.1| Poly(A) polymerase 1 isoform 4 [Theobroma ca...   642   0.0  
ref|XP_007012184.1| Poly(A) polymerase 1 isoform 3 [Theobroma ca...   642   0.0  
ref|XP_007012183.1| Poly(A) polymerase 1 isoform 2 [Theobroma ca...   642   0.0  
ref|XP_007012182.1| Poly(A) polymerase 1 isoform 1 [Theobroma ca...   642   0.0  
gb|KJB07461.1| hypothetical protein B456_001G025900 [Gossypium r...   630   e-179
ref|XP_011010888.1| PREDICTED: nuclear poly(A) polymerase 4 isof...   631   e-178
ref|XP_011010887.1| PREDICTED: nuclear poly(A) polymerase 4 isof...   631   e-178
ref|XP_012434772.1| PREDICTED: nuclear poly(A) polymerase 4 isof...   630   e-177
ref|XP_012434911.1| PREDICTED: nuclear poly(A) polymerase 4 isof...   630   e-177
ref|XP_012435059.1| PREDICTED: nuclear poly(A) polymerase 4 isof...   630   e-177
ref|XP_012435284.1| PREDICTED: nuclear poly(A) polymerase 4 isof...   630   e-177
ref|XP_012435194.1| PREDICTED: nuclear poly(A) polymerase 4 isof...   630   e-177
gb|KJB07462.1| hypothetical protein B456_001G025900 [Gossypium r...   630   e-177
gb|KJB07467.1| hypothetical protein B456_001G025900 [Gossypium r...   630   e-177
gb|KJB07468.1| hypothetical protein B456_001G025900 [Gossypium r...   630   e-177
ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus c...   629   e-177
gb|KDP34179.1| hypothetical protein JCGZ_07750 [Jatropha curcas]      629   e-177
ref|XP_007224438.1| hypothetical protein PRUPE_ppa021844mg, part...   629   e-177

>ref|XP_007012187.1| Poly(A) polymerase 1 isoform 6 [Theobroma cacao]
            gi|508782550|gb|EOY29806.1| Poly(A) polymerase 1 isoform
            6 [Theobroma cacao]
          Length = 751

 Score =  642 bits (1656), Expect(2) = 0.0
 Identities = 334/520 (64%), Positives = 379/520 (72%), Gaps = 23/520 (4%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNVEHFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+AI
Sbjct: 206  RVADQILKLVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAI 265

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 266  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 325

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVSISTLRVMMEQF   NRI E+IELNK+QW+ LFEPY FFEAYKNYLQVDI++A+A
Sbjct: 326  SSYNVSISTLRVMMEQFQCGNRICEEIELNKSQWNALFEPYLFFEAYKNYLQVDIVSAEA 385

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 386  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 445

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             GQEGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG+KR R  RH
Sbjct: 446  SGQEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRH 505

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
                  K CE+ +  QSGS E+  KRK + E  D K  +P+K++ I              
Sbjct: 506  PGQQTGKICEDITRSQSGSVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA 565

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMR-SSGHLDSEKCTLANDVEMVNTMHE-SI 1189
              SG TSH S    V +E  T  D DS+S +R SSG LDSEK  +   ++   T+ + S+
Sbjct: 566  SRSGGTSHISDGQMVTLERPTTWDVDSNSVLRQSSGLLDSEKRNVGISIQQARTVDQGSL 625

Query: 1188 NLEEQASVS-EHSLPGVGN------------------KXXXXXXEFKGTNQIGLNGEDLL 1066
             L  Q S+   H+L  V N                         E + T + G+N E   
Sbjct: 626  TLSGQTSLDVVHNLSVVRNVESAEQMGEPFLRQESHSPCEVPDSELRETCKTGVNQEKTG 685

Query: 1065 FVDT--MSVKAKSYTGRLLGWTKGAVDIDQELNKPCNHTA 952
               +  M+      + R+L W  G V +DQE+ KPCN TA
Sbjct: 686  DYSSAYMNDAETGSSRRILNWKGGGVGVDQEVVKPCNQTA 725



 Score = 30.8 bits (68), Expect(2) = 0.0
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -2

Query: 943 ECVYKSSSSTWNLNCKVSFSV 881
           E V+ SSS+  NLNC+VSFSV
Sbjct: 731 ESVFGSSSNAQNLNCEVSFSV 751


>ref|XP_007012186.1| Poly(A) polymerase 1 isoform 5 [Theobroma cacao]
            gi|508782549|gb|EOY29805.1| Poly(A) polymerase 1 isoform
            5 [Theobroma cacao]
          Length = 801

 Score =  642 bits (1656), Expect = 0.0
 Identities = 334/520 (64%), Positives = 379/520 (72%), Gaps = 23/520 (4%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNVEHFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+AI
Sbjct: 206  RVADQILKLVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAI 265

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 266  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 325

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVSISTLRVMMEQF   NRI E+IELNK+QW+ LFEPY FFEAYKNYLQVDI++A+A
Sbjct: 326  SSYNVSISTLRVMMEQFQCGNRICEEIELNKSQWNALFEPYLFFEAYKNYLQVDIVSAEA 385

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 386  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 445

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             GQEGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG+KR R  RH
Sbjct: 446  SGQEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRH 505

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
                  K CE+ +  QSGS E+  KRK + E  D K  +P+K++ I              
Sbjct: 506  PGQQTGKICEDITRSQSGSVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA 565

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMR-SSGHLDSEKCTLANDVEMVNTMHE-SI 1189
              SG TSH S    V +E  T  D DS+S +R SSG LDSEK  +   ++   T+ + S+
Sbjct: 566  SRSGGTSHISDGQMVTLERPTTWDVDSNSVLRQSSGLLDSEKRNVGISIQQARTVDQGSL 625

Query: 1188 NLEEQASVS-EHSLPGVGN------------------KXXXXXXEFKGTNQIGLNGEDLL 1066
             L  Q S+   H+L  V N                         E + T + G+N E   
Sbjct: 626  TLSGQTSLDVVHNLSVVRNVESAEQMGEPFLRQESHSPCEVPDSELRETCKTGVNQEKTG 685

