BLASTX nr result

ID: Zingiber25_contig00046611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00046611
         (446 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW12450.1| hypothetical protein PHAVU_008G113800g [Phaseolus...    58   1e-06
ref|XP_006602616.1| PREDICTED: rop guanine nucleotide exchange f...    55   7e-06

>gb|ESW12450.1| hypothetical protein PHAVU_008G113800g [Phaseolus vulgaris]
          Length = 702

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 41/105 (39%), Positives = 49/105 (46%)
 Frame = +1

Query: 130 QAGREEGPRGSTLESPTPTTMHP**CNEDPQSFSPSSALLIQHCPSMEDAESKCGEAFSC 309
           + GRE       L S T    H     ED  S  PS    IQ     E A S C      
Sbjct: 132 EKGRESSFSSDFLSSETTHEEHSRSSTEDSSS-PPSVGWTIQ-----ELAASDCASPHGS 185

Query: 310 STGDERSANCSSFESKPMKGGGSEIELMKERLSKLLLGEDMSGCG 444
             G+++ +   + E K      SEIE+MKER +KLLLGEDMSGCG
Sbjct: 186 EDGEKKHSVLENKEFKKQVSVSSEIEMMKERFAKLLLGEDMSGCG 230


>ref|XP_006602616.1| PREDICTED: rop guanine nucleotide exchange factor 7-like isoform X1
           [Glycine max] gi|571547203|ref|XP_006602617.1|
           PREDICTED: rop guanine nucleotide exchange factor 7-like
           isoform X2 [Glycine max]
           gi|571547207|ref|XP_006602618.1| PREDICTED: rop guanine
           nucleotide exchange factor 7-like isoform X3 [Glycine
           max]
          Length = 613

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 39/105 (37%), Positives = 48/105 (45%)
 Frame = +1

Query: 130 QAGREEGPRGSTLESPTPTTMHP**CNEDPQSFSPSSALLIQHCPSMEDAESKCGEAFSC 309
           + GRE       L S T    H     ED  S SPS    +Q     E A S C      
Sbjct: 36  EKGRESSFSSEFLSSETTHEEHSRSSTEDSSS-SPSVGWPVQ-----EIAASDCASPHGS 89

Query: 310 STGDERSANCSSFESKPMKGGGSEIELMKERLSKLLLGEDMSGCG 444
             G+++     + E +       EIE+MKER +KLLLGEDMSGCG
Sbjct: 90  EDGEKKHLVLENKEFEKRVSASPEIEMMKERFAKLLLGEDMSGCG 134


Top