BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00005309
         (3355 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III s...  1740   0.0  
ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s...  1739   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1739   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1736   0.0  
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...  1721   0.0  
ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theob...  1707   0.0  
ref|XP_004141655.2| PREDICTED: DNA-directed RNA polymerase III s...  1707   0.0  
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...  1706   0.0  
ref|XP_008462447.1| PREDICTED: DNA-directed RNA polymerase III s...  1706   0.0  
ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III s...  1699   0.0  
ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III s...  1688   0.0  
ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III s...  1684   0.0  
ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III s...  1684   0.0  
ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III s...  1684   0.0  
ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III s...  1682   0.0  
gb|KJB75029.1| hypothetical protein B456_012G019600 [Gossypium r...  1680   0.0  
ref|XP_012068721.1| PREDICTED: DNA-directed RNA polymerase III s...  1679   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...  1678   0.0  
ref|XP_009758465.1| PREDICTED: DNA-directed RNA polymerase III s...  1677   0.0  
ref|XP_010536382.1| PREDICTED: DNA-directed RNA polymerase III s...  1677   0.0  

>ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera] gi|731414225|ref|XP_010659065.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1157

 Score = 1740 bits (4507), Expect = 0.0
 Identities = 855/1021 (83%), Positives = 940/1021 (92%), Gaps = 3/1021 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K +VVIGRMPIMLRSCCCVLY KDEAELARLGECPLDPGGYF++KGTEKVILIQEQLSK
Sbjct: 143  EKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 202

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGME 2995
            NRIIID DKKGNINASV            I MEK K++L L+QF++K+PIM+VMKAMGME
Sbjct: 203  NRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGME 262

Query: 2994 SDQEVVQMVGRDPRYSALLMPSIEECGKD-IHTKEQALDYLESKLKRSMYPPSAHAPNAS 2818
            SDQEVVQMVGR+PRYSALL+PS+EEC    I+T++QAL++LE K+K+  +       N S
Sbjct: 263  SDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFY------NPS 316

Query: 2817 SEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKR 2638
             EK GR M IL+D F+ANV V QNNFRPKC+YV VMLRR+MDAILNKDA+DDKDYVGNKR
Sbjct: 317  LEKEGRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKR 376

Query: 2637 LELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERALS 2458
            LELSGQLISLLFEDLFKTMI++VK+T+D+ILAKPSRSSRFDF+Q+IVRD+IT GLER LS
Sbjct: 377  LELSGQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQFIVRDSITVGLERTLS 436

Query: 2457 TGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGMLC 2278
            TGNWDVKRF+M++KG++QV+ RLS+IG+LGHMT+I+PQFEKSRKVSGPRALQPSQWGMLC
Sbjct: 437  TGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLC 496

Query: 2277 PCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLVI 2098
            PCDTPEGEACGLVKNLALMTHVTTDEEE PLISL Y LGVEDLELLSGEELH PNSFL+I
Sbjct: 497  PCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLII 556

Query: 2097 FNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIAD 1918
            FNG ILGKHRRPQRFA A+R LRRAGKIGEFVSVF+NEKQ CVYIASDGGRVCRP+VIAD
Sbjct: 557  FNGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIAD 616

Query: 1917 KGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEIE 1738
            KG SRIKEHHMKEL+DGVRTFDDFLR+GLIEYLDVNEENNALIALYEADA PETTHIEIE
Sbjct: 617  KGKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIE 676

Query: 1737 PFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPLL 1558
            PFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+LLYLLVYPQ+PLL
Sbjct: 677  PFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLL 736

Query: 1557 TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAIIQ 1378
            TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMK+ SA+ Q
Sbjct: 737  TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQ 796

Query: 1377 KYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMVT- 1201
            +YENN  DRI RP + G+DA RMQ+LDDDG+AAPGEII+PNDIYINK++P +T+G +++ 
Sbjct: 797  RYENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISP 856

Query: 1200 -GLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRH 1024
             GL DS +K + QTFKGP GE+SVVD+VAL +DKN+N+CIK+LIRHTRRPEVGDKFSSRH
Sbjct: 857  VGLPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRH 916

Query: 1023 GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 844
            GQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG
Sbjct: 917  GQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 976

Query: 843  SAFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 664
            SAFGEPSGHAD VE IS TLV+ GFSY+GKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV
Sbjct: 977  SAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 1036

Query: 663  LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFE 484
            LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLM+SSDPFE
Sbjct: 1037 LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFE 1096

Query: 483  VQVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAE 304
            VQVCR CGLLGYYNHKLK GICS+CKNGDNISTMKLPYACKLL QELQ+MN+VPRLKL E
Sbjct: 1097 VQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTE 1156

Query: 303  A 301
            A
Sbjct: 1157 A 1157


>ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X3 [Citrus sinensis]
          Length = 1058

 Score = 1739 bits (4505), Expect = 0.0
 Identities = 862/1021 (84%), Positives = 941/1021 (92%), Gaps = 3/1021 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K +VVIGR+PIMLRSC CVLYGKDEAELARLGECPLDPGGYFIIKGTEKV+LIQEQLSK
Sbjct: 44   EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 103

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGME 2995
            NR+IID DKKGNINASV            IQMEKGK+YL+L+QF  K+PIMVVMKAMG+E
Sbjct: 104  NRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIE 163

Query: 2994 SDQEVVQMVGRDPRYSALLMPSIEECGK-DIHTKEQALDYLESKLKRSMYPPSAHAPNAS 2818
            SDQEVVQMVGRDPRYSALL+PSIEEC   DI+T+E+AL+YLE K+KRS +      PN  
Sbjct: 164  SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTF---GSPPN-- 218

Query: 2817 SEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKR 2638
             ++ GR  +IL+DVFLANV VH NNFRPKC YV VMLRR+++A+LNKDA+DDKDYVGNKR
Sbjct: 219  -DREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKR 277

Query: 2637 LELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERALS 2458
            LELSGQL+SLLFEDLFKTMI++V++TVD IL+KPSRSSRFD +Q+IVRD+IT GLER LS
Sbjct: 278  LELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLS 337

Query: 2457 TGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGMLC 2278
            TGN+DVKRFKM++KG+TQVL RLSFIGTLGHMTR++PQFEKSRKVSGPRALQPSQWGMLC
Sbjct: 338  TGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLC 397

Query: 2277 PCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLVI 2098
            PCDTPEGEACGLVKNLALMTHVTTDEEE PLISL YCLGVEDLELLSGEELH PNSFLVI
Sbjct: 398  PCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVI 457

Query: 2097 FNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIAD 1918
            FNG ILGKHRRP+ FA  +R LRRAGKIGEFVSVF+NEKQRCVYIASDGGRVCRPLVIAD
Sbjct: 458  FNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIAD 517

Query: 1917 KGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEIE 1738
            KGISRIKEHHMKELLDGVR+FDDFLREGLIEYLDVNEENNALIALYE DATP+TTHIEIE
Sbjct: 518  KGISRIKEHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIE 577

Query: 1737 PFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPLL 1558
            PFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+LLYLLVYPQ+PLL
Sbjct: 578  PFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLL 637

Query: 1557 TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAIIQ 1378
            TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+K+ +AI Q
Sbjct: 638  TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQ 697

Query: 1377 KYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMV-- 1204
            KY N+T DRI RP+R G  A RMQ+LDDDG+AAPGEII+PND+YINK++P  TRG+++  
Sbjct: 698  KYANSTSDRILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSP 757

Query: 1203 TGLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRH 1024
            TG TDS ++ A QT+KGP GE+ VVD+VAL +DKN ++CIK+LIRHTRRPE+GDKFSSRH
Sbjct: 758  TGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRH 817

Query: 1023 GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 844
            GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG
Sbjct: 818  GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 877

Query: 843  SAFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 664
            SAFGEPSGHADTVE+IS TLV+ GFSYNGKD IYSGITGCPLQAYIFMGPIYYQKLKHMV
Sbjct: 878  SAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMV 937

Query: 663  LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFE 484
            LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLM+SSDPFE
Sbjct: 938  LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFE 997

Query: 483  VQVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAE 304
            VQVCR CGLLGYYNHKLK GICS+CKNGDNIS+MKLPYACKLLIQELQSMNIVPRLKLAE
Sbjct: 998  VQVCRVCGLLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAE 1057

Query: 303  A 301
            A
Sbjct: 1058 A 1058


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Citrus sinensis]
          Length = 1149

 Score = 1739 bits (4505), Expect = 0.0
 Identities = 862/1021 (84%), Positives = 941/1021 (92%), Gaps = 3/1021 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K +VVIGR+PIMLRSC CVLYGKDEAELARLGECPLDPGGYFIIKGTEKV+LIQEQLSK
Sbjct: 135  EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 194

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGME 2995
            NR+IID DKKGNINASV            IQMEKGK+YL+L+QF  K+PIMVVMKAMG+E
Sbjct: 195  NRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIE 254

Query: 2994 SDQEVVQMVGRDPRYSALLMPSIEECGK-DIHTKEQALDYLESKLKRSMYPPSAHAPNAS 2818
            SDQEVVQMVGRDPRYSALL+PSIEEC   DI+T+E+AL+YLE K+KRS +      PN  
Sbjct: 255  SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTF---GSPPN-- 309

Query: 2817 SEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKR 2638
             ++ GR  +IL+DVFLANV VH NNFRPKC YV VMLRR+++A+LNKDA+DDKDYVGNKR
Sbjct: 310  -DREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKR 368

Query: 2637 LELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERALS 2458
            LELSGQL+SLLFEDLFKTMI++V++TVD IL+KPSRSSRFD +Q+IVRD+IT GLER LS
Sbjct: 369  LELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLS 428

Query: 2457 TGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGMLC 2278
            TGN+DVKRFKM++KG+TQVL RLSFIGTLGHMTR++PQFEKSRKVSGPRALQPSQWGMLC
Sbjct: 429  TGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLC 488

Query: 2277 PCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLVI 2098
            PCDTPEGEACGLVKNLALMTHVTTDEEE PLISL YCLGVEDLELLSGEELH PNSFLVI
Sbjct: 489  PCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVI 548

Query: 2097 FNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIAD 1918
            FNG ILGKHRRP+ FA  +R LRRAGKIGEFVSVF+NEKQRCVYIASDGGRVCRPLVIAD
Sbjct: 549  FNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIAD 608

Query: 1917 KGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEIE 1738
            KGISRIKEHHMKELLDGVR+FDDFLREGLIEYLDVNEENNALIALYE DATP+TTHIEIE
Sbjct: 609  KGISRIKEHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIE 668

Query: 1737 PFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPLL 1558
            PFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+LLYLLVYPQ+PLL
Sbjct: 669  PFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLL 728

Query: 1557 TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAIIQ 1378
            TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+K+ +AI Q
Sbjct: 729  TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQ 788

Query: 1377 KYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMV-- 1204
            KY N+T DRI RP+R G  A RMQ+LDDDG+AAPGEII+PND+YINK++P  TRG+++  
Sbjct: 789  KYANSTSDRILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSP 848

