BLASTX nr result
ID: Zingiber25_contig00047273
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00047273
(478 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004953114.1| PREDICTED: probable ATP-dependent DNA helica... 79 5e-13
ref|XP_003575366.1| PREDICTED: probable ATP-dependent DNA helica... 75 7e-12
ref|XP_002452453.1| hypothetical protein SORBIDRAFT_04g026080 [S... 75 9e-12
gb|AFW63012.1| hypothetical protein ZEAMMB73_474780 [Zea mays] 69 7e-10
gb|AFW63011.1| hypothetical protein ZEAMMB73_474780 [Zea mays] 69 7e-10
ref|XP_006647521.1| PREDICTED: probable ATP-dependent DNA helica... 65 1e-08
gb|EEE57380.1| hypothetical protein OsJ_07540 [Oryza sativa Japo... 64 2e-08
gb|ACI28521.1| rice meiotic crossover 1 [Oryza sativa Japonica G... 64 2e-08
gb|EEC73605.1| hypothetical protein OsI_08087 [Oryza sativa Indi... 61 2e-07
>ref|XP_004953114.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Setaria
italica]
Length = 1223
Score = 79.3 bits (194), Expect = 5e-13
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Frame = +2
Query: 2 NKIQSSMPSFDLLEDETVTDI----STPEPQQTECKTNSEKMIFDHIRKKSKTFPTSLTS 169
N +PSFDLL +E D+ STPEP + EC + + IFDHIRKKSK FPT + S
Sbjct: 932 NLASLEVPSFDLLSEEEYGDMQAAASTPEPAEAECISATSNTIFDHIRKKSKDFPTLVLS 991
Query: 170 TMMDYSHQPLLLRIAETPKN-LAYQRDGDYLGNIIVIDSEPTD 295
MD S++PL+L+ +T ++ ++ + G + +DSEP +
Sbjct: 992 KSMDSSYEPLILKKMKTSRDQFGVEQSSLHTGGVTPMDSEPAE 1034
>ref|XP_003575366.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like
[Brachypodium distachyon]
Length = 1208
Score = 75.5 bits (184), Expect = 7e-12
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Frame = +2
Query: 2 NKIQSSMPSFDLL---EDETVTDISTPEPQQTECKTNSEKMIFDHIRKKSKTFPTSLTST 172
N +PSFDLL +D + D+S P + CK+ S K IFDHIRKKS+ FPT + S
Sbjct: 936 NLASLEVPSFDLLLEEDDGDMQDVSVSGPAEAGCKSASSKTIFDHIRKKSRDFPTLMLSK 995
Query: 173 MMDYSHQPLLLRIAETP-KNLAYQRDGDYLGNIIVIDSEPTDAFLKVSSSTE 325
MD S++PL+L+ +T ++G + + +DSE T+A + +++ E
Sbjct: 996 SMDSSYEPLILKKMKTSIDQFDLDQEGLLVNEVTPMDSERTEARISPTTTAE 1047
>ref|XP_002452453.1| hypothetical protein SORBIDRAFT_04g026080 [Sorghum bicolor]
gi|241932284|gb|EES05429.1| hypothetical protein
SORBIDRAFT_04g026080 [Sorghum bicolor]
Length = 863
Score = 75.1 bits (183), Expect = 9e-12
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = +2
Query: 2 NKIQSSMPSFDLLEDETVTDISTPEPQQTECKTNSEKMIFDHIRKKSKTFPTSLTSTMMD 181
N +P+FDLL +E S P P+Q ECK+ ++ IFDHIRKKSK FPT + S MD
Sbjct: 502 NLASLEVPNFDLLPEEEYGAASAPGPEQAECKSATDNTIFDHIRKKSKEFPTLMVSKSMD 561
Query: 182 YSHQPLLLRIAETPKNLAYQRDGD-YLGNIIVIDSEPTDAFLKVSSSTE 325
S++PL+L+ + ++ G + +D EP + + ++++ E
Sbjct: 562 SSYEPLILKKMKISRDQFEVEHGCLHADEATTLDFEPVEPRVSLTNTAE 610
>gb|AFW63012.1| hypothetical protein ZEAMMB73_474780 [Zea mays]
