BLASTX nr result
ID: Zingiber25_contig00046285
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00046285
(367 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY05174.1| ARM repeat superfamily protein, putative [Theobro... 82 1e-13
ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255... 79 5e-13
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 79 5e-13
ref|XP_006360968.1| PREDICTED: small subunit processome componen... 74 2e-11
ref|XP_004247966.1| PREDICTED: small subunit processome componen... 73 4e-11
ref|XP_004969406.1| PREDICTED: small subunit processome componen... 72 8e-11
ref|XP_006489856.1| PREDICTED: small subunit processome componen... 72 1e-10
ref|XP_006489855.1| PREDICTED: small subunit processome componen... 72 1e-10
ref|XP_006489854.1| PREDICTED: small subunit processome componen... 72 1e-10
ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citr... 69 5e-10
tpg|DAA53119.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea m... 68 1e-09
ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Popu... 66 5e-09
gb|EMS50081.1| Small subunit processome component 20-like protei... 64 2e-08
ref|XP_006415986.1| hypothetical protein EUTSA_v10009353mg [Eutr... 63 4e-08
gb|EMT18035.1| Small subunit processome component 20-like protei... 62 1e-07
ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subuni... 60 3e-07
ref|XP_004139015.1| PREDICTED: small subunit processome componen... 60 3e-07
gb|EMJ16091.1| hypothetical protein PRUPE_ppa000015mg [Prunus pe... 59 5e-07
ref|XP_006839008.1| hypothetical protein AMTR_s00002p00271990 [A... 58 1e-06
gb|EMJ17348.1| hypothetical protein PRUPE_ppa015122mg [Prunus pe... 57 3e-06
>gb|EOY05174.1| ARM repeat superfamily protein, putative [Theobroma cacao]
Length = 2725
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/95 (40%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAKQ 141
+ P F+L +SSL FL EL+LK+P ++ +FR HILSAM+DL+E S EE + L+L+FF +
Sbjct: 408 WTPVFELGNSSLLTFLRELLLKDPSVIYIFRDHILSAMNDLVESSSEEVICLLLSFFERL 467
Query: 140 SKY--ENCYIVEVSEDKVHMLCNFLREKIVYWIKL 42
+ + ++ +SE ++ +C +++ I WI+L
Sbjct: 468 QMHPQSSNFLDGISEGRLAKICYYMQGVISNWIRL 502
>ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera]
Length = 3196
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAK- 144
+ PAF+L + SL F+ L+ K+P +V FR +ILSAM+ LIE SPEE + LML F +
Sbjct: 181 WAPAFELRNPSLLNFIKSLLSKDPYMVYTFRINILSAMNSLIETSPEEVIFLMLMFNERL 240
Query: 143 -QSKYENCYIVEVSEDKVHMLCNFLREKIVYW 51
+ ++VE SE+ V +C+FL+E ++YW
Sbjct: 241 QVDMQSSSFLVEASEEGVSRICSFLQEALLYW 272
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAK- 144
+ PAF+L + SL F+ L+ K+P +V FR +ILSAM+ LIE SPEE + LML F +
Sbjct: 410 WAPAFELRNPSLLNFIKSLLSKDPYMVYTFRINILSAMNSLIETSPEEVIFLMLMFNERL 469
Query: 143 -QSKYENCYIVEVSEDKVHMLCNFLREKIVYW 51
+ ++VE SE+ V +C+FL+E ++YW
Sbjct: 470 QVDMQSSSFLVEASEEGVSRICSFLQEALLYW 501
>ref|XP_006360968.1| PREDICTED: small subunit processome component 20 homolog [Solanum