Query: 1203 TGLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRH 1024
            TG TDS ++ A QT+KGP GE+ VVD+VAL +DKN ++CIK+LIRHTRRPE+GDKFSSRH
Sbjct: 849  TGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRH 908

Query: 1023 GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 844
            GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG
Sbjct: 909  GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 968

Query: 843  SAFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 664
            SAFGEPSGHADTVE+IS TLV+ GFSYNGKD IYSGITGCPLQAYIFMGPIYYQKLKHMV
Sbjct: 969  SAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMV 1028

Query: 663  LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFE 484
            LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLM+SSDPFE
Sbjct: 1029 LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFE 1088

Query: 483  VQVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAE 304
            VQVCR CGLLGYYNHKLK GICS+CKNGDNIS+MKLPYACKLLIQELQSMNIVPRLKLAE
Sbjct: 1089 VQVCRVCGLLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAE 1148

Query: 303  A 301
            A
Sbjct: 1149 A 1149


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1736 bits (4495), Expect = 0.0
 Identities = 860/1021 (84%), Positives = 940/1021 (92%), Gaps = 3/1021 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K +VVIGR+PIMLRSC CVLYGKDEAELARLGECPLDPGGYFIIKGTEKV+LIQEQLSK
Sbjct: 135  EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 194

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGME 2995
            NR+IID DKKGNINASV            IQMEKGK+YL+L+QF  K+PIMVVMKAMGME
Sbjct: 195  NRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGME 254

Query: 2994 SDQEVVQMVGRDPRYSALLMPSIEECGK-DIHTKEQALDYLESKLKRSMYPPSAHAPNAS 2818
            SDQEVVQMVGRDPRYSALL+PSIEEC   DI+T+E+AL+YLE K+KRS +      PN  
Sbjct: 255  SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTF---GSPPN-- 309

Query: 2817 SEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKR 2638
             ++ GR  +IL+DVFLANV VH NNFRPKC YV VMLRR+++A+LNKDA+DDKDYVGNKR
Sbjct: 310  -DREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKR 368

Query: 2637 LELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERALS 2458
            LELSGQL+SLLFEDLFKTMI++V++TVD IL+KPSRSSRFD +Q+IVRD+IT GLER LS
Sbjct: 369  LELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLS 428

Query: 2457 TGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGMLC 2278
            TGN+DVKRFKM++KG+TQVL RLSFIGTLGHMTR++PQFEKSRKVSGPRALQPSQWGMLC
Sbjct: 429  TGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLC 488

Query: 2277 PCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLVI 2098
            PCDTPEGEACGLVKNLALMTHVTTDEEE PLISL YCLGVEDLELLSGEELH PNSFLVI
Sbjct: 489  PCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVI 548

Query: 2097 FNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIAD 1918
            FNG ILGKHRRP+ FA  +R LRRAGKIGEFVSVF+NEKQRCVYIASDGGRVCRPLVIAD
Sbjct: 549  FNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIAD 608

Query: 1917 KGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEIE 1738
            KGISRIKEHHMKEL DGVR+FDDFLREGLIEYLDVNEENNALIALYE DATP+TTHIEIE
Sbjct: 609  KGISRIKEHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIE 668

Query: 1737 PFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPLL 1558
            PFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+LLYLLVYPQ+PLL
Sbjct: 669  PFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLL 728

Query: 1557 TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAIIQ 1378
            TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+K+ +AI Q
Sbjct: 729  TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQ 788

Query: 1377 KYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMV-- 1204
            KY N+T DRI RP+R G  + RMQ+LDDDG+AAPGEII+PND+YINK++P  TRG+++  
Sbjct: 789  KYANSTSDRILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSP 848

Query: 1203 TGLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRH 1024
            TG TDS ++ A QT+KGP GE+ VVD+VAL +DKN ++CIK+LIRHTRRPE+GDKFSSRH
Sbjct: 849  TGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRH 908

Query: 1023 GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 844
            GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG
Sbjct: 909  GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 968

Query: 843  SAFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 664
            SAFGEPSGHADTVE+IS TLV+ GFSYNGKD IYSGITGCPLQAYIFMGPIYYQKLKHMV
Sbjct: 969  SAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMV 1028

Query: 663  LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFE 484
            LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLM+SSDPFE
Sbjct: 1029 LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFE 1088

Query: 483  VQVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAE 304
            VQVCR CGLLGYYNHKLK GICS+CKNG+NIS+MKLPYACKLLIQELQSMNIVPRLKLAE
Sbjct: 1089 VQVCRVCGLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIVPRLKLAE 1148

Query: 303  A 301
            A
Sbjct: 1149 A 1149


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1721 bits (4456), Expect = 0.0
 Identities = 855/1022 (83%), Positives = 930/1022 (90%), Gaps = 4/1022 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K ++VIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYF+IKG EKVILIQEQLSK
Sbjct: 143  EKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSK 202

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGME 2995
            NRIIID DKKGNINASV            IQMEK K+YL+L+QF  K+PIMVVMKAMGME
Sbjct: 203  NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 262

Query: 2994 SDQEVVQMVGRDPRYSALLMPSIEEC-GKDIHTKEQALDYLESKLKRSMYPPSAHAPNAS 2818
            SDQEVVQMVGRDP Y+A+L+PSIEEC G  I+T+EQAL+YLE+K+KR MY   A      
Sbjct: 263  SDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPA------ 316

Query: 2817 SEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKR 2638
            SEK GR ++IL+DVFLANV V  NNFRPKC+YV VMLRR+++AILNKDA+DDKDYVGNKR
Sbjct: 317  SEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKR 376

Query: 2637 LELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWI-VRDNITNGLERAL 2461
            LELSGQLISLLFEDLFKT I++V++ +D +L+KPSRSS  D +Q++  R+ IT GLER L
Sbjct: 377  LELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTL 436

Query: 2460 STGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGML 2281
            STGN+D+KRFKM++KG+TQVL RLSFIGTLG+MT+++PQFEKSRKVSGPRALQPSQWGML
Sbjct: 437  STGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGML 496

Query: 2280 CPCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLV 2101
            CPCDTPEGEACGLVKNLALMTHVTTDE+E PLISL YCLGVEDLELLSGEELH PNSFLV
Sbjct: 497  CPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLV 556

Query: 2100 IFNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIA 1921
            I NG ILGKHRRPQ FA A+R LRRAGK+GEFVSVF+NEKQRCVYIASDGGRVCRPLVIA
Sbjct: 557  ILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIA 616

Query: 1920 DKGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEI 1741
            DKG+SRIKEHHMKELLDGVRTFDDFLR+GLIEYLDVNEENNALIALYE +ATPETTHIEI
Sbjct: 617  DKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEI 676

Query: 1740 EPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPL 1561
            EPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQ+PL
Sbjct: 677  EPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPL 736

Query: 1560 LTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAII 1381
            LTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKR SA+ 
Sbjct: 737  LTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVN 796

Query: 1380 QKYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMVT 1201
            QKYE    DRI RP R G  + RMQ+LDDDGIA PGEIIRPNDIYINK++   TRG+ V+
Sbjct: 797  QKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTRGSRVS 856

Query: 1200 --GLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSR 1027
               L DS ++ A QT+KGP GES VVD+VAL TD+N+N+ IK+LIRHTRRPEVGDKFSSR
Sbjct: 857  SESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSR 916

Query: 1026 HGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHY 847
            HGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHY
Sbjct: 917  HGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHY 976

Query: 846  GSAFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM 667
            GSAFGEPSGHAD VEAIS TL++ GFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM
Sbjct: 977  GSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM 1036

Query: 666  VLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPF 487
            VLDKMHARG+GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPF
Sbjct: 1037 VLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPF 1096

Query: 486  EVQVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLA 307
            EVQVCR CGLLGYY+HKLKTGICSSCKNGDN+STMKLPYACKLLIQELQSMNIVPRLKL+
Sbjct: 1097 EVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLS 1156

Query: 306  EA 301
            EA
Sbjct: 1157 EA 1158


>ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao]
            gi|508727718|gb|EOY19615.1| DNA-directed RNA polymerase
            isoform 7 [Theobroma cacao]
          Length = 1082

 Score = 1707 bits (4422), Expect = 0.0
 Identities = 855/1045 (81%), Positives = 930/1045 (88%), Gaps = 27/1045 (2%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K ++VIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYF+IKG EKVILIQEQLSK
Sbjct: 44   EKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSK 103

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGME 2995
            NRIIID DKKGNINASV            IQMEK K+YL+L+QF  K+PIMVVMKAMGME
Sbjct: 104  NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 163

Query: 2994 SDQEVVQMVGRDPRYSALLMPSIEEC-GKDIHTKEQALDYLESKLKRSMYPPSAHAPNAS 2818
            SDQEVVQMVGRDP Y+A+L+PSIEEC G  I+T+EQAL+YLE+K+KR MY   A      
Sbjct: 164  SDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPA------ 217

Query: 2817 SEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKR 2638
            SEK GR ++IL+DVFLANV V  NNFRPKC+YV VMLRR+++AILNKDA+DDKDYVGNKR
Sbjct: 218  SEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKR 277

Query: 2637 LELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWI-VRDNITNGLERAL 2461
            LELSGQLISLLFEDLFKT I++V++ +D +L+KPSRSS  D +Q++  R+ IT GLER L
Sbjct: 278  LELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTL 337

Query: 2460 STGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGML 2281
            STGN+D+KRFKM++KG+TQVL RLSFIGTLG+MT+++PQFEKSRKVSGPRALQPSQWGML
Sbjct: 338  STGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGML 397

Query: 2280 CPCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLV 2101
            CPCDTPEGEACGLVKNLALMTHVTTDE+E PLISL YCLGVEDLELLSGEELH PNSFLV
Sbjct: 398  CPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLV 457

Query: 2100 IFNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIA 1921
            I NG ILGKHRRPQ FA A+R LRRAGK+GEFVSVF+NEKQRCVYIASDGGRVCRPLVIA
Sbjct: 458  ILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIA 517

Query: 1920 DKGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEI 1741
            DKG+SRIKEHHMKELLDGVRTFDDFLR+GLIEYLDVNEENNALIALYE +ATPETTHIEI
Sbjct: 518  DKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEI 577

Query: 1740 EPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPL 1561
            EPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQ+PL
Sbjct: 578  EPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPL 637

Query: 1560 LTTRTIEL-----------------------VGYDKLGAGQNATVAVMSYSGYDIEDAIV 1450
            LTTRTIEL                       VGYDKLGAGQNATVAVMSYSGYDIEDAIV
Sbjct: 638  LTTRTIELVSGLYVVDYSTPFCPVNCLLCFQVGYDKLGAGQNATVAVMSYSGYDIEDAIV 697

Query: 1449 MNKASLDRGFGRCIVMKRLSAIIQKYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGE 1270
            MNK+SLDRGFGRCIVMKR SA+ QKYE    DRI RP R G  + RMQ+LDDDGIA PGE
Sbjct: 698  MNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGE 757

