BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00047337
         (352 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY03681.1| Pentatricopeptide repeat superfamily protein, put...   111   9e-23
ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
gb|ESW09787.1| hypothetical protein PHAVU_009G155900g [Phaseolus...   107   2e-21
ref|XP_006581772.1| PREDICTED: pentatricopeptide repeat-containi...   106   4e-21
ref|XP_004305694.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_004502948.1| PREDICTED: pentatricopeptide repeat-containi...   102   7e-20
ref|XP_003602633.1| Pentatricopeptide repeat-containing protein ...    99   6e-19
ref|XP_006648732.1| PREDICTED: pentatricopeptide repeat-containi...    99   7e-19
gb|ACN28508.1| unknown [Zea mays] gi|413937254|gb|AFW71805.1| hy...    99   7e-19
ref|NP_001168520.1| uncharacterized protein LOC100382300 [Zea ma...    99   7e-19
gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japo...    97   2e-18
ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group] g...    97   2e-18
gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indi...    96   4e-18
dbj|BAK07383.1| predicted protein [Hordeum vulgare subsp. vulgare]     96   5e-18
ref|XP_004236484.1| PREDICTED: pentatricopeptide repeat-containi...    95   8e-18
ref|XP_006347656.1| PREDICTED: pentatricopeptide repeat-containi...    93   4e-17
ref|XP_006837084.1| hypothetical protein AMTR_s00110p00099550 [A...    93   4e-17
ref|XP_002531058.1| pentatricopeptide repeat-containing protein,...    93   4e-17
ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containi...    92   5e-17

>gb|EOY03681.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 577

 Score =  111 bits (278), Expect = 9e-23
 Identities = 53/116 (45%), Positives = 84/116 (72%), Gaps = 2/116 (1%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKH--FVVMDEFTVVS 177
           G  D A  LFD++P+++LVSYN++I   ++ GF ++++++F++ML     +V+D +TVVS
Sbjct: 87  GHFDRARNLFDQMPNRNLVSYNSLISGFSQHGFFKESVNIFKKMLNECDHLVIDRYTVVS 146

Query: 176 VCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           V  AC  LG LK L Q+H  +IV GLE +LI+ N +ID+YGKCG+V+S+  +F +M
Sbjct: 147 VVGACVCLGALKLLCQVHGFMIVFGLELDLIVYNALIDAYGKCGEVNSAYRIFCRM 202



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 37/113 (32%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
 Frame = -3

Query: 347 RIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCA 168
           R++ A ++F+ +P ++ VS+  +I   A+ G   +AL+LF +ML+  V  + +T V V +
Sbjct: 222 RLEDASRVFNEMPVKNTVSWTGLITGFAQNGRGNEALNLFWQMLEERVQPNAYTYVCVLS 281

Query: 167 ACTGLGFLKSLRQLHASVI-VSGL--EFNLIMSNVMIDSYGKCGDVDSSQHVF 18
           AC  L  ++  +Q+H  ++ VS      N  + N +ID Y KCGD++S++ +F
Sbjct: 282 ACADLARIEIGKQIHGHIVRVSSRCDSLNEFVFNALIDMYCKCGDMNSAKLLF 334


>ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
           gi|449526377|ref|XP_004170190.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 577

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/117 (42%), Positives = 80/117 (68%), Gaps = 2/117 (1%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHF--VVMDEFTVVS 177
           G    A ++FD +P  ++VSYNT+I S    G + +++++FR+M + F  + +DE T+VS
Sbjct: 91  GFFSQARKVFDEMPHPNIVSYNTLISSFTHHGLYVESMNIFRQMQQDFDLLALDEITLVS 150

Query: 176 VCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQME 6
           +   C  LG L+ LRQ+H + IV GLEFN+I+ N ++D+YGKCGD D+S  +F +M+
Sbjct: 151 IAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNAIVDAYGKCGDPDASYSIFSRMK 207



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/114 (30%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
 Frame = -3

Query: 347 RIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCA 168
           R+D A ++F  +P +++ ++  +I +L +  +  +ALDLF++ML+     + FT V V +
Sbjct: 226 RLDDAFRVFSCMPVKNVHTWTALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLS 285