Query: 1065 FVDT--MSVKAKSYTGRLLGWTKGAVDIDQELNKPCNHTA 952
               +  M+      + R+L W  G V +DQE+ KPCN TA
Sbjct: 686  DYSSAYMNDAETGSSRRILNWKGGGVGVDQEVVKPCNQTA 725


>ref|XP_007012185.1| Poly(A) polymerase 1 isoform 4 [Theobroma cacao]
            gi|508782548|gb|EOY29804.1| Poly(A) polymerase 1 isoform
            4 [Theobroma cacao]
          Length = 804

 Score =  642 bits (1656), Expect = 0.0
 Identities = 334/520 (64%), Positives = 379/520 (72%), Gaps = 23/520 (4%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNVEHFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+AI
Sbjct: 206  RVADQILKLVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAI 265

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 266  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 325

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVSISTLRVMMEQF   NRI E+IELNK+QW+ LFEPY FFEAYKNYLQVDI++A+A
Sbjct: 326  SSYNVSISTLRVMMEQFQCGNRICEEIELNKSQWNALFEPYLFFEAYKNYLQVDIVSAEA 385

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 386  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 445

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             GQEGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG+KR R  RH
Sbjct: 446  SGQEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRH 505

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
                  K CE+ +  QSGS E+  KRK + E  D K  +P+K++ I              
Sbjct: 506  PGQQTGKICEDITRSQSGSVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA 565

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMR-SSGHLDSEKCTLANDVEMVNTMHE-SI 1189
              SG TSH S    V +E  T  D DS+S +R SSG LDSEK  +   ++   T+ + S+
Sbjct: 566  SRSGGTSHISDGQMVTLERPTTWDVDSNSVLRQSSGLLDSEKRNVGISIQQARTVDQGSL 625

Query: 1188 NLEEQASVS-EHSLPGVGN------------------KXXXXXXEFKGTNQIGLNGEDLL 1066
             L  Q S+   H+L  V N                         E + T + G+N E   
Sbjct: 626  TLSGQTSLDVVHNLSVVRNVESAEQMGEPFLRQESHSPCEVPDSELRETCKTGVNQEKTG 685

Query: 1065 FVDT--MSVKAKSYTGRLLGWTKGAVDIDQELNKPCNHTA 952
               +  M+      + R+L W  G V +DQE+ KPCN TA
Sbjct: 686  DYSSAYMNDAETGSSRRILNWKGGGVGVDQEVVKPCNQTA 725


>ref|XP_007012184.1| Poly(A) polymerase 1 isoform 3 [Theobroma cacao]
            gi|508782547|gb|EOY29803.1| Poly(A) polymerase 1 isoform
            3 [Theobroma cacao]
          Length = 811

 Score =  642 bits (1656), Expect = 0.0
 Identities = 334/520 (64%), Positives = 379/520 (72%), Gaps = 23/520 (4%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNVEHFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+AI
Sbjct: 206  RVADQILKLVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAI 265

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 266  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 325

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVSISTLRVMMEQF   NRI E+IELNK+QW+ LFEPY FFEAYKNYLQVDI++A+A
Sbjct: 326  SSYNVSISTLRVMMEQFQCGNRICEEIELNKSQWNALFEPYLFFEAYKNYLQVDIVSAEA 385

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 386  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 445

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             GQEGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG+KR R  RH
Sbjct: 446  SGQEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRH 505

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
                  K CE+ +  QSGS E+  KRK + E  D K  +P+K++ I              
Sbjct: 506  PGQQTGKICEDITRSQSGSVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA 565

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMR-SSGHLDSEKCTLANDVEMVNTMHE-SI 1189
              SG TSH S    V +E  T  D DS+S +R SSG LDSEK  +   ++   T+ + S+
Sbjct: 566  SRSGGTSHISDGQMVTLERPTTWDVDSNSVLRQSSGLLDSEKRNVGISIQQARTVDQGSL 625

Query: 1188 NLEEQASVS-EHSLPGVGN------------------KXXXXXXEFKGTNQIGLNGEDLL 1066
             L  Q S+   H+L  V N                         E + T + G+N E   
Sbjct: 626  TLSGQTSLDVVHNLSVVRNVESAEQMGEPFLRQESHSPCEVPDSELRETCKTGVNQEKTG 685

Query: 1065 FVDT--MSVKAKSYTGRLLGWTKGAVDIDQELNKPCNHTA 952
               +  M+      + R+L W  G V +DQE+ KPCN TA
Sbjct: 686  DYSSAYMNDAETGSSRRILNWKGGGVGVDQEVVKPCNQTA 725


>ref|XP_007012183.1| Poly(A) polymerase 1 isoform 2 [Theobroma cacao]
            gi|508782546|gb|EOY29802.1| Poly(A) polymerase 1 isoform
            2 [Theobroma cacao]
          Length = 812

 Score =  642 bits (1656), Expect = 0.0
 Identities = 334/520 (64%), Positives = 379/520 (72%), Gaps = 23/520 (4%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNVEHFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+AI
Sbjct: 206  RVADQILKLVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAI 265

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 266  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 325

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVSISTLRVMMEQF   NRI E+IELNK+QW+ LFEPY FFEAYKNYLQVDI++A+A
Sbjct: 326  SSYNVSISTLRVMMEQFQCGNRICEEIELNKSQWNALFEPYLFFEAYKNYLQVDIVSAEA 385

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 386  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 445

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             GQEGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG+KR R  RH
Sbjct: 446  SGQEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRH 505

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
                  K CE+ +  QSGS E+  KRK + E  D K  +P+K++ I              
Sbjct: 506  PGQQTGKICEDITRSQSGSVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA 565

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMR-SSGHLDSEKCTLANDVEMVNTMHE-SI 1189
              SG TSH S    V +E  T  D DS+S +R SSG LDSEK  +   ++   T+ + S+
Sbjct: 566  SRSGGTSHISDGQMVTLERPTTWDVDSNSVLRQSSGLLDSEKRNVGISIQQARTVDQGSL 625

