BLASTX nr result
ID: Zingiber25_contig00047617
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00047617
(373 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003570061.1| PREDICTED: tRNA pseudouridine synthase A, mi... 148 6e-34
ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mi... 146 3e-33
gb|EMT13214.1| tRNA pseudouridine synthase A [Aegilops tauschii] 146 3e-33
gb|EMS53855.1| tRNA pseudouridine synthase A, mitochondrial [Tri... 146 3e-33
dbj|BAK04467.1| predicted protein [Hordeum vulgare subsp. vulgare] 146 3e-33
gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays] 144 2e-32
ref|XP_002454502.1| hypothetical protein SORBIDRAFT_04g032290 [S... 144 2e-32
gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tR... 144 2e-32
ref|NP_001150144.1| LOC100283773 [Zea mays] gi|195637102|gb|ACG3... 144 2e-32
ref|XP_006647660.1| PREDICTED: tRNA pseudouridine synthase A, mi... 142 6e-32
ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group] g... 140 2e-31
gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indi... 140 2e-31
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi... 139 3e-31
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum... 139 3e-31
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu... 137 1e-30
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou... 137 1e-30
ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Popu... 137 1e-30
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi... 137 2e-30
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi... 137 2e-30
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca... 137 2e-30
>ref|XP_003570061.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Brachypodium distachyon]
Length = 553
Score = 148 bits (374), Expect = 6e-34
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +2
Query: 122 PGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRR 301
PG+PRRRYKRRKVAI L YCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR RR
Sbjct: 38 PGQPRRRYKRRKVAILLAYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPRR 97
Query: 302 YDWARSARTDKGVSAAAQVVSGRF 373
Y+WAR+ARTDKGVSAAAQVVSGRF
Sbjct: 98 YEWARAARTDKGVSAAAQVVSGRF 121
>ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Setaria italica]
Length = 538
Score = 146 bits (368), Expect = 3e-33
Identities = 73/84 (86%), Positives = 76/84 (90%), Gaps = 1/84 (1%)
Frame = +2
Query: 125 GEPRR-RYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRR 301
GEPRR RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR RR
Sbjct: 37 GEPRRPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPRR 96
Query: 302 YDWARSARTDKGVSAAAQVVSGRF 373
YDWAR+ARTDKGVSAAAQVVSGRF
Sbjct: 97 YDWARAARTDKGVSAAAQVVSGRF 120
>gb|EMT13214.1| tRNA pseudouridine synthase A [Aegilops tauschii]
Length = 585
Score = 146 bits (368), Expect = 3e-33
Identities = 70/84 (83%), Positives = 75/84 (89%)
Frame = +2
Query: 122 PGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRR 301
PG+PRRRYKRRKVAI L YCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR R
Sbjct: 38 PGQPRRRYKRRKVAIILAYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPAR 97
Query: 302 YDWARSARTDKGVSAAAQVVSGRF 373
Y+WAR+ARTDKGVSAAAQVVSGRF
Sbjct: 98 YEWARAARTDKGVSAAAQVVSGRF 121
>gb|EMS53855.1| tRNA pseudouridine synthase A, mitochondrial [Triticum urartu]
Length = 575
Score = 146 bits (368), Expect = 3e-33
Identities = 70/84 (83%), Positives = 75/84 (89%)
Frame = +2
Query: 122 PGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRR 301
PG+PRRRYKRRKVAI L YCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR R
Sbjct: 38 PGQPRRRYKRRKVAIILAYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPAR 97
Query: 302 YDWARSARTDKGVSAAAQVVSGRF 373
Y+WAR+ARTDKGVSAAAQVVSGRF
Sbjct: 98 YEWARAARTDKGVSAAAQVVSGRF 121
>dbj|BAK04467.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 572
Score = 146 bits (368), Expect = 3e-33
Identities = 70/84 (83%), Positives = 75/84 (89%)
Frame = +2
Query: 122 PGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRR 301
PG+PRRRYKRRKVAI L YCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR R
Sbjct: 38 PGQPRRRYKRRKVAIILAYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPAR 97
Query: 302 YDWARSARTDKGVSAAAQVVSGRF 373
Y+WAR+ARTDKGVSAAAQVVSGRF
Sbjct: 98 YEWARAARTDKGVSAAAQVVSGRF 121
>gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays]
Length = 565
Score = 144 bits (362), Expect = 2e-32
Identities = 70/84 (83%), Positives = 74/84 (88%)
Frame = +2
