BLASTX nr result

ID: Zingiber25_contig00047172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00047172
         (417 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]     49   1e-10
gb|EOY21213.1| Uncharacterized protein TCM_012596 [Theobroma cacao]    51   5e-10
ref|XP_006494715.1| PREDICTED: uncharacterized protein LOC102612...    47   4e-08
gb|ACY01934.1| hypothetical protein [Beta vulgaris]                    41   6e-07
gb|EOY00167.1| Uncharacterized protein TCM_009852 [Theobroma cacao]    55   7e-06

>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score = 48.5 bits (114), Expect(2) = 1e-10
 Identities = 20/34 (58%), Positives = 26/34 (76%)
 Frame = -2

Query: 221 EHVDAIGNFNIRQDNSYSNTYNPGWKNHSNFSYR 120
           EHV+ + NFN + D  +SNTYNPGW+NH N SY+
Sbjct: 216 EHVNYMNNFNQKGD-PFSNTYNPGWRNHPNLSYK 248



 Score = 43.1 bits (100), Expect(2) = 1e-10
 Identities = 20/53 (37%), Positives = 32/53 (60%)
 Frame = -1

Query: 411 KALGKYDVDALSLISTKIYALTKKFESMNTSPANVIVSTCEECGGVEHAKEAC 253
           K  G+YDVDAL  I++++ AL +KF+ M+ +      + CE CG + H+   C
Sbjct: 150 KKSGRYDVDALDHIASRVDALFQKFDKMSMNSVASNSTNCEICGIIGHSAVEC 202


>gb|EOY21213.1| Uncharacterized protein TCM_012596 [Theobroma cacao]
          Length = 498

 Score = 51.2 bits (121), Expect(2) = 5e-10
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = -2

Query: 215 VDAIGNFNIRQDNSYSNTYNPGWKNHSNFSY 123
           V  +GNFN +Q+N YSNTYN GW+NH NFS+
Sbjct: 149 VHFVGNFNRQQNNPYSNTYNSGWRNHPNFSW 179



 Score = 38.1 bits (87), Expect(2) = 5e-10
 Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
 Frame = -1

Query: 417 PVKALGKYDVDAL----SLISTKIYALTKKFESMNTSPANVIVSTCEECGGVEHAKEACP 250
           P K +G Y++DAL    + ++ ++ AL KKF+++         + C+ CG   H+ + C 
Sbjct: 85  PRKVVGAYEIDALGTLTAQVAAEVVALFKKFDTLGVHTVQNSFTICKMCGN-SHSSDQCS 143

Query: 249 SHYSKV 232
            +++ V
Sbjct: 144 YNFASV 149


>ref|XP_006494715.1| PREDICTED: uncharacterized protein LOC102612045 [Citrus sinensis]
          Length = 810

 Score = 46.6 bits (109), Expect(2) = 4e-08
 Identities = 20/32 (62%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
 Frame = -2

Query: 215 VDAIGNFNIR-QDNSYSNTYNPGWKNHSNFSY 123
           V+ +GNFN + QDN YSNTYN GW+ H NFS+
Sbjct: 327 VNYVGNFNRQNQDNPYSNTYNSGWRQHLNFSW 358



 Score = 36.2 bits (82), Expect(2) = 4e-08
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
 Frame = -1

Query: 402 GKYDVDALSLISTKIYALTKKFESMNTSPANV---IVSTCEECGGVEHAKEACPSHYSKV 232
           G ++VDAL+ +S ++ +LTK  ++M T+PA V      +C  C G  H  + CP + + V
Sbjct: 269 GVHNVDALTALSAQVTSLTKMVKAMTTAPATVNQISDMSCVYC-GEGHLFDNCPGNPTSV 327


>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
          Length = 1717

 Score = 40.8 bits (94), Expect(2) = 6e-07
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 13/69 (18%)
 Frame = -1

Query: 414 VKALGKYDVDALSLISTKIYALTKKFESMN-------------TSPANVIVSTCEECGGV 274
           +K  GK+DV+A+SL+S ++  LT+K +S+               S +N  V  C+ CG  
Sbjct: 218 LKKGGKHDVEAISLLSGQLATLTQKIDSLKLGNDSSHMSVNAMASASNYNVHVCDACGIS 277

Query: 273 EHAKEACPS 247
            H  + CP+
Sbjct: 278 GHNSQECPA 286



 Score = 38.1 bits (87), Expect(2) = 6e-07
 Identities = 18/34 (52%), Positives = 21/34 (61%)
 Frame = -2

Query: 221 EHVDAIGNFNIRQDNSYSNTYNPGWKNHSNFSYR 120
           E V+A  +    Q N YSNTYNPG + H N SYR
Sbjct: 292 EAVNAFQSQPRNQFNPYSNTYNPGLRQHPNLSYR 325


>gb|EOY00167.1| Uncharacterized protein TCM_009852 [Theobroma cacao]
          Length = 211

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 22/36 (61%), Positives = 27/36 (75%)
 Frame = -2

Query: 230 AQLEHVDAIGNFNIRQDNSYSNTYNPGWKNHSNFSY 123
           +  E V  +GNFN +Q N YSNTYNPGW+NH NFS+
Sbjct: 96  SNFESVKFVGNFNKQQTNPYSNTYNPGWRNHRNFSW 131


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