Query: 1188 NLEEQASVS-EHSLPGVGN------------------KXXXXXXEFKGTNQIGLNGEDLL 1066
             L  Q S+   H+L  V N                         E + T + G+N E   
Sbjct: 626  TLSGQTSLDVVHNLSVVRNVESAEQMGEPFLRQESHSPCEVPDSELRETCKTGVNQEKTG 685

Query: 1065 FVDT--MSVKAKSYTGRLLGWTKGAVDIDQELNKPCNHTA 952
               +  M+      + R+L W  G V +DQE+ KPCN TA
Sbjct: 686  DYSSAYMNDAETGSSRRILNWKGGGVGVDQEVVKPCNQTA 725


>ref|XP_007012182.1| Poly(A) polymerase 1 isoform 1 [Theobroma cacao]
            gi|508782545|gb|EOY29801.1| Poly(A) polymerase 1 isoform
            1 [Theobroma cacao]
          Length = 817

 Score =  642 bits (1656), Expect = 0.0
 Identities = 334/520 (64%), Positives = 379/520 (72%), Gaps = 23/520 (4%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNVEHFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+AI
Sbjct: 206  RVADQILKLVPNVEHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAI 265

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 266  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 325

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVSISTLRVMMEQF   NRI E+IELNK+QW+ LFEPY FFEAYKNYLQVDI++A+A
Sbjct: 326  SSYNVSISTLRVMMEQFQCGNRICEEIELNKSQWNALFEPYLFFEAYKNYLQVDIVSAEA 385

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 386  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 445

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             GQEGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG+KR R  RH
Sbjct: 446  SGQEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRH 505

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
                  K CE+ +  QSGS E+  KRK + E  D K  +P+K++ I              
Sbjct: 506  PGQQTGKICEDITRSQSGSVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA 565

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMR-SSGHLDSEKCTLANDVEMVNTMHE-SI 1189
              SG TSH S    V +E  T  D DS+S +R SSG LDSEK  +   ++   T+ + S+
Sbjct: 566  SRSGGTSHISDGQMVTLERPTTWDVDSNSVLRQSSGLLDSEKRNVGISIQQARTVDQGSL 625

Query: 1188 NLEEQASVS-EHSLPGVGN------------------KXXXXXXEFKGTNQIGLNGEDLL 1066
             L  Q S+   H+L  V N                         E + T + G+N E   
Sbjct: 626  TLSGQTSLDVVHNLSVVRNVESAEQMGEPFLRQESHSPCEVPDSELRETCKTGVNQEKTG 685

Query: 1065 FVDT--MSVKAKSYTGRLLGWTKGAVDIDQELNKPCNHTA 952
               +  M+      + R+L W  G V +DQE+ KPCN TA
Sbjct: 686  DYSSAYMNDAETGSSRRILNWKGGGVGVDQEVVKPCNQTA 725


>gb|KJB07461.1| hypothetical protein B456_001G025900 [Gossypium raimondii]
          Length = 715

 Score =  630 bits (1624), Expect(2) = e-179
 Identities = 328/507 (64%), Positives = 372/507 (73%), Gaps = 8/507 (1%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNV+HFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+A+
Sbjct: 206  RVADQILKLVPNVKHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAV 265

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 266  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 325

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVS+STLRVMMEQF   NRI E+IELNKAQWS LFEP+ FFEAYKNYLQVDI++ADA
Sbjct: 326  SSYNVSLSTLRVMMEQFQFGNRICEEIELNKAQWSALFEPHLFFEAYKNYLQVDIVSADA 385

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 386  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 445

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             G EGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG++R R LRH
Sbjct: 446  SGLEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYRRPRSLRH 505

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
             S    K+CE+ +  +SGSAE+  KRK D ET+D K  +PEK+A I              
Sbjct: 506  PSQQTGKTCEDVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIIT 565

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMRSSGHLDSEKCTLANDVEMVNTMHESINL 1183
              S  TSH S    V VE    VD DS   +R    LD +  ++   VE      E I L
Sbjct: 566  SKSVGTSHNSNGQAVKVEHRGTVDLDS---LRGQTSLDIDDSSVVRSVESA----EQIGL 618

Query: 1182 ---EEQASVSEHSLPGVGNKXXXXXXEFKGTNQIGLNGEDL-----LFVDTMSVKAKSYT 1027
               +E  S  E S             E + T + GLN E        F++   + +   +
Sbjct: 619  PFRQELLSPCEVS-----------DFETRETCKAGLNQEKTADSTSAFINDPEIGS---S 664

Query: 1026 GRLLGWTKGAVDIDQELNKPCNHTAGI 946
             R+L W     ++DQE+ K CN TA +
Sbjct: 665  RRILNWKGVGAEVDQEVVKACNQTAAV 691



 Score = 30.0 bits (66), Expect(2) = e-179
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -2

Query: 943 ECVYKSSSSTWNLNCKVSFSV 881
           E V+ SSS+  NLNCKVSF V
Sbjct: 695 ESVFGSSSNAQNLNCKVSFFV 715


>ref|XP_011010888.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X2 [Populus
            euphratica]
          Length = 789

 Score =  631 bits (1628), Expect = e-178
 Identities = 334/518 (64%), Positives = 378/518 (72%), Gaps = 21/518 (4%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+AI
Sbjct: 201  RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAI 260

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ LGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 261  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDALGFPVWDPRKNPRDRFHHMPIITPAYPCMN 320

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVS STLRVM EQF   NRI E+IELNKAQWS LFEPY FFEAYKNYLQVDI+AA A
Sbjct: 321  SSYNVSTSTLRVMTEQFQSGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAAVA 380

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY D SK CP+ AFF+GLQRKEGV
Sbjct: 381  ADLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYIDASKQCPHCAFFMGLQRKEGV 440

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
              QEGQQFDIRGTVDEFRQEINMYMFWKPGM+IYVSHVRR+QLP F+FPDG+KRSR  RH
Sbjct: 441  TSQEGQQFDIRGTVDEFRQEINMYMFWKPGMEIYVSHVRRRQLPGFVFPDGYKRSRSSRH 500

