BLASTX nr result
ID: Zingiber25_contig00046743
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00046743
(314 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT09059.1| hypothetical protein F775_03374 [Aegilops tauschii] 79 8e-13
ref|XP_003581265.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 78 1e-12
gb|EXC04260.1| hypothetical protein L484_002345 [Morus notabilis] 66 5e-09
ref|NP_001046588.1| Os02g0290000 [Oryza sativa Japonica Group] g... 63 4e-08
gb|EEC72942.1| hypothetical protein OsI_06806 [Oryza sativa Indi... 63 4e-08
ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citr... 61 1e-07
ref|XP_006586917.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
ref|XP_004970818.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
gb|EXB75130.1| hypothetical protein L484_025905 [Morus notabilis] 59 5e-07
ref|NP_200075.1| pentatricopeptide repeat protein MEF1 [Arabidop... 59 5e-07
ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
ref|XP_002864185.1| pentatricopeptide repeat-containing protein ... 59 5e-07
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera] 59 5e-07
emb|CDL67990.1| putative pentatricopeptide repeat-containing pro... 59 7e-07
ref|XP_006852367.1| hypothetical protein AMTR_s00049p00223290 [A... 59 7e-07
ref|XP_006842433.1| hypothetical protein AMTR_s00077p00031710 [A... 59 7e-07
gb|EPS61875.1| hypothetical protein M569_12918, partial [Genlise... 59 7e-07
ref|XP_002511599.1| pentatricopeptide repeat-containing protein,... 59 7e-07
>gb|EMT09059.1| hypothetical protein F775_03374 [Aegilops tauschii]
Length = 873
Score = 78.6 bits (192), Expect = 8e-13
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +1
Query: 1 PDSKNCNKRIRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGP- 177
PD + C++ +R T+ +HY S+ + + ML L PD ALAA IKSA + L D G
Sbjct: 47 PDHRQCSELLRARTASGDHYGSVCLVRGMLGRDLRPDRLALAAAIKSA---SALPDSGAL 103
Query: 178 AEAIHGFAMKTGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
+HGF ++ G AV KA++DMY + GAL +R VF EM
Sbjct: 104 GSCLHGFVVRLGNAAGVAVAKAIMDMYGRRGALTDARLVFDEM 146
>ref|XP_003581265.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g08490-like [Brachypodium
distachyon]
Length = 929
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/101 (39%), Positives = 62/101 (61%)
Frame = +1
Query: 4 DSKNCNKRIRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGPAE 183
D ++C++ +R T++ +H S+S+ + ML L PD ALAA IKSA+ + +G
Sbjct: 49 DHRHCSELLRARTANGDHSGSISLLRGMLGRGLRPDRLALAAAIKSASALRDGESLG--R 106
Query: 184 AIHGFAMKTGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
+HGF ++TG+ AV KA++DMY + G L +R VF EM
Sbjct: 107 CLHGFVVRTGHAAGVAVAKAVMDMYGRCGTLADARLVFDEM 147
>gb|EXC04260.1| hypothetical protein L484_002345 [Morus notabilis]
Length = 1455
Score = 65.9 bits (159), Expect = 5e-09
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Frame = +1
Query: 1 PDSKNCNKRIRCYTSDHEHYASLSMFKRMLSAQL--MPDSFALAATIKSAAGVTVLLDMG 174
PDSK +IR Y+ D H +LS+F L L PD L+A +KS A L +
Sbjct: 372 PDSKMWGAKIRSYSVDTRHNEALSLFLGNLRCSLGFKPDHLVLSAILKSCAA---LFAIN 428
Query: 175 PAEAIHGFAMKTGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
+A+HG+ +K G+V V KA+++MYAK G L +R+F M
Sbjct: 429 FGKALHGYVVKQGHVSCRFVSKALLNMYAKCGKLDDCKRLFGHM 472
>ref|NP_001046588.1| Os02g0290000 [Oryza sativa Japonica Group]
gi|47847947|dbj|BAD21737.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa Japonica
Group] gi|113536119|dbj|BAF08502.1| Os02g0290000 [Oryza
sativa Japonica Group]
Length = 930
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +1
Query: 4 DSKNCNKRIRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGP-A 180
D C+ +R +HY S+ + ML+ L P+ ALAA +KS++ +
Sbjct: 54 DRMRCSALLRERAVGGDHYGCTSLLRWMLARGLRPNRLALAAAVKSSSALPDCRGGAALG 113
Query: 181 EAIHGFAMKTGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
+HG A+K GY A V KA++DMY + G+L + VF EM
Sbjct: 114 RCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEM 155
>gb|EEC72942.1| hypothetical protein OsI_06806 [Oryza sativa Indica Group]
Length = 1030
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +1
Query: 4 DSKNCNKRIRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGP-A 180
D C+ +R +HY S+ + ML+ L P+ ALAA +KS++ +
Sbjct: 54 DRMRCSALLRERAVGGDHYGCTSLLRWMLARGLRPNRLALAAAVKSSSALPDCRGGAALG 113
Query: 181 EAIHGFAMKTGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
+HG A+K GY A V KA++DMY + G+L + VF EM
Sbjct: 114 RCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEM 155
>ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citrus clementina]
gi|568830445|ref|XP_006469509.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Citrus sinensis]
gi|557550368|gb|ESR60997.1| hypothetical protein
CICLE_v10014482mg [Citrus clementina]
Length = 689
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/97 (34%), Positives = 52/97 (53%)
Frame = +1
Query: 19 NKRIRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGPAEAIHGF 198
N I+CY + + +L++F +L L+PD+F L IK AA + + + + IHG
Sbjct: 91 NLLIKCYVFNQRSHEALTLFCDLLHRFLLPDNFTLPCVIKGAARLGAIKE---GKQIHGL 147
Query: 199 AMKTGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEMD 309
K G+ V +++ MYAKFG + RRVF +D
Sbjct: 148 VFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDVLD 184
>ref|XP_006586917.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Glycine max]
Length = 542
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/96 (35%), Positives = 56/96 (58%)
Frame = +1
Query: 19 NKRIRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGPAEAIHGF 198
N I Y + + +LS+F+RMLSA++ PD F A+ + + A + L G A+ +HG
Sbjct: 142 NSMIGGYVRNLRFFDALSIFRRMLSAKVEPDGFTFASVVTACARLGAL---GNAKWVHGL 198
Query: 199 AMKTGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
++ + + A+IDMYAK G + SR+VF+E+
Sbjct: 199 MVEKRVELNYILSAALIDMYAKCGRIDVSRQVFEEV 234
>ref|XP_004970818.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Setaria italica]
Length = 517
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/84 (36%), Positives = 54/84 (64%)
Frame = +1
Query: 55 HYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGPAEAIHGFAMKTGYVVFAAV 234
H A++ +++ M +A + PD FA+A + S AG T +L++G ++H A++ G++ F +V
Sbjct: 126 HDAAVRVYRGMAAAGVDPDEFAVAGVLSSCAGST-MLELG--RSVHAAAVRLGFLPFLSV 182
Query: 235 QKAMIDMYAKFGALCSSRRVFKEM 306
+++ MYAK GAL +R VF M
Sbjct: 183 GNSLVSMYAKTGALRDARTVFDAM 206
>ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 59.7 bits (143), Expect = 4e-07
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Frame = +1
Query: 1 PDSKNC---NKRIRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDM 171
PD KN + Y + Y SL F RM S + PD A+ +K+ + +T L D
Sbjct: 566 PDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSD- 624
Query: 172 GPAEAIHGFAMKTGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEMDS 312
+ IHG +K+G+ + A+IDMY+K G + SS FKE+ S
Sbjct: 625 --GKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKS 669
>gb|EXB75130.1| hypothetical protein L484_025905 [Morus notabilis]
Length = 554
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/96 (35%), Positives = 50/96 (52%)
Frame = +1
Query: 19 NKRIRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGPAEAIHGF 198
N IR Y +D Y +L + M+ A++ P S+ + I++ T+L G EA+HG
Sbjct: 73 NAMIRGYVNDGYPYQALECYVDMMRAKVSPTSYTFPSLIRAC---TLLFVPGFGEAVHGH 129
Query: 199 AMKTGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
+ G VQ AM+D Y+K + SRRVF EM
Sbjct: 130 IWRNGLDSHVYVQTAMVDFYSKLSRIKDSRRVFDEM 165
>ref|NP_200075.1| pentatricopeptide repeat protein MEF1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At5g52630 gi|8953718|dbj|BAA98081.1|
selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| pentatricopeptide repeat
protein MEF1 [Arabidopsis thaliana]
Length = 588
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/93 (34%), Positives = 51/93 (54%)
Frame = +1
Query: 28 IRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGPAEAIHGFAMK 207
I C+ + + SL K+M++ L PD L + KS A + D+G ++H +MK
Sbjct: 88 ISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCA-ILSRCDIG--RSVHCLSMK 144
Query: 208 TGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
TGY V +++DMYAK G + +R++F EM
Sbjct: 145 TGYDADVFVGSSLVDMYAKCGEIVYARKMFDEM 177
>ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 59.3 bits (142), Expect = 5e-07
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +1
Query: 1 PDSKNCNKRIRCYTSDHEHYASLSMFKRMLSAQ-LMPDSFALAATIKSAAGVTVLLDMGP 177
P+ + N IR YT +H+H ++++F +ML+ + PD F IKS AG LL
Sbjct: 68 PNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAG---LLCRRL 124
Query: 178 AEAIHGFAMKTGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
+ +H K G A + A+IDMY K G + + +V++EM
Sbjct: 125 GQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEM 167
>ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297310020|gb|EFH40444.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 588
