BLASTX nr result
ID: Zingiber25_contig00047798
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00047798
(358 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002458187.1| hypothetical protein SORBIDRAFT_03g028380 [S... 66 4e-09
ref|XP_004143823.1| PREDICTED: polygalacturonase-like [Cucumis s... 64 2e-08
ref|XP_003547585.1| PREDICTED: polygalacturonase-like [Glycine max] 64 3e-08
ref|XP_006493145.1| PREDICTED: polygalacturonase-like [Citrus si... 62 8e-08
ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote... 62 1e-07
ref|XP_002529090.1| Polygalacturonase precursor, putative [Ricin... 60 2e-07
ref|XP_006493154.1| PREDICTED: polygalacturonase-like [Citrus si... 59 5e-07
ref|XP_006304501.1| hypothetical protein CARUB_v10011292mg [Caps... 59 7e-07
dbj|BAG95892.1| unnamed protein product [Oryza sativa Japonica G... 58 1e-06
dbj|BAB21092.1| polygalacturonase precursor-like [Oryza sativa J... 58 1e-06
ref|NP_001043617.2| Os01g0623600 [Oryza sativa Japonica Group] g... 58 1e-06
ref|XP_002529091.1| Polygalacturonase precursor, putative [Ricin... 58 1e-06
ref|XP_006495385.1| PREDICTED: polygalacturonase-like, partial [... 57 3e-06
ref|XP_006493150.1| PREDICTED: putative disease resistance prote... 57 3e-06
ref|XP_006493148.1| PREDICTED: polygalacturonase-like [Citrus si... 57 3e-06
gb|EMJ05562.1| hypothetical protein PRUPE_ppa007271mg [Prunus pe... 57 3e-06
ref|NP_181917.1| putative polygalacturonase /pectinase [Arabidop... 57 3e-06
ref|XP_006493141.1| PREDICTED: polygalacturonase-like [Citrus si... 57 3e-06
ref|XP_006397562.1| hypothetical protein EUTSA_v10001486mg [Eutr... 57 3e-06
ref|XP_002880074.1| hypothetical protein ARALYDRAFT_903793 [Arab... 57 3e-06
>ref|XP_002458187.1| hypothetical protein SORBIDRAFT_03g028380 [Sorghum bicolor]
gi|241930162|gb|EES03307.1| hypothetical protein
SORBIDRAFT_03g028380 [Sorghum bicolor]
Length = 404
Score = 66.2 bits (160), Expect = 4e-09
Identities = 41/108 (37%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +2
Query: 44 MAKLTNFSPLFLLLFLCARSSAA--GNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXX 214
MA+ +S + LLL+ S AA YNV F F
Sbjct: 1 MARSNAYSLVLLLLYCYVSSGAAEAAAYNVAGFGAKPGGRTDSSGAFASAWSAACRSQEP 60
Query: 215 XTIYVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEYTGSSGASG 358
T+YVP G+FL+S+A F GPC S + +DGTLVAPS YT G+SG
Sbjct: 61 ATVYVPNGHFLLSRAAFTGPCSSSRVTLQVDGTLVAPSGYTSRGGSSG 108
>ref|XP_004143823.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
gi|449525056|ref|XP_004169536.1| PREDICTED:
polygalacturonase-like [Cucumis sativus]
Length = 392
Score = 63.9 bits (154), Expect = 2e-08
Identities = 42/100 (42%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +2
Query: 44 MAKLTNFSPLF--LLLFLCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXX 214
MA FS F LL+ L ++S+AGNYNV++F FLK
Sbjct: 1 MANFPFFSIHFCLLLITLFFQASSAGNYNVISFGAKGDERTDSTVSFLKAWASACTSPKP 60
Query: 215 XTIYVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEY 334
TIYVP G FL+ F GPC++ I F IDGT+VAPS+Y
Sbjct: 61 STIYVPKGRFLIKGIVFKGPCKN-QITFQIDGTVVAPSDY 99
>ref|XP_003547585.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 412
Score = 63.5 bits (153), Expect = 3e-08
Identities = 46/110 (41%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Frame = +2