Query: 122 PGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRR 301
P + R RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR RR
Sbjct: 42 PAQRRPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRSAPRR 101
Query: 302 YDWARSARTDKGVSAAAQVVSGRF 373
YDWAR+ARTDKGVSAAAQVVSGRF
Sbjct: 102 YDWARAARTDKGVSAAAQVVSGRF 125
>ref|XP_002454502.1| hypothetical protein SORBIDRAFT_04g032290 [Sorghum bicolor]
gi|241934333|gb|EES07478.1| hypothetical protein
SORBIDRAFT_04g032290 [Sorghum bicolor]
Length = 567
Score = 144 bits (362), Expect = 2e-32
Identities = 70/84 (83%), Positives = 74/84 (88%)
Frame = +2
Query: 122 PGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRR 301
P + R RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR RR
Sbjct: 42 PAQRRPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPRR 101
Query: 302 YDWARSARTDKGVSAAAQVVSGRF 373
YDWAR+ARTDKGVSAAAQVVSGRF
Sbjct: 102 YDWARAARTDKGVSAAAQVVSGRF 125
>gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tRNA pseudouridine
synthase family protein [Zea mays]
Length = 562
Score = 144 bits (362), Expect = 2e-32
Identities = 70/84 (83%), Positives = 74/84 (88%)
Frame = +2
Query: 122 PGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRR 301
P + R RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR RR
Sbjct: 42 PAQRRPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRSAPRR 101
Query: 302 YDWARSARTDKGVSAAAQVVSGRF 373
YDWAR+ARTDKGVSAAAQVVSGRF
Sbjct: 102 YDWARAARTDKGVSAAAQVVSGRF 125
>ref|NP_001150144.1| LOC100283773 [Zea mays] gi|195637102|gb|ACG38019.1| tRNA
pseudouridine synthase family protein [Zea mays]
Length = 561
Score = 144 bits (362), Expect = 2e-32
Identities = 70/84 (83%), Positives = 74/84 (88%)
Frame = +2
Query: 122 PGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRR 301
P + R RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR RR
Sbjct: 42 PAQRRPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRSAPRR 101
Query: 302 YDWARSARTDKGVSAAAQVVSGRF 373
YDWAR+ARTDKGVSAAAQVVSGRF
Sbjct: 102 YDWARAARTDKGVSAAAQVVSGRF 125
>ref|XP_006647660.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Oryza
brachyantha]
Length = 569
Score = 142 bits (357), Expect = 6e-32
Identities = 71/84 (84%), Positives = 75/84 (89%), Gaps = 1/84 (1%)
Frame = +2
Query: 125 GEPRR-RYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRR 301
G+PR RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR RR
Sbjct: 38 GQPRAPRYKRRKVAIMLGYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRPAPRR 97
Query: 302 YDWARSARTDKGVSAAAQVVSGRF 373
YDWAR+ARTDKGVSAAAQVVSGRF
Sbjct: 98 YDWARAARTDKGVSAAAQVVSGRF 121
>ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group]
gi|50251324|dbj|BAD28300.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|50252138|dbj|BAD28134.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|113537217|dbj|BAF09600.1| Os02g0668400 [Oryza sativa
Japonica Group]
Length = 581
Score = 140 bits (353), Expect = 2e-31
Identities = 70/83 (84%), Positives = 74/83 (89%), Gaps = 1/83 (1%)
Frame = +2
Query: 128 EPRR-RYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRRY 304
+PR RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR RRY
Sbjct: 40 QPRAPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYRAGAVPEADRAAPRRY 99
Query: 305 DWARSARTDKGVSAAAQVVSGRF 373
DWAR+ARTDKGVSAAAQVVSGRF
Sbjct: 100 DWARAARTDKGVSAAAQVVSGRF 122
>gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indica Group]
Length = 581
Score = 140 bits (353), Expect = 2e-31
Identities = 70/83 (84%), Positives = 74/83 (89%), Gaps = 1/83 (1%)
Frame = +2
Query: 128 EPRR-RYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRRY 304
+PR RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR RRY
Sbjct: 40 QPRAPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYRAGAVPEADRAAPRRY 99
Query: 305 DWARSARTDKGVSAAAQVVSGRF 373
DWAR+ARTDKGVSAAAQVVSGRF
Sbjct: 100 DWARAARTDKGVSAAAQVVSGRF 122
>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Cucumis sativus]
Length = 519
Score = 139 bits (351), Expect = 3e-31
Identities = 66/80 (82%), Positives = 71/80 (88%)
Frame = +2
Query: 134 RRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRRYDWA 313
++RYKRRKVAIF YCG GYQGMQKNPGA+TIE DLEEAL+LA AVP DRGLS+RYDWA
Sbjct: 49 KQRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWA 108
Query: 314 RSARTDKGVSAAAQVVSGRF 373
RSARTDKGVSA QVVSGRF
Sbjct: 109 RSARTDKGVSAVGQVVSGRF 128
>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp.