tuberosum]
Length = 1461
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/92 (39%), Positives = 59/92 (64%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAKQ 141
+ P F L + SL F+++L+LK+P IV FR+ I+SA++D+IE S EE + L+ FF +
Sbjct: 410 WAPVFDLRNKSLLSFVEDLLLKDPCIVHFFRASIISALNDMIEISEEEVIHLLQIFFKRL 469
Query: 140 SKYENCYIVEVSEDKVHMLCNFLREKIVYWIK 45
+ ++ EV +K+ + +FLRE I WI+
Sbjct: 470 PAQGHSFLDEVPNEKLSRIRSFLREAIGRWIR 501
>ref|XP_004247966.1| PREDICTED: small subunit processome component 20 homolog [Solanum
lycopersicum]
Length = 2660
Score = 72.8 bits (177), Expect = 4e-11
Identities = 36/91 (39%), Positives = 58/91 (63%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAKQ 141
+ P F L + SL F+++L+LK+P IV FR+ I+SA++D+IE S EE + L+ FF +
Sbjct: 397 WAPVFDLRNKSLLSFVEDLLLKDPCIVHFFRASIISALNDMIEISEEEVIHLLQIFFKRL 456
Query: 140 SKYENCYIVEVSEDKVHMLCNFLREKIVYWI 48
+ ++ EV +K+ + +FLRE I WI
Sbjct: 457 PAQGHSFLDEVPNEKLSRIHSFLREGIGRWI 487
>ref|XP_004969406.1| PREDICTED: small subunit processome component 20 homolog [Setaria
italica]
Length = 2708
Score = 72.0 bits (175), Expect = 8e-11
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAKQ 141
YVP F+L + S+ F+ +L+ K PQI Q F S ILSAM + + SPEE L ++L FF
Sbjct: 406 YVPVFELTNLSVIVFIKKLLAKGPQITQYFESQILSAMCNFLSSSPEEVLFILLNFFKGS 465
Query: 140 SKYENCYIVEVSE-DKVHMLCNFLREKIVYWIK-LFGTAESNNQFYKQ 3
K + + + D V +C F K +WI+ L T +NQ Q
Sbjct: 466 QKQIILHSTDANHLDSVEKVCKFCESKFSFWIEFLDDTVNISNQSSNQ 513
>ref|XP_006489856.1| PREDICTED: small subunit processome component 20 homolog isoform X3
[Citrus sinensis]
Length = 2306
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/95 (38%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAKQ 141
+ PAF+L +SSL F+ +L+ +P +V FR +ILSA++D+IE+S +E + L+L+FF K
Sbjct: 11 WAPAFELKNSSLLKFIGKLLQLDPCVVYTFRVNILSAINDMIENSQDEVICLLLSFFDKL 70
Query: 140 SKYENC--YIVEVSEDKVHMLCNFLREKIVYWIKL 42
C ++ VSE +V + FL+E + WI +
Sbjct: 71 QMEPECCNFLDGVSEGRVLRIRGFLQEAVCSWISV 105
>ref|XP_006489855.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Citrus sinensis]
Length = 2702
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/95 (38%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAKQ 141
+ PAF+L +SSL F+ +L+ +P +V FR +ILSA++D+IE+S +E + L+L+FF K
Sbjct: 408 WAPAFELKNSSLLKFIGKLLQLDPCVVYTFRVNILSAINDMIENSQDEVICLLLSFFDKL 467
Query: 140 SKYENC--YIVEVSEDKVHMLCNFLREKIVYWIKL 42
C ++ VSE +V + FL+E + WI +
Sbjct: 468 QMEPECCNFLDGVSEGRVLRIRGFLQEAVCSWISV 502
>ref|XP_006489854.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Citrus sinensis]
Length = 2703
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/95 (38%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAKQ 141
+ PAF+L +SSL F+ +L+ +P +V FR +ILSA++D+IE+S +E + L+L+FF K
Sbjct: 408 WAPAFELKNSSLLKFIGKLLQLDPCVVYTFRVNILSAINDMIENSQDEVICLLLSFFDKL 467
Query: 140 SKYENC--YIVEVSEDKVHMLCNFLREKIVYWIKL 42
C ++ VSE +V + FL+E + WI +
