BLASTX nr result
ID: Ziziphus21_contig00004312
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ziziphus21_contig00004312
(3032 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008220676.1| PREDICTED: DNA-directed RNA polymerases IV a... 1545 0.0
ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun... 1544 0.0
ref|XP_008220675.1| PREDICTED: DNA-directed RNA polymerases IV a... 1536 0.0
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob... 1532 0.0
ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theob... 1526 0.0
ref|XP_008379016.1| PREDICTED: DNA-directed RNA polymerases IV a... 1520 0.0
ref|XP_009363651.1| PREDICTED: DNA-directed RNA polymerases IV a... 1517 0.0
ref|XP_009347298.1| PREDICTED: DNA-directed RNA polymerases IV a... 1515 0.0
ref|XP_008357267.1| PREDICTED: DNA-directed RNA polymerases IV a... 1513 0.0
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerases IV a... 1511 0.0
ref|XP_011036682.1| PREDICTED: DNA-directed RNA polymerases IV a... 1503 0.0
ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV a... 1485 0.0
ref|XP_010101029.1| DNA-directed RNA polymerase D subunit 2a [Mo... 1483 0.0
ref|XP_008452849.1| PREDICTED: DNA-directed RNA polymerases IV a... 1483 0.0
gb|KHG03399.1| DNA-directed RNA polymerase D subunit 2a -like pr... 1483 0.0
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 1482 0.0
ref|XP_012452401.1| PREDICTED: DNA-directed RNA polymerase D sub... 1479 0.0
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [... 1478 0.0
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerases IV a... 1477 0.0
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV a... 1475 0.0
>ref|XP_008220676.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
isoform X2 [Prunus mume]
Length = 1200
Score = 1545 bits (4000), Expect = 0.0
Identities = 753/962 (78%), Positives = 838/962 (87%), Gaps = 8/962 (0%)
Frame = -3
Query: 3027 CKKRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWIL 2860
C KRL I+NNQ L VAY+SE+KR+RLIIRL + G EKVLTVYF+STEIPVWI
Sbjct: 242 CLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWIW 301
Query: 2859 FFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEH----FRGGKNALSFVDKR 2692
FF+LG+S DREVM+LIDY++ DASISNILFASI DA++ + FR GKNAL +VD+
Sbjct: 302 FFALGVSSDREVMNLIDYDSEDASISNILFASIRDADKLNDKVDGGFRRGKNALKYVDEV 361
Query: 2691 IKRTTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNK 2512
I++T FPPGE++E+CI YLFPNLKGLKQKARFLGYMVK LLQA++GRRKC+NRDDF+NK
Sbjct: 362 IRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMVKSLLQAYAGRRKCDNRDDFRNK 421
Query: 2511 XXXXXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFST 2332
LKAH+ HARRRMAKALQRDLY DR V PIEHYLDASI+TNG+SRAFST
Sbjct: 422 RLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFST 481
Query: 2331 GAWCHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVC 2152
GAWCHP+KRMER+SGVVATVGRANPLQTM+DMR+TRQQVQYTGKVGDARYPHPSHWGKVC
Sbjct: 482 GAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKVC 541
Query: 2151 FLSTPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNG 1972
FLSTPDGENCGLVKNLATTGLVSTNVL+ ++ ++ CGMEKLVDDTFT L GKDKVFLNG
Sbjct: 542 FLSTPDGENCGLVKNLATTGLVSTNVLESLIPQLLTCGMEKLVDDTFTSLRGKDKVFLNG 601
Query: 1971 EWVGVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLR 1792
+WVGVC+DSL+FV+ LPHQVEIKR+ GEV I+SDAGRILRPLLVVENL
Sbjct: 602 DWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKRDVHQGEVRIFSDAGRILRPLLVVENLN 661
Query: 1791 KIKSLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDM 1612
K+KS K GK +F+ LD GI+ELIGAEEEEDC AW +KYLFMED G S K+THCELDM
Sbjct: 662 KVKSSKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIKYLFMEDKGKSAAKFTHCELDM 721
Query: 1611 SFLLGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLF 1432
SFLLGLSCGI+P+ANHDHARRVLYQ+QKH QQAIGFSTTNPN+RVDTLSHQLHYPQ+PLF
Sbjct: 722 SFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTTNPNLRVDTLSHQLHYPQRPLF 781
Query: 1431 RTMTSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMF 1252
+TMTSDCLGKP H +PKPE+YNGQNAIVAVNVHLG+NQEDSIVMNR+SLERGMF
Sbjct: 782 QTMTSDCLGKPGR---HNRIVPKPEYYNGQNAIVAVNVHLGFNQEDSIVMNRASLERGMF 838
Query: 1251 RSEHIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDI 1072
RSEHIRSYKAEVDNKES DKRRK DDC+NFGK+QSK GRVDSLDDDGFP+VGANLQSGDI
Sbjct: 839 RSEHIRSYKAEVDNKESLDKRRKPDDCVNFGKMQSKFGRVDSLDDDGFPYVGANLQSGDI 898
Query: 1071 VIGRCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG 892
+IGRC++SGADHS+KLKHTERG VQKV+LSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG
Sbjct: 899 IIGRCSESGADHSIKLKHTERGMVQKVLLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG 958
Query: 891 QKGVLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHAT 712
QKGVLGFLE QENFPFT+QG+VPDIVINPHAFPSRQTPGQ ++AT
Sbjct: 959 QKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYAT 1018
Query: 711 PFSTLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKF 532
PFSTLSVDDIT QLH AGFS+WGNERVY+G TG M+RSLIFMGPTFYQRL+HMSEDKVKF
Sbjct: 1019 PFSTLSVDDITDQLHSAGFSRWGNERVYNGATGAMVRSLIFMGPTFYQRLIHMSEDKVKF 1078
Query: 531 RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQK 352
RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSDSSQM++CQK
Sbjct: 1079 RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQK 1138
Query: 351 CKNVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQ 172
CKNVA VI R + GGRKIRGP+CR C+S DD+V+ NVPYGAKLLCQELFSMGISLKFET+
Sbjct: 1139 CKNVAYVILRTVAGGRKIRGPHCRICDSADDLVRVNVPYGAKLLCQELFSMGISLKFETR 1198
Query: 171 LC 166
C
Sbjct: 1199 FC 1200
>ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
gi|462422378|gb|EMJ26641.1| hypothetical protein
PRUPE_ppa000410mg [Prunus persica]
Length = 1200
Score = 1544 bits (3997), Expect = 0.0
Identities = 752/962 (78%), Positives = 838/962 (87%), Gaps = 8/962 (0%)
Frame = -3
Query: 3027 CKKRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWIL 2860
C KRL I+NNQ L VAY+SE+KR+RLIIRL + G EKVLTVYF+STEIPVWI
Sbjct: 242 CLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWIW 301
Query: 2859 FFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEH----FRGGKNALSFVDKR 2692
FF+LG+S DREVM+LIDY++ DASISNILFASI DA++ + FR GKNAL +VD+
Sbjct: 302 FFALGVSSDREVMNLIDYDSEDASISNILFASIRDADKLNDKVDGGFRRGKNALKYVDEV 361
Query: 2691 IKRTTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNK 2512
I++T FPPGE++E+CI YLFPNLKGLKQKARFLGYMVK LLQA++GRRKC+NRDDF+NK
Sbjct: 362 IRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMVKSLLQAYAGRRKCDNRDDFRNK 421
Query: 2511 XXXXXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFST 2332
LKAH+ HARRRMAKALQRDLY DR V PIEHYLDASI+TNG+SRAFST
Sbjct: 422 RLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFST 481
Query: 2331 GAWCHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVC 2152
GAWCHP+KRMER+SGVVATVGRANPLQTM+DMR+TRQQVQYTGKVGDARYPHPSHWGKVC
Sbjct: 482 GAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKVC 541
Query: 2151 FLSTPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNG 1972
FLSTPDGENCGLVKNLATTGLVSTNVL+ ++ ++ CGMEKLVDDTFT L GKDKVFLNG
Sbjct: 542 FLSTPDGENCGLVKNLATTGLVSTNVLESLIPQLLTCGMEKLVDDTFTSLRGKDKVFLNG 601
Query: 1971 EWVGVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLR 1792
+WVGVC+DSL+FV+ LPHQVEIKR+ GEV I+SDAGRILRPLLVVENL
Sbjct: 602 DWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKRDVHQGEVRIFSDAGRILRPLLVVENLN 661
Query: 1791 KIKSLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDM 1612
K+K+ K GK +F+ LD GI+ELIGAEEEEDC AW +KYLFMED G S K+THCELDM
Sbjct: 662 KVKASKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIKYLFMEDKGKSATKFTHCELDM 721
Query: 1611 SFLLGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLF 1432
SFLLGLSCGI+P+ANHDHARRVLYQ+QKH QQAIGFSTTNPN+RVDTLSHQLHYPQ+PLF
Sbjct: 722 SFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTTNPNLRVDTLSHQLHYPQRPLF 781
Query: 1431 RTMTSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMF 1252
+TMTSDCLGKP H +PKPE+YNGQNAIVAVNVHLG+NQEDSIVMNR+SLERGMF
Sbjct: 782 QTMTSDCLGKPGR---HNRIVPKPEYYNGQNAIVAVNVHLGFNQEDSIVMNRASLERGMF 838
Query: 1251 RSEHIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDI 1072
RSEHIRSYKAEVDNKES DKRRK DDC+NFGK+QSK GRVDSLDDDGFP+VGANLQSGDI
Sbjct: 839 RSEHIRSYKAEVDNKESLDKRRKPDDCVNFGKMQSKFGRVDSLDDDGFPYVGANLQSGDI 898
Query: 1071 VIGRCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG 892
+IGRC++SGADHS+KLKHTERG VQKV+LSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG
Sbjct: 899 IIGRCSESGADHSIKLKHTERGMVQKVLLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG 958
Query: 891 QKGVLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHAT 712
QKGVLGFLE QENFPFT+QG+VPDIVINPHAFPSRQTPGQ ++AT
Sbjct: 959 QKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYAT 1018
Query: 711 PFSTLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKF 532
PFSTLSVDDIT QLH AGFS+WGNERVY+G TG M+RSLIFMGPTFYQRL+HMSEDKVKF
Sbjct: 1019 PFSTLSVDDITDQLHSAGFSRWGNERVYNGATGAMVRSLIFMGPTFYQRLIHMSEDKVKF 1078
Query: 531 RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQK 352
RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSDSSQM++CQK
Sbjct: 1079 RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQK 1138
Query: 351 CKNVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQ 172
CKNVA VI R + GGRKIRGP+CR C+S DD+V+ NVPYGAKLLCQELFSMGISLKFET+
Sbjct: 1139 CKNVAYVILRTVAGGRKIRGPHCRICDSADDLVRVNVPYGAKLLCQELFSMGISLKFETR 1198
Query: 171 LC 166
C
Sbjct: 1199 FC 1200
>ref|XP_008220675.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
isoform X1 [Prunus mume]
Length = 1212
Score = 1536 bits (3977), Expect = 0.0
Identities = 753/974 (77%), Positives = 838/974 (86%), Gaps = 20/974 (2%)
Frame = -3
Query: 3027 CKKRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWIL 2860
C KRL I+NNQ L VAY+SE+KR+RLIIRL + G EKVLTVYF+STEIPVWI