Query: 167 ACTGLGFLKSLRQLHASVIVSGLEF---NLIMSNVMIDSYGKCGDVDSSQHVFD 15
           AC  L  +   +++H  +I    E    N+ + N +ID Y K GDV S++ +F+
Sbjct: 286 ACADLALIAKGKEIHGLIIRRSSELNFPNVYVCNALIDLYSKSGDVKSARMLFN 339


>ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 580

 Score =  107 bits (267), Expect = 2e-21
 Identities = 51/116 (43%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHF--VVMDEFTVVS 177
           G  + AH L D++P  +LVSYN++I  L   GF +++L++F+ MLK    V+ DEFT+VS
Sbjct: 94  GLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVS 153

Query: 176 VCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           +  +C  LG  + LRQ+H + I+ GL  N+I+ N +ID+YGKCG+ D S  +F +M
Sbjct: 154 LVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFSRM 209



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
 Frame = -3

Query: 347 RIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCA 168
           R++ AH LF ++ +++ VS+  +I   A+ G   +AL LF +M +  +    FT  SV +
Sbjct: 229 RLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLS 288

Query: 167 ACTGLGFLKSLRQLHASVIVSG-LEF--NLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           AC  L  +   +++H  +I S  +++  N+ + N +ID Y KCG + S+  +F  M
Sbjct: 289 ACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGM 344


>gb|ESW09787.1| hypothetical protein PHAVU_009G155900g [Phaseolus vulgaris]
          Length = 582

 Score =  107 bits (266), Expect = 2e-21
 Identities = 52/113 (46%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRML--KHFVVMDEFTVVS 177
           G  D AH LFD++P +++VSYN++I    R   H  ++ LFR M   ++ +V+DEFTVVS
Sbjct: 90  GLFDKAHNLFDKMPQRNVVSYNSLISGFTRYDRHEDSIKLFRVMQNGRNVLVLDEFTVVS 149

Query: 176 VCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVF 18
           V  +C  LG  K L Q+H   ++ G+E+NLI++N +ID+YGKCG+ D S  VF
Sbjct: 150 VVGSCACLGNAKWLHQVHGVAVIVGMEWNLILNNALIDAYGKCGEPDLSCSVF 202



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
 Frame = -3

Query: 347 RIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCA 168
           R+D A ++F  +P ++ VS+  +I   AR G   +A D+F+ ML+  V     T VS+  
Sbjct: 225 RLDDACEVFKDMPVKNTVSWTALITGFARNGRFGEAFDVFKEMLEEGVRPSAPTFVSIID 284

Query: 167 ACTGLGFLKSLRQLHASVI---VSGLEFNLIMSNVMIDSYGKCGDVDSSQHVF 18
           AC     +   +Q+H  +I   +SG  FN+ + N +ID YGKCGD+ S++++F
Sbjct: 285 ACAEEALIGRGKQVHGKIIRGGISGNLFNVYVCNALIDMYGKCGDMKSAENLF 337


>ref|XP_006581772.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Glycine max]
          Length = 581

 Score =  106 bits (264), Expect = 4e-21
 Identities = 52/116 (44%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHF--VVMDEFTVVS 177
           G  D AH LFD++P +++VSYN++I    R G H  ++ LFR M      +V+DEFT+VS
Sbjct: 90  GFFDEAHNLFDKMPQRNVVSYNSLISGFTRHGLHEDSVKLFRVMQNSGKGLVLDEFTLVS 149

Query: 176 VCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           V  +C  LG L+ LRQ+H   ++ G+E+N+I++N +ID+YGKCG+ + S  VF  M
Sbjct: 150 VVGSCACLGNLQWLRQVHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSFSVFCYM 205



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/114 (33%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
 Frame = -3

Query: 347 RIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCA 168
           R+D A ++F  +P ++ VS+  ++    R G   +A D+F++ML+  V     T VSV  
Sbjct: 225 RLDEACRVFKDMPVKNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVSVID 284

Query: 167 ACTGLGFLKSLRQLHASVI---VSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFD 15
           AC     +   +Q+H  +I    SG  FN+ + N +ID Y KCGD+ S++++F+
Sbjct: 285 ACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFE 338


>ref|XP_004305694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Fragaria vesca subsp. vesca]
          Length = 589