Query: 1269 IIRPNDIYINKQTPRVTRGTMVT--GLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNN 1096
            IIRPNDIYINK++   TRG+ V+   L DS ++ A QT+KGP GES VVD+VAL TD+N+
Sbjct: 758  IIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNS 817

Query: 1095 NMCIKYLIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSR 916
            N+ IK+LIRHTRRPEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSR
Sbjct: 818  NLSIKFLIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSR 877

Query: 915  MTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSG 736
            MTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHAD VEAIS TL++ GFSYNGKDFIYSG
Sbjct: 878  MTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSG 937

Query: 735  ITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMER 556
            ITGCPLQAYIFMGPIYYQKLKHMVLDKMHARG+GPRVMLTRQPTEGRARNGGLRVGEMER
Sbjct: 938  ITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMER 997

Query: 555  DCLIAYGASMLIFERLMISSDPFEVQVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKL 376
            DCLIAYGASMLIFERLMISSDPFEVQVCR CGLLGYY+HKLKTGICSSCKNGDN+STMKL
Sbjct: 998  DCLIAYGASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKL 1057

Query: 375  PYACKLLIQELQSMNIVPRLKLAEA 301
            PYACKLLIQELQSMNIVPRLKL+EA
Sbjct: 1058 PYACKLLIQELQSMNIVPRLKLSEA 1082


>ref|XP_004141655.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Cucumis
            sativus]
          Length = 1158

 Score = 1707 bits (4420), Expect = 0.0
 Identities = 843/1020 (82%), Positives = 929/1020 (91%), Gaps = 2/1020 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K++VVIGRMPIMLRS CCVL+GKDEAELARLGECPLDPGGYFIIKGTEKV+LIQEQLSK
Sbjct: 145  EKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQLSK 204

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFST-KVPIMVVMKAMGM 2998
            NRIIID DKKGNINASV            I+ME  K+YL L+ F+T K+PIMVV+KAMGM
Sbjct: 205  NRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMGM 264

Query: 2997 ESDQEVVQMVGRDPRYSALLMPSIEECGKD-IHTKEQALDYLESKLKRSMYPPSAHAPNA 2821
            ES QEVVQMVGRDPRY ALL+PSIEEC K+ I+T+EQAL+YLE+K+K+  +       +A
Sbjct: 265  ESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFA------SA 318

Query: 2820 SSEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNK 2641
              EK GR + IL+DVFLANV V++NNF PKCIYV VM+RR+MDAIL+KDA+DDKDYVGNK
Sbjct: 319  PPEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNK 378

Query: 2640 RLELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERAL 2461
            RLELSGQLISLLFEDLFKTM+++VK+T+D +L K SRSSRFDF+Q +  + I+ GLER L
Sbjct: 379  RLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTL 438

Query: 2460 STGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGML 2281
            STGNWDVKRF+M++KG++QVL RLSFI T+GH+TR++PQFEKSRKVSGPRALQPSQWGML
Sbjct: 439  STGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGML 498

Query: 2280 CPCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLV 2101
            CPCDTPEGEACGLVKNLALMTHVTTD+EE PLISL YCLGVEDLELLS EELH PNSFLV
Sbjct: 499  CPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLV 558

Query: 2100 IFNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIA 1921
            IFNG ILGKHRRPQ FAT +RMLRRAGKIGEFVSVF+NEKQ CVYIASDGGRVCRPLVIA
Sbjct: 559  IFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIA 618

Query: 1920 DKGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEI 1741
            DKG+SRIKE+HMKEL DGVRTFDDFLR+GLIEYLDVNEENNALIALYE +ATPETTHIEI
Sbjct: 619  DKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEI 678

Query: 1740 EPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPL 1561
            EPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQ+PL
Sbjct: 679  EPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPL 738

Query: 1560 LTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAII 1381
            LTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV K+ S++ 
Sbjct: 739  LTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVN 798

Query: 1380 QKYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMVT 1201
            QKYENNT DRI RPNR  +  G MQ+LDDDG+AAPGEIIRPNDIY+NKQ+P +T+G+ + 
Sbjct: 799  QKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPIITKGSPLP 858

Query: 1200 GLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRHG 1021
            G+ D+ ++   Q FKG  GE +VVD+VAL TDKN+ +CIK+LIR TRRPE+GDKFSSRHG
Sbjct: 859  GIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHG 918

Query: 1020 QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 841
            QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS
Sbjct: 919  QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 978

Query: 840  AFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 661
            AFGEPSGHAD V+AIS TL+++GFSYNGKDF+YSGITGCPLQAYIFMGPIYYQKLKHMVL
Sbjct: 979  AFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVL 1038

Query: 660  DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEV 481
            DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLI+ERLMISSDPFEV
Sbjct: 1039 DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEV 1098

Query: 480  QVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 301
            QVCR CGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA
Sbjct: 1099 QVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1153

 Score = 1706 bits (4419), Expect = 0.0
 Identities = 850/1022 (83%), Positives = 925/1022 (90%), Gaps = 4/1022 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K ++VIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYF+IKG EK     EQLSK
Sbjct: 143  EKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEK-----EQLSK 197

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGME 2995
            NRIIID DKKGNINASV            IQMEK K+YL+L+QF  K+PIMVVMKAMGME
Sbjct: 198  NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 257

Query: 2994 SDQEVVQMVGRDPRYSALLMPSIEEC-GKDIHTKEQALDYLESKLKRSMYPPSAHAPNAS 2818
            SDQEVVQMVGRDP Y+A+L+PSIEEC G  I+T+EQAL+YLE+K+KR MY   A      
Sbjct: 258  SDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPA------ 311

Query: 2817 SEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKR 2638
            SEK GR ++IL+DVFLANV V  NNFRPKC+YV VMLRR+++AILNKDA+DDKDYVGNKR
Sbjct: 312  SEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKR 371

Query: 2637 LELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWI-VRDNITNGLERAL 2461
            LELSGQLISLLFEDLFKT I++V++ +D +L+KPSRSS  D +Q++  R+ IT GLER L
Sbjct: 372  LELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTL 431

Query: 2460 STGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGML 2281
            STGN+D+KRFKM++KG+TQVL RLSFIGTLG+MT+++PQFEKSRKVSGPRALQPSQWGML
Sbjct: 432  STGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGML 491

Query: 2280 CPCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLV 2101
            CPCDTPEGEACGLVKNLALMTHVTTDE+E PLISL YCLGVEDLELLSGEELH PNSFLV
Sbjct: 492  CPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLV 551

Query: 2100 IFNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIA 1921
            I NG ILGKHRRPQ FA A+R LRRAGK+GEFVSVF+NEKQRCVYIASDGGRVCRPLVIA
Sbjct: 552  ILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIA 611

Query: 1920 DKGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEI 1741
            DKG+SRIKEHHMKELLDGVRTFDDFLR+GLIEYLDVNEENNALIALYE +ATPETTHIEI
Sbjct: 612  DKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEI 671

Query: 1740 EPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPL 1561
            EPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQ+PL
Sbjct: 672  EPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPL 731

Query: 1560 LTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAII 1381
            LTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKR SA+ 
Sbjct: 732  LTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVN 791

Query: 1380 QKYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMVT 1201
            QKYE    DRI RP R G  + RMQ+LDDDGIA PGEIIRPNDIYINK++   TRG+ V+
Sbjct: 792  QKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTRGSRVS 851

Query: 1200 --GLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSR 1027
               L DS ++ A QT+KGP GES VVD+VAL TD+N+N+ IK+LIRHTRRPEVGDKFSSR
Sbjct: 852  SESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSR 911

Query: 1026 HGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHY 847
            HGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHY
Sbjct: 912  HGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHY 971

Query: 846  GSAFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM 667
            GSAFGEPSGHAD VEAIS TL++ GFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM
Sbjct: 972  GSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM 1031

Query: 666  VLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPF 487
            VLDKMHARG+GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPF
Sbjct: 1032 VLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPF 1091

Query: 486  EVQVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLA 307
            EVQVCR CGLLGYY+HKLKTGICSSCKNGDN+STMKLPYACKLLIQELQSMNIVPRLKL+
Sbjct: 1092 EVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLS 1151

Query: 306  EA 301
            EA
Sbjct: 1152 EA 1153


>ref|XP_008462447.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Cucumis
            melo]
          Length = 1158

 Score = 1706 bits (4417), Expect = 0.0
 Identities = 842/1020 (82%), Positives = 928/1020 (90%), Gaps = 2/1020 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K++VVIGRMPIMLRS CCVL+GKDEAELARLGECPLDPGGYFIIKGTEKV+LIQEQLSK
Sbjct: 145  EKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQLSK 204

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFST-KVPIMVVMKAMGM 2998
            NRIIID DKKGNINASV            I+ME  K+YL L+ F+T K+PIMVV+KAMGM
Sbjct: 205  NRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMGM 264

Query: 2997 ESDQEVVQMVGRDPRYSALLMPSIEECGKD-IHTKEQALDYLESKLKRSMYPPSAHAPNA 2821
            ES QEVVQMVGRDPRY ALL+PSIEEC K+ I+T+EQAL+YLE+K+K+  +       +A
Sbjct: 265  ESVQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFA------SA 318

Query: 2820 SSEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNK 2641
              EK GR + IL+DVFLANV V++NNF PKCIYV VM+RR+MDAIL+KDA+DDKDYVGNK
Sbjct: 319  PPEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNK 378

Query: 2640 RLELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERAL 2461
            RLELSGQLISLLFEDLFKTM+++VK+T+D +L K SRSSRFDF+Q +  + I+ GLER L
Sbjct: 379  RLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTL 438

Query: 2460 STGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGML 2281
            STGNWDVKRF+M++KG++QVL RLSFI T+GH+TR++PQFEKSRKVSGPRALQPSQWGML
Sbjct: 439  STGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGML 498

Query: 2280 CPCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLV 2101
            CPCDTPEGEACGLVKNLALMTHVTTD+EE PLISL YCLGVEDLELLS EELH PNSFLV
Sbjct: 499  CPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLV 558

Query: 2100 IFNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIA 1921
            IFNG ILGKHRRPQ FAT +RMLRRAGKIGEFVSVF+NEKQ CVYIASDGGRVCRPLVIA
Sbjct: 559  IFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIA 618

Query: 1920 DKGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEI 1741
            DKG+SRI+E+HMKEL DGVRTFDDFLR+GLIEYLDVNEENNALIALYE +ATPETTHIEI
Sbjct: 619  DKGVSRIREYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEI 678

Query: 1740 EPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPL 1561
            EP TILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQ+PL
Sbjct: 679  EPLTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPL 738

Query: 1560 LTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAII 1381
            LTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV K+ S++ 
Sbjct: 739  LTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVN 798

Query: 1380 QKYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMVT 1201
            QKYENNT DRI RPNR  +  G MQ+LDDDG+AAPGEIIRPND+Y+NKQ+P +T+G+ + 
Sbjct: 799  QKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDVYVNKQSPIITKGSPLP 858

Query: 1200 GLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRHG 1021
            G+ DS ++   Q FKG  GE +VVD+VAL TDKN+ +CIK+LIR TRRPE+GDKFSSRHG
Sbjct: 859  GIPDSAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHG 918

Query: 1020 QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 841
            QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS
Sbjct: 919  QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 978

Query: 840  AFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 661
            AFGEPSGHAD V+AIS TL+E+GFSYNGKDF+YSGITGCPLQAYIFMGPIYYQKLKHMVL
Sbjct: 979  AFGEPSGHADKVDAISETLIERGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVL 1038

Query: 660  DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEV 481
            DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLI+ERLMISSDPFEV
Sbjct: 1039 DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEV 1098

Query: 480  QVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 301
            QVCR CGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA
Sbjct: 1099 QVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158


>ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Eucalyptus
            grandis]
          Length = 1152

 Score = 1699 bits (4399), Expect = 0.0
 Identities = 845/1028 (82%), Positives = 922/1028 (89%), Gaps = 10/1028 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K +V I RMPIMLRSCCCVL+ KDE ELARLGECPLDPGGYF+IKGTEKVILIQEQLSK
Sbjct: 131  EKNDVTIARMPIMLRSCCCVLFRKDEDELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 190

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGME 2995
            NRIIID DKKGNINASV            + MEKGK+YL L+QF+  +PIM+VMKAM ME
Sbjct: 191  NRIIIDTDKKGNINASVTSSTEATKSKTVVVMEKGKMYLQLNQFAKNIPIMIVMKAMRME 250

Query: 2994 SDQEVVQMVGRDPRYSALLMPSIEECGK-DIHTKEQALDYLESKLKRSMYPPSAHAPNAS 2818
            SDQEVVQM+GRDPRYSALL+ SIEEC    I T++QAL++LE KLK+  Y       N S
Sbjct: 251  SDQEVVQMIGRDPRYSALLLQSIEECASLSIFTQQQALEFLEGKLKKLPYA------NMS 304

Query: 2817 SEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKR 2638
            + K GR M+IL+DVFLANVRV +NNFRPKCIYV VMLRR+M+AILNKDA+DDKDYVGNKR
Sbjct: 305  TGKEGRAMSILRDVFLANVRVIKNNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKR 364

Query: 2637 LELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERALS 2458
            LELSGQLISLLFEDLFKTMI++V++  D++L+K SRSS+ D +  +V+D IT GLERALS
Sbjct: 365  LELSGQLISLLFEDLFKTMISEVQKQADNVLSKRSRSSQLDLSMLLVKDIITQGLERALS 424

Query: 2457 TGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGMLC 2278
            TGNWDVKRF+M++KG+TQVL RLSFIGTLGH+TRI+PQFEKSRKVSGPRALQPSQWGMLC
Sbjct: 425  TGNWDVKRFRMHRKGMTQVLARLSFIGTLGHVTRISPQFEKSRKVSGPRALQPSQWGMLC 484

Query: 2277 PCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLVI 2098
            PCDTPEGEACGLVKNLALMTHVTTD+EE PLI+L YCLGVEDLELLSGEELH PNSFL+I
Sbjct: 485  PCDTPEGEACGLVKNLALMTHVTTDQEEGPLIALCYCLGVEDLELLSGEELHTPNSFLII 544

Query: 2097 FNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIAD 1918
            FNG ILGKHRRPQRFA  +R LRR G+IGEFVSVF+NEKQ CVYIASDGGRVCRPLVIAD
Sbjct: 545  FNGLILGKHRRPQRFANTMRKLRRIGRIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIAD 604

Query: 1917 KGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEIE 1738
            KGISRIKEHHMK LLDG RTFDDFLREGL+EYLDVNEENNALIALYE DATPETTHIEIE
Sbjct: 605  KGISRIKEHHMKGLLDGARTFDDFLREGLVEYLDVNEENNALIALYEQDATPETTHIEIE 664

Query: 1737 PFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPLL 1558
            PFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQ+PLL
Sbjct: 665  PFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLLRMDTLLYLLVYPQRPLL 724

Query: 1557 TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAIIQ 1378
            TTRTIEL GYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMK+ SA+ Q
Sbjct: 725  TTRTIELTGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYSAVNQ 784

Query: 1377 KYENNTQDRIARPNRAGN--------DAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRV 1222
            KYEN T DRI RP R  +        D  RMQ+LD+DGIAAPGEIIRPND+YINK++P +
Sbjct: 785  KYENGTSDRILRPPRKDDRNKKGENPDWERMQILDNDGIAAPGEIIRPNDVYINKESPII 844

Query: 1221 TRGT-MVTGLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVG 1045
            T+G   + GL DSD+K + QTFKG  GES VVD+V L +DKN N+ IK++IRHTRRPEVG
Sbjct: 845  TKGNPKLGGLKDSDYKPSRQTFKGAEGESCVVDRVTLSSDKNYNLSIKFMIRHTRRPEVG 904

Query: 1044 DKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVS 865
            DKFSSRHGQKGVCGTIVQQEDFPFSE GICPDLIMNPHGFPSRMTVGKMIELLGGKAGVS
Sbjct: 905  DKFSSRHGQKGVCGTIVQQEDFPFSEHGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVS 964

Query: 864  CGRFHYGSAFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYY 685
            CGRFHYGSAFGEPSGHAD VEAIS TLV+ GFSYNGKDF+YSGITGCPLQAYIFMGPIYY
Sbjct: 965  CGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYNGKDFLYSGITGCPLQAYIFMGPIYY 1024

Query: 684  QKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLM 505
            QKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLI+ERLM
Sbjct: 1025 QKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLM 1084

Query: 504  ISSDPFEVQVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIV 325
            +SSDPFEVQVCRACGLLGYYN+KLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIV
Sbjct: 1085 LSSDPFEVQVCRACGLLGYYNYKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIV 1144

Query: 324  PRLKLAEA 301
            PRL+LA++
Sbjct: 1145 PRLRLADS 1152


>ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
            [Populus euphratica]
          Length = 1150

 Score = 1688 bits (4372), Expect = 0.0
 Identities = 838/1020 (82%), Positives = 915/1020 (89%), Gaps = 3/1020 (0%)
 Frame = -2

Query: 3351 KENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSKN 3172
            K +VVIGRMPIMLRSCCCVL GK+EAELARLGECPLDPGGYF++KGTEKVILIQEQLSKN
Sbjct: 140  KNDVVIGRMPIMLRSCCCVLSGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 199

Query: 3171 RIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGMES 2992
            RIIID DKKGNINASV            I MEK K+YL L+QF+ K+PIMVVMKAMGMES
Sbjct: 200  RIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGMES 259

Query: 2991 DQEVVQMVGRDPRYSALLMPSIEECGKD-IHTKEQALDYLESKLKRSMYPPSAHAPNASS 2815
            DQEVVQMVGRDPRYSALL+PSIEEC    ++T+EQAL+YLE+ +KRS Y  S      S+
Sbjct: 260  DQEVVQMVGRDPRYSALLLPSIEECASHGVYTREQALEYLEAMVKRSTYSSS------ST 313

Query: 2814 EKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKRL 2635
            EK  R + IL+DVF+ANV V +NNFRPKCIYV VMLRR+M+A+LNKDA+DDKDYVGNKRL
Sbjct: 314  EKENRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRL 373

Query: 2634 ELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERALST 2455
            ELSGQLISLLFEDLFKTMIT+V++  D++L K +RSSRFDF+Q+IVRD+ITNGLERALST
Sbjct: 374  ELSGQLISLLFEDLFKTMITEVQKIADALLVKQNRSSRFDFSQYIVRDSITNGLERALST 433

Query: 2454 GNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGMLCP 2275
            GNWDVKRF+MN+KGVTQVL RLS++ +LGHMTRI+PQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 434  GNWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCP 493

Query: 2274 CDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLVIF 2095
            CDTPEGEACGLVKNLALMTHVTTDEEE PLISL  CLGVEDLELLSGEELH PNSFLVIF
Sbjct: 494  CDTPEGEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIF 553

Query: 2094 NGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIADK 1915
            NG ILGKHRRP +FA A+R LRRAGKIGEFVSVF+NEKQR VYIASDGGRVCRPLVIADK
Sbjct: 554  NGLILGKHRRPHQFANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADK 613

Query: 1914 GISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEIEP 1735
            G+SRIKEHHM+EL+DG RTFDDFL EGLIEYLDVNEENNALIALYE +ATPETTHIEIEP
Sbjct: 614  GVSRIKEHHMRELMDGARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPETTHIEIEP 673

Query: 1734 FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPLLT 1555
            FTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+LLYLLVYPQ+PLLT
Sbjct: 674  FTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLGRMDSLLYLLVYPQRPLLT 733

Query: 1554 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAIIQK 1375
            TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIV+K+ +   QK
Sbjct: 734  TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKYTCTNQK 793

Query: 1374 YENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMVTGL 1195
            YEN   DRI RP +   +  R +VLDDDG+AAPGEIIR  DIYINK++P  TRG + +  
Sbjct: 794  YENGASDRILRPRK---NEERERVLDDDGLAAPGEIIRHGDIYINKESPIETRGPLKSAA 850

Query: 1194 TDSDFKFAP--QTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRHG 1021
              +D K+ P  Q FKG  GES VVD+VAL +DKNNN+CIKY IRHTRRPEVGDKFSSRHG
Sbjct: 851  ALADVKYRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGDKFSSRHG 910

Query: 1020 QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 841
            QKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS
Sbjct: 911  QKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 970

Query: 840  AFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 661
            AFGEPSGHAD VEAIS TLV+ GFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL
Sbjct: 971  AFGEPSGHADRVEAISETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 1030

Query: 660  DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEV 481
            DKMHARGSGPRVMLTRQPT+GRARNGGLRVGEME+DCL+AYG SML++ERLM+SSD FE 
Sbjct: 1031 DKMHARGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLLYERLMVSSDQFEA 1090

Query: 480  QVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 301
            QVCRACGLLGYYN KLK  +C++CKNGD +STMKLPYACKLLIQELQSMNIVPRL+LAEA
Sbjct: 1091 QVCRACGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQSMNIVPRLRLAEA 1150


>ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
            [Populus euphratica]
          Length = 1151

 Score = 1684 bits (4362), Expect = 0.0
 Identities = 835/1020 (81%), Positives = 915/1020 (89%), Gaps = 3/1020 (0%)
 Frame = -2

Query: 3351 KENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSKN 3172
            K +VVIGRMPIMLRSCCCVL GK+EAELARLGECPLDPGGYF++KGTEKVILIQEQLSKN
Sbjct: 140  KNDVVIGRMPIMLRSCCCVLSGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 199

Query: 3171 RIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGMES 2992
            RIIID DKKGNINASV            I MEK K+YL L+QF+ K+PIMVVMKAMGMES
Sbjct: 200  RIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGMES 259