Query: 44 MAKLTNFSPLFLL----LFLCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXX 208
MA TN L L F S A + NVL+F FLK
Sbjct: 1 MAHYTNHLMLLFLATISFFSSTFSKDASSINVLSFGAKPNGKFDSTTSFLKAWSNACKSK 60
Query: 209 XXXTIYVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEYTGSSGASG 358
T YVP GNFL+ Q F+GPC S +IKF IDGT+VAPS+Y S G SG
Sbjct: 61 ESATFYVPKGNFLIKQVTFEGPC-SNNIKFRIDGTIVAPSDYR-SHGNSG 108
>ref|XP_006493145.1| PREDICTED: polygalacturonase-like [Citrus sinensis]
Length = 387
Score = 62.0 bits (149), Expect = 8e-08
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Frame = +2
Query: 71 LFLLLFLCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXXXTIYVPTGNFL 247
LF+++F+ +SS A NYNV+T+ FLK TIYVP G +L
Sbjct: 10 LFVIIFI--KSSNAANYNVITYGAKPDGRTDSTKPFLKAWASACRSAKASTIYVPKGRYL 67
Query: 248 VSQARFDGPCRSPSIKFSIDGTLVAPSEY--TGSSG 349
+ A F GPCR+ + IDGT+VAP+ Y G+SG
Sbjct: 68 IKAAEFRGPCRN-RVTLQIDGTIVAPTNYWALGNSG 102
>ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
sativus]
Length = 908
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +2
Query: 65 SPLFLLLF-LCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXXXTIYVPTG 238
S +F+L F L + S+AGNYNV+TF FLK TI VP G
Sbjct: 7 SLVFVLFFHLFIQISSAGNYNVITFGAKPDGKTDSTQSFLKAWMSACSSLTRSTINVPKG 66
Query: 239 NFLVSQARFDGPCRSPSIKFSIDGTLVAPSEY 334
FL++ F GPC++ +I F ++GTLVAP +Y
Sbjct: 67 RFLLTSITFRGPCKNSNITFQLNGTLVAPLDY 98
>ref|XP_002529090.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531441|gb|EEF33274.1| Polygalacturonase precursor,
putative [Ricinus communis]
Length = 393
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +2
Query: 59 NFSPLFLLLFLCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXXXTIYVPT 235
+F L +LLF + ++AA YNVL++ FL TIYVP+
Sbjct: 10 SFLALLILLFTSSLATAA-QYNVLSYGAKPDGRTDSTKAFLAAWTQACGSTKPPTIYVPS 68
Query: 236 GNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEY 334
G F + F GPC++ +I F IDGTLVAPS+Y
Sbjct: 69 GKFFLKDLSFGGPCKNNAILFRIDGTLVAPSDY 101
>ref|XP_006493154.1| PREDICTED: polygalacturonase-like [Citrus sinensis]
Length = 397
Score = 59.3 bits (142), Expect = 5e-07
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +2
Query: 44 MAKLTNFSPLFLLLFLCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXXXT 220
M+ NF P L+LF + + +YNVL+F FL T
Sbjct: 5 MSLSINFLPFLLILFFSSSLAIPLSYNVLSFGARPDGQTDSVKSFLAAWAQACGSAEAAT 64
Query: 221 IYVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEY 334
IYVP G +L+S F G C++ I IDGTLVAP++Y
Sbjct: 65 IYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADY 102
>ref|XP_006304501.1| hypothetical protein CARUB_v10011292mg [Capsella rubella]
gi|482573212|gb|EOA37399.1| hypothetical protein
CARUB_v10011292mg [Capsella rubella]
Length = 394
Score = 58.9 bits (141), Expect = 7e-07
Identities = 42/107 (39%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Frame = +2
Query: 44 MAKLTNFSPLF--LLLFLCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXX 214
MAK PL LL F+ SSA+ +NV+TF FLK
Sbjct: 1 MAKSAITLPLLFILLTFIDVSSSASMVFNVVTFGAKPDGVTDSTAAFLKAWQGACGSVAS 60
Query: 215 XTIYVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEYT--GSSG 349
T+ VPTG FL+ F GPC+S +KF + GT+VAP++Y GSSG
Sbjct: 61 ATVVVPTGTFLLKPITFGGPCKS-KLKFQVTGTVVAPTDYRSFGSSG 106
>dbj|BAG95892.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 418
Score = 58.2 bits (139), Expect = 1e-06