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/116 (43%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLK--HFVVMDEFTVVS 177
           G  D A  L   + + +LVSYNT+I  LAR G+H++++ LF+RM +    +++D+FT VS
Sbjct: 103 GSFDDARHLLATMTEPNLVSYNTLISGLARHGYHKESIYLFQRMQQGCECLLLDQFTFVS 162

Query: 176 VCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           V   C  LG L  LRQ+H   I  GLE N++  N +++SYGKCG+ D+S  VF +M
Sbjct: 163 VVGTCASLGALAMLRQVHGVAIAIGLEMNIVACNSLVNSYGKCGEPDTSYSVFSRM 218



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
 Frame = -3

Query: 347 RIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCA 168
           R+D A  +F  +P ++ VS+  +I    + G    ALDLF++ML+  +     T VS+ +
Sbjct: 238 RMDDACWVFHGMPIKNTVSWTALISGFVQSGRGNDALDLFQKMLEERIPPSSVTYVSILS 297

Query: 167 ACTGLGFLKSLRQLHASVIVS--GLEF-NLIMSNVMIDSYGKCGDVDSSQHVF 18
           AC  L   +  +Q+H  +I S  G    NLI+ N ++D Y KCGD+ S + +F
Sbjct: 298 ACADLALNERGKQIHGHIIRSYNGCYLSNLIICNALVDMYSKCGDMRSGKTLF 350


>ref|XP_004502948.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cicer arietinum]
          Length = 599

 Score =  102 bits (253), Expect = 7e-20
 Identities = 48/116 (41%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHF--VVMDEFTVVS 177
           G    A++LFD++P ++LVSYN++I    R GFH++A++LF  M      +V+DEFT+VS
Sbjct: 106 GSFTHAYKLFDKMPQRNLVSYNSLISGFTRHGFHKEAVNLFHVMQNSCGGLVLDEFTLVS 165

Query: 176 VCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           +   C+ L  LK LR++H   ++ G   N+I++N +I++YGKCG+ D+S  +F  M
Sbjct: 166 IVRNCSCLCNLKMLREVHGVAVIVGFHSNVILNNALINAYGKCGETDASNCLFRSM 221



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
 Frame = -3

Query: 347 RIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCA 168
           RID A +LF  +P ++ VS+  +I   A+ G   +AL++F +ML+  V+    T VSV  
Sbjct: 241 RIDDACRLFHDMPVKNSVSWTALISGFAKNGRCYEALNVFHQMLEEKVMPSAQTFVSVLD 300

Query: 167 ACTGLGFLKSLRQLHASVI---VSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFD 15
           AC     +   +Q+H  +I    SG  FN+ + N +ID YGKCGD+ S++++FD
Sbjct: 301 ACASEALIGKGKQVHCQIIRGSNSGNLFNVYVCNALIDMYGKCGDMKSAENLFD 354


>ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491681|gb|AES72884.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 647

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 49/116 (42%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHF--VVMDEFTVVS 177
           G  + A++LFD +P ++LVSYN++I  L R  FH++A+  FR M      +++DEFT+VS
Sbjct: 158 GVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQNGVGGLMLDEFTLVS 217

Query: 176 VCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           + + C+ L  +K LRQ+H    + G   NLI++N +ID+YGKCG+ +SS  +F  M
Sbjct: 218 LVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRSM 273



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
 Frame = -3

Query: 347 RIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCA 168
           RID A ++F+ +P ++ VS+  +I    + G   +AL++F +M+K  V+    T VSV  
Sbjct: 293 RIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLD 352

Query: 167 ACTGLGFLKSLRQLHASVI---VSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           AC     +   +Q+H  +I    S   FN+ + N ++D Y KCGD+ S++++F+ M
Sbjct: 353 ACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMM 408


>ref|XP_006648732.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Oryza brachyantha]
          Length = 575

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 52/122 (42%), Positives = 80/122 (65%), Gaps = 8/122 (6%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPD--QHLVSYNTMILSLARQGFHRQALDLFRRMLK------HFVVMD 195
           G +  A  L D +P   +++VSYNT+I SLAR G   +AL +F R+++        V +D
Sbjct: 85  GSLPDALGLLDEMPPATRNVVSYNTVISSLARHGREAEALRVFARLVRDRSLGQQQVAID 144

