BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ziziphus21_contig00001641
         (1377 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010099361.1| DNA-directed RNA polymerase III subunit RPC5...   457   e-125
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ...   370   1e-99
ref|XP_008453719.1| PREDICTED: DNA-directed RNA polymerase III s...   367   2e-98
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   365   7e-98
ref|XP_012079063.1| PREDICTED: DNA-directed RNA polymerase III s...   363   2e-97
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   359   4e-96
ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prun...   355   5e-95
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   354   1e-94
ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III s...   354   1e-94
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p...   352   3e-94
ref|XP_011025735.1| PREDICTED: DNA-directed RNA polymerase III s...   351   1e-93
ref|XP_008241882.1| PREDICTED: DNA-directed RNA polymerase III s...   350   2e-93
ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III s...   348   8e-93
ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III s...   348   8e-93
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   342   6e-91
ref|XP_007046992.1| Transcription regulators,zinc ion binding, p...   341   1e-90
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   339   4e-90
gb|KDO79499.1| hypothetical protein CISIN_1g0055731mg, partial [...   338   5e-90
ref|XP_012491679.1| PREDICTED: DNA-directed RNA polymerase III s...   337   2e-89
ref|XP_012491680.1| PREDICTED: DNA-directed RNA polymerase III s...   337   2e-89

>ref|XP_010099361.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
            gi|587889203|gb|EXB77882.1| DNA-directed RNA polymerase
            III subunit RPC5 [Morus notabilis]
          Length = 732

 Score =  457 bits (1175), Expect = e-125
 Identities = 239/379 (63%), Positives = 280/379 (73%), Gaps = 1/379 (0%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            RYL +M  QE +PLQFT++PYDY++SLCPGS  N    KG             R++ LL 
Sbjct: 297  RYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPKGPSRRALLSLPLEERIKSLLC 356

Query: 1197 EGAA-VHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAA 1021
            EG A VH+F+ LKHFAPDCT + ILD LQ +A+LVQGLWA KS LL    +KE   QR A
Sbjct: 357  EGLAPVHRFSVLKHFAPDCTTKEILDALQNHALLVQGLWAPKSSLLLGT-SKETGAQRIA 415

Query: 1020 RDYVLLLFKKSPVISFSLLKVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKLY 841
            RDYVLLLF K+PV SFS L  P SLK  VNKFLNI   ERPSVKDWKFK  TD SFIK Y
Sbjct: 416  RDYVLLLFWKNPVFSFSSLHFPSSLKTAVNKFLNILGVERPSVKDWKFKGQTDISFIKNY 475

Query: 840  PDVVEKQEEVWAELERMVMKSFDDGKSVHGAKNTSMTSRPGRPSNSDKGITKTVTVVPSG 661
            PDVV+KQEEVW +LER +M  F DGKS  G KNTS+ SRP +P NS+KG+ K  + V  G
Sbjct: 476  PDVVKKQEEVWGDLERDIMNMFGDGKSGRGPKNTSIPSRPVKPLNSNKGVPKGTSEVVGG 535

Query: 660  KTIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDARIVKAAEYGT 481
            K IPDDIRE L +K+LPKVIQ++KVCS QL+CQGLR+LAL K NLPK D R  +AA  GT
Sbjct: 536  KKIPDDIREVLCSKILPKVIQEHKVCSLQLMCQGLRELALNKLNLPKADDRFARAAACGT 595

Query: 480  DCPDELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQNGPNAKLKKAEVFDA 301
              P EL KL+D+ A+NIHG+YV KSS++H QYDP RNVVIDLLRQNG  AKLKKAE+FDA
Sbjct: 596  ASPGELVKLLDETAINIHGLYVLKSSAEHPQYDPFRNVVIDLLRQNGLAAKLKKAEIFDA 655

Query: 300  ARKALKREVSSSEYSKIMN 244
            A+ ALKR+V+S+EYSK  N
Sbjct: 656  AKNALKRDVTSNEYSKPNN 674


>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
            gi|508699252|gb|EOX91148.1| SIN-like family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  370 bits (951), Expect = 1e-99
 Identities = 203/405 (50%), Positives = 277/405 (68%), Gaps = 9/405 (2%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            +YL+RM+A+E   +QFT++PYDY+DSLCPG++NN+ +++G             R++KLLS
Sbjct: 308  QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 366

Query: 1197 EGAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAAR 1018
            EG   H+F+ALKHFAPD + E I +VLQ++A+LVQGLW  KS LLFP    E+  +  AR
Sbjct: 367  EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFP----EDPYKSLAR 422

Query: 1017 DYVLLLFKKSPVISFSLL-KVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKLY 841
            DYVLLLF K+P+IS + +  + PS K  V  FL I A ERPS KDWK KE  D+ F KLY
Sbjct: 423  DYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLY 482

Query: 840  PDVVEKQEEVWAELERMVMKSFDDGKSVHGAKNTSMTSRPG------RPSNSDKGITKTV 679
            PD+V+ QE++W   E  V+          GAK     ++PG      +  NSDKG+ +  
Sbjct: 483  PDIVKNQEQIWRAGEDNVINHI-----CRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVA 537

Query: 678  TVVPSGKTIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDARIVK 499
              V +G+T+ D+ REA+  K L KV Q +KVCS QLI +GLRDLAL++S LPK DAR+V 
Sbjct: 538  PAVQAGRTMSDETREAI-PKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVV 596

Query: 498  AAEYGTDCPD-ELRKLVDQVAVNIH-GVYVAKSSSDHLQYDPLRNVVIDLLRQNGPNAKL 325
             A YG D P+ EL+++V +VAV +H G++V +SS +H +YDPLR VVI+LLR  G   KL
Sbjct: 597  KAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVKG---KL 653

Query: 324  KKAEVFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDGR 190
            KKA+V  AA  +LKRE+S++EY+K+M++FC +K S W LKSGDG+
Sbjct: 654  KKADVSAAALLSLKREISNNEYNKVMSDFCEYKSSWWVLKSGDGK 698


>ref|XP_008453719.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Cucumis melo]
          Length = 702

 Score =  367 bits (941), Expect = 2e-98
 Identities = 196/402 (48%), Positives = 268/402 (66%), Gaps = 5/402 (1%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            R+L+ MV+Q  +P+QF+++P+DY+DSLCPG++ +  + KG             R++KLL+
Sbjct: 305  RHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSSNKPKGPSKKYLLSLSLEERIKKLLT 364