Identities = 41/113 (36%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Frame = +2
Query: 35 FNLMAKLTNFSPLFLLLFLCARSSAAGN----YNVLTFXXXXXXXXXXXXFL-KXXXXXX 199
F+ MA+ + S + LLL C SAA YNV ++ L
Sbjct: 16 FSRMARCS-VSRVVLLLLCCMHLSAAAAGAAVYNVESYDARPDGRTDASRALASAWSAAC 74
Query: 200 XXXXXXTIYVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEYTGSSGASG 358
T+YVP G F VS + F GPC + IDGTLVAPS YTGS+ + G
Sbjct: 75 RSPEPATVYVPDGEFFVSHSAFAGPCSGGRMTVQIDGTLVAPSGYTGSASSGG 127
>dbj|BAB21092.1| polygalacturonase precursor-like [Oryza sativa Japonica Group]
gi|125571226|gb|EAZ12741.1| hypothetical protein
OsJ_02658 [Oryza sativa Japonica Group]
Length = 400
Score = 57.8 bits (138), Expect = 1e-06
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = +2
Query: 218 TIYVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEYTGSSGASG 358
T+YVP G F VS + F GPC + IDGTLVAPS YTGS+ + G
Sbjct: 63 TVYVPDGEFFVSHSAFAGPCSGGRMTVQIDGTLVAPSGYTGSASSGG 109
>ref|NP_001043617.2| Os01g0623600 [Oryza sativa Japonica Group]
gi|255673476|dbj|BAF05531.2| Os01g0623600 [Oryza sativa
Japonica Group]
Length = 168
Score = 57.8 bits (138), Expect = 1e-06
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = +2
Query: 218 TIYVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEYTGSSGASG 358
T+YVP G F VS + F GPC + IDGTLVAPS YTGS+ + G
Sbjct: 63 TVYVPDGEFFVSHSAFAGPCSGGRMTVQIDGTLVAPSGYTGSASSGG 109
>ref|XP_002529091.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531442|gb|EEF33275.1| Polygalacturonase precursor,
putative [Ricinus communis]
Length = 392
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +2
Query: 71 LFLLLFLCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXXXTIYVPTGNFL 247
+ L+ F + A+ YNVL F FL TIYVP G F
Sbjct: 12 VLLVSFTSYSAMASVQYNVLNFGAKPDGKTDSAKAFLAAWTQACASTKSSTIYVPNGRFF 71
Query: 248 VSQARFDGPCRSPSIKFSIDGTLVAPSEY 334
+S+ F GPC++ +I FSI GTLVAPS+Y
Sbjct: 72 LSKIAFQGPCKNNAIGFSIGGTLVAPSDY 100
>ref|XP_006495385.1| PREDICTED: polygalacturonase-like, partial [Citrus sinensis]
Length = 316
Score = 57.0 bits (136), Expect = 3e-06
Identities = 39/105 (37%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Frame = +2
Query: 44 MAKLTNFSPLFLLLFLCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXXXT 220
MAKL LF+ SA+ YNV+ F FL+ T
Sbjct: 1 MAKLAVSCTLFIFFINTLFQSASAAYNVINFGAKPDGKSDATQAFLRAWSSACYSNSPAT 60
Query: 221 IYVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEY--TGSSG 349
++VP G FLV F+GPCR I F IDGT++APS Y G+SG
Sbjct: 61 LHVPRGLFLVKSISFNGPCRH-RIVFQIDGTIIAPSSYWSLGNSG 104
>ref|XP_006493150.1| PREDICTED: putative disease resistance protein RGA3-like [Citrus
sinensis]
Length = 1039
Score = 57.0 bits (136), Expect = 3e-06
Identities = 39/105 (37%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Frame = +2
Query: 44 MAKLTNFSPLFLLLFLCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXXXT 220
MAKL LF+ SA+ YNV+ F FL+ T
Sbjct: 1 MAKLAVSCTLFIFFINTLFQSASAAYNVINFGAKPDGKSDATQAFLRAWSSACYSNSPAT 60
Query: 221 IYVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEY--TGSSG 349
++VP G FLV F+GPCR I F IDGT++APS Y G+SG
Sbjct: 61 LHVPRGLFLVKSISFNGPCRH-RIVFQIDGTIIAPSSYWSLGNSG 104
>ref|XP_006493148.1| PREDICTED: polygalacturonase-like [Citrus sinensis]
Length = 393
Score = 57.0 bits (136), Expect = 3e-06
