BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00046671
         (389 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao s...   166   2e-39
emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]               164   1e-38
emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]               163   2e-38
emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]               162   3e-38
ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|3478...   161   1e-37
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]...   160   1e-37
gb|AER45369.1| polyprotein, partial [Fig badnavirus 1]                157   1e-36
gb|AER45361.1| polyprotein, partial [Fig badnavirus 1]                157   1e-36
gb|AER45339.1| polyprotein, partial [Fig badnavirus 1]                157   1e-36
gb|AFF58911.1| polyprotein, partial [Fig badnavirus 1] gi|381144...   157   2e-36
gb|AER45335.1| polyprotein, partial [Fig badnavirus 1] gi|354990...   157   2e-36
gb|AER45329.1| polyprotein, partial [Fig badnavirus 1] gi|354990...   157   2e-36
gb|AER45323.1| polyprotein, partial [Fig badnavirus 1] gi|354990...   157   2e-36
gb|AER42640.1| polyprotein, partial [Fig badnavirus 1] gi|381144...   157   2e-36
gb|AER42638.1| polyprotein, partial [Fig badnavirus 1] gi|354832...   157   2e-36
gb|AFF58899.1| polyprotein, partial [Fig badnavirus 1]                156   2e-36
gb|AER45327.1| polyprotein, partial [Fig badnavirus 1] gi|354990...   156   2e-36
gb|AER45353.1| polyprotein, partial [Fig badnavirus 1]                155   5e-36
gb|AER45341.1| polyprotein, partial [Fig badnavirus 1]                155   5e-36
gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]                154   9e-36

>emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot virus]
          Length = 1868

 Score =  166 bits (421), Expect = 2e-39
 Identities = 82/129 (63%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
 Frame = +1

Query: 1   QAHRRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRR 180
           +  RR +N +R  +R+   +TG  Y  +LEQ++DPQ  LRLSMQERA +VPAEVLY SRR
Sbjct: 35  RGQRRIFNLRRQARRLRRSVTGSRYQETLEQEIDPQTTLRLSMQERARLVPAEVLYRSRR 94

Query: 181 DDVHHRVYVHRSEEALL-VTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQ 357
           D VHHRVY HRSEE++L +  NQVD +FIQPES  QLQR+GM FIH+G++QVRIQILHRQ
Sbjct: 95  DTVHHRVYTHRSEESVLCIGNNQVDRAFIQPESLEQLQRTGMSFIHIGILQVRIQILHRQ 154

Query: 358 EEGTLALEI 384
           EEGT+AL +
Sbjct: 155 EEGTMALVV 163


>emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]
          Length = 1847

 Score =  164 bits (414), Expect = 1e-38
 Identities = 82/129 (63%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
 Frame = +1

Query: 1   QAHRRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRR 180
           ++ RR +N +R  +R+   + G  Y  +LEQ++DPQ  LRLSMQERA +VPAEVLY SRR
Sbjct: 36  RSQRRIFNLRRNARRLRRSMMGSRYQETLEQEIDPQTTLRLSMQERARLVPAEVLYRSRR 95

Query: 181 DDVHHRVYVHRSEEALL-VTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQ 357
           D VHHRVY HRSEE++L V  NQVD +FIQPES  QLQR+GM FIH+G++QVRIQILHRQ
Sbjct: 96  DTVHHRVYTHRSEESVLCVGGNQVDRAFIQPESLEQLQRTGMSFIHIGILQVRIQILHRQ 155

Query: 358 EEGTLALEI 384
           EEGT+AL +
Sbjct: 156 EEGTMALVV 164


>emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]
          Length = 1816

 Score =  163 bits (413), Expect = 2e-38
 Identities = 82/129 (63%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
 Frame = +1

Query: 1   QAHRRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRR 180
           ++ RR +N +R  +R+   + G  Y  +LEQ++DPQ  LRLSMQERA +VPAEVLY SRR
Sbjct: 36  RSQRRIFNLRRRARRLRRSMMGSRYQETLEQEIDPQTTLRLSMQERARLVPAEVLYRSRR 95

Query: 181 DDVHHRVYVHRSEEALL-VTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQ 357
           D VHHRVY HRSEE++L V  NQVD +FIQPES  QLQR+GM FIH+G++QVRIQILHRQ
Sbjct: 96  DTVHHRVYTHRSEESVLCVGGNQVDRAFIQPESLEQLQRTGMSFIHIGILQVRIQILHRQ 155