Sbjct: 242 CLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWIW 301
Query: 2859 FFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEH----FRGGKNALSFVDKR 2692
FF+LG+S DREVM+LIDY++ DASISNILFASI DA++ + FR GKNAL +VD+
Sbjct: 302 FFALGVSSDREVMNLIDYDSEDASISNILFASIRDADKLNDKVDGGFRRGKNALKYVDEV 361
Query: 2691 IKRTTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNK 2512
I++T FPPGE++E+CI YLFPNLKGLKQKARFLGYMVK LLQA++GRRKC+NRDDF+NK
Sbjct: 362 IRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMVKSLLQAYAGRRKCDNRDDFRNK 421
Query: 2511 XXXXXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFST 2332
LKAH+ HARRRMAKALQRDLY DR V PIEHYLDASI+TNG+SRAFST
Sbjct: 422 RLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFST 481
Query: 2331 GAWCHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVC 2152
GAWCHP+KRMER+SGVVATVGRANPLQTM+DMR+TRQQVQYTGKVGDARYPHPSHWGKVC
Sbjct: 482 GAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKVC 541
Query: 2151 FLSTPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNG 1972
FLSTPDGENCGLVKNLATTGLVSTNVL+ ++ ++ CGMEKLVDDTFT L GKDKVFLNG
Sbjct: 542 FLSTPDGENCGLVKNLATTGLVSTNVLESLIPQLLTCGMEKLVDDTFTSLRGKDKVFLNG 601
Query: 1971 EWVGVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLR 1792
+WVGVC+DSL+FV+ LPHQVEIKR+ GEV I+SDAGRILRPLLVVENL
Sbjct: 602 DWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKRDVHQGEVRIFSDAGRILRPLLVVENLN 661
Query: 1791 KIKSLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDM 1612
K+KS K GK +F+ LD GI+ELIGAEEEEDC AW +KYLFMED G S K+THCELDM
Sbjct: 662 KVKSSKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIKYLFMEDKGKSAAKFTHCELDM 721
Query: 1611 SFLLGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLF 1432
SFLLGLSCGI+P+ANHDHARRVLYQ+QKH QQAIGFSTTNPN+RVDTLSHQLHYPQ+PLF
Sbjct: 722 SFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTTNPNLRVDTLSHQLHYPQRPLF 781
Query: 1431 RTMTSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMF 1252
+TMTSDCLGKP H +PKPE+YNGQNAIVAVNVHLG+NQEDSIVMNR+SLERGMF
Sbjct: 782 QTMTSDCLGKPGR---HNRIVPKPEYYNGQNAIVAVNVHLGFNQEDSIVMNRASLERGMF 838
Query: 1251 RSEHIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDI 1072
RSEHIRSYKAEVDNKES DKRRK DDC+NFGK+QSK GRVDSLDDDGFP+VGANLQSGDI
Sbjct: 839 RSEHIRSYKAEVDNKESLDKRRKPDDCVNFGKMQSKFGRVDSLDDDGFPYVGANLQSGDI 898
Query: 1071 VIGRCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG 892
+IGRC++SGADHS+KLKHTERG VQKV+LSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG
Sbjct: 899 IIGRCSESGADHSIKLKHTERGMVQKVLLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG 958
Query: 891 QKGVLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHAT 712
QKGVLGFLE QENFPFT+QG+VPDIVINPHAFPSRQTPGQ ++AT
Sbjct: 959 QKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYAT 1018
Query: 711 PFSTLSVDDITAQLHR------------AGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQ 568
PFSTLSVDDIT QLH AGFS+WGNERVY+G TG M+RSLIFMGPTFYQ
Sbjct: 1019 PFSTLSVDDITDQLHSYRLLFKLNVVGCAGFSRWGNERVYNGATGAMVRSLIFMGPTFYQ 1078
Query: 567 RLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFT 388
RL+HMSEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFT
Sbjct: 1079 RLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFT 1138
Query: 387 LSDSSQMYICQKCKNVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQEL 208
LSDSSQM++CQKCKNVA VI R + GGRKIRGP+CR C+S DD+V+ NVPYGAKLLCQEL
Sbjct: 1139 LSDSSQMHVCQKCKNVAYVILRTVAGGRKIRGPHCRICDSADDLVRVNVPYGAKLLCQEL 1198
Query: 207 FSMGISLKFETQLC 166
FSMGISLKFET+ C
Sbjct: 1199 FSMGISLKFETRFC 1212
>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 1184
Score = 1532 bits (3967), Expect = 0.0
Identities = 737/959 (76%), Positives = 830/959 (86%), Gaps = 4/959 (0%)
Frame = -3
Query: 3030 ICKKRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWI 2863
I KRLWISN+Q +AY+SE+KRNRLIIRL ++ +GGEKVLTVYFLSTEIPVW+
Sbjct: 226 ISMKRLWISNSQGWTIAYRSEVKRNRLIIRLVENSKVEYIKGGEKVLTVYFLSTEIPVWV 285
Query: 2862 LFFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEHFRGGKNALSFVDKRIKR 2683
LFF+LG+S D+EV++LIDYE+ D+SI+NILFASI +A+ C F G+NA+ +V K +K
Sbjct: 286 LFFALGVSSDKEVVNLIDYESNDSSITNILFASIRNADGKCYKFCQGRNAIDYVGKLVKD 345
Query: 2682 TTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNKXXX 2503
T FPP E IE+C+ YLFP L+ KQKARFLGYMVKCLLQA++GR KC+NRDDF+NK
Sbjct: 346 TRFPPEEGIEECLSTYLFPTLRSFKQKARFLGYMVKCLLQAYTGRLKCDNRDDFRNKRLE 405
Query: 2502 XXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFSTGAW 2323
LK H++HARRRMAK LQRDLYADRTV PIEHYLDASI+TNGLSRAFSTGAW
Sbjct: 406 LAGELLERELKVHIAHARRRMAKTLQRDLYADRTVRPIEHYLDASIVTNGLSRAFSTGAW 465
Query: 2322 CHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS 2143
HPYKRMERISGVVA +GRANPLQTM+D+R+TRQQVQYTGKVGDARYPHPSHWGKVCFLS
Sbjct: 466 SHPYKRMERISGVVANLGRANPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGKVCFLS 525
Query: 2142 TPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNGEWV 1963
TPDGENCGLVKNLATTGLVSTN+++ I+ +++ GME+LV+DT + L GKDKVFLNGEWV
Sbjct: 526 TPDGENCGLVKNLATTGLVSTNIMESIVDKLFDSGMEELVNDTCSSLDGKDKVFLNGEWV 585
Query: 1962 GVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLRKIK 1783
GVC+DSL+F PHQVEIKR+ GEV I+SD GRILRPLLVV+NL +IK
Sbjct: 586 GVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHKGEVRIFSDGGRILRPLLVVDNLNRIK 645
Query: 1782 SLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDMSFL 1603
+ K YTF+ LL+ GI+EL+G EEEEDCR AW +KYL + G +KYTHCELDMSFL
Sbjct: 646 AFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQPVKYTHCELDMSFL 705
Query: 1602 LGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTM 1423
LGLSCGI+PFANHDHARRVLYQ+QKH QQAIGFSTTNPNIRVDTLSHQL+YPQ+PLFRTM
Sbjct: 706 LGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTM 765
Query: 1422 TSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMFRSE 1243
TSDCLGK PLG KG +PKPE YNGQNAIVAVNVHLGYNQEDS+VMNRSSLERGMFRSE
Sbjct: 766 TSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSE 825
Query: 1242 HIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDIVIG 1063
H+RSYKAEVDNKE DKRRK++D +NFGK+QSKIGRVDSLDDDGFP+VGANLQ GDIVIG
Sbjct: 826 HVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQSKIGRVDSLDDDGFPYVGANLQCGDIVIG 885
Query: 1062 RCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKG 883
RCA+SGADHS+KLKHTERG VQKVVLSSNDDGKN+AVVSLRQVRSPCLGDKFSSMHGQKG
Sbjct: 886 RCAESGADHSIKLKHTERGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKG 945
Query: 882 VLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHATPFS 703
VLGFLE QENFPFT QGIVPDIVINPHAFPSRQTPGQ MK+ATPFS
Sbjct: 946 VLGFLESQENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSMKYATPFS 1005
Query: 702 TLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKFRNT 523
T+SVD IT QLHRAGFS+WGNERVY+G TGEM+RSLIFMGPTFYQRL+HM+EDKVKFRNT
Sbjct: 1006 TISVDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNT 1065
Query: 522 GPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQKCKN 343
GPVHPLTRQPVADRKR+GG+KFGEMERDCL+AHGASANLHERL TLSDSSQM++C+ CKN
Sbjct: 1066 GPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCKN 1125
Query: 342 VANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQLC 166
VANVI+RA+PGGRKIRGPYCR C+SVDDIV+ NVPYGAKLLCQELFSMGI+LKFETQLC
Sbjct: 1126 VANVIERAVPGGRKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1184
>ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
gi|508782081|gb|EOY29337.1| DNA-directed RNA polymerase
isoform 2 [Theobroma cacao]
Length = 961
Score = 1526 bits (3950), Expect = 0.0
Identities = 736/960 (76%), Positives = 829/960 (86%), Gaps = 8/960 (0%)
Frame = -3
Query: 3021 KRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWILFF 2854
KRLWISN+Q +AY+SE+KRNRLIIRL ++ +GGEKVLTVYFLSTEIPVW+LFF
Sbjct: 2 KRLWISNSQGWTIAYRSEVKRNRLIIRLVENSKVEYIKGGEKVLTVYFLSTEIPVWVLFF 61
Query: 2853 SLGISCDREVMDLIDYENPDASISNILFASIHDANENCEHFRGGKNALSFVDKRIKRTTF 2674
+LG+S D+EV++LIDYE+ D+SI+NILFASI +A+ C F G+NA+ +V K +K T F
Sbjct: 62 ALGVSSDKEVVNLIDYESNDSSITNILFASIRNADGKCYKFCQGRNAIDYVGKLVKDTRF 121
Query: 2673 PPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNKXXXXXX 2494
PP E IE+C+ YLFP L+ KQKARFLGYMVKCLLQA++GR KC+NRDDF+NK
Sbjct: 122 PPEEGIEECLSTYLFPTLRSFKQKARFLGYMVKCLLQAYTGRLKCDNRDDFRNKRLELAG 181
Query: 2493 XXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFSTGAWCHP 2314
LK H++HARRRMAK LQRDLYADRTV PIEHYLDASI+TNGLSRAFSTGAW HP
Sbjct: 182 ELLERELKVHIAHARRRMAKTLQRDLYADRTVRPIEHYLDASIVTNGLSRAFSTGAWSHP 241
Query: 2313 YKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPD 2134
YKRMERISGVVA +GRANPLQTM+D+R+TRQQVQYTGKVGDARYPHPSHWGKVCFLSTPD
Sbjct: 242 YKRMERISGVVANLGRANPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPD 301
Query: 2133 GENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNGEWVGVC 1954
GENCGLVKNLATTGLVSTN+++ I+ +++ GME+LV+DT + L GKDKVFLNGEWVGVC
Sbjct: 302 GENCGLVKNLATTGLVSTNIMESIVDKLFDSGMEELVNDTCSSLDGKDKVFLNGEWVGVC 361
Query: 1953 DDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLRKIKSLK 1774
+DSL+F PHQVEIKR+ GEV I+SD GRILRPLLVV+NL +IK+ K
Sbjct: 362 EDSLSFAAEVRRKRRSKEFPHQVEIKRDEHKGEVRIFSDGGRILRPLLVVDNLNRIKAFK 421
Query: 1773 EGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDMSFLLGL 1594
YTF+ LL+ GI+EL+G EEEEDCR AW +KYL + G +KYTHCELDMSFLLGL
Sbjct: 422 GENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQPVKYTHCELDMSFLLGL 481
Query: 1593 SCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTMTSD 1414
SCGI+PFANHDHARRVLYQ+QKH QQAIGFSTTNPNIRVDTLSHQL+YPQ+PLFRTMTSD
Sbjct: 482 SCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMTSD 541
Query: 1413 CLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMFRSEHIR 1234
CLGK PLG KG +PKPE YNGQNAIVAVNVHLGYNQEDS+VMNRSSLERGMFRSEH+R
Sbjct: 542 CLGKLGHPLGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEHVR 601