Query: 1197 EGAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAAR 1018
            EG  V +F+ALKH+APD  AE  L+ LQ+ A LVQGLW  KS  L P    ++   R AR
Sbjct: 365  EGPPVQRFSALKHYAPDYEAEEFLEALQQYAQLVQGLWVPKSLFLIP----QDGSGRCAR 420

Query: 1017 DYVLLLFKKSPVISFSLLKVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKLYP 838
            D+VL LF K+PV+S S + VP SL++ V  FLN+F  ERP+ KDWKFKE TD SF+  + 
Sbjct: 421  DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDHSFLSNHV 480

Query: 837  DVVEKQEEVWAELERMV--MKSFDDGKSVHGAKNT-SMTSRPGRPSNSDKGITKTVTVVP 667
             +V+KQEE W  +E+ +  ++S   G           +  +P +  + DK  TK+     
Sbjct: 481  KIVQKQEEGWNAMEKALPFLRSMKSGPHTTATTGKPDVVPKPEKQVSCDKTTTKSSNAPL 540

Query: 666  SGK-TIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDARIVKAAE 490
            + K  + D+ REAL  K L K+ Q++KVCSFQLICQGLRDLA+++S LPK DAR+  AA 
Sbjct: 541  NRKGAMSDETREALP-KALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAA 599

Query: 489  YGTDCP-DELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQNGPNAKLKKAE 313
            YG D P +EL+K++ QVA  IHG+YV  SS +H +YDPLR VVI LLR  GP A LKKA+
Sbjct: 600  YGVDAPPEELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKAD 659

Query: 312  VFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDGRS 187
            V +A+++ L R ++S+EYSK+MNE CV  GS WTLKSGDG S
Sbjct: 660  VLEASKRELGRAINSNEYSKVMNEICVSHGSSWTLKSGDGNS 701


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Cucumis sativus] gi|700198105|gb|KGN53263.1|
            hypothetical protein Csa_4G038800 [Cucumis sativus]
          Length = 702

 Score =  365 bits (936), Expect = 7e-98
 Identities = 197/407 (48%), Positives = 268/407 (65%), Gaps = 10/407 (2%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            R+L+ MV+Q  +P+QF+++P+DY+DSLCPG++ +  + KG             R++KLL+
Sbjct: 305  RHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIKKLLT 364

Query: 1197 EGAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAAR 1018
            EG  V +F+ALKH+APD   E  ++ LQ+ A LVQGLW  KS  L P    ++   R AR
Sbjct: 365  EGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIP----QDGSGRCAR 420

Query: 1017 DYVLLLFKKSPVISFSLLKVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKLYP 838
            D+VL LF K+PV+S S + VP SL++ V  FLN+F  ERP+ KDWKFKE TD+ F+  + 
Sbjct: 421  DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV 480

Query: 837  DVVEKQEEVWAELER--MVMKSFDDGKSVHGAKNTSMTSRPGRPSNSDKGITKTVTVVPS 664
             + EKQEE+W  +E+    ++S    KSVH A   + T +PG     +K ++   T   S
Sbjct: 481  RIAEKQEELWNNVEKGFTFLRSI---KSVHHAN--AATGKPGVVPKLEKQVSSDQTTTKS 535

Query: 663  GKT-------IPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDARI 505
                      + D+ REAL  K L K+ Q++KVCSFQLICQGLRDLA+++S LPK DAR+
Sbjct: 536  SNAPLNRKGAMSDETREALP-KALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARM 594

Query: 504  VKAAEYGTDCP-DELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQNGPNAK 328
              AA YG D P DEL+K++ QVA  IHG+YV  SS +H +YDPLR VVI LLR  GP A 
Sbjct: 595  AVAAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAV 654

Query: 327  LKKAEVFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDGRS 187
            LKKA+V +A++  L R ++S+EYSK+MNE C+  GS WTLKSGDG S
Sbjct: 655  LKKADVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNS 701


>ref|XP_012079063.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Jatropha
            curcas] gi|802640898|ref|XP_012079065.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC5 [Jatropha
            curcas] gi|643721913|gb|KDP31792.1| hypothetical protein
            JCGZ_12253 [Jatropha curcas]
          Length = 720

 Score =  363 bits (932), Expect = 2e-97
 Identities = 200/402 (49%), Positives = 275/402 (68%), Gaps = 7/402 (1%)
 Frame = -1

Query: 1374 YLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLSE 1195
            YL++M+A+E +P++FT++PYDY+ SLCP ++NN  +SKG             RM+KLL E
Sbjct: 321  YLQKMMAEEGSPMEFTMSPYDYMSSLCPVASNN-AKSKGPSRRFLLSLPLEERMKKLLIE 379

Query: 1194 GAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAARD 1015
            G  V +F+ LKHFAP+ T E +L V+Q++  LVQGLWA ++ LLFP  +KE + +  ARD
Sbjct: 380  GPPVQRFSVLKHFAPEDTVEDVLTVVQKHGQLVQGLWAPRTALLFP-DSKEVY-KPPARD 437

Query: 1014 YVLLLFKKSPVISFS-LLKVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKLYP 838
            Y+LLLF KS VIS S +  +P  LK  V  FLN+FA ERPS +DWKFKE  D +F+KL+P
Sbjct: 438  YILLLFSKSLVISTSQITSLPARLKEPVRAFLNLFAVERPSFRDWKFKESPDAAFMKLHP 497

Query: 837  DVVEKQEEVWAELERMV---MKSFDDGKSVHGAKNTSMTSRPGRPSNSDKGITKTVTV-- 673
            +VV+KQ  +W  +E+ +   + S   G   +  +  ++     +  +  K   K+ +V  
Sbjct: 498  EVVKKQVVIWEGVEKKLTGFLSSSSKGGKQNDKRQPTLAHNLTKELDPHKIAPKSASVNR 557

Query: 672  VPSGKTIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDARIVKAA 493
            VP   TI  + REAL  KVLPKV+Q +KVCSF+LI QGLRDLA+++S LPK D RI K A
Sbjct: 558  VPIRTTITSESREAL-LKVLPKVLQTHKVCSFELIRQGLRDLAVSQSTLPKADPRIAKLA 616