Query: 2991 DQEVVQMVGRDPRYSALLMPSIEECGKD-IHTKEQALDYLESKLKRSMYPPSAHAPNASS 2815
            DQEVVQMVGRDPRYSALL+PSIEEC    ++T+EQAL+YLE+ +KRS Y  S+     + 
Sbjct: 260  DQEVVQMVGRDPRYSALLLPSIEECASHGVYTREQALEYLEAMVKRSTYSSSS-----TE 314

Query: 2814 EKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKRL 2635
            ++  R + IL+DVF+ANV V +NNFRPKCIYV VMLRR+M+A+LNKDA+DDKDYVGNKRL
Sbjct: 315  KQENRALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRL 374

Query: 2634 ELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERALST 2455
            ELSGQLISLLFEDLFKTMIT+V++  D++L K +RSSRFDF+Q+IVRD+ITNGLERALST
Sbjct: 375  ELSGQLISLLFEDLFKTMITEVQKIADALLVKQNRSSRFDFSQYIVRDSITNGLERALST 434

Query: 2454 GNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGMLCP 2275
            GNWDVKRF+MN+KGVTQVL RLS++ +LGHMTRI+PQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 435  GNWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCP 494

Query: 2274 CDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLVIF 2095
            CDTPEGEACGLVKNLALMTHVTTDEEE PLISL  CLGVEDLELLSGEELH PNSFLVIF
Sbjct: 495  CDTPEGEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIF 554

Query: 2094 NGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIADK 1915
            NG ILGKHRRP +FA A+R LRRAGKIGEFVSVF+NEKQR VYIASDGGRVCRPLVIADK
Sbjct: 555  NGLILGKHRRPHQFANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADK 614

Query: 1914 GISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEIEP 1735
            G+SRIKEHHM+EL+DG RTFDDFL EGLIEYLDVNEENNALIALYE +ATPETTHIEIEP
Sbjct: 615  GVSRIKEHHMRELMDGARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPETTHIEIEP 674

Query: 1734 FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPLLT 1555
            FTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+LLYLLVYPQ+PLLT
Sbjct: 675  FTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLGRMDSLLYLLVYPQRPLLT 734

Query: 1554 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAIIQK 1375
            TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIV+K+ +   QK
Sbjct: 735  TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKYTCTNQK 794

Query: 1374 YENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMVTGL 1195
            YEN   DRI RP +   +  R +VLDDDG+AAPGEIIR  DIYINK++P  TRG + +  
Sbjct: 795  YENGASDRILRPRK---NEERERVLDDDGLAAPGEIIRHGDIYINKESPIETRGPLKSAA 851

Query: 1194 TDSDFKFAP--QTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRHG 1021
              +D K+ P  Q FKG  GES VVD+VAL +DKNNN+CIKY IRHTRRPEVGDKFSSRHG
Sbjct: 852  ALADVKYRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGDKFSSRHG 911

Query: 1020 QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 841
            QKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS
Sbjct: 912  QKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 971

Query: 840  AFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 661
            AFGEPSGHAD VEAIS TLV+ GFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL
Sbjct: 972  AFGEPSGHADRVEAISETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 1031

Query: 660  DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEV 481
            DKMHARGSGPRVMLTRQPT+GRARNGGLRVGEME+DCL+AYG SML++ERLM+SSD FE 
Sbjct: 1032 DKMHARGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLLYERLMVSSDQFEA 1091

Query: 480  QVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 301
            QVCRACGLLGYYN KLK  +C++CKNGD +STMKLPYACKLLIQELQSMNIVPRL+LAEA
Sbjct: 1092 QVCRACGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQSMNIVPRLRLAEA 1151


>ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Gossypium
            raimondii] gi|763808128|gb|KJB75030.1| hypothetical
            protein B456_012G019600 [Gossypium raimondii]
          Length = 1158

 Score = 1684 bits (4361), Expect = 0.0
 Identities = 837/1022 (81%), Positives = 918/1022 (89%), Gaps = 4/1022 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K ++VIGRMPIMLRSCCCVL GKDEAELARLGECPLDPGGYF+IKGTEKVILIQEQLSK
Sbjct: 142  EKNDLVIGRMPIMLRSCCCVLQGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 201

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGME 2995
            NRIIID DKKGNINASV            IQMEK K+YL+L+QF  K+PIMVVMKAMGME
Sbjct: 202  NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 261

Query: 2994 SDQEVVQMVGRDPRYSALLMPSIEEC-GKDIHTKEQALDYLESKLKRSMYPPSAHAPNAS 2818
            SDQEVVQM+GRDPR+SALL+PSIEEC G  I+TKEQAL YL++K KR +Y  SA      
Sbjct: 262  SDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALAYLDTKAKRPLYASSA------ 315

Query: 2817 SEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKR 2638
            S++ GR   IL+DVF+ANV V  NNFRPKC+YV VMLRR+M+AILNKDA+DDKDYVGNKR
Sbjct: 316  SDQDGRAFCILRDVFIANVPVRCNNFRPKCLYVAVMLRRMMEAILNKDAMDDKDYVGNKR 375

Query: 2637 LELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVR-DNITNGLERAL 2461
            LELSGQLISLLFEDLFKT +  VK+++DS+L+K SRSS  D +Q++ R + IT GLER L
Sbjct: 376  LELSGQLISLLFEDLFKTTLAQVKKSIDSVLSKTSRSSALDPSQFLRRMEFITTGLERTL 435

Query: 2460 STGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGML 2281
            STGN+D++RF+M++KG+TQVL RLSFIGTLG MT+++PQFEKSRKVSGPRALQPSQWGML
Sbjct: 436  STGNFDIQRFRMHRKGMTQVLARLSFIGTLGFMTKVSPQFEKSRKVSGPRALQPSQWGML 495

Query: 2280 CPCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLV 2101
            CPCDTPEGEACGLVKNLALMTHVTTDE+E PL+SL YCLGVEDLELLSGEELH PNSFLV
Sbjct: 496  CPCDTPEGEACGLVKNLALMTHVTTDEDEGPLVSLCYCLGVEDLELLSGEELHTPNSFLV 555

Query: 2100 IFNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIA 1921
            + NG ILGKHRRPQ FA A+R LRRAGK+GEFVSVF+NEKQRCVYIASDGGRVCRPLVIA
Sbjct: 556  MLNGLILGKHRRPQHFANALRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIA 615

Query: 1920 DKGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEI 1741
            DKGISRIKEHHMKELLDGVRTFDDFL +GLIEYLDVNEENNALIALYE +ATPETTHIEI
Sbjct: 616  DKGISRIKEHHMKELLDGVRTFDDFLSDGLIEYLDVNEENNALIALYEGEATPETTHIEI 675

Query: 1740 EPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPL 1561
            EPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQ+PL
Sbjct: 676  EPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPL 735

Query: 1560 LTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAII 1381
            LTTRTIELVGYDKLGAGQNATVAV+SYSGYDIEDAIVMNK+SLDRGFGRCIVMK+ S +I
Sbjct: 736  LTTRTIELVGYDKLGAGQNATVAVISYSGYDIEDAIVMNKSSLDRGFGRCIVMKKSSNVI 795

Query: 1380 QKYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMVT 1201
            QKYEN   DRI RP R G  + +M +LDDDGIA+PGEIIRPNDI +NK+ P  TRGT V+
Sbjct: 796  QKYENGATDRILRPQRTGPGSEKMLILDDDGIASPGEIIRPNDILLNKEVPIHTRGTRVS 855

Query: 1200 --GLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSR 1027
               L DS +K   Q++KGP GES V+D+V+L TD+N N+ IK+LIRHTRRPE+GDKFSSR
Sbjct: 856  SDSLPDSAYKPVRQSYKGPEGESCVMDRVSLSTDRNGNLSIKFLIRHTRRPELGDKFSSR 915

Query: 1026 HGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHY 847
            HGQKGVCG I+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHY
Sbjct: 916  HGQKGVCGIIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHY 975

Query: 846  GSAFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM 667
            GSAFGEPSGHAD VE IS TLV+ GF YNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM
Sbjct: 976  GSAFGEPSGHADKVETISETLVKHGFCYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM 1035

Query: 666  VLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPF 487
            VLDKMHARG+GPRVMLTRQPTEGRAR GGLRVGEMERDCLIAYGASMLIFERLM+SSDPF
Sbjct: 1036 VLDKMHARGNGPRVMLTRQPTEGRARKGGLRVGEMERDCLIAYGASMLIFERLMVSSDPF 1095

Query: 486  EVQVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLA 307
            EVQVCR CGLLGYY+HKLKTGICSSCKNGD++STM+LPYACKLLIQELQSMNIVPRLKLA
Sbjct: 1096 EVQVCRKCGLLGYYSHKLKTGICSSCKNGDDVSTMQLPYACKLLIQELQSMNIVPRLKLA 1155

Query: 306  EA 301
            EA
Sbjct: 1156 EA 1157


>ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Sesamum
            indicum]
          Length = 1152

 Score = 1684 bits (4361), Expect = 0.0
 Identities = 827/1020 (81%), Positives = 921/1020 (90%), Gaps = 3/1020 (0%)
 Frame = -2

Query: 3351 KENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSKN 3172
            K +V+IGRMPIMLRSCCC+LYGKDE ELAR GECPLDPGGYF+IKGTEKVILIQEQLSKN
Sbjct: 140  KRDVIIGRMPIMLRSCCCILYGKDEEELARYGECPLDPGGYFVIKGTEKVILIQEQLSKN 199

Query: 3171 RIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGMES 2992
            RIIID DKKG + ASV            I+MEK K+YL L+QF++KVPIMVV+KAMGMES
Sbjct: 200  RIIIDTDKKGCVQASVTSSTEMTKSKTVIRMEKEKIYLYLNQFTSKVPIMVVLKAMGMES 259

Query: 2991 DQEVVQMVGRDPRYSALLMPSIEECGKD-IHTKEQALDYLESKLKRSMYPPSAHAPNASS 2815
            DQEVVQM+GRDPRYS LL+PSIE+C K+ +HT+ QAL++LE K+K+  Y   A       
Sbjct: 260  DQEVVQMIGRDPRYSELLLPSIEDCVKEAVHTQHQALEFLEQKVKKLPYSTPA------- 312

Query: 2814 EKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKRL 2635
            +K GR + IL+D+FLAN+ V QNNFRPKCIYV VM+RRI++AILNKDA+DDKDYVGNKRL
Sbjct: 313  DKEGRALGILRDIFLANIPVRQNNFRPKCIYVAVMVRRILEAILNKDAMDDKDYVGNKRL 372

Query: 2634 ELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERALST 2455
            ELSGQL+SLLFEDLFKTM  + ++T+D+ILAKPSRSSRFD +Q+IV+D+IT GLER LST
Sbjct: 373  ELSGQLLSLLFEDLFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLST 432

Query: 2454 GNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGMLCP 2275
            GNWDVKRF+M++KG+TQV+ RLS+IGTLGHMT+I+PQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 433  GNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 492