Query: 1233 SYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDIVIGRCA 1054
SYKAEVDNKE DKRRK++D +NFGK+QSKIGRVDSLDDDGFP+VGANLQ GDIVIGRCA
Sbjct: 602 SYKAEVDNKEIQDKRRKSEDIVNFGKIQSKIGRVDSLDDDGFPYVGANLQCGDIVIGRCA 661
Query: 1053 DSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLG 874
+SGADHS+KLKHTERG VQKVVLSSNDDGKN+AVVSLRQVRSPCLGDKFSSMHGQKGVLG
Sbjct: 662 ESGADHSIKLKHTERGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLG 721
Query: 873 FLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHATPFSTLS 694
FLE QENFPFT QGIVPDIVINPHAFPSRQTPGQ MK+ATPFST+S
Sbjct: 722 FLESQENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSMKYATPFSTIS 781
Query: 693 VDDITAQL----HRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKFRN 526
VD IT QL HRAGFS+WGNERVY+G TGEM+RSLIFMGPTFYQRL+HM+EDKVKFRN
Sbjct: 782 VDAITEQLHSICHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRN 841
Query: 525 TGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQKCK 346
TGPVHPLTRQPVADRKR+GG+KFGEMERDCL+AHGASANLHERL TLSDSSQM++C+ CK
Sbjct: 842 TGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCK 901
Query: 345 NVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQLC 166
NVANVI+RA+PGGRKIRGPYCR C+SVDDIV+ NVPYGAKLLCQELFSMGI+LKFETQLC
Sbjct: 902 NVANVIERAVPGGRKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 961
>ref|XP_008379016.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Malus domestica] gi|657945275|ref|XP_008379020.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
2-like [Malus domestica]
Length = 1203
Score = 1520 bits (3935), Expect = 0.0
Identities = 747/960 (77%), Positives = 828/960 (86%), Gaps = 8/960 (0%)
Frame = -3
Query: 3027 CKKRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWIL 2860
C K+L I+NNQ L VAY+SE+KR+RLIIRL + G EKVLTVYF+STEIPVW+
Sbjct: 242 CLKKLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWVW 301
Query: 2859 FFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEH----FRGGKNALSFVDKR 2692
FF+LG+S DREV+DLIDY + DASI NILFASI DA++ E FR GKNAL +VD
Sbjct: 302 FFALGVSSDREVIDLIDYGSEDASILNILFASIRDADKATEKVDGGFRRGKNALKYVDDV 361
Query: 2691 IKRTTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNK 2512
IK+T FPPGE+IE+CI YLFPNL+GLKQKARFLGYMVK LLQA +GRRKC+NRDDF+NK
Sbjct: 362 IKKTAFPPGESIEECISLYLFPNLRGLKQKARFLGYMVKSLLQASAGRRKCDNRDDFRNK 421
Query: 2511 XXXXXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFST 2332
LKAH+ HARRRMAKALQRDLY DR V PIEHYLDASI+TNG+SRAFST
Sbjct: 422 RLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRVVRPIEHYLDASIVTNGISRAFST 481
Query: 2331 GAWCHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVC 2152
GAWCHP+KRMER+SGVVA VGRANPLQTMIDMR+TRQQVQYTGKVGDARYPHPSHWGKVC
Sbjct: 482 GAWCHPFKRMERMSGVVANVGRANPLQTMIDMRKTRQQVQYTGKVGDARYPHPSHWGKVC 541
Query: 2151 FLSTPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNG 1972
FLSTPDGENCGLVKNLATTGLVSTNVL+ +L E+ CGMEKLVDDT T L GK KVFLNG
Sbjct: 542 FLSTPDGENCGLVKNLATTGLVSTNVLESLLPELSLCGMEKLVDDTSTSLQGKLKVFLNG 601
Query: 1971 EWVGVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLR 1792
+WVGVC+DSL+FV LP QVEIKR+ + GEV +YSDAGRILRPLLVVENL
Sbjct: 602 DWVGVCEDSLSFVSELRRMRRRKKLPPQVEIKRDEKQGEVRVYSDAGRILRPLLVVENLN 661
Query: 1791 KIKSLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDM 1612
KIK+ K GKY F+ LDKGI++LIGAEEEEDC AW +KYLFME+ G S +KYTHCELDM
Sbjct: 662 KIKAFKGGKYPFQYFLDKGIIDLIGAEEEEDCSTAWGIKYLFMEEKGKSAVKYTHCELDM 721
Query: 1611 SFLLGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLF 1432
SFLLGLSC I+PFANHDHARRVLYQ+QKH QAIGFSTTNPN+RVDTLSHQLHYPQ+PLF
Sbjct: 722 SFLLGLSCSIIPFANHDHARRVLYQAQKHSAQAIGFSTTNPNLRVDTLSHQLHYPQRPLF 781
Query: 1431 RTMTSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMF 1252
+T S CLGKP LG +PKPE +NGQNAIVAVNVHLG+NQEDSIVMNR+SLERGMF
Sbjct: 782 QTXXSXCLGKPGHQLGQNRVLPKPELHNGQNAIVAVNVHLGFNQEDSIVMNRASLERGMF 841
Query: 1251 RSEHIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDI 1072
RSEHIRSYKAEVDNK+S +KRRK DDC+NFGK+QSK GRVD+LD+DGFP+VGANLQSGDI
Sbjct: 842 RSEHIRSYKAEVDNKDSLEKRRKPDDCVNFGKMQSKFGRVDNLDEDGFPYVGANLQSGDI 901
Query: 1071 VIGRCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG 892
+IGRC++SGADHS+KLKHTERG VQKVVLSSNDDGKNFAVVS+RQVRSPCLGDKFSSMHG
Sbjct: 902 IIGRCSESGADHSIKLKHTERGMVQKVVLSSNDDGKNFAVVSMRQVRSPCLGDKFSSMHG 961
Query: 891 QKGVLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHAT 712
QKGVLGFLE QENFPFTVQGIVPDIVINPHAFPSRQTPGQ ++AT
Sbjct: 962 QKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGQKRYAT 1021
Query: 711 PFSTLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKF 532
PFSTLSVDDI QLHRAGFS+ G ERVYSG TG+M+RSLIFMGPTFYQRL+HMSEDKVKF
Sbjct: 1022 PFSTLSVDDIAKQLHRAGFSRCGKERVYSGGTGQMVRSLIFMGPTFYQRLIHMSEDKVKF 1081
Query: 531 RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQK 352
RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSDSSQ+YICQK
Sbjct: 1082 RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQVYICQK 1141
Query: 351 CKNVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQ 172
C++VANVIQR++ GGRKIRGPYCR C S DD+VKANVPYGAKLLCQELFSMGISLK+ET+
Sbjct: 1142 CEHVANVIQRSVEGGRKIRGPYCRNCNSADDLVKANVPYGAKLLCQELFSMGISLKYETR 1201
>ref|XP_009363651.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Pyrus x bretschneideri] gi|694312758|ref|XP_009363658.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
2-like [Pyrus x bretschneideri]
gi|694312760|ref|XP_009363667.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Pyrus x
bretschneideri] gi|694312763|ref|XP_009363676.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
2-like [Pyrus x bretschneideri]
Length = 1203
Score = 1517 bits (3927), Expect = 0.0
Identities = 747/960 (77%), Positives = 826/960 (86%), Gaps = 8/960 (0%)
Frame = -3
Query: 3027 CKKRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWIL 2860
C K+L I+NNQ L VAY+SE+KR+RLIIRL + G EKVLTVYF+STEIPVW+
Sbjct: 242 CLKKLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWVW 301
Query: 2859 FFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEH----FRGGKNALSFVDKR 2692
FF+LG+S DREV+DLIDY + DASI NILFASI DA++ E FR GKNAL +VD
Sbjct: 302 FFALGVSSDREVIDLIDYGSEDASILNILFASIRDADKATEKVDGGFRRGKNALKYVDDV 361
Query: 2691 IKRTTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNK 2512
IK+T FPPGE+IE+CI YLFPNL+GLKQKARFLGYMVK LLQA +GRRKC+NRDDF+NK
Sbjct: 362 IKKTAFPPGESIEECISLYLFPNLRGLKQKARFLGYMVKSLLQASAGRRKCDNRDDFRNK 421
Query: 2511 XXXXXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFST 2332
LKAH+ HARR MAKALQRDLY DR V PIEHYLDASI+TNG+SRAFST
Sbjct: 422 RLDLAGELLERELKAHIGHARRGMAKALQRDLYGDRVVRPIEHYLDASIVTNGISRAFST 481
Query: 2331 GAWCHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVC 2152
GAWCHP+KRMER+SGVVA VGRANPLQTMIDMR+TRQQVQYTGKVGDARYPHPSHWGKVC
Sbjct: 482 GAWCHPFKRMERMSGVVANVGRANPLQTMIDMRKTRQQVQYTGKVGDARYPHPSHWGKVC 541
Query: 2151 FLSTPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNG 1972
FLSTPDGENCGLVKNLATTGLVSTN+L+ +L E+ CGMEKLVDDT T L GK KVFLNG
Sbjct: 542 FLSTPDGENCGLVKNLATTGLVSTNILESLLPELSLCGMEKLVDDTSTSLQGKLKVFLNG 601
Query: 1971 EWVGVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLR 1792
+WVGVC+DSL+FV LP QVEIKR+ + GEV +YSDAGRILRPLLVVENL
Sbjct: 602 DWVGVCEDSLSFVSELRRMRRRKKLPPQVEIKRDEKQGEVRVYSDAGRILRPLLVVENLN 661
Query: 1791 KIKSLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDM 1612
KIK+ K GKY F+ LDKGI+ELIGAEEEEDC AW + YLFME+ G S +KYTHCELD
Sbjct: 662 KIKAFKGGKYPFQYFLDKGIIELIGAEEEEDCSTAWGISYLFMEEKGKSAVKYTHCELDK 721
Query: 1611 SFLLGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLF 1432
SFLLGLSC I+PFANHDHARRVLYQ+QKH QAIGFSTTNPN+RVDTLSHQLHYPQ+PLF
Sbjct: 722 SFLLGLSCSIIPFANHDHARRVLYQAQKHSAQAIGFSTTNPNLRVDTLSHQLHYPQRPLF 781
Query: 1431 RTMTSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMF 1252
+TMTSDCLGKP LG +PKPE +NGQNAIVAVNVHLG+NQEDSIVMNR+SLERGMF
Sbjct: 782 QTMTSDCLGKPGHQLGQNRVLPKPELHNGQNAIVAVNVHLGFNQEDSIVMNRASLERGMF 841
Query: 1251 RSEHIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDI 1072
RSEHIRSYKAEVDNK+S +KRRK DDC+NFGK+QSK GRVD+LD+DGFP+VGANLQSGDI
Sbjct: 842 RSEHIRSYKAEVDNKDSLEKRRKPDDCVNFGKMQSKFGRVDNLDEDGFPYVGANLQSGDI 901
Query: 1071 VIGRCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG 892
+IGRC++SGADHS+KLKHTERG VQKVVLSSNDDGKNFAVVS+RQVRSPCLGDKFSSMHG
Sbjct: 902 IIGRCSESGADHSIKLKHTERGMVQKVVLSSNDDGKNFAVVSMRQVRSPCLGDKFSSMHG 961
Query: 891 QKGVLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHAT 712
QKGVLGFLE QENFPFTVQGIVPDIVINPHAFPSRQTPGQ + AT
Sbjct: 962 QKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGQKRCAT 1021
Query: 711 PFSTLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKF 532
PFSTLSVDDI QLHRAGFS+ G ERVYSG TG+M+RSLIFMGPTFYQRL+HMSEDKVKF
Sbjct: 1022 PFSTLSVDDIAKQLHRAGFSRCGKERVYSGGTGQMVRSLIFMGPTFYQRLIHMSEDKVKF 1081
Query: 531 RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQK 352
RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSDSSQ+YICQK
Sbjct: 1082 RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQVYICQK 1141
Query: 351 CKNVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQ 172
C++VANVIQR++ GGRKIRGPYCR C S D +VKANVPYGAKLLCQELFSMGISLKFET+
Sbjct: 1142 CEHVANVIQRSVEGGRKIRGPYCRNCNSADYLVKANVPYGAKLLCQELFSMGISLKFETR 1201
>ref|XP_009347298.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Pyrus x bretschneideri]
Length = 1203
Score = 1515 bits (3923), Expect = 0.0
Identities = 745/960 (77%), Positives = 828/960 (86%), Gaps = 8/960 (0%)
Frame = -3
Query: 3027 CKKRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWIL 2860
C K+L I+NNQ L VAY+SE+KR+RLIIRL + G EKVLTVYF+STEIPVW+
Sbjct: 242 CLKKLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWVW 301
Query: 2859 FFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEH----FRGGKNALSFVDKR 2692
FF+LG+S D+EV+DLIDY + DASI NILFASI DA++ E FR GKNAL +VD
