BLASTX nr result
ID: Zingiber25_contig00046724
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00046724
(363 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006847909.1| hypothetical protein AMTR_s00029p00111980 [A... 72 6e-11
ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
emb|CBI39592.3| unnamed protein product [Vitis vinifera] 72 6e-11
gb|EOY11651.1| Pentatricopeptide repeat (PPR-like) superfamily p... 72 8e-11
gb|EOY11650.1| Pentatricopeptide repeat (PPR-like) superfamily p... 72 8e-11
gb|EMJ05235.1| hypothetical protein PRUPE_ppa020827mg [Prunus pe... 70 3e-10
ref|XP_002892528.1| pentatricopeptide repeat-containing protein ... 70 3e-10
ref|XP_006344758.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
ref|XP_004231292.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containi... 69 6e-10
ref|NP_172453.1| pentatricopeptide repeat-containing protein [Ar... 69 8e-10
ref|XP_006404526.1| hypothetical protein EUTSA_v10000737mg, part... 68 1e-09
ref|XP_006417529.1| hypothetical protein EUTSA_v10009487mg, part... 67 2e-09
ref|XP_004289096.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_006303544.1| hypothetical protein CARUB_v10010987mg [Caps... 67 3e-09
ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_006662452.1| PREDICTED: pentatricopeptide repeat-containi... 66 5e-09
ref|XP_006472193.1| PREDICTED: pentatricopeptide repeat-containi... 66 5e-09
ref|XP_006433532.1| hypothetical protein CICLE_v10003346mg [Citr... 66 5e-09
ref|XP_006382397.1| hypothetical protein POPTR_0005s01750g [Popu... 66 5e-09
>ref|XP_006847909.1| hypothetical protein AMTR_s00029p00111980 [Amborella trichopoda]
gi|548851214|gb|ERN09490.1| hypothetical protein
AMTR_s00029p00111980 [Amborella trichopoda]
Length = 618
Score = 72.4 bits (176), Expect = 6e-11
Identities = 30/45 (66%), Positives = 42/45 (93%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHL 135
GKME+A+ LLN++LEKGL+PN VTY +++DEMIEKG++P+I+GHL
Sbjct: 569 GKMEEANRLLNELLEKGLVPNHVTYDLVRDEMIEKGFMPDIEGHL 613
>ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 72.4 bits (176), Expect = 6e-11
Identities = 30/49 (61%), Positives = 44/49 (89%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSS 147
GK+E+A+ LLN++LEKGL+PNR TY +++DEM+EKG++P+IDGHL + S
Sbjct: 558 GKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLYNVS 606
>emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 72.4 bits (176), Expect = 6e-11
Identities = 30/49 (61%), Positives = 44/49 (89%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSS 147
GK+E+A+ LLN++LEKGL+PNR TY +++DEM+EKG++P+IDGHL + S
Sbjct: 526 GKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLYNVS 574
>gb|EOY11651.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 2
[Theobroma cacao] gi|508719755|gb|EOY11652.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 2 [Theobroma cacao]
Length = 448
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/51 (60%), Positives = 45/51 (88%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSSSA 153
GK+E A+ LLN++LEKGL+PNR TY ++K+EM+EKG+VP+I+GHL S S++
Sbjct: 398 GKLEDANGLLNEMLEKGLIPNRTTYEIVKEEMVEKGFVPDIEGHLYSISAS 448
>gb|EOY11650.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 587
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/51 (60%), Positives = 45/51 (88%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSSSA 153
GK+E A+ LLN++LEKGL+PNR TY ++K+EM+EKG+VP+I+GHL S S++
Sbjct: 537 GKLEDANGLLNEMLEKGLIPNRTTYEIVKEEMVEKGFVPDIEGHLYSISAS 587
>gb|EMJ05235.1| hypothetical protein PRUPE_ppa020827mg [Prunus persica]
Length = 447
Score = 70.1 bits (170), Expect = 3e-10
Identities = 30/50 (60%), Positives = 45/50 (90%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSSS 150
GK++ A+ELLN++LEKGL+PNR TY ++K+EM+EKG++P+I+GHL + SS
Sbjct: 397 GKLKVANELLNEMLEKGLVPNRTTYEIVKEEMMEKGFLPDIEGHLYNISS 446
>ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338370|gb|EFH68787.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 606
Score = 70.1 bits (170), Expect = 3e-10
Identities = 29/50 (58%), Positives = 45/50 (90%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSSS 150
GK+E A+ LLN++LEKGL+PNR+TY ++K+EM++KG+VP+I+GHL + S+
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDIEGHLFNVST 604
>ref|XP_006344758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like isoform X1 [Solanum tuberosum]
gi|565355778|ref|XP_006344759.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g09820-like isoform X2 [Solanum tuberosum]
Length = 605
Score = 69.7 bits (169), Expect = 4e-10
Identities = 29/44 (65%), Positives = 42/44 (95%)
Frame = +1
Query: 4 KMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHL 135
K+E+A+ LLN++LEKGL+PNR+TY +I++EMI+KG+VP+IDGHL
Sbjct: 555 KLEEANALLNEMLEKGLVPNRITYDIIREEMIDKGFVPDIDGHL 598
>ref|XP_004231292.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Solanum lycopersicum]
Length = 605
Score = 69.7 bits (169), Expect = 4e-10
Identities = 29/44 (65%), Positives = 42/44 (95%)
Frame = +1
Query: 4 KMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHL 135
K+E+A+ LLN++LEKGL+PNR+TY +I++EMI+KG+VP+IDGHL
Sbjct: 555 KLEEANALLNEMLEKGLVPNRITYDIIREEMIDKGFVPDIDGHL 598
>ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 68.9 bits (167), Expect = 6e-10
Identities = 30/49 (61%), Positives = 43/49 (87%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSS 147
GK+E A+ LLN++LEKGL+PNR TY +IK+EM+EKG++P+I+GHL +S
Sbjct: 562 GKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYHAS 610
>ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g09820 gi|2160173|gb|AAB60736.1| Similar to N.