Query: 194 EFTVVSVCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFD 15
            FTVVS  +AC GLG  + LR++H +V+VSG++  +IM+N ++D+Y K G V+ ++ VFD
Sbjct: 145 RFTVVSAASACAGLGDARPLREVHGAVVVSGMDVTVIMANAIVDAYSKAGRVEDARKVFD 204

Query: 14  QM 9
           QM
Sbjct: 205 QM 206



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
 Frame = -3

Query: 344 IDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCAA 165
           +D A Q+F+ +P+Q  +++  +I    + G    AL+LF RM+   VV   F +VS  + 
Sbjct: 227 LDEAVQVFEMMPEQDAIAWTALISGHEQNGEEELALELFERMVGEGVVPTPFALVSCLSV 286

Query: 164 CTGLGFLKSLRQLHASVI---VSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           C  LG +   +++H  ++   +    FN+ + N +ID Y KCG++ ++   FD+M
Sbjct: 287 CAKLGLVARGKEMHGFILRRCIGSNPFNIFIHNALIDMYSKCGNMVAAMATFDRM 341


>gb|ACN28508.1| unknown [Zea mays] gi|413937254|gb|AFW71805.1| hypothetical protein
           ZEAMMB73_337002 [Zea mays]
          Length = 608

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 50/116 (43%), Positives = 78/116 (67%), Gaps = 7/116 (6%)
 Frame = -3

Query: 335 AHQLFDRLP--DQHLVSYNTMILSLARQGFHRQALDLFRRMLKHF-----VVMDEFTVVS 177
           A +LFD +P   ++LVSYNT++ SLA  G   +AL +  R+ +       + MD FTVVS
Sbjct: 118 AFRLFDTMPADSRNLVSYNTLMSSLAHHGRQVEALRVVARLARDRFLGPGLAMDRFTVVS 177

Query: 176 VCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           V  AC G+G  + LR++H +V+VSG+EF +IM+N M+++Y K   V+ ++H+FDQ+
Sbjct: 178 VATACAGIGAARPLREMHGAVVVSGMEFTVIMANAMLNAYSKARRVEDARHLFDQV 233



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
 Frame = -3

Query: 335 AHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCAACTG 156
           A Q+FD +PD+  +++  +I    + G    AL+LF +ML   V    F +VS   AC  
Sbjct: 257 AVQVFDMMPDKDRIAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAK 316

Query: 155 LGFLKSLRQLHASVI---VSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           LG +   ++LH  ++   +  + FN+ + N ++D Y KCGD+ ++  VFD M
Sbjct: 317 LGLVTRGKELHCFILRRNIGSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWM 368


>ref|NP_001168520.1| uncharacterized protein LOC100382300 [Zea mays]
           gi|195615774|gb|ACG29717.1| pentatricopeptide repeat
           protein PPR868-14 [Zea mays] gi|223946951|gb|ACN27559.1|
           unknown [Zea mays]
          Length = 616

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 50/116 (43%), Positives = 78/116 (67%), Gaps = 7/116 (6%)
 Frame = -3

Query: 335 AHQLFDRLP--DQHLVSYNTMILSLARQGFHRQALDLFRRMLKHF-----VVMDEFTVVS 177
           A +LFD +P   ++LVSYNT++ SLA  G   +AL +  R+ +       + MD FTVVS
Sbjct: 126 AFRLFDTMPADSRNLVSYNTLMSSLAHHGRQVEALRVVARLARDRFLGPGLAMDRFTVVS 185

Query: 176 VCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           V  AC G+G  + LR++H +V+VSG+EF +IM+N M+++Y K   V+ ++H+FDQ+
Sbjct: 186 VATACAGIGAARPLREMHGAVVVSGMEFTVIMANAMLNAYSKARRVEDARHLFDQV 241



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
 Frame = -3

Query: 335 AHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCAACTG 156
           A Q+FD +PD+  +++  +I    + G    AL+LF +ML   V    F +VS   AC  
Sbjct: 265 AVQVFDMMPDKDRIAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAK 324