Sbjct: 302 FFALGVSSDKEVIDLIDYGSEDASILNILFASIRDADKATEKVDGGFRRGKNALKYVDDV 361
Query: 2691 IKRTTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNK 2512
IK+T FPPGE++E+CI YLFPNL+GLKQKARFLGYMVK LLQA +GRRKC+NRDDF+NK
Sbjct: 362 IKKTAFPPGESMEECISLYLFPNLRGLKQKARFLGYMVKSLLQASAGRRKCDNRDDFRNK 421
Query: 2511 XXXXXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFST 2332
LKAH+ HARRRMAKALQRDLY DR V PIEHYLDASI+TNG+SRAFST
Sbjct: 422 RLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRVVRPIEHYLDASIVTNGISRAFST 481
Query: 2331 GAWCHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVC 2152
GAWCHP+K+MER+SGVVATVGRANPLQTMIDMR+TRQQVQYTGKVGDARYPHPSHWGKVC
Sbjct: 482 GAWCHPFKKMERMSGVVATVGRANPLQTMIDMRKTRQQVQYTGKVGDARYPHPSHWGKVC 541
Query: 2151 FLSTPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNG 1972
FLSTPDGENCGLVKNLATT +VSTN+L+ +L E+ CGMEKLVDDT T L GK KVFLNG
Sbjct: 542 FLSTPDGENCGLVKNLATTTIVSTNILESLLPELSLCGMEKLVDDTSTSLQGKFKVFLNG 601
Query: 1971 EWVGVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLR 1792
+WVGVC+DSL+FV LP QVEIKR+ + GEV +YSDAGRILRPLLVVENL
Sbjct: 602 DWVGVCEDSLSFVSELRRMRRRKKLPPQVEIKRDEKQGEVRVYSDAGRILRPLLVVENLN 661
Query: 1791 KIKSLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDM 1612
KIK+LK K+ F+ L+KGI+ELIGAEEEEDC AW +KYLFME+ G S +KYTHCELDM
Sbjct: 662 KIKALKGEKHPFKYFLNKGIIELIGAEEEEDCSTAWGIKYLFMEEKGKSTVKYTHCELDM 721
Query: 1611 SFLLGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLF 1432
SFLLGLSC I+PFANHDHARRVLYQ+QKH QAIGFSTTNPN+RVDTLSHQLHYPQ+ LF
Sbjct: 722 SFLLGLSCSIIPFANHDHARRVLYQAQKHSSQAIGFSTTNPNLRVDTLSHQLHYPQRSLF 781
Query: 1431 RTMTSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMF 1252
+TMTSDCLGKP LG +PKPE YNGQNAIVAVNVHLG+NQEDSIVMNR+SLERGMF
Sbjct: 782 QTMTSDCLGKPGHQLGKNRVLPKPELYNGQNAIVAVNVHLGFNQEDSIVMNRASLERGMF 841
Query: 1251 RSEHIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDI 1072
RSEHIRSYKAEVDNK S +KRRK DDC+NFGK+QSK GRVD+LD+DGFP+VGANLQSGDI
Sbjct: 842 RSEHIRSYKAEVDNKHSLEKRRKPDDCVNFGKMQSKFGRVDNLDEDGFPYVGANLQSGDI 901
Query: 1071 VIGRCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG 892
+IGRC++SGADHS+KLKHTERG VQKVVLSSNDDGKNFAVVS+RQVRSPCLGDKFSSMHG
Sbjct: 902 IIGRCSESGADHSIKLKHTERGMVQKVVLSSNDDGKNFAVVSMRQVRSPCLGDKFSSMHG 961
Query: 891 QKGVLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHAT 712
QKGVLGFLE QENFPFTVQGIVPDIVINPHAFPSRQTPGQ K+AT
Sbjct: 962 QKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSKKYAT 1021
Query: 711 PFSTLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKF 532
PFSTLSVDDI QLHRAGFS+ G ERVY+G TG+M RSLIFMGPTFYQRL+HMSEDKVKF
Sbjct: 1022 PFSTLSVDDIAEQLHRAGFSRCGKERVYNGGTGKMARSLIFMGPTFYQRLIHMSEDKVKF 1081
Query: 531 RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQK 352
RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSDSSQ+YICQK
Sbjct: 1082 RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQVYICQK 1141
Query: 351 CKNVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQ 172
C++VANVIQR++ GGRKIRGPYCR C S DD+VKANVPYGAKLLCQELFSMGISLKFET+
Sbjct: 1142 CEHVANVIQRSVEGGRKIRGPYCRNCNSADDLVKANVPYGAKLLCQELFSMGISLKFETR 1201
>ref|XP_008357267.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Malus domestica]
Length = 1203
Score = 1513 bits (3917), Expect = 0.0
Identities = 745/960 (77%), Positives = 828/960 (86%), Gaps = 8/960 (0%)
Frame = -3
Query: 3027 CKKRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWIL 2860
C K+L I+NNQ L VAY+SE+KR+RLIIRL + G EKVLTVYF+STEIPVW+
Sbjct: 242 CLKKLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWVW 301
Query: 2859 FFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEH----FRGGKNALSFVDKR 2692
FF+LG+S D+EV+DLIDY + DASI NILFASI DA++ E FR GKNAL +VD
Sbjct: 302 FFALGVSSDKEVIDLIDYGSEDASILNILFASIRDADKATEKVDGGFRRGKNALKYVDDV 361
Query: 2691 IKRTTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNK 2512
IK+T FPPGE++E+CI YLFPNL+GLKQKARFLGYMVK LLQA +GRRKC+NRDDF+NK
Sbjct: 362 IKKTAFPPGESMEECISLYLFPNLRGLKQKARFLGYMVKSLLQASAGRRKCDNRDDFRNK 421
Query: 2511 XXXXXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFST 2332
LKAH+ HARRRMAKALQRDLY DR V PIEHYLDASI+TNG+SRAFST
Sbjct: 422 RLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRVVRPIEHYLDASIVTNGISRAFST 481
Query: 2331 GAWCHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVC 2152
GAWCHP+K+MER+SGVVATVGRANPLQTMIDMR+TRQQVQYTGKVGDARYPHPSHWGKVC
Sbjct: 482 GAWCHPFKKMERMSGVVATVGRANPLQTMIDMRKTRQQVQYTGKVGDARYPHPSHWGKVC 541
Query: 2151 FLSTPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNG 1972
FLSTPDGENCGLVKNLATT +VSTN+L+ +L E+ GMEKLVDDT T L GK KVFLNG
Sbjct: 542 FLSTPDGENCGLVKNLATTTIVSTNILESLLPELSLXGMEKLVDDTSTSLQGKFKVFLNG 601
Query: 1971 EWVGVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLR 1792
+WVGVC+DSL+FV LP QVEIKR+ + GEV +YSDAGRILRPLLVVENL
Sbjct: 602 DWVGVCEDSLSFVSELRRMRRRKKLPPQVEIKRDEKQGEVRVYSDAGRILRPLLVVENLN 661
Query: 1791 KIKSLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDM 1612
KIK+LK K+ F+ LL+KGI+ELIGAEEEEDC AW +KYLFME+ G S +KYTHCELDM
Sbjct: 662 KIKALKGEKHPFKYLLNKGIIELIGAEEEEDCSTAWGIKYLFMEEKGKSAVKYTHCELDM 721
Query: 1611 SFLLGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLF 1432
SFLLGLSC I+PFANHDHARRVLYQ+QKH QAIGFSTTNPN+RVDTLSHQLHYPQ+ LF
Sbjct: 722 SFLLGLSCSIIPFANHDHARRVLYQAQKHSSQAIGFSTTNPNLRVDTLSHQLHYPQRSLF 781
Query: 1431 RTMTSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMF 1252
+TMTSDCLGKP LG +PKPE YNGQNAIVAVNVHLG+NQEDSIVMNR+SLERGMF
Sbjct: 782 QTMTSDCLGKPGHQLGKNRVLPKPELYNGQNAIVAVNVHLGFNQEDSIVMNRASLERGMF 841
Query: 1251 RSEHIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDI 1072
RSEHIRSYKAEVDNK S +KRRK DDC+NFGK+QSK GRVD+LD+DGFP+VGANLQSGDI
Sbjct: 842 RSEHIRSYKAEVDNKHSLEKRRKPDDCVNFGKMQSKFGRVDNLDEDGFPYVGANLQSGDI 901
Query: 1071 VIGRCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG 892
+IGRC++SGADHS+KLKHTERG VQKVVLSSNDDGKNFAVVS+RQVRSPCLGDKFSSMHG
Sbjct: 902 IIGRCSESGADHSIKLKHTERGMVQKVVLSSNDDGKNFAVVSMRQVRSPCLGDKFSSMHG 961
Query: 891 QKGVLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHAT 712
QKGVLGFLE QENFPFTVQGIVPDIVINPHAFPSRQTPGQ K+AT
Sbjct: 962 QKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSKKYAT 1021
Query: 711 PFSTLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKF 532
PFSTLSVDDI QLHRAGFS+ G ERVY+G TG+M RSLIFMGPTFYQRL+HMSEDKVKF
Sbjct: 1022 PFSTLSVDDIAEQLHRAGFSRCGKERVYNGGTGKMARSLIFMGPTFYQRLIHMSEDKVKF 1081
Query: 531 RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQK 352
RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSDSSQ+YICQK
Sbjct: 1082 RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQVYICQK 1141
Query: 351 CKNVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQ 172
C++VANVIQR++ GGRKIRGPYCR C S DD+VKANVPYGAKLLCQELFSMGISLKFET+
Sbjct: 1142 CEHVANVIQRSVEGGRKIRGPYCRNCNSADDLVKANVPYGAKLLCQELFSMGISLKFETR 1201
>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Fragaria vesca subsp. vesca]
Length = 1201
Score = 1511 bits (3912), Expect = 0.0
Identities = 736/958 (76%), Positives = 823/958 (85%), Gaps = 4/958 (0%)
Frame = -3
Query: 3027 CKKRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWIL 2860
C KRL I+N+Q L VAY+SE+KR+RLIIRL+ + G EKVL+VYF+STEIPVWI
Sbjct: 245 CLKRLLITNSQGLTVAYRSEVKRHRLIIRLSGISKLENVEGVEKVLSVYFMSTEIPVWIW 304
Query: 2859 FFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEHFRGGKNALSFVDKRIKRT 2680
FF+LG+S D+EV+DLIDY DASISNILFASI DA+E + FR G NAL +V+ IK T
Sbjct: 305 FFALGVSSDKEVIDLIDYGIEDASISNILFASIRDADERKDDFRRGNNALRYVENAIKST 364
Query: 2679 TFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNKXXXX 2500
TFPPGE++E CI YLFPN++GLKQKARFLGYMVKCLLQ G RKC+NRDDF+NK
Sbjct: 365 TFPPGESVEDCISMYLFPNMRGLKQKARFLGYMVKCLLQTSIGLRKCDNRDDFRNKRLEL 424
Query: 2499 XXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFSTGAWC 2320
LKAH+SHARR+MAKALQRDL D V P+EHYLDASI+TNG+SRAFSTGAWC
Sbjct: 425 AGELLERELKAHVSHARRKMAKALQRDLGGDHVVRPVEHYLDASIVTNGVSRAFSTGAWC 484
Query: 2319 HPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVCFLST 2140
HP+KRMERISGVVA +GRANPLQTMIDMR+TRQQVQYTGK GDARYPHPSHWGKVCFLST
Sbjct: 485 HPFKRMERISGVVANIGRANPLQTMIDMRKTRQQVQYTGKAGDARYPHPSHWGKVCFLST 544
Query: 2139 PDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNGEWVG 1960
PDGENCGLVKNLATT LVS N+ +PIL +++ CG+E+LVDDT+T L GK KVFLNG+WVG
Sbjct: 545 PDGENCGLVKNLATTALVSINISEPILPKLFKCGIEELVDDTYTSLAGKHKVFLNGDWVG 604
Query: 1959 VCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLRKIKS 1780
+C DS FV LPHQVEIKR+ GEV I+SDAGRILRPLLVV+ L+KIK+
Sbjct: 605 ICVDSHGFVTKLRRLRRSKKLPHQVEIKRDEHKGEVRIFSDAGRILRPLLVVQGLKKIKA 664
Query: 1779 LKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDMSFLL 1600
K K+TF+ LDKGI+E IGAEEEEDCR AW +KYLFME+ G S +KYTHCELDMSFLL
Sbjct: 665 AKGEKHTFQDFLDKGIIEFIGAEEEEDCRTAWAIKYLFMEEQG-SVVKYTHCELDMSFLL 723
Query: 1599 GLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTMT 1420
GLSCGI+PFANHDHARRVLYQSQKH QQAIG+STTNPN+RVDTLSH LHYPQ+PLFRTM
Sbjct: 724 GLSCGIIPFANHDHARRVLYQSQKHSQQAIGYSTTNPNLRVDTLSHNLHYPQRPLFRTMI 783
Query: 1419 SDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMFRSEH 1240
+D LGKP P+GH GFMPKPE++NGQNAIVAVNVHLGYNQEDSIVMNR+SLERGMFRSEH
Sbjct: 784 ADSLGKPGYPVGHNGFMPKPEYFNGQNAIVAVNVHLGYNQEDSIVMNRASLERGMFRSEH 843
Query: 1239 IRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDIVIGR 1060
IRSYKAEV+NK S +KRRK D+C+NFGK+QSK GRVD+LDDDGFP VGA+LQSGDI+IGR
Sbjct: 844 IRSYKAEVENKLSLEKRRKPDECVNFGKIQSKFGRVDNLDDDGFPCVGASLQSGDIIIGR 903
Query: 1059 CADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGV 880
C++SG DHS+KLKHTERG VQKVVLSSND GKNFAVVSLRQVRSP LGDKFSSMHGQKGV
Sbjct: 904 CSESGTDHSIKLKHTERGMVQKVVLSSNDAGKNFAVVSLRQVRSPSLGDKFSSMHGQKGV 963
Query: 879 LGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHATPFST 700
LGFLEYQENFPFT+QGIVPDIVINPHAFPSRQTPGQ ++ATPFST
Sbjct: 964 LGFLEYQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYATPFST 1023