Query: 492  EYGTDCP-DELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQNGPNAKLKKA 316
              G D P +EL++++ +VA NIHG YV KSS DH QYD LR VVIDLL   GPNAKLKK+
Sbjct: 617  ADGADAPLEELQEIISEVATNIHGSYVLKSSPDHPQYDVLRKVVIDLLLARGPNAKLKKS 676

Query: 315  EVFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDGR 190
            EV++AA+  LKR+++++EY+K+M +FC  K S W LKSGDG+
Sbjct: 677  EVYEAAKLVLKRDINTTEYTKVMTDFCESKASAWVLKSGDGK 718


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  359 bits (921), Expect = 4e-96
 Identities = 200/386 (51%), Positives = 256/386 (66%), Gaps = 10/386 (2%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            RYLE+M+AQE +P++FT+ PYDY+ SLCP ++N   +SKG             R++KL+ 
Sbjct: 285  RYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLIL 344

Query: 1197 EGAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAAR 1018
            EG  V +F+ LKHFAPD + E +L VLQ    LVQGLWA KS LLFP    +   ++  R
Sbjct: 345  EGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLFP----DANSKQGIR 400

Query: 1017 DYVLLLFKKSPVISFSLLKVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKLYP 838
            DYVLLLF K+ VI+ S +  P  +K  +  FLN+FA ERPS KDWKFKE TD +FIKLYP
Sbjct: 401  DYVLLLFSKNLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYP 460

Query: 837  DVVEKQEEVWAELERMVMKSFD-DGKSVHGAKNTSMTSRPGRPSNSDKGI--TKTVTVVP 667
            D+V+KQEE W   E+ + K FD  GK    A   +   +P    N+ K +   K++  + 
Sbjct: 461  DIVKKQEEAWDNTEKRLSKVFDRSGK----ASMKNAIPKPPMVHNTVKHLDSEKSMPKIA 516

Query: 666  SG------KTIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDARI 505
            SG       TI  + REAL  K LPKV Q +KVCSFQLICQGLRDLA+++S LPK D RI
Sbjct: 517  SGMRRLTKTTITVETREAL-LKALPKVFQSHKVCSFQLICQGLRDLAVSQSTLPKADPRI 575

Query: 504  VKAAEYGTDC-PDELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQNGPNAK 328
              AA  G D  P+EL++++ QVA NIHG YV KSS +H QYD LR V+IDLL   GPNAK
Sbjct: 576  AVAAASGADAPPEELQEIISQVATNIHGFYVLKSSPEHPQYDELRKVIIDLLLARGPNAK 635

Query: 327  LKKAEVFDAARKALKREVSSSEYSKI 250
            LKKAEVF+AAR A KR+V++ EY+K+
Sbjct: 636  LKKAEVFEAARLAFKRDVTNIEYNKL 661


>ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
            gi|462397466|gb|EMJ03134.1| hypothetical protein
            PRUPE_ppa002228mg [Prunus persica]
          Length = 698

 Score =  355 bits (911), Expect = 5e-95
 Identities = 195/406 (48%), Positives = 278/406 (68%), Gaps = 11/406 (2%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            +YL RMV QE +P+QFT++PYDY++SLCP +       KG             R++KLL 
Sbjct: 299  KYLRRMVGQESSPIQFTMSPYDYVNSLCPRT------CKGSSRRFLLSLPLEERIKKLLV 352

Query: 1197 EGAAVHKFNALK-HFAPDCTAEAILDVLQRNA--ILVQGLWALKSRLLFP---LPTKENF 1036
            E     +F+ LK +FAPD T E +LDVLQ++A  +L  GLW  K+ LL+P   +  +++ 
Sbjct: 353  EEPLARRFSDLKKYFAPDHTGEELLDVLQKHAQLLLDSGLWVPKTLLLYPSKDMKDRDHV 412

Query: 1035 MQRAARDYVLLLFKKSPVISFSLLKVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQS 856
             ++ AR+YVL LF+K+ VIS S L +P + KN   + L I A  RPS +DWK KE +D+S
Sbjct: 413  ARQTARNYVLNLFRKNTVISNSQLNLPQNHKNHAYESLKILAVSRPSSQDWKLKEQSDKS 472

Query: 855  FIKLYPDVVEKQEEVWAELERMVMKSFDDGKSVHGAKNTSMTSRPGRPSNSDKGITKTVT 676
            F +LYPD+ + QE+ W  +E  ++ +F    +  G KN  MTS+PG+  NSDKG TK+ +
Sbjct: 473  FKELYPDIFKSQEQNWERMEEKLVNAFK-AHTDRGVKNACMTSKPGKSLNSDKGTTKSAS 531

Query: 675  VVP-SGKTIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDA---R 508
             V   G+T+ D+ R AL  + + +V+ ++KVC+F+LIC+GLR LA+ KS+LPKVD    R
Sbjct: 532  DVQIGGRTMSDETRAALP-EAIKEVLHEHKVCNFRLICEGLRRLAVRKSSLPKVDPKTKR 590

Query: 507  IVKAAEYGTDCPD-ELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQNGPNA 331
            ++ AA YG D P  EL+K++ QVA +IHG+YV KSS +H ++D LR VVIDLL   GPNA
Sbjct: 591  VIDAA-YGVDAPQHELQKVICQVAADIHGLYVLKSSPEHSEHDRLRKVVIDLLCTKGPNA 649

Query: 330  KLKKAEVFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDG 193
            KLK+ EVF+AA+ AL+R+++++EY+K+MN+FCVFKGS W LKSGDG
Sbjct: 650  KLKRGEVFEAAKIALERDINTNEYNKVMNDFCVFKGSAWILKSGDG 695


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X4
            [Vitis vinifera]
          Length = 672

 Score =  354 bits (908), Expect = 1e-94
 Identities = 192/407 (47%), Positives = 267/407 (65%), Gaps = 11/407 (2%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCP-GSNNNDVRSKGXXXXXXXXXXXXXRMQKLL 1201
            RYL++MVA++ +P+QF ++PY+Y++SLCP G +N+D RSKG             R + LL
Sbjct: 274  RYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLL 333

Query: 1200 SEGAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAA 1021
             EG  VH+F+ALKHFAPD + E +L VL ++A LVQGLW  KS LLFP       +   A
Sbjct: 334  CEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFP---GGQGVAPLA 390

Query: 1020 RDYVLLLFKKSPVISFSLLKVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKLY 841
            RDY+LLLF K P+I++S + VP SL   +  FL+I A ERPS +DWKFKEPTD SF+KL+
Sbjct: 391  RDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLH 450