Query: 2274 CDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLVIF 2095
            CDTPEGEACGLVKNLALMTHVTTD++E PLISL Y LGVEDLELLSGEELH PNS+L+I 
Sbjct: 493  CDTPEGEACGLVKNLALMTHVTTDDDEGPLISLCYSLGVEDLELLSGEELHMPNSYLIIL 552

Query: 2094 NGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIADK 1915
            NG ILGKHRRPQRFA A+R LRR+GKIGEFVS+F+NEKQ  VYIASDGGRVCRPLVIADK
Sbjct: 553  NGLILGKHRRPQRFAKAMRKLRRSGKIGEFVSIFVNEKQHSVYIASDGGRVCRPLVIADK 612

Query: 1914 GISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEIEP 1735
            G+SRIKEHHMKEL DGVR FD FL+EGLIEYLDVNEENNALIALYE +A   TTHIEIEP
Sbjct: 613  GVSRIKEHHMKELKDGVRNFDSFLKEGLIEYLDVNEENNALIALYEENANERTTHIEIEP 672

Query: 1734 FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPLLT 1555
            FTILG+ AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+YLLVYPQ+PLLT
Sbjct: 673  FTILGIIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLT 732

Query: 1554 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAIIQK 1375
            TRTIELV +DKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+K+++A+ QK
Sbjct: 733  TRTIELVRFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVIKKMTAVSQK 792

Query: 1374 YENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRG--TMVT 1201
            YEN T DRI RP R G +A RMQ+LDDDG+AAPGEIIRP+DIYINK++P VTRG  T   
Sbjct: 793  YENGTSDRILRPPREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPIVTRGPVTSPM 852

Query: 1200 GLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRHG 1021
            GL DS +K + QT+KGP GE+ VVD+VAL +D+NNN+CIK++IRHTRRPE+GDKFSSRHG
Sbjct: 853  GLPDSAYKPSRQTYKGPDGETPVVDRVALCSDRNNNLCIKFMIRHTRRPELGDKFSSRHG 912

Query: 1020 QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 841
            QKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS
Sbjct: 913  QKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 972

Query: 840  AFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 661
            AFGEPSGHAD VEAIS TLV+ GFSYNGKDFIYSGITG PLQAYIFMGPIYYQKLKHMVL
Sbjct: 973  AFGEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVL 1032

Query: 660  DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEV 481
            DKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLMISSDPFEV
Sbjct: 1033 DKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEV 1092

Query: 480  QVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 301
            QVCR CGLLGYYN KLKTGICS+CKNG+NISTMKLPYACKLLIQELQ+MNI+PRLKL EA
Sbjct: 1093 QVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLIQELQAMNIIPRLKLTEA 1152


>ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Fragaria
            vesca subsp. vesca]
          Length = 1163

 Score = 1682 bits (4356), Expect = 0.0
 Identities = 836/1018 (82%), Positives = 913/1018 (89%), Gaps = 1/1018 (0%)
 Frame = -2

Query: 3351 KENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSKN 3172
            ++ + IGR+PIMLRSCCC LYGK E+ELA LGECPLDPGGYFIIKG EKV+LIQEQLSKN
Sbjct: 153  RKGIEIGRLPIMLRSCCCTLYGKTESELATLGECPLDPGGYFIIKGNEKVLLIQEQLSKN 212

Query: 3171 RIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGMES 2992
            RIIIDMDKKGN+NASV            IQMEK K+YL L+QFS K+PIMVVMKAMGM S
Sbjct: 213  RIIIDMDKKGNVNASVTSSSETIKSKTIIQMEKQKIYLELNQFSKKIPIMVVMKAMGMTS 272

Query: 2991 DQEVVQMVGRDPRYSALLMPSIEECGKD-IHTKEQALDYLESKLKRSMYPPSAHAPNASS 2815
            DQEVVQMVGRDPRY ALLMPSIEEC K+ I+TKEQAL YLE K+KRSM+       +ASS
Sbjct: 273  DQEVVQMVGRDPRYGALLMPSIEECAKEGIYTKEQALLYLEPKVKRSMFD------SASS 326

Query: 2814 EKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKRL 2635
            +K  +VM +L+D+F+ANV V ++NFRPKCIYV VMLRRIMDAILNKD +DDKDYVGNKRL
Sbjct: 327  DKDSKVMAVLRDIFIANVPVRRSNFRPKCIYVAVMLRRIMDAILNKDTMDDKDYVGNKRL 386

Query: 2634 ELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERALST 2455
            ELSGQ ISLLFEDLFKTMI++V++TVD+IL KPSRSSRFD AQ+I +D I+ GLER LST
Sbjct: 387  ELSGQSISLLFEDLFKTMISEVRKTVDNILTKPSRSSRFDLAQYIRKDQISLGLERTLST 446

Query: 2454 GNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGMLCP 2275
            GN+D+KRFKM++ G+TQVL RLSFIG+LG MTR  PQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 447  GNFDLKRFKMHRTGMTQVLARLSFIGSLGQMTRTKPQFEKSRKVSGPRALQPSQWGMLCP 506

Query: 2274 CDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLVIF 2095
            CDTPEGEACGLVKNLALM HVTTDEEE PLISL  CLGVEDLE LS EELH+PNSFLV+F
Sbjct: 507  CDTPEGEACGLVKNLALMAHVTTDEEEGPLISLCKCLGVEDLETLSAEELHSPNSFLVLF 566

Query: 2094 NGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIADK 1915
            NG ILGKHR+PQR ATA+R LRRAGKIGEFVSVF+NEKQ CVYIASDGGRVCRPLVIADK
Sbjct: 567  NGDILGKHRKPQRLATAMRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADK 626

Query: 1914 GISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEIEP 1735
            GISR+KE+HM+EL  GVRTFDDFL +GLIEYLDVNE+NNALIALYE +AT ETTHIEIEP
Sbjct: 627  GISRVKEYHMQELNAGVRTFDDFLSDGLIEYLDVNEQNNALIALYEDEATTETTHIEIEP 686

Query: 1734 FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPLLT 1555
            FTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL R+D LLYLLVYPQ+PLLT
Sbjct: 687  FTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRID-LLYLLVYPQRPLLT 745

Query: 1554 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAIIQK 1375
            T+TIELVG+DKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI+MK+     Q 
Sbjct: 746  TKTIELVGFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCILMKKFVVANQN 805

Query: 1374 YENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMVTGL 1195
            Y NNTQDRI +PN+   D+G+M+VLDDDGIAAPGEII  NDIY+ KQ P VTRG + +GL
Sbjct: 806  YSNNTQDRIIKPNKDEVDSGKMRVLDDDGIAAPGEIITANDIYVKKQVPIVTRGAIRSGL 865

Query: 1194 TDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRHGQK 1015
             DSD++   Q +KGP GES VVDKVALF+DK+NN+C+K LIRHTRRPEVGDKFSSRHGQK
Sbjct: 866  KDSDYRSTFQRYKGPDGESCVVDKVALFSDKHNNLCVKLLIRHTRRPEVGDKFSSRHGQK 925

Query: 1014 GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 835
            GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF
Sbjct: 926  GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 985

Query: 834  GEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDK 655
            GEPSGHAD VEAIS TLV  GFSY+GKD+I SGITGCPLQAYIFMGPIYYQKLKHMVLDK
Sbjct: 986  GEPSGHADKVEAISETLVRMGFSYDGKDYICSGITGCPLQAYIFMGPIYYQKLKHMVLDK 1045

Query: 654  MHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQV 475
            MHARGSGPRV LTRQPTEG+ARNGGLRVGEMERDCLIAYGASML++ERLMISSDPFEVQV
Sbjct: 1046 MHARGSGPRVSLTRQPTEGKARNGGLRVGEMERDCLIAYGASMLLYERLMISSDPFEVQV 1105

Query: 474  CRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 301
            CR CGLLGYYNHK+K GICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA
Sbjct: 1106 CRVCGLLGYYNHKMKAGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1163


>gb|KJB75029.1| hypothetical protein B456_012G019600 [Gossypium raimondii]
          Length = 1159

 Score = 1681 bits (4352), Expect = 0.0
 Identities = 838/1023 (81%), Positives = 918/1023 (89%), Gaps = 5/1023 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K ++VIGRMPIMLRSCCCVL GKDEAELARLGECPLDPGGYF+IKGTEKVILIQEQLSK
Sbjct: 142  EKNDLVIGRMPIMLRSCCCVLQGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 201

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGME 2995
            NRIIID DKKGNINASV            IQMEK K+YL+L+QF  K+PIMVVMKAMGME
Sbjct: 202  NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 261

Query: 2994 SDQEVVQMVGRDPRYSALLMPSIEEC-GKDIHTKEQALDYLESKLKRSMYPPSAHAPNAS 2818
            SDQEVVQM+GRDPR+SALL+PSIEEC G  I+TKEQAL YL++K KR +Y  SA      
Sbjct: 262  SDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALAYLDTKAKRPLYASSA------ 315

Query: 2817 SEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKR 2638
            S++ GR   IL+DVF+ANV V  NNFRPKC+YV VMLRR+M+AILNKDA+DDKDYVGNKR
Sbjct: 316  SDQDGRAFCILRDVFIANVPVRCNNFRPKCLYVAVMLRRMMEAILNKDAMDDKDYVGNKR 375

Query: 2637 LELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVR-DNITNGLERAL 2461
            LELSGQLISLLFEDLFKT +  VK+++DS+L+K SRSS  D +Q++ R + IT GLER L
Sbjct: 376  LELSGQLISLLFEDLFKTTLAQVKKSIDSVLSKTSRSSALDPSQFLRRMEFITTGLERTL 435

Query: 2460 STGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGML 2281
            STGN+D++RF+M++KG+TQVL RLSFIGTLG MT+++PQFEKSRKVSGPRALQPSQWGML
Sbjct: 436  STGNFDIQRFRMHRKGMTQVLARLSFIGTLGFMTKVSPQFEKSRKVSGPRALQPSQWGML 495

Query: 2280 CPCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLV 2101
            CPCDTPEGEACGLVKNLALMTHVTTDE+E PL+SL YCLGVEDLELLSGEELH PNSFLV
Sbjct: 496  CPCDTPEGEACGLVKNLALMTHVTTDEDEGPLVSLCYCLGVEDLELLSGEELHTPNSFLV 555

Query: 2100 IFNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIA 1921
            + NG ILGKHRRPQ FA A+R LRRAGK+GEFVSVF+NEKQRCVYIASDGGRVCRPLVIA
Sbjct: 556  MLNGLILGKHRRPQHFANALRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIA 615

Query: 1920 DKGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEI 1741
            DKGISRIKEHHMKELLDGVRTFDDFL +GLIEYLDVNEENNALIALYE +ATPETTHIEI
Sbjct: 616  DKGISRIKEHHMKELLDGVRTFDDFLSDGLIEYLDVNEENNALIALYEGEATPETTHIEI 675

Query: 1740 EPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPL 1561
            EPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLLYLLVYPQ+PL
Sbjct: 676  EPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPL 735