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/93 (33%), Positives = 52/93 (55%)
Frame = +1
Query: 28 IRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGPAEAIHGFAMK 207
I C+ + + SL ++M++ L PD L + KS G+ D+G +++H +MK
Sbjct: 88 ISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSC-GILSRCDIG--KSVHCLSMK 144
Query: 208 TGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
TGY V +++DMYAK G + +R++F EM
Sbjct: 145 TGYDADVFVGSSLVDMYAKCGEIVYARKMFDEM 177
>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/93 (33%), Positives = 53/93 (56%)
Frame = +1
Query: 28 IRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGPAEAIHGFAMK 207
I ++ H+ + +LS F +ML+ LMPD+ L + +K+ AG++ L PA +HG A
Sbjct: 86 IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALK---PARQVHGIASV 142
Query: 208 TGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
+G+ + VQ +++ MY K + + RVF M
Sbjct: 143 SGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM 175
>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/93 (33%), Positives = 53/93 (56%)
Frame = +1
Query: 28 IRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGPAEAIHGFAMK 207
I ++ H+ + +LS F +ML+ LMPD+ L + +K+ AG++ L PA +HG A
Sbjct: 86 IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALK---PARQVHGIASV 142
Query: 208 TGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
+G+ + VQ +++ MY K + + RVF M
Sbjct: 143 SGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM 175
>emb|CDL67990.1| putative pentatricopeptide repeat-containing protein At1g31920,
partial [Olea europaea]
Length = 199
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/103 (33%), Positives = 54/103 (52%)
Frame = +1
Query: 1 PDSKNCNKRIRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGPA 180
P S N IR + D +L ++ ML ++ D+F A +K+ +G++ LL+
Sbjct: 59 PGSFEFNTMIRGHNKDVNFAEALFIYIEMLEREVEQDNFTFPAILKACSGLSALLE---G 115
Query: 181 EAIHGFAMKTGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEMD 309
IHG K GYV VQ ++I+MY K G + S VF++MD
Sbjct: 116 MQIHGQIFKLGYVEDLFVQNSLINMYGKCGKISHSCAVFEQMD 158
>ref|XP_006852367.1| hypothetical protein AMTR_s00049p00223290 [Amborella trichopoda]
gi|548855971|gb|ERN13834.1| hypothetical protein
AMTR_s00049p00223290 [Amborella trichopoda]
Length = 326
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/83 (40%), Positives = 48/83 (57%)
Frame = +1
Query: 58 YASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGPAEAIHGFAMKTGYVVFAAVQ 237
+ +L++F RM D F L+ +K A G T L G E++HGF++KTG+V V
Sbjct: 58 FEALALFSRMREEGTRIDEFVLSLILK-ACGTTNQLKQG--ESLHGFSVKTGFVNCVFVG 114
Query: 238 KAMIDMYAKFGALCSSRRVFKEM 306
A++DMY K G + SR VF EM
Sbjct: 115 SAILDMYTKTGCISKSRDVFHEM 137
>ref|XP_006842433.1| hypothetical protein AMTR_s00077p00031710 [Amborella trichopoda]
gi|548844519|gb|ERN04108.1| hypothetical protein
AMTR_s00077p00031710 [Amborella trichopoda]
Length = 932
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/93 (33%), Positives = 52/93 (55%)
Frame = +1
Query: 28 IRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGPAEAIHGFAMK 207
I Y + + ++ MF +M L P+ F ++ + +G++ LL+ G E IHG K
Sbjct: 616 ITAYAQNWQGDKAMEMFSKMRMENLSPNQFTFSSVLMGCSGLS-LLEYG--EQIHGLVYK 672
Query: 208 TGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
G+ +A V ++IDMYAK G + +R+VFK +
Sbjct: 673 LGFNEYACVGSSLIDMYAKCGCVLGARKVFKRV 705
>gb|EPS61875.1| hypothetical protein M569_12918, partial [Genlisea aurea]
Length = 560
Score = 58.9 bits (141), Expect = 7e-07
Identities = 37/102 (36%), Positives = 53/102 (51%)
Frame = +1
Query: 4 DSKNCNKRIRCYTSDHEHYASLSMFKRMLSAQLMPDSFALAATIKSAAGVTVLLDMGPAE 183
D +CN I Y + Y SLS+F+ S +L P F + + +AA G E
Sbjct: 250 DIISCNTMIASYQKS-DPYRSLSLFR---SLELAPTPFTFTSAVAAAATAAAF---GVGE 302
Query: 184 AIHGFAMKTGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEMD 309
+HG A++ G V A+IDMYAK G++ SRRVF+E +
Sbjct: 303 QVHGSAVRRGMESDVGVANALIDMYAKCGSIGRSRRVFEETE 344
>ref|XP_002511599.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548779|gb|EEF50268.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 429
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +1
Query: 4 DSKNCNKRIRCYTSDHEHYASLSMFKRMLSAQ-LMPDSFALAATIKSAAGVTVLLDMGPA 180
D+ CN I+ + + Y S ++++ + +PD+F A KS L+M
Sbjct: 51 DTFLCNSMIKAHVGMRQFYESFTLYQDLRKGTGFLPDNFTFTALAKSCG-----LNMAVW 105
Query: 181 EA--IHGFAMKTGYVVFAAVQKAMIDMYAKFGALCSSRRVFKEM 306
E IH +K G+ + V A++DMYAKFG LC +R++F EM
Sbjct: 106 EGFEIHNHVLKMGFGLDLYVSTALVDMYAKFGELCMARKMFDEM 149