Query: 840  PDVVEKQEEVWAELERMVMKSFDDGKSVHGAKNTSMTSRPGRPSNSDK--------GITK 685
            PD+V +Q  VW  LE+ +           G +   +T   G+PS ++K        G T+
Sbjct: 451  PDIVREQRRVWESLEKQITDIIHG-----GGRRGPVTKNSGKPSIANKTGTSTKSDGATR 505

Query: 684  TVTVVPSGKT-IPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDAR 508
                 P  +T +  + REAL  K L +V + +KVCSFQLICQ LRDLA++KS  PKVD R
Sbjct: 506  ATNGTPVRRTAMSAETREAL-PKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPR 564

Query: 507  IVKAAEYGTDCP-DELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQNGPNA 331
               AA YG D P +EL  ++ + A  +HGVYV K +S+H +++PLR VV+DL     PNA
Sbjct: 565  TFVAAAYGADAPQEELHAIISKYATTVHGVYVWK-TSEHSEHNPLRKVVVDLFCGKEPNA 623

Query: 330  KLKKAEVFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDGR 190
            KLK+A++ +AA+ ALK+E+++ EY+K+++E C  +GSLW LKSGDG+
Sbjct: 624  KLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGDGK 670


>ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
            [Vitis vinifera] gi|297735187|emb|CBI17549.3| unnamed
            protein product [Vitis vinifera]
          Length = 688

 Score =  354 bits (908), Expect = 1e-94
 Identities = 192/407 (47%), Positives = 267/407 (65%), Gaps = 11/407 (2%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCP-GSNNNDVRSKGXXXXXXXXXXXXXRMQKLL 1201
            RYL++MVA++ +P+QF ++PY+Y++SLCP G +N+D RSKG             R + LL
Sbjct: 290  RYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLL 349

Query: 1200 SEGAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAA 1021
             EG  VH+F+ALKHFAPD + E +L VL ++A LVQGLW  KS LLFP       +   A
Sbjct: 350  CEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFP---GGQGVAPLA 406

Query: 1020 RDYVLLLFKKSPVISFSLLKVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKLY 841
            RDY+LLLF K P+I++S + VP SL   +  FL+I A ERPS +DWKFKEPTD SF+KL+
Sbjct: 407  RDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLH 466

Query: 840  PDVVEKQEEVWAELERMVMKSFDDGKSVHGAKNTSMTSRPGRPSNSDK--------GITK 685
            PD+V +Q  VW  LE+ +           G +   +T   G+PS ++K        G T+
Sbjct: 467  PDIVREQRRVWESLEKQITDIIHG-----GGRRGPVTKNSGKPSIANKTGTSTKSDGATR 521

Query: 684  TVTVVPSGKT-IPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDAR 508
                 P  +T +  + REAL  K L +V + +KVCSFQLICQ LRDLA++KS  PKVD R
Sbjct: 522  ATNGTPVRRTAMSAETREAL-PKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPR 580

Query: 507  IVKAAEYGTDCP-DELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQNGPNA 331
               AA YG D P +EL  ++ + A  +HGVYV K +S+H +++PLR VV+DL     PNA
Sbjct: 581  TFVAAAYGADAPQEELHAIISKYATTVHGVYVWK-TSEHSEHNPLRKVVVDLFCGKEPNA 639

Query: 330  KLKKAEVFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDGR 190
            KLK+A++ +AA+ ALK+E+++ EY+K+++E C  +GSLW LKSGDG+
Sbjct: 640  KLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGDGK 686


>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
            [Theobroma cacao] gi|508699254|gb|EOX91150.1|
            Transcription regulators,zinc ion binding, putative
            isoform 3 [Theobroma cacao]
          Length = 736

 Score =  352 bits (904), Expect = 3e-94
 Identities = 203/441 (46%), Positives = 277/441 (62%), Gaps = 45/441 (10%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            +YL+RM+A+E   +QFT++PYDY+DSLCPG++NN+ +++G             R++KLLS
Sbjct: 308  QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 366

Query: 1197 EGAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAAR 1018
            EG   H+F+ALKHFAPD + E I +VLQ++A+LVQGLW  KS LLFP    E+  +  AR
Sbjct: 367  EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFP----EDPYKSLAR 422

Query: 1017 DYVLLLFKKSPVISFSLL-KVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKLY 841
            DYVLLLF K+P+IS + +  + PS K  V  FL I A ERPS KDWK KE  D+ F KLY
Sbjct: 423  DYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLY 482

Query: 840  PDVVEKQEEVWAELERMVMKSFDDGKSVHGAKNTSMTSRPG------RPSNSDKGITKTV 679
            PD+V+ QE++W   E  V+          GAK     ++PG      +  NSDKG+ +  
Sbjct: 483  PDIVKNQEQIWRAGEDNVINHI-----CRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVA 537

Query: 678  TVVPSGKTIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDARIVK 499
              V +G+T+ D+ REA+  K L KV Q +KVCS QLI +GLRDLAL++S LPK DAR+V 
Sbjct: 538  PAVQAGRTMSDETREAI-PKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVV 596

Query: 498  AAEYGTDCPD-ELRKLVDQVAVNIH-GVYVAKSSSDHLQYDPL----------------- 376
             A YG D P+ EL+++V +VAV +H G++V +SS +H +YDPL                 
Sbjct: 597  KAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLRLHKYVQLVFKWEEMFM 656

Query: 375  -------------------RNVVIDLLRQNGPNAKLKKAEVFDAARKALKREVSSSEYSK 253
                               R VVI+LLR  G   KLKKA+V  AA  +LKRE+S++EY+K
Sbjct: 657  VSMFFLQNPSFSSELFFPCREVVINLLRVKG---KLKKADVSAAALLSLKREISNNEYNK 713

Query: 252  IMNEFCVFKGSLWTLKSGDGR 190
            +M++FC +K S W LKSGDG+
Sbjct: 714  VMSDFCEYKSSWWVLKSGDGK 734


>ref|XP_011025735.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Populus
            euphratica]
          Length = 666

 Score =  351 bits (900), Expect = 1e-93
 Identities = 191/398 (47%), Positives = 253/398 (63%), Gaps = 2/398 (0%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            RYL+ MVA E + ++F ++PYDY+ SLCPG +NN+++  G             R+++L  
Sbjct: 292  RYLQNMVAPESSTIEFAMSPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFL 351