Query: 155 LGFLKSLRQLHASVI---VSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           LG +   ++LH  ++   +  + FN+ + N ++D Y KCGD+ ++  VFD M
Sbjct: 325 LGLVTRGKELHCFILRRNIGSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWM 376


>gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japonica Group]
          Length = 596

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 53/122 (43%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLP--DQHLVSYNTMILSLARQGFHRQALDLFRRMLK------HFVVMD 195
           G +  A +L D +P   +++VSYNT+I SLAR G   +AL +F ++ +        V +D
Sbjct: 110 GTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAID 169

Query: 194 EFTVVSVCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFD 15
            FTVVS  +AC GL   + LR+LH +V+VSG+E  +IM+N M+D+Y K G V+ ++ VFD
Sbjct: 170 RFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFD 229

Query: 14  QM 9
           QM
Sbjct: 230 QM 231



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
 Frame = -3

Query: 344 IDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCAA 165
           +D A Q+FD +P Q  +++  +I    + G    AL+LF RM    VV   F +VS   A
Sbjct: 252 LDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGA 311

Query: 164 CTGLGFLKSLRQLHASVI---VSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           C  +G +   +++H  ++   +    FN+ + N +ID Y KCGD+ ++  VFD+M
Sbjct: 312 CAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM 366


>ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group]
           gi|113536652|dbj|BAF09035.1| Os02g0555100 [Oryza sativa
           Japonica Group]
          Length = 596

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 53/122 (43%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLP--DQHLVSYNTMILSLARQGFHRQALDLFRRMLK------HFVVMD 195
           G +  A +L D +P   +++VSYNT+I SLAR G   +AL +F ++ +        V +D
Sbjct: 110 GTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAID 169

Query: 194 EFTVVSVCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFD 15
            FTVVS  +AC GL   + LR+LH +V+VSG+E  +IM+N M+D+Y K G V+ ++ VFD
Sbjct: 170 RFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFD 229

Query: 14  QM 9
           QM
Sbjct: 230 QM 231



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
 Frame = -3

Query: 344 IDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCAA 165
           +D A Q+FD +P Q  +++  +I    + G    AL+LF RM    VV   F +VS   A
Sbjct: 252 LDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGA 311

Query: 164 CTGLGFLKSLRQLHASVI---VSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           C  +G +   +++H  ++   +    FN+ + N +ID Y KCGD+ ++  VFD+M
Sbjct: 312 CAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM 366


>gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indica Group]
          Length = 596

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLP--DQHLVSYNTMILSLARQGFHRQALDLFRRMLK------HFVVMD 195
           G +  A +L D +P   +++VSYNT+I SLAR G   +AL +F ++ +        V +D
Sbjct: 110 GTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAID 169

Query: 194 EFTVVSVCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFD 15
            FTVVS  +AC GL   + LR+LH +V+VSG+E  +IM+N M+D+Y K G V+ ++ +FD
Sbjct: 170 RFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGLFD 229

Query: 14  QM 9
           QM
Sbjct: 230 QM 231



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
 Frame = -3

Query: 344 IDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCAA 165
           +D A Q+FD +P Q  +++  +I    + G    AL+LF RM    VV   F +VS   A
Sbjct: 252 LDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGA 311

Query: 164 CTGLGFLKSLRQLHASVI---VSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           C  +G +   +++H  ++   +    FN+ + N +ID Y KCGD+ ++  VFD+M
Sbjct: 312 CAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM 366


>dbj|BAK07383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 49/116 (42%), Positives = 78/116 (67%), Gaps = 7/116 (6%)
 Frame = -3

Query: 335 AHQLFDRLP--DQHLVSYNTMILSLARQGFHRQALDLFRRMLKHF-----VVMDEFTVVS 177
           A  L D +P   +++VSYNT+I +LAR G   +AL +F R+ +       V +D F VVS
Sbjct: 118 ALHLLDAMPASSRNVVSYNTIISALARNGRQGEALRVFARLARDRCLGPEVALDRFAVVS 177

Query: 176 VCAACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           V +AC G+G L+ LR++H +V+VSG+E  +IM+N M+D+Y K G ++ ++ +F+QM
Sbjct: 178 VASACAGMGALRPLREMHGAVVVSGVEVTVIMANAMVDAYSKAGRMEDARTLFNQM 233