Identities = 39/105 (37%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Frame = +2
Query: 44 MAKLTNFSPLFLLLFLCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXXXT 220
MAKL LF+ SA+ YNV+ F FL+ T
Sbjct: 1 MAKLAVSCTLFIFFINTLFQSASAAYNVINFGAKPDGKSDATQAFLRAWSSACYSNSPAT 60
Query: 221 IYVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEY--TGSSG 349
++VP G FLV F+GPCR I F IDGT++APS Y G+SG
Sbjct: 61 LHVPRGLFLVKSISFNGPCRH-RIVFQIDGTIIAPSSYWSLGNSG 104
>gb|EMJ05562.1| hypothetical protein PRUPE_ppa007271mg [Prunus persica]
Length = 375
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 221 IYVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEY 334
IYVP G FLV A F GPC++ +I F IDGTLVAPS+Y
Sbjct: 46 IYVPAGRFLVQNAAFSGPCKNNAITFRIDGTLVAPSDY 83
>ref|NP_181917.1| putative polygalacturonase /pectinase [Arabidopsis thaliana]
gi|3212847|gb|AAC23398.1| putative polygalacturonase
[Arabidopsis thaliana] gi|67633606|gb|AAY78727.1|
putative polygalacturonase/pectinase [Arabidopsis
thaliana] gi|330255247|gb|AEC10341.1| putative
polygalacturonase /pectinase [Arabidopsis thaliana]
Length = 392
Score = 57.0 bits (136), Expect = 3e-06
Identities = 40/101 (39%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +2
Query: 41 LMAKLTNFSPLFLLLFLCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXXX 217
L+A L F FLL+ S+AA NYNV++F FL
Sbjct: 6 LVAVLLMFFSSFLLM---KSSTAASNYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAAAV 62
Query: 218 TIYVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEYTG 340
T+ VP G+FL+ F GPCRS I F I GT+VAPS+Y G
Sbjct: 63 TVTVPRGSFLLKPVEFRGPCRS-RITFQIYGTIVAPSDYRG 102
>ref|XP_006493141.1| PREDICTED: polygalacturonase-like [Citrus sinensis]
Length = 397
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +2
Query: 62 FSPLFLLLFLCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXXXTIYVPTG 238
F P L+LF + + +YNVL+F FL TIYVP G
Sbjct: 11 FLPFLLILFFSSSLAIPLSYNVLSFGARPDGQTDSVKSFLAAWAQACGSAEAATIYVPPG 70
Query: 239 NFLVSQARFDGPCRSPSIKFSIDGTLVAPSEY 334
+L+S F G C++ I IDGTLVAP++Y
Sbjct: 71 RYLLSNVVFQGQCKNNDITIRIDGTLVAPADY 102
>ref|XP_006397562.1| hypothetical protein EUTSA_v10001486mg [Eutrema salsugineum]
gi|557098635|gb|ESQ39015.1| hypothetical protein
EUTSA_v10001486mg [Eutrema salsugineum]
Length = 392
Score = 56.6 bits (135), Expect = 3e-06
Identities = 40/99 (40%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +2
Query: 50 KLTNFSPLFLLLFLCARSS-AAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXXXTI 223
KL LF FL R+S AA NYNV+ F FL T+
Sbjct: 5 KLVAVLLLFFSSFLLVRTSMAASNYNVVRFGAKPDGRTDSTKAFLGAWQAACRSAASVTV 64
Query: 224 YVPTGNFLVSQARFDGPCRSPSIKFSIDGTLVAPSEYTG 340
VP G+FL+ +F GPCRS I F I GT+VAPS+Y G
Sbjct: 65 TVPRGSFLLKPVQFRGPCRS-RITFQIYGTIVAPSDYRG 102
>ref|XP_002880074.1| hypothetical protein ARALYDRAFT_903793 [Arabidopsis lyrata subsp.
lyrata] gi|297325913|gb|EFH56333.1| hypothetical protein
ARALYDRAFT_903793 [Arabidopsis lyrata subsp. lyrata]
Length = 387
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +2
Query: 77 LLLFLCARSSAAGNYNVLTFXXXXXXXXXXXX-FLKXXXXXXXXXXXXTIYVPTGNFLVS 253
L++ L S+AA NYNV++F FL T+ VP G+FL+
Sbjct: 10 LVILLMKSSTAANNYNVVSFGAKPDGRTDSTEAFLGAWQAACRSAAAVTVTVPRGSFLLK 69
Query: 254 QARFDGPCRSPSIKFSIDGTLVAPSEYTG 340
F GPCRS I F I GT+VAPS+Y G
Sbjct: 70 PVEFRGPCRS-RITFQIYGTIVAPSDYRG 97