Query: 1197 EGAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAAR 1018
            EG  +H+F AL+H  P+ + E +L VLQ    LVQGLW  K+ LLFP P     ++ AAR
Sbjct: 352  EGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKLAAR 411

Query: 1017 DYVLLLFKKSPVISFSLLKVPPSLKNFVNK-FLNIFATERPSVKDWKFKEPTDQSFIKLY 841
            DY+LLLF KS V++ S L VP  +K  + K FLNIFA ERPS KDWKFKE  D  F++LY
Sbjct: 412  DYILLLFSKSLVVTPSELNVP--MKPLILKSFLNIFAVERPSFKDWKFKENVDTLFVELY 469

Query: 840  PDVVEKQEEVWAELERMVMKSFDDGKSVHGAKNTSMTSRPGRPSNSDKGITKTVTVVPSG 661
            PD+V KQE+ W  + + +  +FD                      + K ++K V   P  
Sbjct: 470  PDIVRKQEQAWEVMGKNISAAFD---------------------RAGKSVSKNVITKPK- 507

Query: 660  KTIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDARIVKAAEYGT 481
            KT+ D+ REAL  K LPKV+Q +KVCSFQ+ICQGLR LA+++S LPK D RI  AA  G 
Sbjct: 508  KTMTDETREAL-RKALPKVLQTHKVCSFQMICQGLRQLAISQSTLPKADPRIAVAAASGA 566

Query: 480  DC-PDELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQNGPNAKLKKAEVFD 304
            +  P+EL++++ +VA NIHG YV KSS +H  +DPLR VVI L    GPNA +KK+EV  
Sbjct: 567  EAPPEELQEVISEVATNIHGFYVLKSSPEHPDFDPLRKVVIGLFLARGPNANIKKSEVQA 626

Query: 303  AARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDGR 190
            AAR  LKRE S+SEY K+M + C  KGS W LKSGDG+
Sbjct: 627  AARLELKREPSNSEYIKVMTDLCESKGSAWVLKSGDGK 664


>ref|XP_008241882.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Prunus mume]
          Length = 696

 Score =  350 bits (897), Expect = 2e-93
 Identities = 194/409 (47%), Positives = 275/409 (67%), Gaps = 14/409 (3%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCP----GSNNNDVRSKGXXXXXXXXXXXXXRMQ 1210
            +YL RMV QE  P+QFT++PYDY++SLCP    GS+   + S G              ++
Sbjct: 299  KYLRRMVGQESFPIQFTMSPYDYVNSLCPRTCKGSSRRFLLSLGCNL-----------LK 347

Query: 1209 KLLSEGAAVHKFNALKHFAPDCTAEAILDVLQRNA--ILVQGLWALKSRLLFP---LPTK 1045
              +SE  A    +  K+FAPD T E +LDVLQ++A  +L  GLW  K+ LL+P   +  +
Sbjct: 348  PHISEPVARRFSDVKKYFAPDHTGEELLDVLQKHAQLLLDSGLWVPKTLLLYPSKDMKDR 407

Query: 1044 ENFMQRAARDYVLLLFKKSPVISFSLLKVPPSLKNFVNKFLNIFATERPSVKDWKFKEPT 865
            ++  ++ AR+YVL LF+K+ VIS S L +P + KN   + L I A  RPS +DWK KE +
Sbjct: 408  DHVTRQTARNYVLNLFRKNTVISNSQLNLPQNHKNHAYESLKILAVSRPSSQDWKLKEQS 467

Query: 864  DQSFIKLYPDVVEKQEEVWAELERMVMKSFDDGKSVHGAKNTSMTSRPGRPSNSDKGITK 685
            D+SF +LYPD+ + QE+ W  +E  +  +F    +  G KN  MTS+PG+  NSDKG TK
Sbjct: 468  DKSFKELYPDIFKSQEQNWERMEEKLANAFK-AHTDRGVKNACMTSKPGKSLNSDKGTTK 526

Query: 684  TVTVVP-SGKTIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDA- 511
            + + V   G+T+ D+ R AL  + + +V+Q++KVC+F+LIC+GLR LA+ KS+LPKVD  
Sbjct: 527  SASDVQIGGRTMSDETRAALP-EAIKEVLQEHKVCNFRLICEGLRRLAVRKSSLPKVDPK 585

Query: 510  --RIVKAAEYGTDCPD-ELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQNG 340
              R++ AA YG D P  EL K++ QVA +IHG+YV KSS +H ++D LR VVIDLL   G
Sbjct: 586  TKRVIDAA-YGVDAPQHELHKVICQVAADIHGLYVLKSSPEHSEHDRLRKVVIDLLCTKG 644

Query: 339  PNAKLKKAEVFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDG 193
            PNAKLK+ EVF+AA+ AL+R+++++EY+K+MN+FCVFKGS W LKSGDG
Sbjct: 645  PNAKLKRGEVFEAAKIALQRDINTNEYNKVMNDFCVFKGSAWILKSGDG 693


>ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
            [Vitis vinifera]
          Length = 677

 Score =  348 bits (892), Expect = 8e-93
 Identities = 192/412 (46%), Positives = 267/412 (64%), Gaps = 16/412 (3%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCP-GSNNNDVRSKGXXXXXXXXXXXXXRMQKLL 1201
            RYL++MVA++ +P+QF ++PY+Y++SLCP G +N+D RSKG             R + LL
Sbjct: 274  RYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLL 333

Query: 1200 SE-----GAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENF 1036
             E     G  VH+F+ALKHFAPD + E +L VL ++A LVQGLW  KS LLFP       
Sbjct: 334  CEKFSLQGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFP---GGQG 390

Query: 1035 MQRAARDYVLLLFKKSPVISFSLLKVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQS 856
            +   ARDY+LLLF K P+I++S + VP SL   +  FL+I A ERPS +DWKFKEPTD S
Sbjct: 391  VAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVS 450

Query: 855  FIKLYPDVVEKQEEVWAELERMVMKSFDDGKSVHGAKNTSMTSRPGRPSNSDK------- 697
            F+KL+PD+V +Q  VW  LE+ +           G +   +T   G+PS ++K       
Sbjct: 451  FMKLHPDIVREQRRVWESLEKQITDIIHG-----GGRRGPVTKNSGKPSIANKTGTSTKS 505