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
            V+    K+ E+ +  QSGSAE+  KRK D E  DLK   PEK+A                
Sbjct: 501  VNQHTSKTGEDVARSQSGSAERPVKRKNDCEMEDLK---PEKRALNSPIRPQSVSPSSSV 557

Query: 1362 XXSGITSHTSFNDRVIVESLTM------VDRDSSSEMR-SSGHLDSEKCTLANDVEMVNT 1204
              SG+TS  S  + V +   T+       D  S+SE+R SSG L+SEK  L + +++  T
Sbjct: 558  SRSGVTSLASSCEGVKLGCSTIDIGSNCKDVASNSEVRSSSGQLESEKDGLGDAMQLGET 617

Query: 1203 MHESINLEEQASVSEHSLPGVGN-----------KXXXXXXEFKGTNQIGLNGEDLLFVD 1057
            +++   L  Q S+  H    V N           +      E    ++ G+N  D +   
Sbjct: 618  VYQDSPLNRQISMDVHDSKIVRNELEPANNMNGIEPMEQNFETGEKHETGVN--DKIAGL 675

Query: 1056 TMSVKAKSYTGRLLGWTKG---AVDIDQELNKPCNHTA 952
              ++     + +LL W  G   AV++DQEL KPC  TA
Sbjct: 676  GSNIMESGSSRKLLNWVAGTSQAVEVDQELVKPCCQTA 713


>ref|XP_011010887.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X1 [Populus
            euphratica]
          Length = 799

 Score =  631 bits (1628), Expect = e-178
 Identities = 334/518 (64%), Positives = 378/518 (72%), Gaps = 21/518 (4%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+AI
Sbjct: 201  RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAI 260

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ LGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 261  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDALGFPVWDPRKNPRDRFHHMPIITPAYPCMN 320

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVS STLRVM EQF   NRI E+IELNKAQWS LFEPY FFEAYKNYLQVDI+AA A
Sbjct: 321  SSYNVSTSTLRVMTEQFQSGNRICEEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAAVA 380

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY D SK CP+ AFF+GLQRKEGV
Sbjct: 381  ADLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYIDASKQCPHCAFFMGLQRKEGV 440

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
              QEGQQFDIRGTVDEFRQEINMYMFWKPGM+IYVSHVRR+QLP F+FPDG+KRSR  RH
Sbjct: 441  TSQEGQQFDIRGTVDEFRQEINMYMFWKPGMEIYVSHVRRRQLPGFVFPDGYKRSRSSRH 500

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
            V+    K+ E+ +  QSGSAE+  KRK D E  DLK   PEK+A                
Sbjct: 501  VNQHTSKTGEDVARSQSGSAERPVKRKNDCEMEDLK---PEKRALNSPIRPQSVSPSSSV 557

Query: 1362 XXSGITSHTSFNDRVIVESLTM------VDRDSSSEMR-SSGHLDSEKCTLANDVEMVNT 1204
              SG+TS  S  + V +   T+       D  S+SE+R SSG L+SEK  L + +++  T
Sbjct: 558  SRSGVTSLASSCEGVKLGCSTIDIGSNCKDVASNSEVRSSSGQLESEKDGLGDAMQLGET 617

Query: 1203 MHESINLEEQASVSEHSLPGVGN-----------KXXXXXXEFKGTNQIGLNGEDLLFVD 1057
            +++   L  Q S+  H    V N           +      E    ++ G+N  D +   
Sbjct: 618  VYQDSPLNRQISMDVHDSKIVRNELEPANNMNGIEPMEQNFETGEKHETGVN--DKIAGL 675

Query: 1056 TMSVKAKSYTGRLLGWTKG---AVDIDQELNKPCNHTA 952
              ++     + +LL W  G   AV++DQEL KPC  TA
Sbjct: 676  GSNIMESGSSRKLLNWVAGTSQAVEVDQELVKPCCQTA 713


>ref|XP_012434772.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X1 [Gossypium
            raimondii] gi|823120684|ref|XP_012434842.1| PREDICTED:
            nuclear poly(A) polymerase 4 isoform X1 [Gossypium
            raimondii] gi|763739964|gb|KJB07463.1| hypothetical
            protein B456_001G025900 [Gossypium raimondii]
          Length = 776

 Score =  630 bits (1624), Expect(2) = e-177
 Identities = 328/507 (64%), Positives = 372/507 (73%), Gaps = 8/507 (1%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNV+HFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+A+
Sbjct: 206  RVADQILKLVPNVKHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAV 265

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 266  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 325

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVS+STLRVMMEQF   NRI E+IELNKAQWS LFEP+ FFEAYKNYLQVDI++ADA
Sbjct: 326  SSYNVSLSTLRVMMEQFQFGNRICEEIELNKAQWSALFEPHLFFEAYKNYLQVDIVSADA 385

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 386  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 445

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             G EGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG++R R LRH
Sbjct: 446  SGLEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYRRPRSLRH 505

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
             S    K+CE+ +  +SGSAE+  KRK D ET+D K  +PEK+A I              
Sbjct: 506  PSQQTGKTCEDVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIIT 565

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMRSSGHLDSEKCTLANDVEMVNTMHESINL 1183
              S  TSH S    V VE    VD DS   +R    LD +  ++   VE      E I L
Sbjct: 566  SKSVGTSHNSNGQAVKVEHRGTVDLDS---LRGQTSLDIDDSSVVRSVESA----EQIGL 618

Query: 1182 ---EEQASVSEHSLPGVGNKXXXXXXEFKGTNQIGLNGEDL-----LFVDTMSVKAKSYT 1027
               +E  S  E S             E + T + GLN E        F++   + +   +
Sbjct: 619  PFRQELLSPCEVS-----------DFETRETCKAGLNQEKTADSTSAFINDPEIGS---S 664

Query: 1026 GRLLGWTKGAVDIDQELNKPCNHTAGI 946
             R+L W     ++DQE+ K CN TA +
Sbjct: 665  RRILNWKGVGAEVDQEVVKACNQTAAV 691



 Score = 24.3 bits (51), Expect(2) = e-177
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 943 ECVYKSSSSTWNLNCKVS 890
           E V+ SSS+  NLNCK S
Sbjct: 695 ESVFGSSSNAQNLNCKGS 712