Length = 1032
Score = 68.9 bits (167), Expect = 7e-10
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +2
Query: 2 NKIQSSMPSFDLLEDETVTDISTPEPQQTECKTNSEKMIFDHIRKKSKTFPTSLTSTMMD 181
N +PSFDLL +E + P P + ECK ++ IFDHIRKKSK FPT + S MD
Sbjct: 676 NLASLEVPSFDLLPEE---EYGAPGPAEAECKGATDSTIFDHIRKKSKDFPTLMLSKSMD 732
Query: 182 YSHQPLLLRIAETPKNLAYQRDGD-YLGNIIVIDSEPTDAFLKVSSSTE 325
S++PL+L+ + ++ + G + G +D +P + + +++ E
Sbjct: 733 CSYEPLILKKMKISRDQFGVKHGCLHAGEATTMDFDPVEPRVSPTNTAE 781
>gb|AFW63011.1| hypothetical protein ZEAMMB73_474780 [Zea mays]
Length = 1201
Score = 68.9 bits (167), Expect = 7e-10
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +2
Query: 2 NKIQSSMPSFDLLEDETVTDISTPEPQQTECKTNSEKMIFDHIRKKSKTFPTSLTSTMMD 181
N +PSFDLL +E + P P + ECK ++ IFDHIRKKSK FPT + S MD
Sbjct: 845 NLASLEVPSFDLLPEE---EYGAPGPAEAECKGATDSTIFDHIRKKSKDFPTLMLSKSMD 901
Query: 182 YSHQPLLLRIAETPKNLAYQRDGD-YLGNIIVIDSEPTDAFLKVSSSTE 325
S++PL+L+ + ++ + G + G +D +P + + +++ E
Sbjct: 902 CSYEPLILKKMKISRDQFGVKHGCLHAGEATTMDFDPVEPRVSPTNTAE 950
>ref|XP_006647521.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Oryza
brachyantha]
Length = 1205
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Frame = +2
Query: 2 NKIQSSMPSFDLLEDETVTDIS---TPEPQQTECKTNSEKMIFDHIRKKSKTFPTSLTST 172
N +PSF LL +E DI EP++ ECK+ + IF+HIRKKS+ FP L S
Sbjct: 938 NLASMEVPSFTLLPEEDYEDIQDELVSEPREAECKSATNNTIFEHIRKKSRDFPALLLSK 997
Query: 173 MMDYSHQPLLLRIAET 220
MD S++PL+L+ +T
Sbjct: 998 SMDSSYEPLILKKMKT 1013
>gb|EEE57380.1| hypothetical protein OsJ_07540 [Oryza sativa Japonica Group]
Length = 1105
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Frame = +2
Query: 23 PSFDLLEDET---VTDISTPEPQQTECKTNSEKMIFDHIRKKSKTFPTSLTSTMMDYSHQ 193
PSF LL +E V D+ EP + ECK+ + IFDHIRKKS+ FP + S MD S++
Sbjct: 845 PSFTLLHEEDYEDVPDVLASEPVEAECKSATNNTIFDHIRKKSRDFPNLMLSKSMDSSYE 904
Query: 194 PLLLRIAET 220
PL+L+ +T
Sbjct: 905 PLILKKMKT 913
>gb|ACI28521.1| rice meiotic crossover 1 [Oryza sativa Japonica Group]
Length = 1205
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Frame = +2
Query: 23 PSFDLLEDET---VTDISTPEPQQTECKTNSEKMIFDHIRKKSKTFPTSLTSTMMDYSHQ 193
PSF LL +E V D+ EP + ECK+ + IFDHIRKKS+ FP + S MD S++
Sbjct: 945 PSFTLLHEEDYEDVPDVLASEPVEAECKSATNNTIFDHIRKKSRDFPNLMLSKSMDSSYE 1004
Query: 194 PLLLRIAET 220
PL+L+ +T
Sbjct: 1005 PLILKKMKT 1013
>gb|EEC73605.1| hypothetical protein OsI_08087 [Oryza sativa Indica Group]
Length = 1115
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Frame = +2
Query: 23 PSFDLLEDET---VTDISTPEPQQTECKTNSEKMIFDHIRKKSKTFPTSLTSTMMDYSHQ 193
PSF LL +E V D+ EP + ECK+ + IF HIRKKS+ FP + S MD S++
Sbjct: 855 PSFTLLHEEDYEDVPDVLASEPVEAECKSATNNTIFYHIRKKSRDFPNLMLSKSMDSSYE 914
Query: 194 PLLLRIAET 220
PL+L+ +T
Sbjct: 915 PLILKKMKT 923