Query: 696  -GITKTVTVVPSGKT-IPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLP 523
             G T+     P  +T +  + REAL  K L +V + +KVCSFQLICQ LRDLA++KS  P
Sbjct: 506  DGATRATNGTPVRRTAMSAETREAL-PKALEEVFRLHKVCSFQLICQALRDLAVSKSTSP 564

Query: 522  KVDARIVKAAEYGTDCP-DELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQ 346
            KVD R   AA YG D P +EL  ++ + A  +HGVYV K +S+H +++PLR VV+DL   
Sbjct: 565  KVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWK-TSEHSEHNPLRKVVVDLFCG 623

Query: 345  NGPNAKLKKAEVFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDGR 190
              PNAKLK+A++ +AA+ ALK+E+++ EY+K+++E C  +GSLW LKSGDG+
Sbjct: 624  KEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGDGK 675


>ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Vitis vinifera] gi|731387214|ref|XP_010649169.1|
            PREDICTED: DNA-directed RNA polymerase III subunit RPC5
            isoform X1 [Vitis vinifera]
          Length = 693

 Score =  348 bits (892), Expect = 8e-93
 Identities = 192/412 (46%), Positives = 267/412 (64%), Gaps = 16/412 (3%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCP-GSNNNDVRSKGXXXXXXXXXXXXXRMQKLL 1201
            RYL++MVA++ +P+QF ++PY+Y++SLCP G +N+D RSKG             R + LL
Sbjct: 290  RYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLL 349

Query: 1200 SE-----GAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENF 1036
             E     G  VH+F+ALKHFAPD + E +L VL ++A LVQGLW  KS LLFP       
Sbjct: 350  CEKFSLQGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFP---GGQG 406

Query: 1035 MQRAARDYVLLLFKKSPVISFSLLKVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQS 856
            +   ARDY+LLLF K P+I++S + VP SL   +  FL+I A ERPS +DWKFKEPTD S
Sbjct: 407  VAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVS 466

Query: 855  FIKLYPDVVEKQEEVWAELERMVMKSFDDGKSVHGAKNTSMTSRPGRPSNSDK------- 697
            F+KL+PD+V +Q  VW  LE+ +           G +   +T   G+PS ++K       
Sbjct: 467  FMKLHPDIVREQRRVWESLEKQITDIIHG-----GGRRGPVTKNSGKPSIANKTGTSTKS 521

Query: 696  -GITKTVTVVPSGKT-IPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLP 523
             G T+     P  +T +  + REAL  K L +V + +KVCSFQLICQ LRDLA++KS  P
Sbjct: 522  DGATRATNGTPVRRTAMSAETREAL-PKALEEVFRLHKVCSFQLICQALRDLAVSKSTSP 580

Query: 522  KVDARIVKAAEYGTDCP-DELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQ 346
            KVD R   AA YG D P +EL  ++ + A  +HGVYV K +S+H +++PLR VV+DL   
Sbjct: 581  KVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWK-TSEHSEHNPLRKVVVDLFCG 639

Query: 345  NGPNAKLKKAEVFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDGR 190
              PNAKLK+A++ +AA+ ALK+E+++ EY+K+++E C  +GSLW LKSGDG+
Sbjct: 640  KEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGDGK 691


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
            gi|550334731|gb|EEE90658.2| hypothetical protein
            POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  342 bits (876), Expect = 6e-91
 Identities = 191/401 (47%), Positives = 252/401 (62%), Gaps = 5/401 (1%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            RYL+ MVA E + ++F +NPYDY+ SLCPG +NN+++  G             R+++L  
Sbjct: 290  RYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFL 349

Query: 1197 EGAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAAR 1018
            EG  +H+F AL+H  P+ + E +L VLQ    LVQGLW  K+ LLFP P     ++ AAR
Sbjct: 350  EGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKLAAR 409

Query: 1017 DYVLLLFKKSPVISFSLLKVPPSLKNFVNK-FLNIFATERPSVKDWKFKEPTDQSFIKLY 841
            DY+LLLF KS V++ S L VP  +K  + K FLNIFA ERPS KDWKFKE  D  F++LY
Sbjct: 410  DYILLLFSKSLVVTPSELNVP--MKPLILKSFLNIFAVERPSFKDWKFKENVDTLFVELY 467

Query: 840  PDVVEKQEEVWAELERMVMKSFDDGKSVHGAKNTSMTSRPGRPSNSDKGITKTVTVVPSG 661
            PD+V KQE+ W  + + +  +FD                      + K ++K V   P  
Sbjct: 468  PDIVRKQEQAWEVMGKNISAAFD---------------------RAGKSVSKNVITKPK- 505

Query: 660  KTIPDDIREALSTKVLPKVIQDYKVC--SFQLICQGLRDLALTKSNLPKVDARIVKAAEY 487
            KT+ D+ REAL  K LPKV+Q +KVC   FQ+ICQGLR LA+++S LPK D RI  AA  
Sbjct: 506  KTMTDETREAL-RKALPKVLQTHKVCRYGFQMICQGLRQLAISQSTLPKADPRIAVAAAS 564

Query: 486  GTDC-PDELRKLVDQVAVNIHGVYVAKSSSDHLQYDPL-RNVVIDLLRQNGPNAKLKKAE 313
            G +  P+EL++++ +VA NIHG YV KSS +H  +DPL R VVI L    GPNA +KK+E
Sbjct: 565  GAEAPPEELQEVISEVATNIHGFYVLKSSPEHPDFDPLSRKVVIGLFLARGPNANIKKSE 624

Query: 312  VFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDGR 190
            V  AAR  LKRE S+SEY K+M + C  KGS W LKSGDG+
Sbjct: 625  VQAAARLELKREPSNSEYIKVMTDLCESKGSAWVLKSGDGK 665


>ref|XP_007046992.1| Transcription regulators,zinc ion binding, putative isoform 2
            [Theobroma cacao] gi|508699253|gb|EOX91149.1|
            Transcription regulators,zinc ion binding, putative
            isoform 2 [Theobroma cacao]
          Length = 588

 Score =  341 bits (874), Expect = 1e-90
 Identities = 191/386 (49%), Positives = 261/386 (67%), Gaps = 9/386 (2%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            +YL+RM+A+E   +QFT++PYDY+DSLCPG++NN+ +++G             R++KLLS
Sbjct: 211  QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 269