Query: 699 LSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKFRNTG 520
LSVDDIT QLHRAGFS+WGNERVY+G TGEM+R LIFMGPTFYQRL+HMSEDKVKFRNTG
Sbjct: 1024 LSVDDITDQLHRAGFSRWGNERVYNGRTGEMVRQLIFMGPTFYQRLIHMSEDKVKFRNTG 1083
Query: 519 PVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQKCKNV 340
PVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSDSS M +CQKC+N
Sbjct: 1084 PVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSLMNVCQKCQNA 1143
Query: 339 ANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQLC 166
ANVI+R L GGRKIRGPYCR C+S DDIV+ NVPYGAKLLCQELFSMGISLKFET+LC
Sbjct: 1144 ANVIERKLTGGRKIRGPYCRVCDSADDIVRVNVPYGAKLLCQELFSMGISLKFETRLC 1201
>ref|XP_011036682.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Populus euphratica]
Length = 1190
Score = 1503 bits (3890), Expect = 0.0
Identities = 729/958 (76%), Positives = 816/958 (85%), Gaps = 4/958 (0%)
Frame = -3
Query: 3030 ICKKRLWISNNQPLQVAYQSELKRNRLIIRLAS----DASRGGEKVLTVYFLSTEIPVWI 2863
IC KRLWISN+Q V+Y+SE+KRNRLI+RL + +G +K L VYFLSTEIP+WI
Sbjct: 232 ICMKRLWISNSQGWTVSYKSEVKRNRLIVRLVELSKLEYIKGEKKGLCVYFLSTEIPLWI 291
Query: 2862 LFFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEHFRGGKNALSFVDKRIKR 2683
LFF+LG+ D+EV+DLIDY + DASI NI FASIHDA+E CEHFR AL +VDK +K+
Sbjct: 292 LFFALGVRSDKEVIDLIDYASNDASIVNIFFASIHDADEKCEHFRREDRALDYVDKLLKK 351
Query: 2682 TTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNKXXX 2503
T FPP E+IE I YLFP L KARFLGYMVKCLL+A++G RKC+NRD F+NK
Sbjct: 352 TRFPPKESIEDAISAYLFPRLNSRGHKARFLGYMVKCLLEAYTGHRKCDNRDSFRNKRFE 411
Query: 2502 XXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFSTGAW 2323
LK H+SHA RRM KALQRDLY DR VHPIEHYLDASI+TNGL+RAFSTGAW
Sbjct: 412 LASELLERELKVHVSHALRRMTKALQRDLYGDRDVHPIEHYLDASIVTNGLTRAFSTGAW 471
Query: 2322 CHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS 2143
CHP+K MER+SGVV +GRANPLQTMID+R+TRQQV YTGKVGDARYPHPSHWG+VCFLS
Sbjct: 472 CHPFKWMERVSGVVGNLGRANPLQTMIDLRKTRQQVLYTGKVGDARYPHPSHWGRVCFLS 531
Query: 2142 TPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNGEWV 1963
TPDGENCGLVKNLA TG+VSTN+ + ++ +++ GMEKLVDDT+TKL GK KVFLNGEWV
Sbjct: 532 TPDGENCGLVKNLAVTGVVSTNISESLVDKLFGSGMEKLVDDTYTKLDGKHKVFLNGEWV 591
Query: 1962 GVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLRKIK 1783
GVC+DS FV LP+QVEIKR+ Q EV I+SDAGRILRPLLVVENL KIK
Sbjct: 592 GVCEDSCLFVGELRSMRRRRELPYQVEIKRDEQQREVRIFSDAGRILRPLLVVENLDKIK 651
Query: 1782 SLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDMSFL 1603
+ K G Y F LLDKGI+E IG EEEEDC AW +K+L + G +KYTHCELDMSFL
Sbjct: 652 AFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKFLLADIEGKQPMKYTHCELDMSFL 711
Query: 1602 LGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTM 1423
LGLSCGI+PFANHDHARRVLYQ+QKH QQAIGFSTTNPNIRVDTLSHQLHYPQ+PLFRTM
Sbjct: 712 LGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLHYPQRPLFRTM 771
Query: 1422 TSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMFRSE 1243
SDCLGKP PLGH +PKPE +NGQNAIVAVNVHLGYNQEDS+VMNR+SLERGMFRSE
Sbjct: 772 ISDCLGKPGYPLGHNAVLPKPELFNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSE 831
Query: 1242 HIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDIVIG 1063
HIRSYKAEVDNKE +DKRRK++D I FGK+QSKIGRVDSLDDDGFPF+GAN+QSGDIVIG
Sbjct: 832 HIRSYKAEVDNKELTDKRRKSEDSITFGKIQSKIGRVDSLDDDGFPFIGANMQSGDIVIG 891
Query: 1062 RCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKG 883
+CA+SGADHSVKLKHTERG VQKVVLSSND+GKNFAVVSLRQVRSPCLGDKFSSMHGQKG
Sbjct: 892 KCAESGADHSVKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKG 951
Query: 882 VLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHATPFS 703
VLGFLE QENFPFT+QG+VPDIVINPHAFPSRQTPGQ ++ATPFS
Sbjct: 952 VLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYATPFS 1011
Query: 702 TLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKFRNT 523
TLSVDDI QLHRA FS+WGNERVY+G TGEM+RSLIFMGPTFYQRLVHM+EDKVKFRNT
Sbjct: 1012 TLSVDDIIDQLHRAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNT 1071
Query: 522 GPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQKCKN 343
GPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSDSS+M+ICQKCKN
Sbjct: 1072 GPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSEMHICQKCKN 1131
Query: 342 VANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQL 169
VANVIQRA+PGGRKIRGPYCR CESVDD++K +VPYGAKLLCQELFSMGISLKF+T++
Sbjct: 1132 VANVIQRAVPGGRKIRGPYCRVCESVDDLIKVSVPYGAKLLCQELFSMGISLKFDTRV 1189
>ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Jatropha curcas] gi|802626342|ref|XP_012076430.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
2-like [Jatropha curcas] gi|643724314|gb|KDP33515.1|
hypothetical protein JCGZ_07086 [Jatropha curcas]
Length = 1209
Score = 1485 bits (3845), Expect = 0.0
Identities = 726/959 (75%), Positives = 809/959 (84%), Gaps = 4/959 (0%)
Frame = -3
Query: 3030 ICKKRLWISNNQPLQVAYQSELKRNRLIIRLAS----DASRGGEKVLTVYFLSTEIPVWI 2863
+C KRLWISN Q V+Y+SE+KRNRLI+RL + +G +K L VYFLSTEIP+WI
Sbjct: 252 VCLKRLWISNIQSWTVSYKSEIKRNRLIVRLVDLSKVEDIKGEKKGLNVYFLSTEIPLWI 311
Query: 2862 LFFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEHFRGGKNALSFVDKRIKR 2683
LFF+LGI+ D+EV+DLIDY DASI NI FASIHDA+E CE FR + AL +V K+I+
Sbjct: 312 LFFALGITSDKEVIDLIDYNTEDASIVNIFFASIHDADEKCEGFRNDREALGYVIKQIQG 371
Query: 2682 TTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNKXXX 2503
T FPPGE E CI YLFP+L +QKARFLGYMVKCLLQA+SG+RKC+NRD F+NK
Sbjct: 372 TRFPPGET-EDCISLYLFPSLHSPRQKARFLGYMVKCLLQAYSGQRKCDNRDSFRNKRFE 430
Query: 2502 XXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFSTGAW 2323
LK H++HARRRMAKALQ+DLY DR V PIEHYLDASI+TNGLSRAFSTGAW
Sbjct: 431 LAGELLDRELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDASIVTNGLSRAFSTGAW 490
Query: 2322 CHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS 2143
HP+KRMERISGVVA +GR NPLQTM+D+R+TRQQVQYTGKVGDARYPHPSHWG+VCFLS
Sbjct: 491 SHPFKRMERISGVVANLGRTNPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGRVCFLS 550
Query: 2142 TPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNGEWV 1963
TPDGENCGLVKNLA TGLVST +L+P++ ++ CGM+KLVDDT TKL K KVFLNGEWV
Sbjct: 551 TPDGENCGLVKNLAITGLVSTEILEPLIDILFDCGMDKLVDDTHTKLDEKYKVFLNGEWV 610
Query: 1962 GVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLRKIK 1783
GVC+DS FV LP QVEIKR+ Q EV I++DAGRILRPLLVVENL KIK
Sbjct: 611 GVCEDSNLFVAELRRLRRRKKLPRQVEIKRDEQQKEVRIFADAGRILRPLLVVENLHKIK 670
Query: 1782 SLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDMSFL 1603
+ K G YTF+ LLDKGI+E IG EEEEDC AW +K+L +KYTHCELDMSFL
Sbjct: 671 AFKGGNYTFQSLLDKGIIEFIGTEEEEDCSTAWGIKFLVAGVDKKQPLKYTHCELDMSFL 730
Query: 1602 LGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTM 1423
LGLSCGI+PFANHDHARRVLYQ+QKH QQAIGF TTNPNIRVDTLSHQLHYPQ+PLFRT+
Sbjct: 731 LGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLHYPQRPLFRTV 790
Query: 1422 TSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMFRSE 1243
T+DCLGKP GH G +PKPE +NGQNAIVAVNVHLGYNQEDS+VMNR+SLERGMFRSE
Sbjct: 791 TADCLGKPGYARGHHGMLPKPELFNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSE 850
Query: 1242 HIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDIVIG 1063
HIRSYKA+VDNKE DKRRK +D +NFGK+QSKIGRVDSLDDDGFPF+GANLQSGDIVIG
Sbjct: 851 HIRSYKADVDNKELLDKRRKFEDTVNFGKIQSKIGRVDSLDDDGFPFIGANLQSGDIVIG 910
Query: 1062 RCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKG 883
R A+SGADHS+KLKHTERG VQKVVLSSND+GKNFAVVSLRQVRSPCLGDKFSSMHGQKG
Sbjct: 911 RFAESGADHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKG 970
Query: 882 VLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHATPFS 703
VLGFLE QENFPFT G+VPDIVINPHAFPSRQTPGQ M++ATPFS
Sbjct: 971 VLGFLESQENFPFTKDGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGPMRYATPFS 1030
Query: 702 TLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKFRNT 523
TLSV+ IT QLHRAGFS+WGNE+V +G TGEM+RSLIFMGPTFYQRL+HM+EDKVKFRNT
Sbjct: 1031 TLSVEAITDQLHRAGFSRWGNEKVCNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNT 1090
Query: 522 GPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQKCKN 343
GPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSDSSQM+ICQ CKN
Sbjct: 1091 GPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQNCKN 1150
Query: 342 VANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQLC 166
VANVI+R +P RKIR PYCR CES DDIVK NVPYGAKLLCQELFSMGISLKFETQLC
Sbjct: 1151 VANVIERTVPPSRKIRAPYCRICESADDIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1209
>ref|XP_010101029.1| DNA-directed RNA polymerase D subunit 2a [Morus notabilis]
gi|587898230|gb|EXB86677.1| DNA-directed RNA polymerase D
subunit 2a [Morus notabilis]
Length = 1196
Score = 1483 bits (3840), Expect = 0.0
Identities = 726/960 (75%), Positives = 814/960 (84%), Gaps = 5/960 (0%)
Frame = -3
Query: 3030 ICKKRLWISNNQPLQVAYQSELKRNRLIIRLASDASRGG---EKVLTVYFLSTEIPVWIL 2860
IC+KRLWI+++Q L VAYQSE+KRNRLI+RLA + VL VYFLSTEIPVWIL
Sbjct: 238 ICRKRLWITSHQNLTVAYQSEVKRNRLILRLAQSGLEDTTVEKDVLCVYFLSTEIPVWIL 297
Query: 2859 FFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEHFRGGKNALSFVDKRIKRT 2680
FF+LG+S D+EV+DLID+ DASI NILF SI ++E C FR K AL FV+K IK+T
Sbjct: 298 FFALGVSSDKEVVDLIDFPTDDASILNILFPSIQISDEVCAGFRRQKKALGFVEKHIKKT 357
Query: 2679 TFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNKXXXX 2500
FPP E+ E+C++ +LFPNL+G+ QKARFLGYMVKCLLQAF+GRRKCNN+DDF+NK
Sbjct: 358 QFPPRESAEECLDMFLFPNLRGMLQKARFLGYMVKCLLQAFTGRRKCNNKDDFRNKRLDL 417
Query: 2499 XXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFSTGAWC 2320
L+A +SHAR+R AKALQRDLY D+ + IE YLDASI+TNGLSRAFSTGAWC
Sbjct: 418 AGELLERELRAQVSHARKRTAKALQRDLYGDKGLRQIEFYLDASIVTNGLSRAFSTGAWC 477
Query: 2319 HPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVCFLST 2140
HP+K+ ERISGVVA VGR NPLQT++DMR+TRQQVQYTGKVGDARYPHPSHWGKVCFLST