>ref|XP_012434911.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X2 [Gossypium
            raimondii] gi|823120688|ref|XP_012434982.1| PREDICTED:
            nuclear poly(A) polymerase 4 isoform X2 [Gossypium
            raimondii] gi|763739960|gb|KJB07459.1| hypothetical
            protein B456_001G025900 [Gossypium raimondii]
            gi|763739961|gb|KJB07460.1| hypothetical protein
            B456_001G025900 [Gossypium raimondii]
            gi|763739967|gb|KJB07466.1| hypothetical protein
            B456_001G025900 [Gossypium raimondii]
          Length = 775

 Score =  630 bits (1624), Expect(2) = e-177
 Identities = 328/507 (64%), Positives = 372/507 (73%), Gaps = 8/507 (1%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNV+HFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+A+
Sbjct: 206  RVADQILKLVPNVKHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAV 265

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 266  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 325

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVS+STLRVMMEQF   NRI E+IELNKAQWS LFEP+ FFEAYKNYLQVDI++ADA
Sbjct: 326  SSYNVSLSTLRVMMEQFQFGNRICEEIELNKAQWSALFEPHLFFEAYKNYLQVDIVSADA 385

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 386  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 445

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             G EGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG++R R LRH
Sbjct: 446  SGLEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYRRPRSLRH 505

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
             S    K+CE+ +  +SGSAE+  KRK D ET+D K  +PEK+A I              
Sbjct: 506  PSQQTGKTCEDVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIIT 565

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMRSSGHLDSEKCTLANDVEMVNTMHESINL 1183
              S  TSH S    V VE    VD DS   +R    LD +  ++   VE      E I L
Sbjct: 566  SKSVGTSHNSNGQAVKVEHRGTVDLDS---LRGQTSLDIDDSSVVRSVESA----EQIGL 618

Query: 1182 ---EEQASVSEHSLPGVGNKXXXXXXEFKGTNQIGLNGEDL-----LFVDTMSVKAKSYT 1027
               +E  S  E S             E + T + GLN E        F++   + +   +
Sbjct: 619  PFRQELLSPCEVS-----------DFETRETCKAGLNQEKTADSTSAFINDPEIGS---S 664

Query: 1026 GRLLGWTKGAVDIDQELNKPCNHTAGI 946
             R+L W     ++DQE+ K CN TA +
Sbjct: 665  RRILNWKGVGAEVDQEVVKACNQTAAV 691



 Score = 24.3 bits (51), Expect(2) = e-177
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 943 ECVYKSSSSTWNLNCKVS 890
           E V+ SSS+  NLNCK S
Sbjct: 695 ESVFGSSSNAQNLNCKGS 712


>ref|XP_012435059.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X3 [Gossypium
            raimondii] gi|823120692|ref|XP_012435128.1| PREDICTED:
            nuclear poly(A) polymerase 4 isoform X3 [Gossypium
            raimondii] gi|763739965|gb|KJB07464.1| hypothetical
            protein B456_001G025900 [Gossypium raimondii]
          Length = 766

 Score =  630 bits (1624), Expect(2) = e-177
 Identities = 328/507 (64%), Positives = 372/507 (73%), Gaps = 8/507 (1%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNV+HFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+A+
Sbjct: 206  RVADQILKLVPNVKHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAV 265

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 266  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 325

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVS+STLRVMMEQF   NRI E+IELNKAQWS LFEP+ FFEAYKNYLQVDI++ADA
Sbjct: 326  SSYNVSLSTLRVMMEQFQFGNRICEEIELNKAQWSALFEPHLFFEAYKNYLQVDIVSADA 385

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 386  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 445

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             G EGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG++R R LRH
Sbjct: 446  SGLEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYRRPRSLRH 505

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
             S    K+CE+ +  +SGSAE+  KRK D ET+D K  +PEK+A I              
Sbjct: 506  PSQQTGKTCEDVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIIT 565

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMRSSGHLDSEKCTLANDVEMVNTMHESINL 1183
              S  TSH S    V VE    VD DS   +R    LD +  ++   VE      E I L
Sbjct: 566  SKSVGTSHNSNGQAVKVEHRGTVDLDS---LRGQTSLDIDDSSVVRSVESA----EQIGL 618

Query: 1182 ---EEQASVSEHSLPGVGNKXXXXXXEFKGTNQIGLNGEDL-----LFVDTMSVKAKSYT 1027
               +E  S  E S             E + T + GLN E        F++   + +   +
Sbjct: 619  PFRQELLSPCEVS-----------DFETRETCKAGLNQEKTADSTSAFINDPEIGS---S 664

Query: 1026 GRLLGWTKGAVDIDQELNKPCNHTAGI 946
             R+L W     ++DQE+ K CN TA +
Sbjct: 665  RRILNWKGVGAEVDQEVVKACNQTAAV 691



 Score = 24.3 bits (51), Expect(2) = e-177
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 943 ECVYKSSSSTWNLNCKVS 890
           E V+ SSS+  NLNCK S
Sbjct: 695 ESVFGSSSNAQNLNCKGS 712


>ref|XP_012435284.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X5 [Gossypium
            raimondii]
          Length = 765

 Score =  630 bits (1624), Expect(2) = e-177
 Identities = 328/507 (64%), Positives = 372/507 (73%), Gaps = 8/507 (1%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNV+HFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+A+
Sbjct: 206  RVADQILKLVPNVKHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAV 265

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 266  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 325

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVS+STLRVMMEQF   NRI E+IELNKAQWS LFEP+ FFEAYKNYLQVDI++ADA
Sbjct: 326  SSYNVSLSTLRVMMEQFQFGNRICEEIELNKAQWSALFEPHLFFEAYKNYLQVDIVSADA 385

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 386  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 445

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             G EGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG++R R LRH
Sbjct: 446  SGLEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYRRPRSLRH 505

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
             S    K+CE+ +  +SGSAE+  KRK D ET+D K  +PEK+A I              
Sbjct: 506  PSQQTGKTCEDVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIIT 565