Query: 1560 LTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMK-RLSAI 1384
            LTTRTIELVGYDKLGAGQNATVAV+SYSGYDIEDAIVMNK+SLDRGFGRCIVMK R S +
Sbjct: 736  LTTRTIELVGYDKLGAGQNATVAVISYSGYDIEDAIVMNKSSLDRGFGRCIVMKNRSSNV 795

Query: 1383 IQKYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMV 1204
            IQKYEN   DRI RP R G  + +M +LDDDGIA+PGEIIRPNDI +NK+ P  TRGT V
Sbjct: 796  IQKYENGATDRILRPQRTGPGSEKMLILDDDGIASPGEIIRPNDILLNKEVPIHTRGTRV 855

Query: 1203 T--GLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSS 1030
            +   L DS +K   Q++KGP GES V+D+V+L TD+N N+ IK+LIRHTRRPE+GDKFSS
Sbjct: 856  SSDSLPDSAYKPVRQSYKGPEGESCVMDRVSLSTDRNGNLSIKFLIRHTRRPELGDKFSS 915

Query: 1029 RHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 850
            RHGQKGVCG I+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH
Sbjct: 916  RHGQKGVCGIIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 975

Query: 849  YGSAFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKH 670
            YGSAFGEPSGHAD VE IS TLV+ GF YNGKDFIYSGITGCPLQAYIFMGPIYYQKLKH
Sbjct: 976  YGSAFGEPSGHADKVETISETLVKHGFCYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKH 1035

Query: 669  MVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDP 490
            MVLDKMHARG+GPRVMLTRQPTEGRAR GGLRVGEMERDCLIAYGASMLIFERLM+SSDP
Sbjct: 1036 MVLDKMHARGNGPRVMLTRQPTEGRARKGGLRVGEMERDCLIAYGASMLIFERLMVSSDP 1095

Query: 489  FEVQVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKL 310
            FEVQVCR CGLLGYY+HKLKTGICSSCKNGD++STM+LPYACKLLIQELQSMNIVPRLKL
Sbjct: 1096 FEVQVCRKCGLLGYYSHKLKTGICSSCKNGDDVSTMQLPYACKLLIQELQSMNIVPRLKL 1155

Query: 309  AEA 301
            AEA
Sbjct: 1156 AEA 1158


>ref|XP_012068721.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Jatropha
            curcas] gi|643733723|gb|KDP40566.1| hypothetical protein
            JCGZ_24565 [Jatropha curcas]
          Length = 1152

 Score = 1679 bits (4348), Expect = 0.0
 Identities = 834/1021 (81%), Positives = 918/1021 (89%), Gaps = 3/1021 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K +VVIGRMPIMLRS  CVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK
Sbjct: 141  EKNDVVIGRMPIMLRSRGCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 200

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGME 2995
            NRIIID DKKGNINASV            IQMEK K+YL L+QF+ K+PIMVVMKAMGME
Sbjct: 201  NRIIIDNDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFAKKIPIMVVMKAMGME 260

Query: 2994 SDQEVVQMVGRDPRYSALLMPSIEECGK-DIHTKEQALDYLESKLKRSMYPPSAHAPNAS 2818
            SDQEVVQM+GRDPRYSALL+PSIEEC   +I+T+++AL+YLE K+K   Y  S++     
Sbjct: 261  SDQEVVQMLGRDPRYSALLLPSIEECASLNIYTQQKALEYLEGKVKMPTYFSSSYV---- 316

Query: 2817 SEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKR 2638
              K  R + IL+DVFLANV VH+NNFRPKC+YV VMLRR+M+A+LNKDA+DDKDYVGNKR
Sbjct: 317  --KENRALGILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKR 374

Query: 2637 LELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERALS 2458
            LELSGQLISLLFEDLFKTMIT+V+RT+D++L+KP+RSSRFD AQ++VRD+ITNGLER LS
Sbjct: 375  LELSGQLISLLFEDLFKTMITEVQRTIDAVLSKPNRSSRFDLAQYLVRDSITNGLERTLS 434

Query: 2457 TGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGMLC 2278
            TGN+DVKRF+M++KG+TQVL RLSFI +LG MTR++PQFEKSRKVSGPRALQPSQWGMLC
Sbjct: 435  TGNFDVKRFRMHRKGMTQVLVRLSFIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLC 494

Query: 2277 PCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLVI 2098
            PCDTPEGEACGLVKNLALMTHVTTDEEE PLISL YCLGVEDLELLSGEELH PNSFLVI
Sbjct: 495  PCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVI 554

Query: 2097 FNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIAD 1918
             NG ILGKHRRPQ FA A+R LRRAGKIGEFVSVF+NEKQ  VYIASDGGRVCRPLVIAD
Sbjct: 555  CNGLILGKHRRPQHFANALRKLRRAGKIGEFVSVFVNEKQHAVYIASDGGRVCRPLVIAD 614

Query: 1917 KGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEIE 1738
            KG+SRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYE +ATPETTHIEIE
Sbjct: 615  KGVSRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEGEATPETTHIEIE 674

Query: 1737 PFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPLL 1558
            PFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+LLYLLVYPQ+PLL
Sbjct: 675  PFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLL 734

Query: 1557 TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAIIQ 1378
            TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCI++K+ +A IQ
Sbjct: 735  TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCILLKKYTATIQ 794

Query: 1377 KYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMVTG 1198
            KYEN  +DRI RP +      + ++LD DG+AAPGEIIR NDIYINK+ P  TRG + + 
Sbjct: 795  KYENGAEDRIVRPRKTEE---KERLLDYDGMAAPGEIIRANDIYINKECPVETRGPLKSA 851

Query: 1197 LTDSDFKFAP--QTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRH 1024
               +D K+ P    +K   GES VVD+VAL +D+NNN CIK++IRHTRRPE+GDKFSSRH
Sbjct: 852  AALADMKYKPSYNAYKYTEGESCVVDRVALCSDRNNNFCIKFIIRHTRRPELGDKFSSRH 911

Query: 1023 GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 844
            GQKGVCG I+ QEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG
Sbjct: 912  GQKGVCGVIIPQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 971

Query: 843  SAFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 664
            SAFGEPSGHAD VE IS TLV++GFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV
Sbjct: 972  SAFGEPSGHADRVETISQTLVDRGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 1031

Query: 663  LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFE 484
            LDK+HARGSGPR +LTRQPTEGRA+NGGLRVGEMERDCLIAYGASMLIFERLMISSDPFE
Sbjct: 1032 LDKIHARGSGPRTLLTRQPTEGRAKNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFE 1091

Query: 483  VQVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAE 304
            VQVCR CGLLGY+N KL++GICS+CKNGDNISTMKLPYACKLL+QELQSMNI+PRLKL E
Sbjct: 1092 VQVCRVCGLLGYFNQKLRSGICSTCKNGDNISTMKLPYACKLLLQELQSMNIIPRLKLDE 1151

Query: 303  A 301
            A
Sbjct: 1152 A 1152


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1678 bits (4345), Expect = 0.0
 Identities = 836/1021 (81%), Positives = 913/1021 (89%), Gaps = 3/1021 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +K +VVIGRMPIMLRS  CVLYGKDEAELARLGECPLDPGGYF+IKGTEKVILIQEQLSK
Sbjct: 141  EKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 200

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGME 2995
            NRIIID DKKGNINASV            IQMEK K+YL L+QF  K+PIMVV+KAMGME
Sbjct: 201  NRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMGME 260

Query: 2994 SDQEVVQMVGRDPRYSALLMPSIEEC-GKDIHTKEQALDYLESKLKRSMYPPSAHAPNAS 2818
            SDQEVVQMVGRDPRYSALL+PSIEEC G  I+T+++AL+YL+ K                
Sbjct: 261  SDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLDGK---------------- 304

Query: 2817 SEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKR 2638
                 R +TIL+DVFLANV VH+NNFRPKC+YV VMLRR+M+A+LNKDA+DDKDYVGNKR
Sbjct: 305  ---ENRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKR 361

Query: 2637 LELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERALS 2458
            LELSGQLISLLFEDLFKTMIT+V+RT+D++L K +RSSRFD AQ+IVRDNITNGLER LS
Sbjct: 362  LELSGQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLS 421

Query: 2457 TGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGMLC 2278
            TGN+DVKRFKM++KG+TQVL RLS+I +LG MTR++PQFEKSRKVSGPRALQPSQWGMLC
Sbjct: 422  TGNFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLC 481

Query: 2277 PCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLVI 2098
            PCDTPEGEACGLVKNLALMTHVTTD+EE PLISL YCLGVEDLELLSGEELH PNSFLVI
Sbjct: 482  PCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVI 541

Query: 2097 FNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIAD 1918
            FNG ILGKHRRPQ F  ++R LRRAGKIGEFVSVF+NEKQR VY+ASDGGRVCRPLVIAD
Sbjct: 542  FNGLILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVIAD 601

Query: 1917 KGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEIE 1738
            +G+SRIKEHHMKEL DGVRTFDDFLR+GLIEYLDVNEENNAL+ALYE +ATPETTHIEIE
Sbjct: 602  RGVSRIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYEGEATPETTHIEIE 661

Query: 1737 PFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPLL 1558
            PFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+LLYLLVYPQ+PLL
Sbjct: 662  PFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLL 721

Query: 1557 TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAIIQ 1378
            TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMK+  AI Q
Sbjct: 722  TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYPAIRQ 781

Query: 1377 KYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMVTG 1198
            KYEN   DRI RP+R      R +VLD DG+AAPGEII+P+DIY+ K+ P  T G + + 
Sbjct: 782  KYENGASDRILRPDRT---VERERVLDYDGLAAPGEIIKPSDIYVKKECPIDTMGPVKSS 838

Query: 1197 LTDSDFKF--APQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRH 1024
                + K+  +P ++KGP GES V+D+VAL +D+NNN+CIK +IRHTRRPEVGDKFSSRH
Sbjct: 839  AALENIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRPEVGDKFSSRH 898

Query: 1023 GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 844
            GQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG
Sbjct: 899  GQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 958

Query: 843  SAFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 664
            SAFGEPSGHADTVEAIS TLV +GFSYNGKD IYSGITGCPLQAYIFMGPIYYQKLKHMV
Sbjct: 959  SAFGEPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLKHMV 1018

Query: 663  LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFE 484
            LDKMHARG+GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFE
Sbjct: 1019 LDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFE 1078

Query: 483  VQVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAE 304
            VQVCR CGLLGY+N KL+ GICS+CKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAE
Sbjct: 1079 VQVCRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAE 1138

Query: 303  A 301
            A
Sbjct: 1139 A 1139


>ref|XP_009758465.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            sylvestris] gi|698523320|ref|XP_009758466.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            sylvestris]
          Length = 1155

 Score = 1677 bits (4344), Expect = 0.0
 Identities = 821/1020 (80%), Positives = 919/1020 (90%), Gaps = 3/1020 (0%)
 Frame = -2