Sbjct: 478 HPFKKTERISGVVANVGRTNPLQTVVDMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLST 537
Query: 2139 PDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNGEWVG 1960
PDGENCGLVKNLA TGLVS N+ + ++S + GME L +DT+T L K KVFLNG+W+G
Sbjct: 538 PDGENCGLVKNLAATGLVSINIAESLISTLCDSGMENLANDTYTPLHEKHKVFLNGDWIG 597
Query: 1959 VCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLRKIKS 1780
VC DSL FV LPHQVEIKR+ QHGEV I+SD+GRILRPLLVVENL +IK
Sbjct: 598 VCADSLAFVTELRRKRRRNELPHQVEIKRDEQHGEVRIFSDSGRILRPLLVVENLNRIKP 657
Query: 1779 LKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDMSFLL 1600
KEGKYTF LLDKGI+ELIGAEEEEDCR AW +KYLFMEDGG + YTHCELDMSFLL
Sbjct: 658 SKEGKYTFHSLLDKGIIELIGAEEEEDCRTAWGIKYLFMEDGG-KPVNYTHCELDMSFLL 716
Query: 1599 GLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTMT 1420
+SCGI+PFANHDHARRVLYQ+QKH QQAIGF TTNP+IRVDTLSHQLHYPQ+PLF+TMT
Sbjct: 717 SVSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPDIRVDTLSHQLHYPQRPLFQTMT 776
Query: 1419 SDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMFRSEH 1240
SDCLGK GF+PK E +NGQNAIVAVNVHLGYNQEDSIVMNR+SLERGMFRSEH
Sbjct: 777 SDCLGKRGYAPSQNGFIPKFECFNGQNAIVAVNVHLGYNQEDSIVMNRASLERGMFRSEH 836
Query: 1239 IRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDIVIGR 1060
IRSYKA+VDNKES+DKRRK DDC NF K+ SK GRVDSLDDDGFPF+GANLQSGDIVIGR
Sbjct: 837 IRSYKADVDNKESTDKRRKPDDCFNFAKIPSKNGRVDSLDDDGFPFIGANLQSGDIVIGR 896
Query: 1059 CADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGV 880
CA+SGADHS+KLKHTE+G VQKVVLSSNDDGKNFAVVSLRQVR P LGDKFSSMHGQKGV
Sbjct: 897 CAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVSLRQVRQPILGDKFSSMHGQKGV 956
Query: 879 LGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQ--XXXXXXXXXXXXXXLMKHATPF 706
LG+LE QENFPFT+QGIVPDIVINPHAFPSRQTPGQ ++HATPF
Sbjct: 957 LGYLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALAKGIPLRHATPF 1016
Query: 705 STLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKFRN 526
ST SVD IT QLH+AGFS+WGNERVY+G TGEM+RSLIFMGPTFYQRLVHMSEDKVKFRN
Sbjct: 1017 STPSVDAITEQLHKAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMSEDKVKFRN 1076
Query: 525 TGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQKCK 346
TGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQM+IC +C
Sbjct: 1077 TGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMHICHRCH 1136
Query: 345 NVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQLC 166
NVAN+IQR+L GGRK+RGPYCR C+S DDIV+ NVPYGAKLLCQELF+MGI+LKFET++C
Sbjct: 1137 NVANIIQRSLMGGRKVRGPYCRICKSADDIVRVNVPYGAKLLCQELFTMGINLKFETRIC 1196
>ref|XP_008452849.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Cucumis melo]
Length = 1197
Score = 1483 bits (3840), Expect = 0.0
Identities = 725/961 (75%), Positives = 816/961 (84%), Gaps = 6/961 (0%)
Frame = -3
Query: 3030 ICKKRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWI 2863
IC +RLWISN Q VAY+SE+KRNRLIIRL ++ + EKVL VYFLSTE+PVWI
Sbjct: 240 ICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKSEDLKSKEKVLNVYFLSTEVPVWI 299
Query: 2862 LFFSLGISCDREVMDLIDYENPDASISNILFASIH--DANENCEHFRGGKNALSFVDKRI 2689
LFF+LG+S D+E++DLIDY D ++ NILFAS+ D ++ + FR GK AL+F+D I
Sbjct: 300 LFFALGVSSDKEIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKRALTFLDNEI 359
Query: 2688 KRTTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNKX 2509
++T+FPP E IE C+ YLF +LKGLKQK FLGYMVKCLLQA++GRRKC+NRDDF+NK
Sbjct: 360 RKTSFPPAEKIEDCLNLYLFASLKGLKQKCHFLGYMVKCLLQAYTGRRKCDNRDDFRNKR 419
Query: 2508 XXXXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFSTG 2329
LK H++HARRRM KALQRDLY DR V PIEHYLDASIITNGLSRAFSTG
Sbjct: 420 FELAAELLERELKVHIAHARRRMEKALQRDLYGDRQVRPIEHYLDASIITNGLSRAFSTG 479
Query: 2328 AWCHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVCF 2149
AW H +KRMERISGVVAT+GRANPLQTM ++RRTRQQV YTGKVGDARYPHPSHWG+VCF
Sbjct: 480 AWAHAFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCF 539
Query: 2148 LSTPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNGE 1969
LSTPDGENCGL+KNL+ TGLVS N KPI+ ++ CGME L D+T T L GK ++FL+GE
Sbjct: 540 LSTPDGENCGLIKNLSGTGLVSLNTTKPIIPTLFCCGMENLADNTSTSLCGKYRIFLDGE 599
Query: 1968 WVGVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLRK 1789
WVGVC+DSL+FV HQVE+KR+ Q EV I+SDAGRILRPLLVVENL +
Sbjct: 600 WVGVCEDSLSFVTKVRRKRRRNPFLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNR 659
Query: 1788 IKSLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDMS 1609
I K YTF+ LLDKGI+EL+G EEEEDCRVAW +K+L MED GT+ KY+HCELDMS
Sbjct: 660 IDKSKGENYTFQSLLDKGIIELVGTEEEEDCRVAWSIKHL-MEDEGTT--KYSHCELDMS 716
Query: 1608 FLLGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLFR 1429
FLLGLSCG+VPFANHDHARR L+QSQKH QAIGFSTTN N RVDTLSHQLHYPQ+PLFR
Sbjct: 717 FLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFR 776
Query: 1428 TMTSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMFR 1249
TMT+DCLG P H G +PKPEFYNGQNAIVAVNVHLGYNQEDS+VMNR+SLERGMFR
Sbjct: 777 TMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFR 836
Query: 1248 SEHIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDIV 1069
SEH RSYKAEVDNKESS+KRRK+DD INFGK QSKIGRVDSLDDDGFP++GANLQSGDIV
Sbjct: 837 SEHTRSYKAEVDNKESSEKRRKSDDTINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIV 896
Query: 1068 IGRCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQ 889
IGRCA+SGADHS+KLKHTE+G VQKVVLSSNDDGKN+AVVSLRQVRSPCLGDKFSSMHGQ
Sbjct: 897 IGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQ 956
Query: 888 KGVLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHATP 709
KGVLGFLE QENFPFT+QGIVPDIVINPHAFPSRQTPGQ +K+ATP
Sbjct: 957 KGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATP 1016
Query: 708 FSTLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKFR 529
FST SVD IT QLHRAGFS+WG+ERVY+G TGEM+RSLIFMGPTFYQRL+HM+EDKVKFR
Sbjct: 1017 FSTPSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFR 1076
Query: 528 NTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQKC 349
NTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSDSSQM++CQKC
Sbjct: 1077 NTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKC 1136
Query: 348 KNVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQL 169
KNVA+VIQR++ GGRKIRGPYCR CESVDDIV+ NVPYGAKLLCQELFSMGI+LKFETQL
Sbjct: 1137 KNVASVIQRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQL 1196
Query: 168 C 166
C
Sbjct: 1197 C 1197
>gb|KHG03399.1| DNA-directed RNA polymerase D subunit 2a -like protein [Gossypium
arboreum]
Length = 1204
Score = 1483 bits (3839), Expect = 0.0
Identities = 725/964 (75%), Positives = 814/964 (84%), Gaps = 9/964 (0%)
Frame = -3
Query: 3030 ICKKRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWI 2863
I KRLWISN Q VAY+SE+KRNRLIIRL ++ +GGEK+LTV+FLS EIPVWI
Sbjct: 241 ISLKRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKVEYIKGGEKILTVFFLSIEIPVWI 300
Query: 2862 LFFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEHFRGGKNALSFVDKRIKR 2683
LFF+LG+ D+EV+ LIDY + D+SISNILFASI DA+ C +FR AL+ +D+ K
Sbjct: 301 LFFALGVRSDKEVVSLIDYGSSDSSISNILFASIRDADWKCRNFREESAALNHLDRLRKE 360
Query: 2682 TTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNKXXX 2503
T FPP E++E+C+ YLFP+LKG KQKARFLGYMVKCLLQAF+G RKC+NRDDF+NK
Sbjct: 361 TRFPPEESVEECLGKYLFPSLKGFKQKARFLGYMVKCLLQAFTGHRKCDNRDDFRNKRLE 420
Query: 2502 XXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFSTGAW 2323
+K H++HARRRMAK LQRDLYADRTV PIEHYLDASI+TNGLSRAFSTGAW
Sbjct: 421 LAGELLEREMKVHIAHARRRMAKTLQRDLYADRTVRPIEHYLDASIVTNGLSRAFSTGAW 480
Query: 2322 CHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS 2143
HPYK+MERISGVVA +GRANPLQTM+D+R+TRQQVQYTGKVGDARYPHPSHWGKVCFLS
Sbjct: 481 SHPYKKMERISGVVANLGRANPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGKVCFLS 540
Query: 2142 TPDGENCGLVKNLATTGLVSTNVLKPILSE----MYHCGMEKLVDDTFTKLTGKDKVFLN 1975
TPDGENCGLVKNLATT LVSTN++K ++ ++ GMEK+V+DT + L GKDKVFLN
Sbjct: 541 TPDGENCGLVKNLATTALVSTNIVKSVVESIVDTLFDSGMEKVVNDTSSSLDGKDKVFLN 600
Query: 1974 GEWVGVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENL 1795
GEWVGVC+DSL F LP+QVEIKR+ GEV I++DAGRILRPLLVVENL
Sbjct: 601 GEWVGVCEDSLFFAAELRRKRRRRELPYQVEIKRDEHKGEVRIFTDAGRILRPLLVVENL 660
Query: 1794 RKIKSLK-EGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCEL 1618
K+K+ K + Y F+ LLDKGIVELIGAEEEEDCR AW ++YL E G +KYTHCEL
Sbjct: 661 FKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDCRTAWGIRYLLTEVEGKQPVKYTHCEL 720
Query: 1617 DMSFLLGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKP 1438
DMSFLLGLSCGI+PFANHDHARRVLYQ+QKH QQAIGFSTTNPNIRVDTLSHQ++YPQ+P
Sbjct: 721 DMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQMYYPQRP 780
Query: 1437 LFRTMTSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERG 1258
LF TMTSDCLGK PLG PKPE YNGQNAIVAVNVHLGYNQEDS+VMNR+S+ERG
Sbjct: 781 LFHTMTSDCLGKSGFPLGQNRLEPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASIERG 840
Query: 1257 MFRSEHIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSG 1078
MFR+EH+RSYKAEVDNKE +KRRKA+D +NFGK +SKIGRVDSLDDDGFP++GA+LQSG
Sbjct: 841 MFRTEHVRSYKAEVDNKEIQEKRRKAEDIVNFGKTESKIGRVDSLDDDGFPYIGASLQSG 900
Query: 1077 DIVIGRCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSM 898
DIVIGR A+SGADH VKLKHTERG VQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSM
Sbjct: 901 DIVIGRFAESGADHGVKLKHTERGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSM 960
Query: 897 HGQKGVLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKH 718
HGQKGVLGFLE ENFPFT QGIVPDIVINPHAFPSRQTPGQ KH
Sbjct: 961 HGQKGVLGFLESHENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKKH 1020
Query: 717 ATPFSTLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKV 538
ATPFSTLS+D IT QLHR GFS+WGNERVY+G TGEM+RSLIFMGPTFYQRLVHM+EDKV
Sbjct: 1021 ATPFSTLSIDAITEQLHRVGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKV 1080
Query: 537 KFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYIC 358