Query: 1197 EGAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAAR 1018
            EG   H+F+ALKHFAPD + E I +VLQ++A+LVQGLW  KS LLFP    E+  +  AR
Sbjct: 270  EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFP----EDPYKSLAR 325

Query: 1017 DYVLLLFKKSPVISFSLL-KVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKLY 841
            DYVLLLF K+P+IS + +  + PS K  V  FL I A ERPS KDWK KE  D+ F KLY
Sbjct: 326  DYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLY 385

Query: 840  PDVVEKQEEVWAELERMVMKSFDDGKSVHGAKNTSMTSRPG------RPSNSDKGITKTV 679
            PD+V+ QE++W   E  V+          GAK     ++PG      +  NSDKG+ +  
Sbjct: 386  PDIVKNQEQIWRAGEDNVINHI-----CRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVA 440

Query: 678  TVVPSGKTIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDARIVK 499
              V +G+T+ D+ REA+  K L KV Q +KVCS QLI +GLRDLAL++S LPK DAR+V 
Sbjct: 441  PAVQAGRTMSDETREAI-PKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVV 499

Query: 498  AAEYGTDCPD-ELRKLVDQVAVNIH-GVYVAKSSSDHLQYDPLRNVVIDLLRQNGPNAKL 325
             A YG D P+ EL+++V +VAV +H G++V +SS +H +YDPLR VVI+LLR  G   KL
Sbjct: 500  KAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVKG---KL 556

Query: 324  KKAEVFDAARKALKREVSSSEYSKIM 247
            KKA+V  AA  +LKRE+S++EY+K +
Sbjct: 557  KKADVSAAALLSLKREISNNEYNKAL 582


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC5-like [Citrus sinensis]
            gi|557527707|gb|ESR38957.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  339 bits (869), Expect = 4e-90
 Identities = 189/400 (47%), Positives = 256/400 (64%), Gaps = 9/400 (2%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            RYL+RM+ +E +P+ FT+NPYDY+ SLCPG+ +N+ +SKG             R +KLL 
Sbjct: 297  RYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKKLLC 356

Query: 1197 EGAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAAR 1018
            EG  V +F+ L HFAP+ T E ++ VL +N +LVQGLWA +S LLF      + M+  AR
Sbjct: 357  EGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLF----NNDKMKCLAR 412

Query: 1017 DYVLLLFKKSPVISFSLLKVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKLYP 838
            DYVLL F K+ V+ F  L V P L++ +  FLNIFA ERP  KDWKF++ TD SFIK +P
Sbjct: 413  DYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHP 472

Query: 837  DVVEKQEEVWAELERMVMKSFDD-GKSVHGAKN----TSMTSRPGRPSNSDKGITKTVTV 673
            ++V KQE+VWA  E+ +    +  GKS    +N    ++M ++  +  NS  G +  +T 
Sbjct: 473  NIVIKQEQVWAAAEKQITDVINKLGKSGSTLRNDAGKSAMVNKHLKAINSSNGPSGALT- 531

Query: 672  VPSGKTIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDARIVKAA 493
                K + ++ REAL  K L K+ Q +KVCS  LI QGLRDLA+++S LPK DAR+   A
Sbjct: 532  --GNKNLSNESREAL-PKALQKLFQIHKVCSLPLIKQGLRDLAISQSTLPKADARMTVLA 588

Query: 492  EYGTDC----PDELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQNGPNAKL 325
                D       E  +++ QVA NIHG YV+KSS D  Q+ PLR VV DLL   GP+AKL
Sbjct: 589  AEIVDSSFVDTQEFAEVISQVATNIHGFYVSKSSEDP-QHGPLRKVVTDLLLAGGPDAKL 647

Query: 324  KKAEVFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLK 205
            KKA+V +AAR  LKRE+S++EYSK+M++ C  KGS W LK
Sbjct: 648  KKADVVEAARHVLKREISNAEYSKVMSDICESKGSAWILK 687


>gb|KDO79499.1| hypothetical protein CISIN_1g0055731mg, partial [Citrus sinensis]
          Length = 425

 Score =  338 bits (868), Expect = 5e-90
 Identities = 189/400 (47%), Positives = 256/400 (64%), Gaps = 9/400 (2%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            RYL+RM+ +E +P+ FT+NPYDY+ SLCPG+ +N+ +SKG             R +KLL 
Sbjct: 32   RYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKKLLC 91

Query: 1197 EGAAVHKFNALKHFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAAR 1018
            EG  V +F+ L HFAP+ T E ++ VL +N +LVQGLWA +S LLF      + M+  AR
Sbjct: 92   EGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLF----NNDKMKCLAR 147

Query: 1017 DYVLLLFKKSPVISFSLLKVPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKLYP 838
            DYVLL F K+ V+ F  L V P L++ +  FLNIFA ERP  KDWKF++ TD SFIK +P
Sbjct: 148  DYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHP 207

Query: 837  DVVEKQEEVWAELERMVMKSFDD-GKSVHGAKN----TSMTSRPGRPSNSDKGITKTVTV 673
            ++V KQE+VWA  E+ +    +  GKS    +N    ++M ++  +  NS  G +  +T 
Sbjct: 208  NIVIKQEQVWAAAEKQITDVINKLGKSGSTLRNDAGKSAMVNKHLKAINSSNGPSGALT- 266

Query: 672  VPSGKTIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDARIVKAA 493
                K + ++ REAL  K L K+ Q +KVCS  LI QGLRDLA+++S LPK DAR+   A
Sbjct: 267  --GNKNLSNESREAL-PKALQKLFQIHKVCSLPLIKQGLRDLAVSQSTLPKADARMTVLA 323

Query: 492  EYGTDC----PDELRKLVDQVAVNIHGVYVAKSSSDHLQYDPLRNVVIDLLRQNGPNAKL 325
                D       E  +++ QVA NIHG YV+KSS D  Q+ PLR VV DLL   GP+AKL
Sbjct: 324  AEIVDSSFVDTQEFAEVISQVATNIHGFYVSKSSEDP-QHGPLRKVVTDLLLAGGPDAKL 382

Query: 324  KKAEVFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLK 205
            KKA+V +AAR  LKRE+S++EYSK+M++ C  KGS W LK
Sbjct: 383  KKADVVEAARHVLKREISNAEYSKVMSDICESKGSAWILK 422