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMRSSGHLDSEKCTLANDVEMVNTMHESINL 1183
              S  TSH S    V VE    VD DS   +R    LD +  ++   VE      E I L
Sbjct: 566  SKSVGTSHNSNGQAVKVEHRGTVDLDS---LRGQTSLDIDDSSVVRSVESA----EQIGL 618

Query: 1182 ---EEQASVSEHSLPGVGNKXXXXXXEFKGTNQIGLNGEDL-----LFVDTMSVKAKSYT 1027
               +E  S  E S             E + T + GLN E        F++   + +   +
Sbjct: 619  PFRQELLSPCEVS-----------DFETRETCKAGLNQEKTADSTSAFINDPEIGS---S 664

Query: 1026 GRLLGWTKGAVDIDQELNKPCNHTAGI 946
             R+L W     ++DQE+ K CN TA +
Sbjct: 665  RRILNWKGVGAEVDQEVVKACNQTAAV 691



 Score = 24.3 bits (51), Expect(2) = e-177
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 943 ECVYKSSSSTWNLNCKVS 890
           E V+ SSS+  NLNCK S
Sbjct: 695 ESVFGSSSNAQNLNCKGS 712


>ref|XP_012435194.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X4 [Gossypium
            raimondii] gi|823120696|ref|XP_012435268.1| PREDICTED:
            nuclear poly(A) polymerase 4 isoform X4 [Gossypium
            raimondii] gi|763739959|gb|KJB07458.1| hypothetical
            protein B456_001G025900 [Gossypium raimondii]
            gi|763739966|gb|KJB07465.1| hypothetical protein
            B456_001G025900 [Gossypium raimondii]
          Length = 765

 Score =  630 bits (1624), Expect(2) = e-177
 Identities = 328/507 (64%), Positives = 372/507 (73%), Gaps = 8/507 (1%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNV+HFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+A+
Sbjct: 206  RVADQILKLVPNVKHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAV 265

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 266  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 325

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVS+STLRVMMEQF   NRI E+IELNKAQWS LFEP+ FFEAYKNYLQVDI++ADA
Sbjct: 326  SSYNVSLSTLRVMMEQFQFGNRICEEIELNKAQWSALFEPHLFFEAYKNYLQVDIVSADA 385

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 386  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 445

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             G EGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG++R R LRH
Sbjct: 446  SGLEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYRRPRSLRH 505

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
             S    K+CE+ +  +SGSAE+  KRK D ET+D K  +PEK+A I              
Sbjct: 506  PSQQTGKTCEDVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIIT 565

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMRSSGHLDSEKCTLANDVEMVNTMHESINL 1183
              S  TSH S    V VE    VD DS   +R    LD +  ++   VE      E I L
Sbjct: 566  SKSVGTSHNSNGQAVKVEHRGTVDLDS---LRGQTSLDIDDSSVVRSVESA----EQIGL 618

Query: 1182 ---EEQASVSEHSLPGVGNKXXXXXXEFKGTNQIGLNGEDL-----LFVDTMSVKAKSYT 1027
               +E  S  E S             E + T + GLN E        F++   + +   +
Sbjct: 619  PFRQELLSPCEVS-----------DFETRETCKAGLNQEKTADSTSAFINDPEIGS---S 664

Query: 1026 GRLLGWTKGAVDIDQELNKPCNHTAGI 946
             R+L W     ++DQE+ K CN TA +
Sbjct: 665  RRILNWKGVGAEVDQEVVKACNQTAAV 691



 Score = 24.3 bits (51), Expect(2) = e-177
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 943 ECVYKSSSSTWNLNCKVS 890
           E V+ SSS+  NLNCK S
Sbjct: 695 ESVFGSSSNAQNLNCKGS 712


>gb|KJB07462.1| hypothetical protein B456_001G025900 [Gossypium raimondii]
          Length = 760

 Score =  630 bits (1624), Expect(2) = e-177
 Identities = 328/507 (64%), Positives = 372/507 (73%), Gaps = 8/507 (1%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNV+HFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+A+
Sbjct: 206  RVADQILKLVPNVKHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAV 265

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 266  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 325

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVS+STLRVMMEQF   NRI E+IELNKAQWS LFEP+ FFEAYKNYLQVDI++ADA
Sbjct: 326  SSYNVSLSTLRVMMEQFQFGNRICEEIELNKAQWSALFEPHLFFEAYKNYLQVDIVSADA 385

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 386  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 445

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             G EGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG++R R LRH
Sbjct: 446  SGLEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYRRPRSLRH 505

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
             S    K+CE+ +  +SGSAE+  KRK D ET+D K  +PEK+A I              
Sbjct: 506  PSQQTGKTCEDVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIIT 565

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMRSSGHLDSEKCTLANDVEMVNTMHESINL 1183
              S  TSH S    V VE    VD DS   +R    LD +  ++   VE      E I L
Sbjct: 566  SKSVGTSHNSNGQAVKVEHRGTVDLDS---LRGQTSLDIDDSSVVRSVESA----EQIGL 618

Query: 1182 ---EEQASVSEHSLPGVGNKXXXXXXEFKGTNQIGLNGEDL-----LFVDTMSVKAKSYT 1027
               +E  S  E S             E + T + GLN E        F++   + +   +
Sbjct: 619  PFRQELLSPCEVS-----------DFETRETCKAGLNQEKTADSTSAFINDPEIGS---S 664

Query: 1026 GRLLGWTKGAVDIDQELNKPCNHTAGI 946
             R+L W     ++DQE+ K CN TA +
Sbjct: 665  RRILNWKGVGAEVDQEVVKACNQTAAV 691



 Score = 24.3 bits (51), Expect(2) = e-177
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 943 ECVYKSSSSTWNLNCKVS 890
           E V+ SSS+  NLNCK S
Sbjct: 695 ESVFGSSSNAQNLNCKGS 712


>gb|KJB07467.1| hypothetical protein B456_001G025900 [Gossypium raimondii]
          Length = 687

 Score =  630 bits (1624), Expect(2) = e-177
 Identities = 328/507 (64%), Positives = 372/507 (73%), Gaps = 8/507 (1%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNV+HFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+A+
Sbjct: 118  RVADQILKLVPNVKHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAV 177