KFRNTGPVHPLTRQPVADRKR+GG+KFGEMERDCL+AHGASANLHERLFTLSD SQM++C
Sbjct: 1081 KFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERLFTLSDCSQMHVC 1140
Query: 357 QKCKNVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFE 178
Q CKN ANVI+R + GRKIRGPYCR C+S D+IVK +VPYGAKLLCQELFSMGISLKFE
Sbjct: 1141 QNCKNAANVIERTVAAGRKIRGPYCRVCQSGDEIVKVSVPYGAKLLCQELFSMGISLKFE 1200
Query: 177 TQLC 166
TQLC
Sbjct: 1201 TQLC 1204
>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
subunit, putative [Ricinus communis]
Length = 1203
Score = 1482 bits (3837), Expect = 0.0
Identities = 727/959 (75%), Positives = 812/959 (84%), Gaps = 4/959 (0%)
Frame = -3
Query: 3030 ICKKRLWISNNQPLQVAYQSELKRNRLIIRL----ASDASRGGEKVLTVYFLSTEIPVWI 2863
IC KRLWISN Q V+Y+SE+KRNRLI+RL A + + +K LTVYFLSTEIP+WI
Sbjct: 246 ICLKRLWISNIQGWTVSYKSEIKRNRLIVRLVGLSALEDVKAEKKCLTVYFLSTEIPLWI 305
Query: 2862 LFFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEHFRGGKNALSFVDKRIKR 2683
LFF+LG++ D+EV+DLI Y + DA I NI FASIHDA+E E FR GK AL +V ++I+
Sbjct: 306 LFFALGVTSDKEVIDLIGYGSNDARIVNIFFASIHDADEKTEGFRRGKEALEYVVRQIRG 365
Query: 2682 TTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNKXXX 2503
T FPPGEN E YLFP L L+QKARFLGYMVKCLLQA++G+RKCNN D F+NK
Sbjct: 366 TRFPPGEN-EDFFLLYLFPTLHSLRQKARFLGYMVKCLLQAYNGQRKCNNWDSFRNKRFE 424
Query: 2502 XXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFSTGAW 2323
LK H++HARRRMAKALQ+DLY DR V PIEHYLDASI+TNGLSRAFSTGAW
Sbjct: 425 LAKELLERELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDASIVTNGLSRAFSTGAW 484
Query: 2322 CHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS 2143
HPYKRMERISGVVA +GRANPLQTM+D+R+TR VQYTGKVGDAR+PHPSHWG+VCFLS
Sbjct: 485 SHPYKRMERISGVVANLGRANPLQTMVDLRKTRYHVQYTGKVGDARFPHPSHWGRVCFLS 544
Query: 2142 TPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNGEWV 1963
TPDGENCGLVKNLATTGLVS N+L+P++ ++ GMEK+ +D+ + L KDKVFLNGEWV
Sbjct: 545 TPDGENCGLVKNLATTGLVSVNILEPLIDKLIARGMEKVPEDSHSDLDEKDKVFLNGEWV 604
Query: 1962 GVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLRKIK 1783
GVC+DS FV LP QVEIKR+ Q EV I+SDAGRILRPLLVV+NL KI+
Sbjct: 605 GVCEDSRLFVAELRRLRRRKKLPQQVEIKRDEQQQEVRIFSDAGRILRPLLVVQNLHKIE 664
Query: 1782 SLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDMSFL 1603
+ K G TF+ LLDKGI+E +G EEEEDC AW +K+L G +KYTHCELDMSFL
Sbjct: 665 AFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVDGKQSLKYTHCELDMSFL 724
Query: 1602 LGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTM 1423
LGLSCGI+PFANHDHARRVLYQ+QKH QQAIGF TTNPNIRVDTLSHQL+YPQ+PLFRT+
Sbjct: 725 LGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLYYPQRPLFRTV 784
Query: 1422 TSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMFRSE 1243
TSDCLGKP GH G +PKPE YNGQNAIVAVNVHLGYNQEDS+VMNR+SLERGMFRSE
Sbjct: 785 TSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSE 844
Query: 1242 HIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDIVIG 1063
HIRSYKA+VDNKE DKRRK DD +NFGK+ SKIGRVDSLDDDGFPF+GANLQSGDIVIG
Sbjct: 845 HIRSYKADVDNKELLDKRRKYDDNVNFGKIPSKIGRVDSLDDDGFPFIGANLQSGDIVIG 904
Query: 1062 RCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKG 883
RCA+SG DHS+KLKHTERG VQKVVLSSND+GKNFAVVSLRQVRSPCLGDKFSSMHGQKG
Sbjct: 905 RCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKG 964
Query: 882 VLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHATPFS 703
VLGFLE QENFPFT QGIVPDIVINPH+FPSRQTPGQ MK+ATPFS
Sbjct: 965 VLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQLLEAALGKGIACGGSMKYATPFS 1024
Query: 702 TLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKFRNT 523
TLSV+ IT QLHRAGFS+WGNERVY+G TGEM+RSLIFMGPTFYQRL+HM+EDKVKFRNT
Sbjct: 1025 TLSVEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNT 1084
Query: 522 GPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQKCKN 343
GPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSDSSQM+ICQKCKN
Sbjct: 1085 GPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQKCKN 1144
Query: 342 VANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQLC 166
VANVIQRA+PGGRKIRGPYCR CESVD+IVK NVPYGAKLLCQELFSMGISLKFET+LC
Sbjct: 1145 VANVIQRAVPGGRKIRGPYCRVCESVDEIVKVNVPYGAKLLCQELFSMGISLKFETRLC 1203
>ref|XP_012452401.1| PREDICTED: DNA-directed RNA polymerase D subunit 2b-like [Gossypium
raimondii] gi|763740193|gb|KJB07692.1| hypothetical
protein B456_001G037900 [Gossypium raimondii]
Length = 1204
Score = 1479 bits (3830), Expect = 0.0
Identities = 724/964 (75%), Positives = 814/964 (84%), Gaps = 9/964 (0%)
Frame = -3
Query: 3030 ICKKRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWI 2863
I KRLWISN Q VAY+SE+KRNRLIIRL ++ +GGEK+LTV+FLS EIPVWI
Sbjct: 241 ISLKRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKVEYIKGGEKILTVFFLSIEIPVWI 300
Query: 2862 LFFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEHFRGGKNALSFVDKRIKR 2683
LFF+LG+ D+EV+ LIDY + D+SISNILFASI DA+ C +FR AL+ +D+ K
Sbjct: 301 LFFALGVRSDKEVVSLIDYGSSDSSISNILFASIRDADWKCRNFREESAALNHLDRLRKE 360
Query: 2682 TTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNKXXX 2503
T FPP E++E+C+ YLFP+LKG KQKARFLGYMVK LLQAF+G RKC+NRDDF+NK
Sbjct: 361 TRFPPEESVEECLGKYLFPSLKGFKQKARFLGYMVKSLLQAFTGHRKCDNRDDFRNKRLE 420
Query: 2502 XXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFSTGAW 2323
+K H++HARRRMAK LQRDLYADRTV PIEHYLDASI+TNGLSRAFSTGAW
Sbjct: 421 LAGELLEREMKVHIAHARRRMAKTLQRDLYADRTVRPIEHYLDASIVTNGLSRAFSTGAW 480
Query: 2322 CHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS 2143
HPYK+MERISGVVA +GRANPLQTM+D+R+TRQQVQYTGKVGDARYPHPSHWGKVCFLS
Sbjct: 481 SHPYKKMERISGVVANLGRANPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGKVCFLS 540
Query: 2142 TPDGENCGLVKNLATTGLVSTNVLKPILSE----MYHCGMEKLVDDTFTKLTGKDKVFLN 1975
TPDGENCGLVKNLATT LVSTN++K ++ ++ GMEK+V+DT + L GKDKVFLN
Sbjct: 541 TPDGENCGLVKNLATTALVSTNIVKSVVESIVDTLFDSGMEKVVNDTSSSLDGKDKVFLN 600
Query: 1974 GEWVGVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENL 1795
GEWVGVC+DSL F LP+QVEIKR+ GEV I++DAGRILRPLLVVENL
Sbjct: 601 GEWVGVCEDSLFFAAELRRKRRRKELPYQVEIKRDEHKGEVRIFTDAGRILRPLLVVENL 660
Query: 1794 RKIKSLK-EGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCEL 1618
K+K+ K + Y F+ LLDKGIVELIGAEEEEDCR AW ++YL E G +KYTHCEL
Sbjct: 661 FKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDCRTAWGIRYLLTEVEGKQPVKYTHCEL 720
Query: 1617 DMSFLLGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKP 1438
DMSFLLGLSCGI+PFANHDHARRVLYQ+QKH QQAIGFSTTNPNIRVDTLSHQ++YPQ+P
Sbjct: 721 DMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQMYYPQRP 780
Query: 1437 LFRTMTSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERG 1258
LF TMT+DCLGK PLG PKPE YNGQNAIVAVNVHLGYNQEDS+VMNR+S+ERG
Sbjct: 781 LFHTMTADCLGKSGFPLGQNRLEPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASIERG 840
Query: 1257 MFRSEHIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSG 1078
MFR+EH+RSYKAEVDNKE +KRRKA+D +NFGK +SKIGRVDSLDDDGFP++GA+LQSG
Sbjct: 841 MFRTEHVRSYKAEVDNKEIQEKRRKAEDIVNFGKTESKIGRVDSLDDDGFPYIGASLQSG 900
Query: 1077 DIVIGRCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSM 898
DIVIGR A+SGADH VKLKHTERG VQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSM
Sbjct: 901 DIVIGRFAESGADHGVKLKHTERGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSM 960
Query: 897 HGQKGVLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKH 718
HGQKGVLGFLE ENFPFT QGIVPDIVINPHAFPSRQTPGQ KH
Sbjct: 961 HGQKGVLGFLESHENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKKH 1020
Query: 717 ATPFSTLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKV 538
ATPFSTLS+D IT QLHRAGFS+WGNERVY+G TGEM+RSLIFMGPTFYQRLVHM+EDKV
Sbjct: 1021 ATPFSTLSIDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKV 1080
Query: 537 KFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYIC 358
KFRNTGPVHPLTRQPVADRKR+GG+KFGEMERDCL+AHGASANLHERLFTLSD SQM++C
Sbjct: 1081 KFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERLFTLSDCSQMHVC 1140
Query: 357 QKCKNVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFE 178
Q CKN ANVI+R + GRKIRGPYCR C+S D+IVK +VPYGAKLLCQELFSMGISLKFE
Sbjct: 1141 QNCKNAANVIERTVAAGRKIRGPYCRVCQSGDEIVKVSVPYGAKLLCQELFSMGISLKFE 1200
Query: 177 TQLC 166
TQLC
Sbjct: 1201 TQLC 1204
>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1181
Score = 1478 bits (3827), Expect = 0.0
Identities = 721/958 (75%), Positives = 809/958 (84%), Gaps = 4/958 (0%)
Frame = -3
Query: 3030 ICKKRLWISNNQPLQVAYQSELKRNRLIIRLAS----DASRGGEKVLTVYFLSTEIPVWI 2863
IC KRLWISN+Q V+Y+SE+KRNRLI+RL + +G +K L VYFLSTEIP+WI
Sbjct: 234 ICMKRLWISNSQGWTVSYKSEVKRNRLIVRLVELSKLEYIKGEKKGLCVYFLSTEIPLWI 293
Query: 2862 LFFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCEHFRGGKNALSFVDKRIKR 2683
LFF+LG+ D+EV+DLIDY + DASI NI FASIHDA+E CEHFR AL +VDK +K+
Sbjct: 294 LFFALGVRSDKEVIDLIDYASNDASIVNIFFASIHDADEKCEHFRREDRALDYVDKLLKK 353
Query: 2682 TTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNKXXX 2503
T FPP E+IE I YLFP L + KARFLGYMVKCLL+A++G RKC+NRD F+NK
Sbjct: 354 TRFPPKESIEDAISAYLFPRLNSRRHKARFLGYMVKCLLEAYTGHRKCDNRDSFRNKRFE 413
Query: 2502 XXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFSTGAW 2323
LK H+SHA RRM KALQRDLY DR VHPIEHYLDASI+TNGL+RAFSTGAW
Sbjct: 414 LASELLERELKVHVSHALRRMTKALQRDLYGDRDVHPIEHYLDASIVTNGLTRAFSTGAW 473
Query: 2322 CHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVCFLS 2143
CHP+K MER+SGVV +GRANPLQTMID+R+TRQQV YTGKVGDARYPHPSHWG+VCFLS
Sbjct: 474 CHPFKWMERVSGVVGNLGRANPLQTMIDLRKTRQQVLYTGKVGDARYPHPSHWGRVCFLS 533
Query: 2142 TPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNGEWV 1963
TPDGENCGLVKNLA TG+VSTN+ + ++ +++ GMEKLVDDT+TKL GK KVFLNGEWV
Sbjct: 534 TPDGENCGLVKNLAVTGVVSTNISESLVDKLFDSGMEKLVDDTYTKLDGKHKVFLNGEWV 593
Query: 1962 GVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLRKIK 1783
GVC+DS FV LP+QVEIKR+ Q EV I+SDAGRILRPLLVVENL KIK