>ref|XP_012491679.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Gossypium raimondii] gi|763776418|gb|KJB43541.1|
            hypothetical protein B456_007G205200 [Gossypium
            raimondii] gi|763776419|gb|KJB43542.1| hypothetical
            protein B456_007G205200 [Gossypium raimondii]
          Length = 703

 Score =  337 bits (863), Expect = 2e-89
 Identities = 193/409 (47%), Positives = 269/409 (65%), Gaps = 13/409 (3%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            +YL++M+A++ +P++FTLNPYDY+DSLCP  +NN+ +++              R++KLL+
Sbjct: 310  QYLQKMMAEQSSPIEFTLNPYDYVDSLCPLPSNNN-KAQRLSRRLLCSIPLEDRLKKLLT 368

Query: 1197 EGAAVHKFNALK-HFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAA 1021
            EG   H FN LK H+APD   E + +VLQ++A+LVQGLW  KS LLFP    ++     A
Sbjct: 369  EGRPFHHFNTLKRHYAPDDPIEEVFEVLQKHALLVQGLWVPKSSLLFPGDPSKSL----A 424

Query: 1020 RDYVLLLFKKSPVISFSLLK-VPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKL 844
            RDYVLLLF K+P IS+  +  +  S K  V  FL I A E P +K WK KE TD++F K 
Sbjct: 425  RDYVLLLFSKNPFISYDKVNNLSTSRKEEVKGFLKILAIESPPLKGWKLKENTDENFKKE 484

Query: 843  YPDVVEKQEEVWAELERMVMKSFDDGKSVH---GAKNTSMTSRPG------RPSNSDKGI 691
            YPD+V+KQE++W        K+ +D  + H   GAK     ++PG      +  NSDK  
Sbjct: 485  YPDIVKKQEQIW--------KAGEDNVTNHIWRGAKGGPSRTKPGTVIKSEKAGNSDKVA 536

Query: 690  TKTVTVVPSGKTIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDA 511
             K      +G+T+ D+ REA+  K L KV Q YKVCS QLI +GLRDLAL++S LPK DA
Sbjct: 537  RKVAPGAHAGRTMSDETREAIP-KALKKVFQTYKVCSLQLIRKGLRDLALSQSTLPKADA 595

Query: 510  RIVKAAEYGTDCPD-ELRKLVDQVAVNIH-GVYVAKSSSDHLQYDPLRNVVIDLLRQNGP 337
            R+V  A YG D P+ EL+ +V QVAV +H G++V KSS ++ + DPLR VVI+LLR    
Sbjct: 596  RLVVKAAYGADAPEHELQDVVSQVAVELHGGLFVMKSSQENPECDPLREVVINLLRVKD- 654

Query: 336  NAKLKKAEVFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDGR 190
              KLKKAEV  AA+ +LKR+++++EY+K+M++FC +KG+ W LKSGDG+
Sbjct: 655  --KLKKAEVTAAAQVSLKRDITNNEYNKVMSDFCEYKGNWWVLKSGDGK 701


>ref|XP_012491680.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
            [Gossypium raimondii] gi|763776417|gb|KJB43540.1|
            hypothetical protein B456_007G205200 [Gossypium
            raimondii]
          Length = 685

 Score =  337 bits (863), Expect = 2e-89
 Identities = 193/409 (47%), Positives = 269/409 (65%), Gaps = 13/409 (3%)
 Frame = -1

Query: 1377 RYLERMVAQERAPLQFTLNPYDYIDSLCPGSNNNDVRSKGXXXXXXXXXXXXXRMQKLLS 1198
            +YL++M+A++ +P++FTLNPYDY+DSLCP  +NN+ +++              R++KLL+
Sbjct: 292  QYLQKMMAEQSSPIEFTLNPYDYVDSLCPLPSNNN-KAQRLSRRLLCSIPLEDRLKKLLT 350

Query: 1197 EGAAVHKFNALK-HFAPDCTAEAILDVLQRNAILVQGLWALKSRLLFPLPTKENFMQRAA 1021
            EG   H FN LK H+APD   E + +VLQ++A+LVQGLW  KS LLFP    ++     A
Sbjct: 351  EGRPFHHFNTLKRHYAPDDPIEEVFEVLQKHALLVQGLWVPKSSLLFPGDPSKSL----A 406

Query: 1020 RDYVLLLFKKSPVISFSLLK-VPPSLKNFVNKFLNIFATERPSVKDWKFKEPTDQSFIKL 844
            RDYVLLLF K+P IS+  +  +  S K  V  FL I A E P +K WK KE TD++F K 
Sbjct: 407  RDYVLLLFSKNPFISYDKVNNLSTSRKEEVKGFLKILAIESPPLKGWKLKENTDENFKKE 466

Query: 843  YPDVVEKQEEVWAELERMVMKSFDDGKSVH---GAKNTSMTSRPG------RPSNSDKGI 691
            YPD+V+KQE++W        K+ +D  + H   GAK     ++PG      +  NSDK  
Sbjct: 467  YPDIVKKQEQIW--------KAGEDNVTNHIWRGAKGGPSRTKPGTVIKSEKAGNSDKVA 518

Query: 690  TKTVTVVPSGKTIPDDIREALSTKVLPKVIQDYKVCSFQLICQGLRDLALTKSNLPKVDA 511
             K      +G+T+ D+ REA+  K L KV Q YKVCS QLI +GLRDLAL++S LPK DA
Sbjct: 519  RKVAPGAHAGRTMSDETREAIP-KALKKVFQTYKVCSLQLIRKGLRDLALSQSTLPKADA 577

Query: 510  RIVKAAEYGTDCPD-ELRKLVDQVAVNIH-GVYVAKSSSDHLQYDPLRNVVIDLLRQNGP 337
            R+V  A YG D P+ EL+ +V QVAV +H G++V KSS ++ + DPLR VVI+LLR    
Sbjct: 578  RLVVKAAYGADAPEHELQDVVSQVAVELHGGLFVMKSSQENPECDPLREVVINLLRVKD- 636

Query: 336  NAKLKKAEVFDAARKALKREVSSSEYSKIMNEFCVFKGSLWTLKSGDGR 190
              KLKKAEV  AA+ +LKR+++++EY+K+M++FC +KG+ W LKSGDG+
Sbjct: 637  --KLKKAEVTAAAQVSLKRDITNNEYNKVMSDFCEYKGNWWVLKSGDGK 683