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 178  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 237

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVS+STLRVMMEQF   NRI E+IELNKAQWS LFEP+ FFEAYKNYLQVDI++ADA
Sbjct: 238  SSYNVSLSTLRVMMEQFQFGNRICEEIELNKAQWSALFEPHLFFEAYKNYLQVDIVSADA 297

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 298  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 357

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             G EGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG++R R LRH
Sbjct: 358  SGLEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYRRPRSLRH 417

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
             S    K+CE+ +  +SGSAE+  KRK D ET+D K  +PEK+A I              
Sbjct: 418  PSQQTGKTCEDVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIIT 477

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMRSSGHLDSEKCTLANDVEMVNTMHESINL 1183
              S  TSH S    V VE    VD DS   +R    LD +  ++   VE      E I L
Sbjct: 478  SKSVGTSHNSNGQAVKVEHRGTVDLDS---LRGQTSLDIDDSSVVRSVESA----EQIGL 530

Query: 1182 ---EEQASVSEHSLPGVGNKXXXXXXEFKGTNQIGLNGEDL-----LFVDTMSVKAKSYT 1027
               +E  S  E S             E + T + GLN E        F++   + +   +
Sbjct: 531  PFRQELLSPCEVS-----------DFETRETCKAGLNQEKTADSTSAFINDPEIGS---S 576

Query: 1026 GRLLGWTKGAVDIDQELNKPCNHTAGI 946
             R+L W     ++DQE+ K CN TA +
Sbjct: 577  RRILNWKGVGAEVDQEVVKACNQTAAV 603



 Score = 24.3 bits (51), Expect(2) = e-177
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 943 ECVYKSSSSTWNLNCKVS 890
           E V+ SSS+  NLNCK S
Sbjct: 607 ESVFGSSSNAQNLNCKGS 624


>gb|KJB07468.1| hypothetical protein B456_001G025900 [Gossypium raimondii]
          Length = 635

 Score =  630 bits (1624), Expect(2) = e-177
 Identities = 328/507 (64%), Positives = 372/507 (73%), Gaps = 8/507 (1%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNV+HFR TLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP+A+
Sbjct: 66   RVADQILKLVPNVKHFRMTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAV 125

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 126  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRDRFHHMPIITPAYPCMN 185

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVS+STLRVMMEQF   NRI E+IELNKAQWS LFEP+ FFEAYKNYLQVDI++ADA
Sbjct: 186  SSYNVSLSTLRVMMEQFQFGNRICEEIELNKAQWSALFEPHLFFEAYKNYLQVDIVSADA 245

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNGMLQCHPYP+EY DTSK  P+ AFF+GLQRKEGV
Sbjct: 246  DDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGV 305

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             G EGQQFDIRGTVDEFRQEI+MYM+WKPGMDIYVSHVRR+QLPAF+FPDG++R R LRH
Sbjct: 306  SGLEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYRRPRSLRH 365

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
             S    K+CE+ +  +SGSAE+  KRK D ET+D K  +PEK+A I              
Sbjct: 366  PSQQTGKTCEDVTTSRSGSAERQIKRKRDDETVDEKLNKPEKRASISPLRMESVSPDIIT 425

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMRSSGHLDSEKCTLANDVEMVNTMHESINL 1183
              S  TSH S    V VE    VD DS   +R    LD +  ++   VE      E I L
Sbjct: 426  SKSVGTSHNSNGQAVKVEHRGTVDLDS---LRGQTSLDIDDSSVVRSVESA----EQIGL 478

Query: 1182 ---EEQASVSEHSLPGVGNKXXXXXXEFKGTNQIGLNGEDL-----LFVDTMSVKAKSYT 1027
               +E  S  E S             E + T + GLN E        F++   + +   +
Sbjct: 479  PFRQELLSPCEVS-----------DFETRETCKAGLNQEKTADSTSAFINDPEIGS---S 524

Query: 1026 GRLLGWTKGAVDIDQELNKPCNHTAGI 946
             R+L W     ++DQE+ K CN TA +
Sbjct: 525  RRILNWKGVGAEVDQEVVKACNQTAAV 551



 Score = 24.3 bits (51), Expect(2) = e-177
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 943 ECVYKSSSSTWNLNCKVS 890
           E V+ SSS+  NLNCK S
Sbjct: 555 ESVFGSSSNAQNLNCKGS 572


>ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
            gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta,
            putative [Ricinus communis]
          Length = 754

 Score =  629 bits (1623), Expect = e-177
 Identities = 307/433 (70%), Positives = 351/433 (81%), Gaps = 1/433 (0%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR+CQLYP+AI
Sbjct: 213  RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARLCQLYPNAI 272

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLC+IEE+ELGFPVWDPRRNPRDRFHHMPIITPAYPCMN
Sbjct: 273  PSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 332

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVSISTLRVMMEQF + N+I E+IELNKAQWS LFEPY FFEAYKNYLQ+DIIAADA
Sbjct: 333  SSYNVSISTLRVMMEQFQYGNKICEEIELNKAQWSALFEPYLFFEAYKNYLQIDIIAADA 392

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDT GMLQCHPYP+EY DTSK CP+ AFF+GLQR++GV
Sbjct: 393  DDLLAWKGWVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTSKQCPHCAFFMGLQRRKGV 452

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             GQEGQQFDIRGTV+EFRQEINMYMFWKPGMD+YVSH RR+QLPAF+FPDG+KRSR  RH
Sbjct: 453  SGQEGQQFDIRGTVEEFRQEINMYMFWKPGMDVYVSHARRRQLPAFVFPDGYKRSRTSRH 512

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
             +  A K  + ++  ++GS E + KRK D E +D++  +PEK+A +              
Sbjct: 513  PNQQAGKPSDVSATSRAGSVEGHLKRKNDHEVVDVRPDKPEKRASVSPQRLQSVSPESNT 572

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMR-SSGHLDSEKCTLANDVEMVNTMHESIN 1186
              SG TS  SF + V +ES T+ D DS+SE +   GH D+ K T    V++  T++    
Sbjct: 573  ISSGRTSLVSFCEGVPLESSTVADVDSNSEGKLDRGHSDNGKVTFRGVVQVTETINHDPR 632