Query: 3351 KENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSKN 3172
            K+NV IGRMP+MLRSCCCVLYGKDE ELA+LGECPLDPGGYF+IKGTEKVILIQEQLSKN
Sbjct: 140  KKNVTIGRMPVMLRSCCCVLYGKDEEELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKN 199

Query: 3171 RIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGMES 2992
            RIIID DKKG + ASV            ++MEK K+YL L+ F TKVPIM+VMKAMGMES
Sbjct: 200  RIIIDTDKKGCVQASVTSSTEKTKSKTIVKMEKEKVYLELNMFKTKVPIMIVMKAMGMES 259

Query: 2991 DQEVVQMVGRDPRYSALLMPSIEECGK-DIHTKEQALDYLESKLKRSMYPPSAHAPNASS 2815
            DQEVVQM+GRDPR+SALL+PSIEEC    ++T++QAL++LES     M+  SA       
Sbjct: 260  DQEVVQMIGRDPRFSALLLPSIEECADLKVYTQQQALEFLESDKMLKMFSYSA----GPV 315

Query: 2814 EKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKRL 2635
            EK  R ++IL+D+FLANV VH++NFR KCIYV VM+RR+M+AILNKDA+DDKDYVGNKRL
Sbjct: 316  EKGARALSILRDIFLANVPVHKHNFRKKCIYVAVMMRRMMEAILNKDAMDDKDYVGNKRL 375

Query: 2634 ELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERALST 2455
            ELSGQL+SLLFEDLFKTM  + ++TVD++LA+PSRSSR D + +I +D+IT G+ER LST
Sbjct: 376  ELSGQLLSLLFEDLFKTMNDEARKTVDALLARPSRSSRLDISPYIAKDSITVGMERTLST 435

Query: 2454 GNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGMLCP 2275
            GNWDVKRF+M++KG+TQV+ RLS+IG+LGHMT+I+PQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 436  GNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 495

Query: 2274 CDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLVIF 2095
            CDTPEGEACGLVKNLALMTHVTTDE+E+P+ISL YCLGVEDLE LS EELH P+S+L+I 
Sbjct: 496  CDTPEGEACGLVKNLALMTHVTTDEDEQPIISLCYCLGVEDLEQLSAEELHMPSSYLIIL 555

Query: 2094 NGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIADK 1915
            NG ILGKHR PQRFA A+R LRRAGKIGEF+S+F+NEKQR VYIASDGGRVCRPLVIADK
Sbjct: 556  NGLILGKHRSPQRFANAMRKLRRAGKIGEFISIFVNEKQRSVYIASDGGRVCRPLVIADK 615

Query: 1914 GISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEIEP 1735
            G+SRIKE HMKEL DGVR FD FLR+GLIEYLDVNEENN+LIALYE +ATPETTHIEIEP
Sbjct: 616  GVSRIKEQHMKELRDGVRNFDSFLRDGLIEYLDVNEENNSLIALYEKEATPETTHIEIEP 675

Query: 1734 FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPLLT 1555
            FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTL+YLLVYPQ+PLLT
Sbjct: 676  FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLIYLLVYPQRPLLT 735

Query: 1554 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAIIQK 1375
            TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMK+ SA   K
Sbjct: 736  TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYSATCLK 795

Query: 1374 YENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMVT-- 1201
            YENNT DRI +P R G +A RMQ+LD+DG+A+PGEIIRP+DIYINK++P VTR  + +  
Sbjct: 796  YENNTSDRIIKPQRQGYEAERMQILDEDGLASPGEIIRPHDIYINKESPTVTRTPVSSPM 855

Query: 1200 GLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRHG 1021
             L DS +K + QT+KGP GE+ VVD+VAL +DKNNN+CIK++IRHTRRPE+GDKFSSRHG
Sbjct: 856  SLPDSAYKPSRQTYKGPEGETPVVDRVALHSDKNNNLCIKFMIRHTRRPEIGDKFSSRHG 915

Query: 1020 QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 841
            QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVSCGRFHYGS
Sbjct: 916  QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGS 975

Query: 840  AFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 661
            AFGEPSGHADTV+ IS TLV+ GFSYNGKDFIYSGITG PLQAYIFMGPIYYQKLKHMVL
Sbjct: 976  AFGEPSGHADTVDTISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVL 1035

Query: 660  DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEV 481
            DKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLMISSDPFEV
Sbjct: 1036 DKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEV 1095

Query: 480  QVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 301
            QVCR CGLLGYYN+KLKTGICS CKNG+NISTMKLPYACKLLIQELQSMNIVPRLKL+EA
Sbjct: 1096 QVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLIQELQSMNIVPRLKLSEA 1155


>ref|XP_010536382.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Tarenaya
            hassleriana]
          Length = 1150

 Score = 1677 bits (4343), Expect = 0.0
 Identities = 823/1021 (80%), Positives = 924/1021 (90%), Gaps = 3/1021 (0%)
 Frame = -2

Query: 3354 QKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 3175
            +++NV+IGRMPIMLRS  CVLYGKDE ELARLGECPLDPGGYF+IKGTEKV+LIQEQLSK
Sbjct: 137  KRDNVMIGRMPIMLRSQRCVLYGKDEQELARLGECPLDPGGYFVIKGTEKVLLIQEQLSK 196

Query: 3174 NRIIIDMDKKGNINASVXXXXXXXXXXXXIQMEKGKLYLILSQFSTKVPIMVVMKAMGME 2995
            NRIIID DKKGNINASV            IQMEK K+YL L QF  K+PI++V+KAMGME
Sbjct: 197  NRIIIDTDKKGNINASVTSSTELTKSKTVIQMEKEKVYLFLHQFVKKIPIIIVLKAMGME 256

Query: 2994 SDQEVVQMVGRDPRYSALLMPSIEEC-GKDIHTKEQALDYLESKLKRSMYPPSAHAPNAS 2818
            SDQE+VQMVGRDPR+SA L+PSIEEC  + ++T++QALDYLE+K+K++ Y P A      
Sbjct: 257  SDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTRKQALDYLEAKVKKTSYGPPA------ 310

Query: 2817 SEKPGRVMTILKDVFLANVRVHQNNFRPKCIYVGVMLRRIMDAILNKDAIDDKDYVGNKR 2638
             EK GR ++IL+DVFLA+V VH NNFRPKC+YVG+MLRR+++A+LNKDA+DDKDYVGNKR
Sbjct: 311  -EKEGRALSILRDVFLAHVPVHSNNFRPKCLYVGIMLRRMIEAMLNKDAMDDKDYVGNKR 369

Query: 2637 LELSGQLISLLFEDLFKTMITDVKRTVDSILAKPSRSSRFDFAQWIVRDNITNGLERALS 2458
            LELSGQLISLLFEDLFKTMI++ K+  D+IL +PSRSSRFDF Q+I RD+IT GLER LS
Sbjct: 370  LELSGQLISLLFEDLFKTMISETKKNADNILQRPSRSSRFDFLQYINRDSITFGLERTLS 429

Query: 2457 TGNWDVKRFKMNKKGVTQVLGRLSFIGTLGHMTRINPQFEKSRKVSGPRALQPSQWGMLC 2278
            TGN+D+KRF+M++KG+TQVL RLSFIG++GH+TRI+PQFEKSRKVSGPR+LQPSQWGMLC
Sbjct: 430  TGNFDIKRFRMHRKGMTQVLQRLSFIGSMGHVTRISPQFEKSRKVSGPRSLQPSQWGMLC 489

Query: 2277 PCDTPEGEACGLVKNLALMTHVTTDEEEEPLISLFYCLGVEDLELLSGEELHAPNSFLVI 2098
            PCDTPEGEACGLVKNLALMTHVTTDEEE PL+S+ Y LGV DLE  S EELH P+SFLVI
Sbjct: 490  PCDTPEGEACGLVKNLALMTHVTTDEEEGPLVSMCYKLGVMDLEASSAEELHTPDSFLVI 549

Query: 2097 FNGHILGKHRRPQRFATAIRMLRRAGKIGEFVSVFLNEKQRCVYIASDGGRVCRPLVIAD 1918
            FNG ILGKH RPQ FA ++R LRRAGKIGEFVSVFLNEKQ CVY+ASDGGRVCRPLVIAD
Sbjct: 550  FNGLILGKHGRPQFFADSLRKLRRAGKIGEFVSVFLNEKQYCVYVASDGGRVCRPLVIAD 609

Query: 1917 KGISRIKEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEADATPETTHIEIE 1738
            KG+SR+K++HMKEL DGVR FDDF+R+GLIEYLDVNEENNALIALYE++ TP+TTHIEIE
Sbjct: 610  KGVSRVKQYHMKELQDGVRNFDDFIRDGLIEYLDVNEENNALIALYESETTPDTTHIEIE 669

Query: 1737 PFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQKPLL 1558
            PFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMD+LLYLLVYPQ+PLL
Sbjct: 670  PFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDSLLYLLVYPQRPLL 729

Query: 1557 TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKRLSAIIQ 1378
            TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMK+ SA  Q
Sbjct: 730  TTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYSATSQ 789

Query: 1377 KYENNTQDRIARPNRAGNDAGRMQVLDDDGIAAPGEIIRPNDIYINKQTPRVTRGTMVT- 1201
            KYENNTQDRI RP + G+DA +MQ+LDDDGIA PGEIIRPNDIY NK+ P  TRG + + 
Sbjct: 790  KYENNTQDRILRPQKTGHDAEKMQILDDDGIATPGEIIRPNDIYFNKEVPIQTRGPVPSP 849

Query: 1200 -GLTDSDFKFAPQTFKGPIGESSVVDKVALFTDKNNNMCIKYLIRHTRRPEVGDKFSSRH 1024
              L+DS ++ A + +KG  GE+ VVD+VAL +D+NNNMCIK+LIRHTRRPE+GDKFSSRH
Sbjct: 850  MALSDSHYRPAREFWKGHEGETQVVDRVALCSDRNNNMCIKFLIRHTRRPELGDKFSSRH 909

Query: 1023 GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 844
            GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG
Sbjct: 910  GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 969

Query: 843  SAFGEPSGHADTVEAISHTLVEKGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 664
            SAFGEPSGHAD VE IS TLV+ GFSY+GKD IYSGITGCPLQAYIFMGPIYYQKLKHMV
Sbjct: 970  SAFGEPSGHADKVENISETLVKHGFSYSGKDLIYSGITGCPLQAYIFMGPIYYQKLKHMV 1029

Query: 663  LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFE 484
            LDKMHARGSGPRVM+TRQPTEGRARNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFE
Sbjct: 1030 LDKMHARGSGPRVMMTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMVSSDPFE 1089

Query: 483  VQVCRACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAE 304
            VQVCRACGLLGYYN+KLK G+C++CKNG+NISTMKLPYACKLL+QELQSMNIVPRL+LAE
Sbjct: 1090 VQVCRACGLLGYYNYKLKAGVCTTCKNGENISTMKLPYACKLLLQELQSMNIVPRLRLAE 1149

Query: 303  A 301
            A
Sbjct: 1150 A 1150