Query: 358 EEGTLALEI 384
           EEGT+AL +
Sbjct: 156 EEGTMALVV 164


>emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]
          Length = 1839

 Score =  162 bits (411), Expect = 3e-38
 Identities = 82/129 (63%), Positives = 101/129 (78%), Gaps = 1/129 (0%)
 Frame = +1

Query: 1   QAHRRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRR 180
           +  RR +N QR  +R+   + G  Y  +LEQ++DPQ  LRLSMQERA +VPAEVLY SRR
Sbjct: 36  RGQRRIFNLQRRARRLRRSMMGSRYQETLEQEIDPQTTLRLSMQERARLVPAEVLYRSRR 95

Query: 181 DDVHHRVYVHRSEEALL-VTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQ 357
           D VHHRVY HRSEE++L V  +QVD +FIQPES  QLQR+GM FIH+G++QVRIQILHRQ
Sbjct: 96  DTVHHRVYTHRSEESVLCVGGSQVDRAFIQPESLEQLQRTGMSFIHIGILQVRIQILHRQ 155

Query: 358 EEGTLALEI 384
           EEGT+AL +
Sbjct: 156 EEGTMALVV 164


>ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|347871|gb|AAA03171.1|
           polyprotein [Cacao swollen shoot virus]
          Length = 1834

 Score =  161 bits (407), Expect = 1e-37
 Identities = 81/129 (62%), Positives = 101/129 (78%), Gaps = 1/129 (0%)
 Frame = +1

Query: 1   QAHRRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRR 180
           +  RR +N +R  +R+   + G  Y  +LEQ++DPQ  LRLSMQERA +VPAEVLY SRR
Sbjct: 36  RGQRRIFNLRRRARRLRRSMMGSRYQETLEQEIDPQTTLRLSMQERARLVPAEVLYRSRR 95

Query: 181 DDVHHRVYVHRSEEALL-VTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQ 357
           D VHHRVY HRSEE++L V  +QVD +FIQPES  QLQR+GM FIH+G++QVRIQILHRQ
Sbjct: 96  DTVHHRVYTHRSEESVLCVGGSQVDRAFIQPESLEQLQRTGMSFIHIGILQVRIQILHRQ 155

Query: 358 EEGTLALEI 384
           EEGT+AL +
Sbjct: 156 EEGTMALVV 164


>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
           gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
           bacilliform virus GD1]
          Length = 1892

 Score =  160 bits (406), Expect = 1e-37
 Identities = 80/129 (62%), Positives = 101/129 (78%), Gaps = 2/129 (1%)
 Frame = +1

Query: 4   AHRRRYNAQRTIQRMAGHITGRT-YTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRR 180
           + RR Y  QR ++R+   ITGR  Y  +LEQ++DPQ  L++SMQERA +VPAEVLY SRR
Sbjct: 39  SQRRAYTTQRAVRRLRRRITGRQPYQETLEQEVDPQADLQMSMQERARLVPAEVLYRSRR 98

Query: 181 DDVHHRVYVHRSEEALLVT-RNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQ 357
           D +HHRVY HRSEEA+L T  NQVD +FIQPES   LQR+G+ FIH+G++QVR+QILHRQ
Sbjct: 99  DTIHHRVYSHRSEEAILCTDGNQVDRTFIQPESMEALQRTGISFIHIGIMQVRLQILHRQ 158

Query: 358 EEGTLALEI 384
            EGT+AL +
Sbjct: 159 NEGTMALVV 167


>gb|AER45369.1| polyprotein, partial [Fig badnavirus 1]
          Length = 198

 Score =  157 bits (397), Expect = 1e-36
 Identities = 74/125 (59%), Positives = 100/125 (80%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRDDV 189
           RRR+ A++ ++R  G + GR Y ++LEQ +DP+V+L  SMQERA +VPAEVLY SRRD++
Sbjct: 41  RRRFVAEQAVRRTTGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNI 100

Query: 190 HHRVYVHRSEEALLVTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQEEGT 369
           +H+VY HRSEEA+L    Q D  FIQP S+ +LQRSGM+FIH+GV+QVR+QILHR +EGT
Sbjct: 101 NHQVYNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRTDEGT 160