Query: 1185 LEEQASVSEHSLP 1147
            +  Q S+    +P
Sbjct: 633  ISAQTSMDLDDIP 645


>gb|KDP34179.1| hypothetical protein JCGZ_07750 [Jatropha curcas]
          Length = 745

 Score =  629 bits (1622), Expect = e-177
 Identities = 321/513 (62%), Positives = 379/513 (73%), Gaps = 16/513 (3%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR+CQLYP+AI
Sbjct: 207  RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARLCQLYPNAI 266

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPVMLCSIEE+ELGFPVWDPR+N RDRFHHMPIITPAYPCMN
Sbjct: 267  PSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPVWDPRKNHRDRFHHMPIITPAYPCMN 326

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVSISTLRVMMEQF + N+I E+IELNKAQWS LFEPY FFEAYKNYLQ+DIIAADA
Sbjct: 327  SSYNVSISTLRVMMEQFQYGNKICEEIELNKAQWSALFEPYLFFEAYKNYLQIDIIAADA 386

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESRLRQLTLKIERDTNG+LQCHPYP+EY DTSK C + AFF+GLQR+EGV
Sbjct: 387  DDLLAWKGWVESRLRQLTLKIERDTNGVLQCHPYPNEYVDTSKQCSHCAFFMGLQRREGV 446

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
             GQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRR+QLPAF+FPDG+KRSR  RH
Sbjct: 447  TGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRRQLPAFVFPDGYKRSRPSRH 506

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
            ++    KS + A+  + GS E + KRK D E +DL+  +PEK+A I              
Sbjct: 507  LNQQVSKSNDGAATSRIGSPEGHLKRKNDHEEVDLRPDKPEKRASISPQRLQSVSPESST 566

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMRS-SGHLDSEKCTLANDVEMVNTMH---- 1198
               G TS  +F++R+ +   T  D D++SE RS  G   +E C L N +++  T+     
Sbjct: 567  SRCGGTSLANFSERIKLGCSTAADVDNNSEARSCRGPSSNENCILGNVMQVGETVMGLYD 626

Query: 1197 --------ESINLEEQASVSEHSLPGVGNKXXXXXXEFKGT--NQIGLNGEDLLFVDTMS 1048
                    E      +   ++ ++  +  +      E   +   +I     +    D +S
Sbjct: 627  PAVVRGDVEPAECRNEVEPTDLAVETILKQELLDPYEISSSEIRKIHNVTNENRNGDLIS 686

Query: 1047 VKAKSYT-GRLLGWTKGAVDIDQELNKPCNHTA 952
               ++ +  RLL W    +++++EL +PCN TA
Sbjct: 687  ASLENGSPNRLLKWGGEVIEVEEELVRPCNQTA 719


>ref|XP_007224438.1| hypothetical protein PRUPE_ppa021844mg, partial [Prunus persica]
            gi|462421374|gb|EMJ25637.1| hypothetical protein
            PRUPE_ppa021844mg, partial [Prunus persica]
          Length = 676

 Score =  629 bits (1622), Expect = e-177
 Identities = 311/438 (71%), Positives = 347/438 (79%), Gaps = 1/438 (0%)
 Frame = -3

Query: 2442 RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPSAI 2263
            RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWA+LVAR+CQLYP+AI
Sbjct: 204  RVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARICQLYPNAI 263

Query: 2262 PSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHHMPIITPAYPCMN 2083
            PSMLVSRFFRVYTQWRWPNPV LCSIEENELGFP WDPR+NPRDRFHHMPIITPAYPCMN
Sbjct: 264  PSMLVSRFFRVYTQWRWPNPVTLCSIEENELGFPTWDPRKNPRDRFHHMPIITPAYPCMN 323

Query: 2082 SSYNVSISTLRVMMEQFNHANRITEDIELNKAQWSCLFEPYRFFEAYKNYLQVDIIAADA 1903
            SSYNVSISTLRVM EQF+H N+I E+IELNK QWS LFEPY FFEAYKNYLQVDI+AAD+
Sbjct: 324  SSYNVSISTLRVMTEQFHHGNKICEEIELNKTQWSALFEPYLFFEAYKNYLQVDIVAADS 383

Query: 1902 VDLLTWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYADTSKPCPNFAFFLGLQRKEGV 1723
             DLL WKGWVESR RQLTLKIERDTNGMLQCHPYP EY DTSKPCP+ AFF+GLQRKEGV
Sbjct: 384  DDLLAWKGWVESRFRQLTLKIERDTNGMLQCHPYPKEYVDTSKPCPHCAFFMGLQRKEGV 443

Query: 1722 RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVSHVRRKQLPAFLFPDGHKRSRMLRH 1543
            RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYV HVRRKQLP F+FPDG+KR R LRH
Sbjct: 444  RGQEGQQFDIRGTVDEFRQEINMYMFWKPGMDIYVCHVRRKQLPPFVFPDGYKRPRPLRH 503

Query: 1542 VSLDAEKSCEEASGFQSGSAEKNAKRKADSETMDLKSTRPEKQAFIXXXXXXXXXXXXXX 1363
             S   E++ E+A G  SGSAE++ KRK D +T D+   +  KQ  I              
Sbjct: 504  ASQQDERNYEDAVGSGSGSAERHIKRKIDPKTEDVGPIKRVKQTAISPPRTESVSPSKNA 563

Query: 1362 XXSGITSHTSFNDRVIVESLTMVDRDSSSEMR-SSGHLDSEKCTLANDVEMVNTMHESIN 1186
              SG T   SF++   +E     D D +S++R     L+SEK ++ +   + + MHESI 
Sbjct: 564  GRSGGTPDISFSNGNRLECRATGDADKNSDVRLPVRQLESEKDSVGDMRVVEDVMHESIT 623

Query: 1185 LEEQASVSEHSLPGVGNK 1132
              E  S+     P + N+
Sbjct: 624  RNECTSMLVSEFPRIRNE 641