Sbjct: 594 GVCEDSCLFVGELRSMRRRRELPYQVEIKRDEQQREVRIFSDAGRILRPLLVVENLDKIK 653
Query: 1782 SLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDMSFL 1603
+ K G Y F LLDKGI+E IG EEEEDC AW +K+L + G +KY+HCELDMSFL
Sbjct: 654 AFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKFLLADIEGKQPMKYSHCELDMSFL 713
Query: 1602 LGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTM 1423
LGLSCGI+PFANHDHARRVLYQ+QKH QQAIGFSTTNPNIRVDTLSHQLHYPQ+PLFRTM
Sbjct: 714 LGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLHYPQRPLFRTM 773
Query: 1422 TSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMFRSE 1243
SDCL +PKPE +NGQNAIVAVNVHLGYNQEDS+VMNR+SLERGMFRSE
Sbjct: 774 ISDCL-----------VLPKPELFNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSE 822
Query: 1242 HIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDIVIG 1063
HIRSYKAEVDNKE +DKRRK++D I FGK+QSKIGRVDSLDDDGFPF+GAN+QSGDIVIG
Sbjct: 823 HIRSYKAEVDNKELTDKRRKSEDSITFGKIQSKIGRVDSLDDDGFPFIGANMQSGDIVIG 882
Query: 1062 RCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKG 883
+CA+SGADHSVKLKHTERG VQKVVLSSND+GKNFAVVSLRQVRSPCLGDKFSSMHGQKG
Sbjct: 883 KCAESGADHSVKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKG 942
Query: 882 VLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHATPFS 703
VLGFLE QENFPFT+QG+VPDIVINPHAFPSRQTPGQ ++ATPFS
Sbjct: 943 VLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYATPFS 1002
Query: 702 TLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKFRNT 523
TLSVDDI QLHRA FS+WGNERVY+G TGEM+RSLIFMGPTFYQRLVHM+EDKVKFRNT
Sbjct: 1003 TLSVDDIIDQLHRAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNT 1062
Query: 522 GPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQKCKN 343
GPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSDSS+M+ICQKCKN
Sbjct: 1063 GPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSEMHICQKCKN 1122
Query: 342 VANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQL 169
VANVIQR +PGGRKIRGPYCR CESVDD+VK +VPYGAKLLCQELFSMGISLKF+T++
Sbjct: 1123 VANVIQRGVPGGRKIRGPYCRVCESVDDLVKVSVPYGAKLLCQELFSMGISLKFDTRV 1180
>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Cucumis
sativus] gi|700200271|gb|KGN55429.1| hypothetical protein
Csa_4G651950 [Cucumis sativus]
Length = 1197
Score = 1477 bits (3823), Expect = 0.0
Identities = 722/961 (75%), Positives = 813/961 (84%), Gaps = 6/961 (0%)
Frame = -3
Query: 3030 ICKKRLWISNNQPLQVAYQSELKRNRLIIRLASDAS----RGGEKVLTVYFLSTEIPVWI 2863
IC +RLWISN Q VAY+SE+KRNRLIIRL ++ + EKVL VYFLSTE+PVWI
Sbjct: 240 ICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKSEDLKSKEKVLNVYFLSTEVPVWI 299
Query: 2862 LFFSLGISCDREVMDLIDYENPDASISNILFASIH--DANENCEHFRGGKNALSFVDKRI 2689
LFF+LG+S D+E++DLIDY D ++ NILFAS+ D ++ + FR GK AL+F+D I
Sbjct: 300 LFFALGVSSDKEIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKRALTFLDNEI 359
Query: 2688 KRTTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNKX 2509
++T+FPP + IE C+ YLF +LKG KQK FLGYMVKCLLQA++GRRKC+NRDDF+NK
Sbjct: 360 RKTSFPPADKIEDCLNLYLFASLKGSKQKCHFLGYMVKCLLQAYTGRRKCDNRDDFRNKR 419
Query: 2508 XXXXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFSTG 2329
LK H++HARRRM KALQRDLY DR VHPIEHYLDASIITNGLSRAFSTG
Sbjct: 420 FELAAELLERELKVHIAHARRRMEKALQRDLYGDRQVHPIEHYLDASIITNGLSRAFSTG 479
Query: 2328 AWCHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVCF 2149
AW H +KRMERISGVVAT+GRANPLQTM ++RRTRQQV YTGKVGDARYPHPSHWG+VCF
Sbjct: 480 AWAHAFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCF 539
Query: 2148 LSTPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNGE 1969
LSTPDGENCGL+KNL+ TGLVS N K I ++ CGME LVD+T T GK ++FL+GE
Sbjct: 540 LSTPDGENCGLIKNLSGTGLVSLNTKKSITPTLFRCGMENLVDNTSTSFCGKYRIFLDGE 599
Query: 1968 WVGVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLRK 1789
WVGVC+DSL+FV HQVE+KR+ Q EV I+SDAGRILRPLLVVENL +
Sbjct: 600 WVGVCEDSLSFVTNVRRKRRRNPFLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNR 659
Query: 1788 IKSLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDMS 1609
I K YTF+ LLDKGI+ELIG EEEEDCRVAW +K+L MED GT+ KY+HCELDMS
Sbjct: 660 IDKSKGENYTFQSLLDKGIIELIGTEEEEDCRVAWSIKHL-MEDEGTT--KYSHCELDMS 716
Query: 1608 FLLGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLFR 1429
FLLGLSCG+VPFANHDHARR L+QSQKH QAIGFS TN N RVDTLSHQLHYPQ+PLFR
Sbjct: 717 FLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSPTNSNFRVDTLSHQLHYPQRPLFR 776
Query: 1428 TMTSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMFR 1249
TMT+DCLG P H G +PKPEFYNGQNAIVAVNVHLGYNQEDS+VMNR+SLERGMFR
Sbjct: 777 TMTADCLGTPGYLSSHAGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFR 836
Query: 1248 SEHIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDIV 1069
SEHIRSYKAEVDNKESS+KRRK+DD INFGK QSKIGRVDSLDDDGFP++GANLQSGDIV
Sbjct: 837 SEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIV 896
Query: 1068 IGRCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQ 889
IGRCA+SGADHS+KLKHTE+G VQKVVLSSNDDGKN+AVVSLRQVRSPCLGDKFSSMHGQ
Sbjct: 897 IGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQ 956
Query: 888 KGVLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHATP 709
KGVLGFLE QENFPFT+QGIVPDIVINPHAFPSRQTPGQ +K+ATP
Sbjct: 957 KGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATP 1016
Query: 708 FSTLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKFR 529
FST SVD IT QLHRAGFS+WG+ERVY+G TGEM+RSLIFMGPTFYQRL+HM+EDKVKFR
Sbjct: 1017 FSTPSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFR 1076
Query: 528 NTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQKC 349
NTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSDSSQM++CQKC
Sbjct: 1077 NTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKC 1136
Query: 348 KNVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQL 169
KNVA+VIQR++ GGRK+RGPYCR CES DDIV+ NVPYGAKLLCQELFSMGI+LKFETQL
Sbjct: 1137 KNVASVIQRSVAGGRKMRGPYCRVCESFDDIVRVNVPYGAKLLCQELFSMGINLKFETQL 1196
Query: 168 C 166
C
Sbjct: 1197 C 1197
>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Vitis vinifera] gi|731386102|ref|XP_010648748.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
2-like [Vitis vinifera]
Length = 1198
Score = 1475 bits (3818), Expect = 0.0
Identities = 713/962 (74%), Positives = 821/962 (85%), Gaps = 7/962 (0%)
Frame = -3
Query: 3030 ICKKRLWISNNQPLQVAYQSELKRNRLIIRLA---SDASRGGEKVLTVYFLSTEIPVWIL 2860
IC KRLW+S+N VAY+ KR R+ ++L + +RGGEKVLTVYF STEIP+WIL
Sbjct: 238 ICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNRGGEKVLTVYFSSTEIPIWIL 297
Query: 2859 FFSLGISCDREVMDLIDYENPDASISNILFASIHDANENCE----HFRGGKNALSFVDKR 2692
FF+LG S D+EV+DLID+ DA ISNIL ASIH+A+ E +FR NA+SFVDK
Sbjct: 298 FFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKL 357
Query: 2691 IKRTTFPPGENIEQCIENYLFPNLKGLKQKARFLGYMVKCLLQAFSGRRKCNNRDDFKNK 2512
+K FPPGE+I++CI YLFPN G+KQKARFLGYMVKCLLQA++GRRKC+NRDDF+NK
Sbjct: 358 VKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNK 417
Query: 2511 XXXXXXXXXXXXLKAHLSHARRRMAKALQRDLYADRTVHPIEHYLDASIITNGLSRAFST 2332
L+ H+ HA RRM KA+QR+LY DR + PIE+YLDASIITNGLSRAFST
Sbjct: 418 RLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFST 477
Query: 2331 GAWCHPYKRMERISGVVATVGRANPLQTMIDMRRTRQQVQYTGKVGDARYPHPSHWGKVC 2152
G W HP+KRMERISGVVAT+ R NPLQ DMR+TRQQVQYTGKVGDARYPHPSHWGKVC
Sbjct: 478 GQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVC 537
Query: 2151 FLSTPDGENCGLVKNLATTGLVSTNVLKPILSEMYHCGMEKLVDDTFTKLTGKDKVFLNG 1972
FLSTPDGENCGLVKNLA TGLVST VL P++ +++ CGMEKLVDDT TKL+GK+KVFL+G
Sbjct: 538 FLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDTSTKLSGKNKVFLDG 597
Query: 1971 EWVGVCDDSLTFVMXXXXXXXXXXLPHQVEIKREGQHGEVHIYSDAGRILRPLLVVENLR 1792
+WVGVC+D ++FV+ LP QVEIKR+ Q GEV I+SDAGRILRPLLVVENL+
Sbjct: 598 DWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRILRPLLVVENLK 657
Query: 1791 KIKSLKEGKYTFRCLLDKGIVELIGAEEEEDCRVAWDVKYLFMEDGGTSQIKYTHCELDM 1612
K+K+ K +TF+ LLDKGIVELIGAEEEEDC AW +KYL ++ +KYTHCELDM
Sbjct: 658 KVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYL-LKGHDDPPVKYTHCELDM 716
Query: 1611 SFLLGLSCGIVPFANHDHARRVLYQSQKHCQQAIGFSTTNPNIRVDTLSHQLHYPQKPLF 1432
SFLLGLSCGI+P+ANHDHARRVLYQS+KH QQAIGFSTTNPNIRVDTLSHQL+YPQ+PLF
Sbjct: 717 SFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLF 776
Query: 1431 RTMTSDCLGKPRSPLGHKGFMPKPEFYNGQNAIVAVNVHLGYNQEDSIVMNRSSLERGMF 1252
RTM SDCLGKP GHKG +P+PE++NGQ AIVAVNVHLGYNQEDS+VMNR+SLERGMF
Sbjct: 777 RTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGMF 836
Query: 1251 RSEHIRSYKAEVDNKESSDKRRKADDCINFGKLQSKIGRVDSLDDDGFPFVGANLQSGDI 1072
RSEHIRSYK+EVDN ES DK+RK++D ++FGK+QSKIGRVDSLDDDGFPF+GANLQ+GDI
Sbjct: 837 RSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGFPFIGANLQNGDI 896
Query: 1071 VIGRCADSGADHSVKLKHTERGRVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHG 892
VIGRCA+SG DHS+KLKHTERG VQKVV+S+NDDGKNFAVVSLRQVR+PCLGDKFSSMHG
Sbjct: 897 VIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLGDKFSSMHG 956
Query: 891 QKGVLGFLEYQENFPFTVQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXLMKHAT 712
QKGVLGFLE QENFPFT+QGIVPDIVINPHAFPSRQTPGQ L++HAT
Sbjct: 957 QKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRHAT 1016
Query: 711 PFSTLSVDDITAQLHRAGFSKWGNERVYSGCTGEMIRSLIFMGPTFYQRLVHMSEDKVKF 532
PFSTLSVD I QLHRAGFS+WG+ERVY+G TGEM+RSLIFMGPTFYQRL+HM+EDKVKF
Sbjct: 1017 PFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKF 1076
Query: 531 RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMYICQK 352
RNTGPVHPLTRQPV+DRKRFGG+KFGEMERDCL+AHGA+ANLHERLFTLSDS+ M+IC++
Sbjct: 1077 RNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRR 1136
Query: 351 CKNVANVIQRALPGGRKIRGPYCRACESVDDIVKANVPYGAKLLCQELFSMGISLKFETQ 172
CKN++NVIQR++ GGRK+RGPYCR CES ++IVK NVPYGAKLLCQELFSMGISLKFETQ
Sbjct: 1137 CKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQ 1196
Query: 171 LC 166
LC
Sbjct: 1197 LC 1198