Query: 370 LALEI 384
           +AL +
Sbjct: 161 MALVV 165


>gb|AER45361.1| polyprotein, partial [Fig badnavirus 1]
          Length = 198

 Score =  157 bits (397), Expect = 1e-36
 Identities = 74/125 (59%), Positives = 100/125 (80%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRDDV 189
           RRR+ A++ ++R  G + GR Y ++LEQ +DP+V+L  SMQERA +VPAEVLY SRRD++
Sbjct: 41  RRRFVAEQAVRRTTGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNI 100

Query: 190 HHRVYVHRSEEALLVTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQEEGT 369
           +H+VY HRSEEA+L    Q D  FIQP S+ +LQRSGM+FIH+GV+QVR+QILHR +EGT
Sbjct: 101 NHQVYNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRADEGT 160

Query: 370 LALEI 384
           +AL +
Sbjct: 161 MALVV 165


>gb|AER45339.1| polyprotein, partial [Fig badnavirus 1]
          Length = 198

 Score =  157 bits (397), Expect = 1e-36
 Identities = 74/125 (59%), Positives = 100/125 (80%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRDDV 189
           RRR+ A++ ++R  G + GR Y ++LEQ +DP+V+L  SMQERA +VPAEVLY SRRD++
Sbjct: 41  RRRFVAEQAVRRTTGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNI 100

Query: 190 HHRVYVHRSEEALLVTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQEEGT 369
           +H+VY HRSEEA+L    Q D  FIQP S+ +LQRSGM+FIH+GV+QVR+QILHR +EGT
Sbjct: 101 NHQVYNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRADEGT 160

Query: 370 LALEI 384
           +AL +
Sbjct: 161 MALVV 165


>gb|AFF58911.1| polyprotein, partial [Fig badnavirus 1] gi|381144412|gb|AFF58913.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|381144415|gb|AFF58915.1| polyprotein, partial [Fig
           badnavirus 1] gi|381144418|gb|AFF58917.1| polyprotein,
           partial [Fig badnavirus 1]
          Length = 197

 Score =  157 bits (396), Expect = 2e-36
 Identities = 74/125 (59%), Positives = 100/125 (80%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRDDV 189
           RRR+ A++ ++R  G + GR Y ++LEQ +DP+V+L  SMQERA +VPAEVLY SRRD++
Sbjct: 41  RRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNI 100

Query: 190 HHRVYVHRSEEALLVTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQEEGT 369
           +H+VY HRSEEA+L    Q D  FIQP S+ +LQRSGM+FIH+GV+QVR+QILHR +EGT
Sbjct: 101 NHQVYNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRADEGT 160

Query: 370 LALEI 384
           +AL +
Sbjct: 161 MALVV 165


>gb|AER45335.1| polyprotein, partial [Fig badnavirus 1] gi|354990615|gb|AER45357.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354990618|gb|AER45359.1| polyprotein, partial [Fig
           badnavirus 1] gi|354990630|gb|AER45367.1| polyprotein,
           partial [Fig badnavirus 1] gi|354990636|gb|AER45371.1|
           polyprotein, partial [Fig badnavirus 1]
          Length = 198

 Score =  157 bits (396), Expect = 2e-36
 Identities = 74/125 (59%), Positives = 100/125 (80%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRDDV 189
           RRR+ A++ ++R  G + GR Y ++LEQ +DP+V+L  SMQERA +VPAEVLY SRRD++
Sbjct: 41  RRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNI 100

Query: 190 HHRVYVHRSEEALLVTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQEEGT 369
           +H+VY HRSEEA+L    Q D  FIQP S+ +LQRSGM+FIH+GV+QVR+QILHR +EGT
Sbjct: 101 NHQVYNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRTDEGT 160

Query: 370 LALEI 384
           +AL +
Sbjct: 161 MALVV 165


>gb|AER45329.1| polyprotein, partial [Fig badnavirus 1] gi|354990579|gb|AER45333.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354990594|gb|AER45343.1| polyprotein, partial [Fig
           badnavirus 1] gi|354990597|gb|AER45345.1| polyprotein,
           partial [Fig badnavirus 1] gi|354990600|gb|AER45347.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354990606|gb|AER45351.1| polyprotein, partial [Fig
           badnavirus 1] gi|354990612|gb|AER45355.1| polyprotein,
           partial [Fig badnavirus 1] gi|354990624|gb|AER45363.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354990627|gb|AER45365.1| polyprotein, partial [Fig
           badnavirus 1]
          Length = 198