melo]
Length = 519
Score = 139 bits (351), Expect = 3e-31
Identities = 66/80 (82%), Positives = 71/80 (88%)
Frame = +2
Query: 134 RRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRRYDWA 313
++RYKRRKVAIF YCG GYQGMQKNPGA+TIE DLEEAL+LA AVP DRGLS+RYDWA
Sbjct: 49 KQRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWA 108
Query: 314 RSARTDKGVSAAAQVVSGRF 373
RSARTDKGVSA QVVSGRF
Sbjct: 109 RSARTDKGVSAVGQVVSGRF 128
>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
gi|550339814|gb|EEE94755.2| hypothetical protein
POPTR_0005s26830g [Populus trichocarpa]
Length = 497
Score = 137 bits (346), Expect = 1e-30
Identities = 65/80 (81%), Positives = 71/80 (88%)
Frame = +2
Query: 134 RRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRRYDWA 313
++RYKRRK+AIFL YCG GYQGMQKNPGA+TIEGDLEEALF A AVP DRG+ +RYDWA
Sbjct: 48 KQRYKRRKIAIFLTYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEHDRGIPKRYDWA 107
Query: 314 RSARTDKGVSAAAQVVSGRF 373
RSARTDKGVSA QVVSGRF
Sbjct: 108 RSARTDKGVSAVGQVVSGRF 127
>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 137 bits (346), Expect = 1e-30
Identities = 65/80 (81%), Positives = 70/80 (87%)
Frame = +2
Query: 134 RRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRRYDWA 313
++RYKRRKVA F YCG GYQGMQKNPGA+TIE DLEEAL+LA AVP DRGLS+RYDWA
Sbjct: 49 KQRYKRRKVAXFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWA 108
Query: 314 RSARTDKGVSAAAQVVSGRF 373
RSARTDKGVSA QVVSGRF
Sbjct: 109 RSARTDKGVSAVGQVVSGRF 128
>ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Populus trichocarpa]
gi|550344062|gb|EEE79946.2| hypothetical protein
POPTR_0002s01580g [Populus trichocarpa]
Length = 516
Score = 137 bits (345), Expect = 1e-30
Identities = 64/80 (80%), Positives = 70/80 (87%)
Frame = +2
Query: 134 RRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRRYDWA 313
++RYKRRK+AIF YCG GYQGMQKNPGA+TIEGDLEEALF A AVP DRG+ +RYDWA
Sbjct: 48 KQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEQDRGIPKRYDWA 107
Query: 314 RSARTDKGVSAAAQVVSGRF 373
RSARTDKGVSA QVVSGRF
Sbjct: 108 RSARTDKGVSAVGQVVSGRF 127
>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
isoform X2 [Glycine max]
Length = 518
Score = 137 bits (344), Expect = 2e-30
Identities = 63/80 (78%), Positives = 71/80 (88%)
Frame = +2
Query: 134 RRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRRYDWA 313
++RYKRRKVAIF YCG GYQGMQKNPGA+TIEGDLEEAL+++ AVP DRG+ +RYDWA
Sbjct: 14 KKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWA 73
Query: 314 RSARTDKGVSAAAQVVSGRF 373
RSARTDKGVSA QVVSGRF
Sbjct: 74 RSARTDKGVSAVGQVVSGRF 93
>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
isoform X1 [Glycine max]
Length = 548
Score = 137 bits (344), Expect = 2e-30
Identities = 63/80 (78%), Positives = 71/80 (88%)
Frame = +2
Query: 134 RRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRRYDWA 313
++RYKRRKVAIF YCG GYQGMQKNPGA+TIEGDLEEAL+++ AVP DRG+ +RYDWA
Sbjct: 44 KKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWA 103
Query: 314 RSARTDKGVSAAAQVVSGRF 373
RSARTDKGVSA QVVSGRF
Sbjct: 104 RSARTDKGVSAVGQVVSGRF 123
>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
[Medicago truncatula] gi|388510220|gb|AFK43176.1|
unknown [Medicago truncatula]
Length = 530
Score = 137 bits (344), Expect = 2e-30
Identities = 64/78 (82%), Positives = 70/78 (89%)
Frame = +2
Query: 140 RYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRRYDWARS 319
RYKRRKVAIF YCG GYQGMQKNPGA+TIEG+LEEAL+++ AVP DRGLS+RYDWARS
Sbjct: 50 RYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARS 109
Query: 320 ARTDKGVSAAAQVVSGRF 373
ARTDKGVSA QVVSGRF
Sbjct: 110 ARTDKGVSAVGQVVSGRF 127