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
 Frame = -3

Query: 347 RIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCA 168
           R+D A ++F  +P+Q  +++  +I    + G    ALDLF++ML   +    F +VS   
Sbjct: 253 RLDEAIRVFHMMPEQDTIAWTALISGHEQNGEEDAALDLFQQMLVEGMAPTPFALVSSLG 312

Query: 167 ACTGLGFLKSLRQLHASVIVS--GLE-FNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           AC  LG +   R++H  ++    GL+ FN+ + N +ID Y KCGD+ ++  VF +M
Sbjct: 313 ACAKLGLVTRGREVHGFILRRRIGLDPFNIFIHNALIDMYSKCGDMATAMLVFARM 368


>ref|XP_004236484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Solanum lycopersicum]
          Length = 591

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 45/114 (39%), Positives = 72/114 (63%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVC 171
           G+ D AHQLFD +PD+++V++N++I S       R+A+D+FR ML   V   E T+V V 
Sbjct: 168 GQPDDAHQLFDEIPDRNVVTWNSLITSYTHNRMFREAIDVFREMLASGVTPVEVTMVGVL 227

Query: 170 AACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           +AC+ LG L   + +H  ++ + L  N+ +   +ID Y KCGD+D ++ VF+ M
Sbjct: 228 SACSHLGALGQGKWIHDYIVKNRLRVNVYVGTALIDMYAKCGDIDEAKKVFETM 281



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVC 171
           G ID A ++F+ +  +++ ++N +I + A  G    AL  F RM++  +  D  T++ V 
Sbjct: 269 GDIDEAKKVFETMGLKNIYTWNVLISAYAMNGQGEAALRTFDRMIEKDLKPDHVTLLGVL 328

Query: 170 AACTGLGFLKSLRQLHASVIVS-GLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQME 6
            AC   GF++  R+L +S+I   GL+  ++    MID  G+ G +D +  +   M+
Sbjct: 329 CACCHQGFVEEGRRLFSSMINQFGLQPKIVHYGCMIDLLGRGGFLDEAMEIIHSMK 384


>ref|XP_006347656.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like isoform X1 [Solanum tuberosum]
           gi|565361832|ref|XP_006347657.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g13600-like isoform X2 [Solanum tuberosum]
          Length = 574

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 48/110 (43%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
 Frame = -3

Query: 329 QLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHF---VVMDEFTVVSVCAACT 159
           Q+ D +P+ ++VSYN++I SL   G   +A+  F+R  +      ++DEFTVV V  AC 
Sbjct: 99  QVLDVMPEPNVVSYNSVISSLTHHGLPGKAMGFFKRTQRQCGDEFLIDEFTVVGVVNACA 158

Query: 158 GLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
            LG L+ LR+LH    V G+ FNL++ N +ID+YGKCG  + S  VF QM
Sbjct: 159 CLGVLRLLRELHGFATVIGVRFNLVVCNALIDAYGKCGKPEYSYSVFCQM 208



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/118 (30%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
 Frame = -3

Query: 347 RIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCA 168
           R++ A  LFD +P +++V++  +I+  A+ G   +AL +F+ ML+  +V    T VSV +
Sbjct: 228 RLEDACSLFDNMPVRNVVAWTALIMGFAQNGEGEKALCIFKEMLEEGIVPSASTYVSVLS 287

Query: 167 ACTGLGFLKSLRQLHASVI----VSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQME 6
           AC  +  ++  +Q+H  +     +  L  N+ + N +ID Y KCGD+ S+  +F +++
Sbjct: 288 ACADIPIIEKGKQVHGHIFRYTCLIDLH-NVFVVNALIDMYCKCGDMISAMTLFGRLD 344


>ref|XP_006837084.1| hypothetical protein AMTR_s00110p00099550 [Amborella trichopoda]
           gi|548839677|gb|ERM99937.1| hypothetical protein
           AMTR_s00110p00099550 [Amborella trichopoda]
          Length = 683

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 47/114 (41%), Positives = 69/114 (60%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVC 171
           G I  A  LFD++P +  VSYNTMI    + G    AL++FR M      +D FTV SV 
Sbjct: 64  GFISDARNLFDKMPHRDSVSYNTMIACYDKYGPCENALEVFRAMKLSGSKVDHFTVSSVI 123