 Score =  157 bits (396), Expect = 2e-36
 Identities = 74/125 (59%), Positives = 100/125 (80%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRDDV 189
           RRR+ A++ ++R  G + GR Y ++LEQ +DP+V+L  SMQERA +VPAEVLY SRRD++
Sbjct: 41  RRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNI 100

Query: 190 HHRVYVHRSEEALLVTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQEEGT 369
           +H+VY HRSEEA+L    Q D  FIQP S+ +LQRSGM+FIH+GV+QVR+QILHR +EGT
Sbjct: 101 NHQVYNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRADEGT 160

Query: 370 LALEI 384
           +AL +
Sbjct: 161 MALVV 165


>gb|AER45323.1| polyprotein, partial [Fig badnavirus 1] gi|354990567|gb|AER45325.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354990576|gb|AER45331.1| polyprotein, partial [Fig
           badnavirus 1] gi|354990603|gb|AER45349.1| polyprotein,
           partial [Fig badnavirus 1] gi|354990639|gb|AER45373.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354990642|gb|AER45375.1| polyprotein, partial [Fig
           badnavirus 1]
          Length = 198

 Score =  157 bits (396), Expect = 2e-36
 Identities = 74/125 (59%), Positives = 100/125 (80%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRDDV 189
           RRR+ A++ ++R  G + GR Y ++LEQ +DP+V+L  SMQERA +VPAEVLY SRRD++
Sbjct: 41  RRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNI 100

Query: 190 HHRVYVHRSEEALLVTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQEEGT 369
           +H+VY HRSEEA+L    Q D  FIQP S+ +LQRSGM+FIH+GV+QVR+QILHR +EGT
Sbjct: 101 NHQVYNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRADEGT 160

Query: 370 LALEI 384
           +AL +
Sbjct: 161 MALVV 165


>gb|AER42640.1| polyprotein, partial [Fig badnavirus 1] gi|381144400|gb|AFF58905.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|381144403|gb|AFF58907.1| polyprotein, partial [Fig
           badnavirus 1] gi|381144406|gb|AFF58909.1| polyprotein,
           partial [Fig badnavirus 1]
          Length = 197

 Score =  157 bits (396), Expect = 2e-36
 Identities = 74/125 (59%), Positives = 100/125 (80%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRDDV 189
           RRR+ A++ ++R  G + GR Y ++LEQ +DP+V+L  SMQERA +VPAEVLY SRRD++
Sbjct: 41  RRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNI 100

Query: 190 HHRVYVHRSEEALLVTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQEEGT 369
           +H+VY HRSEEA+L    Q D  FIQP S+ +LQRSGM+FIH+GV+QVR+QILHR +EGT
Sbjct: 101 NHQVYNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRADEGT 160

Query: 370 LALEI 384
           +AL +
Sbjct: 161 MALVV 165


>gb|AER42638.1| polyprotein, partial [Fig badnavirus 1] gi|354832288|gb|AER42644.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354832291|gb|AER42646.1| polyprotein, partial [Fig
           badnavirus 1] gi|381144394|gb|AFF58901.1| polyprotein,
           partial [Fig badnavirus 1] gi|381144397|gb|AFF58903.1|
           polyprotein, partial [Fig badnavirus 1]
          Length = 197

 Score =  157 bits (396), Expect = 2e-36
 Identities = 74/125 (59%), Positives = 100/125 (80%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRDDV 189
           RRR+ A++ ++R  G + GR Y ++LEQ +DP+V+L  SMQERA +VPAEVLY SRRD++
Sbjct: 41  RRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNI 100

Query: 190 HHRVYVHRSEEALLVTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQEEGT 369
           +H+VY HRSEEA+L    Q D  FIQP S+ +LQRSGM+FIH+GV+QVR+QILHR +EGT
Sbjct: 101 NHQVYNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRTDEGT 160

Query: 370 LALEI 384
           +AL +
Sbjct: 161 MALVV 165


>gb|AFF58899.1| polyprotein, partial [Fig badnavirus 1]
          Length = 197

 Score =  156 bits (395), Expect = 2e-36
 Identities = 73/125 (58%), Positives = 100/125 (80%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRDDV 189
           RRR+ A++ ++R  G + GR Y ++LEQ +DP+V+L  SMQERA +VPAEVLY SRRD++
Sbjct: 41  RRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNI 100

Query: 190 HHRVYVHRSEEALLVTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQEEGT 369
           +H++Y HRSEEA+L    Q D  FIQP S+ +LQRSGM+FIH+GV+QVR+QILHR +EGT
Sbjct: 101 NHQIYNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRADEGT 160

Query: 370 LALEI 384
           +AL +
Sbjct: 161 MALVV 165


>gb|AER45327.1| polyprotein, partial [Fig badnavirus 1] gi|354990585|gb|AER45337.1|
           polyprotein, partial [Fig badnavirus 1]
          Length = 198

 Score =  156 bits (395), Expect = 2e-36
 Identities = 73/125 (58%), Positives = 100/125 (80%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRDDV 189
           RRR+ A++ ++R  G + GR Y ++LEQ +DP+V+L  SMQERA +VPAEVLY SRRD++
Sbjct: 41  RRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNI 100

Query: 190 HHRVYVHRSEEALLVTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQEEGT 369
           +H++Y HRSEEA+L    Q D  FIQP S+ +LQRSGM+FIH+GV+QVR+QILHR +EGT
Sbjct: 101 NHQIYNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRADEGT 160

Query: 370 LALEI 384
           +AL +
Sbjct: 161 MALVV 165


>gb|AER45353.1| polyprotein, partial [Fig badnavirus 1]
          Length = 198

 Score =  155 bits (392), Expect = 5e-36
 Identities = 73/125 (58%), Positives = 100/125 (80%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRDDV 189
           RRR+ A++ +++  G + GR Y ++LEQ +DP+V+L  SMQERA +VPAEVLY SRRD++
Sbjct: 41  RRRFVAEQAVRQTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNI 100

Query: 190 HHRVYVHRSEEALLVTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQEEGT 369
           +H+VY HRSEEA+L    Q D  FIQP S+ +LQRSGM+FIH+GV+QVR+QILHR +EGT
Sbjct: 101 NHQVYNHRSEEAMLCVGEQQDRMFIQPNSFQELQRSGMQFIHLGVLQVRLQILHRADEGT 160

Query: 370 LALEI 384
           +AL +
Sbjct: 161 MALVV 165


>gb|AER45341.1| polyprotein, partial [Fig badnavirus 1]
          Length = 198

 Score =  155 bits (392), Expect = 5e-36
 Identities = 73/125 (58%), Positives = 100/125 (80%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRTYTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRDDV 189
           RRR+ A++ ++R  G + GR Y ++LEQ +DP+V+L  SMQERA +VPAEVLY SRRD++
Sbjct: 41  RRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLYRSRRDNI 100

Query: 190 HHRVYVHRSEEALLVTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQEEGT 369
           +H+VY HRSEEA+L    Q D  FIQP S+ +L+RSGM+FIH+GV+QVR+QILHR +EGT
Sbjct: 101 NHQVYNHRSEEAMLCVGEQQDRMFIQPNSFQELKRSGMQFIHLGVLQVRLQILHRTDEGT 160

Query: 370 LALEI 384
           +AL +
Sbjct: 161 MALVV 165


>gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]
          Length = 1872

 Score =  154 bits (390), Expect = 9e-36
 Identities = 80/128 (62%), Positives = 100/128 (78%), Gaps = 3/128 (2%)
 Frame = +1

Query: 10  RRRYNAQRTIQRMAGHITGRT--YTRSLEQQMDPQVQLRLSMQERAAIVPAEVLYHSRRD 183
           RR +N ++  +R    +TG    +  +LEQ++DPQV LRLSMQERA +VPAEVLY SRRD
Sbjct: 37  RRLFNLRKKARRAQKALTGSRSRHQETLEQEIDPQVTLRLSMQERARLVPAEVLYRSRRD 96

Query: 184 DVHHRVYVHRSEEALL-VTRNQVDLSFIQPESYAQLQRSGMRFIHMGVIQVRIQILHRQE 360
            VHHRVY HRSEE++L V  NQVD +FIQP S  +LQR+GM FIH+G++QVRIQILHRQE
Sbjct: 97  TVHHRVYTHRSEESILCVGGNQVDRTFIQPSSLERLQRTGMSFIHIGILQVRIQILHRQE 156

Query: 361 EGTLALEI 384
           EGT+AL +
Sbjct: 157 EGTMALVV 164