tabacum salt-inducible protein (gb|U08285) [Arabidopsis
thaliana] gi|332190378|gb|AEE28499.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 68.6 bits (166), Expect = 8e-10
Identities = 28/50 (56%), Positives = 45/50 (90%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSSS 150
GK+E A+ LLN++LEKGL+PNR+TY ++K+EM+++G+VP+I+GHL + S+
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVST 604
>ref|XP_006404526.1| hypothetical protein EUTSA_v10000737mg, partial [Eutrema
salsugineum] gi|557105651|gb|ESQ45979.1| hypothetical
protein EUTSA_v10000737mg, partial [Eutrema salsugineum]
Length = 488
Score = 68.2 bits (165), Expect = 1e-09
Identities = 29/50 (58%), Positives = 43/50 (86%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSSS 150
GK+E A+ LLN++LEKGL+PNR+TY + K EM++KG+VP+I+GHL + S+
Sbjct: 437 GKLEDANRLLNEMLEKGLVPNRITYEIFKAEMVDKGFVPDIEGHLFNVST 486
>ref|XP_006417529.1| hypothetical protein EUTSA_v10009487mg, partial [Eutrema
salsugineum] gi|557095300|gb|ESQ35882.1| hypothetical
protein EUTSA_v10009487mg, partial [Eutrema salsugineum]
Length = 592
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/50 (56%), Positives = 43/50 (86%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSSS 150
GK+E A+ LLN++LE GL+PNR+TY ++K EM++KG+VP+I+GHL + S+
Sbjct: 541 GKLEDANRLLNEMLENGLVPNRITYEIVKAEMVDKGFVPDIEGHLFNVST 590
>ref|XP_004289096.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Fragaria vesca subsp. vesca]
Length = 608
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/50 (60%), Positives = 43/50 (86%)
Frame = +1
Query: 4 KMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSSSA 153
K+ A+ELLN++LEKGL+PNR TY ++K EM++KG+VP+IDGHL + SS+
Sbjct: 559 KLVDANELLNEMLEKGLIPNRTTYEIVKVEMMDKGFVPDIDGHLHNISSS 608
>ref|XP_006303544.1| hypothetical protein CARUB_v10010987mg [Capsella rubella]
gi|482572255|gb|EOA36442.1| hypothetical protein
CARUB_v10010987mg [Capsella rubella]
Length = 606
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/50 (58%), Positives = 43/50 (86%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSSS 150
GK+E A+ LLN++LEKGL+PNR TY ++K EM++KG+VP+I+GHL + S+
Sbjct: 555 GKLEDANILLNEMLEKGLVPNRTTYEIVKVEMVDKGFVPDIEGHLFNVST 604
>ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/50 (58%), Positives = 42/50 (84%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSSS 150
GK+E A+ LLN++LEKGL PNR TY +++ EM+EKG++P+I+GHL + SS
Sbjct: 532 GKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEGHLYNISS 581
>ref|XP_006662452.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like, partial [Oryza brachyantha]
Length = 526
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/50 (58%), Positives = 42/50 (84%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSSS 150
GKME+AD+L+N++L+KGL+PN +TY IK++M+EKGYVP+I G S +S
Sbjct: 472 GKMEQADDLINEMLDKGLVPNTITYETIKEKMMEKGYVPDIRGCTVSQAS 521
>ref|XP_006472193.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like isoform X1 [Citrus sinensis]
gi|568836322|ref|XP_006472194.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g09820-like isoform X2 [Citrus sinensis]
Length = 595
Score = 65.9 bits (159), Expect = 5e-09
Identities = 26/49 (53%), Positives = 43/49 (87%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSS 147
GK+E A+ LLN++LEKGL+PN+ TY ++++EM+EKG++P+I+GH+ + S
Sbjct: 544 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 592
>ref|XP_006433532.1| hypothetical protein CICLE_v10003346mg [Citrus clementina]
gi|557535654|gb|ESR46772.1| hypothetical protein
CICLE_v10003346mg [Citrus clementina]
Length = 596
Score = 65.9 bits (159), Expect = 5e-09
Identities = 26/49 (53%), Positives = 43/49 (87%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSS 147
GK+E A+ LLN++LEKGL+PN+ TY ++++EM+EKG++P+I+GH+ + S
Sbjct: 545 GKLEDANGLLNELLEKGLIPNQTTYQIVREEMMEKGFIPDIEGHMYNIS 593
>ref|XP_006382397.1| hypothetical protein POPTR_0005s01750g [Populus trichocarpa]
gi|550337757|gb|ERP60194.1| hypothetical protein
POPTR_0005s01750g [Populus trichocarpa]
Length = 453
Score = 65.9 bits (159), Expect = 5e-09
Identities = 28/49 (57%), Positives = 43/49 (87%)
Frame = +1
Query: 1 GKMEKADELLNKILEKGLLPNRVTYGMIKDEMIEKGYVPNIDGHLCSSS 147
G++E A+ LLN++LE+GL+PNR TY +IK+EM+EKG+VP+I+GH+ + S
Sbjct: 398 GRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPDIEGHVYNVS 446