Query: 170 AACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           +AC  + FL   RQ+H+ VI  G+  N+ + + +++ YGKCGD+D ++ VF+ M
Sbjct: 124 SACMNISFLCQGRQVHSDVIKIGIGLNVYVGSALVEFYGKCGDIDEARKVFESM 177



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/114 (30%), Positives = 63/114 (55%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVC 171
           GRI+     F+ +P +++VS+ T+I    R G+  +A+  F  +    +  D    VS+ 
Sbjct: 196 GRIEDGILFFEEIPCKNVVSWTTIISGCVRCGWRDKAIHFFSGLRLANLKPDLVGFVSIV 255

Query: 170 AACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
            A + L  L+  +++H  +I +G E NL++ N ++D Y KCG +D +  VF+ M
Sbjct: 256 NAFSALYCLEEGQKVHGLIIKAGFESNLVVGNALVDMYAKCGSLDCASRVFEIM 309



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/107 (28%), Positives = 64/107 (59%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVC 171
           G  + A++LF+++P++++VS+NTM+   A+ G   +A+ L+  MLK   + D  +++ + 
Sbjct: 560 GMWESANELFEKMPEKNIVSWNTMLSGHAQNGSGFEAIKLYSLMLKSGELPDGISLICLL 619

Query: 170 AACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSS 30
           A C+     +  +Q+H+  I +G   NL + +V+I+ Y K  + + S
Sbjct: 620 AVCSNHILEEQGKQVHSHAIKTGYYMNLSVKSVIINMYHKLWNPNKS 666



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/103 (32%), Positives = 56/103 (54%)
 Frame = -3

Query: 326 LFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCAACTGLGF 147
           +FD + +++LVS+N MI   A+     +AL+LF +M    V +D  T+ S   ACT    
Sbjct: 436 VFDAIYEKNLVSWNAMINGYAQNEMGLEALELFCQMRALRVEIDRVTLSSALNACTSSLA 495

Query: 146 LKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVF 18
           L    Q++  +  +G   ++++   +ID YGKC D+D +   F
Sbjct: 496 LSMGNQINGVIHKAGYVHDVVVGTSLIDMYGKCRDMDHALCAF 538


>ref|XP_002531058.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529353|gb|EEF31319.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 49/115 (42%), Positives = 72/115 (62%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVC 171
           G+ + AH+LF+ +PD+ LV++NT I   A  G   +AL L+  M    V  D FT+VS+ 
Sbjct: 189 GQYESAHKLFEFMPDRDLVAWNTAISGFALNGKPNEALKLYMEMGLEGVEPDGFTLVSLL 248

Query: 170 AACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQME 6
           +AC  LG L   R++HA ++  GL+ NL  +N +ID Y KCG +  +Q VFD+ME
Sbjct: 249 SACAELGALALGRRIHAYMVKVGLDENLHANNSLIDLYAKCGRIRDAQQVFDEME 303


>ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
           mitochondrial-like [Vitis vinifera]
          Length = 623

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 47/114 (41%), Positives = 70/114 (61%)
 Frame = -3

Query: 350 GRIDLAHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVC 171
           GRI  A +LFD +P +  V++N M+ S ++ G H+QAL LF  M       D FT  +  
Sbjct: 19  GRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTFTATL 78

Query: 170 AACTGLGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           +AC GLG L+   ++HA V+VSG + +L + N +ID YGKC    S++ VF++M
Sbjct: 79  SACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEM 132



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/109 (32%), Positives = 61/109 (55%)
 Frame = -3

Query: 335 AHQLFDRLPDQHLVSYNTMILSLARQGFHRQALDLFRRMLKHFVVMDEFTVVSVCAACTG 156
           A  +F   P++++VS+ +MI   AR G   QAL  F +M+++ +  D+FT  +V  AC+ 
Sbjct: 288 AFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSS 347

Query: 155 LGFLKSLRQLHASVIVSGLEFNLIMSNVMIDSYGKCGDVDSSQHVFDQM 9
           L  L   + +H S+I  G    + + N +++ Y KCGD+  S   F ++
Sbjct: 348 LATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEI 396