Sbjct: 468 QMEPECCNFLDGVSEGRVLRIRGFLQEAVCSWISV 502
>ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citrus clementina]
gi|557522881|gb|ESR34248.1| hypothetical protein
CICLE_v10004117mg [Citrus clementina]
Length = 2651
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAKQ 141
+ PAF+L +SS F+ +L+ +P +V FR +ILSA++D+IE+S +E + L+L+FF K
Sbjct: 408 WAPAFELKNSSSLKFIGKLLQLDPCVVYTFRVNILSAINDMIENSQDEVICLLLSFFDKL 467
Query: 140 SKYENC--YIVEVSEDKVHMLCNFLREKIVYWIKL 42
C ++ VSE +V + FL+E + WI +
Sbjct: 468 QMEPECCNFLDGVSEGRVLRIRGFLQEAVCSWISV 502
>tpg|DAA53119.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea mays]
Length = 2530
Score = 68.2 bits (165), Expect = 1e-09
Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAKQ 141
Y P FKL + + F+ +L++K PQ+ Q F S ILSAMD+ I SPE+ + ++L FF K
Sbjct: 355 YAPVFKLKNPRVIVFIKKLLVKGPQVAQHFESQILSAMDNFIVSSPEDVIFILLNFF-KG 413
Query: 140 SKYE--NCYIVEVSEDKVHMLCNFLREKIVYWIKLF-GTAESNNQFYKQ 3
SK + C D V C F K WI+L TA + N+ Q
Sbjct: 414 SKKQIFLCSTDGNHLDSVEKTCKFFESKFSLWIELLDDTAGTGNRSSNQ 462
>ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Populus trichocarpa]
gi|550348719|gb|ERP66384.1| hypothetical protein
POPTR_0001s32620g [Populus trichocarpa]
Length = 2597
Score = 65.9 bits (159), Expect = 5e-09
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAK- 144
+ PAFKL +SS+ F EL+ ++P I+ FR++ILSAM+DLIE S +E + L+LTF K
Sbjct: 300 WAPAFKLRNSSILTFSSELMKRDPCILYEFRANILSAMNDLIETSQKEIVFLLLTFCEKL 359
Query: 143 -QSKYENCYIVEVSEDKVHMLCNFLREKIVYWIKLFGTAESNN 18
+ ++ E + + FL++ + +W+ + + N
Sbjct: 360 QMDPLRSIFLDGSPEGRYSRITGFLQQTVRFWLAVIDNIVNGN 402
>gb|EMS50081.1| Small subunit processome component 20-like protein [Triticum
urartu]
Length = 2665
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAKQ 141
Y P F+L + S FL +L +K PQI++ F S ILSAMD+++E SPEE L ++L F K
Sbjct: 394 YAPVFELTNLSAVAFLKKLCMKGPQIIKAFESQILSAMDNILETSPEEVLFILLHLFKKA 453
Query: 140 SKYENCYIVEVS----EDKVHMLCNFLREKIVYWIKL 42
+ + ++ S E KV+ C+ + WI++
Sbjct: 454 TDGVTPHDIDGSHLDREKKVYKFCD---SNVRLWIEV 487
>ref|XP_006415986.1| hypothetical protein EUTSA_v10009353mg [Eutrema salsugineum]
gi|557093757|gb|ESQ34339.1| hypothetical protein
EUTSA_v10009353mg [Eutrema salsugineum]
Length = 2542
Score = 63.2 bits (152), Expect = 4e-08
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAK- 144
+ P F L SSSL FL EL+ K+ IV+ F SHIL +++++I SPEE L+L++ K
Sbjct: 393 WAPIFSLKSSSLLIFLRELLEKDRLIVKAFSSHILRSINNMIFGSPEEVFPLLLSYCKKQ 452
Query: 143 QSKYENCYIVEVSEDKVHMLCNFLREKI 60
Q+ ++ I++ S +++H FL EKI
Sbjct: 453 QTSHDRVNIIDESFERIH---EFLEEKI 477
>gb|EMT18035.1| Small subunit processome component 20-like protein [Aegilops
tauschii]
Length = 2673
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/92 (35%), Positives = 50/92 (54%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAKQ 141
Y P F+L + S F+ +L +K PQI++ F S ILSAMD+++E SPEE L ++L F K
Sbjct: 404 YAPVFELTNLSAVAFMKKLCMKGPQIIKAFESQILSAMDNILETSPEEVLFILLHLFKKA 463
Query: 140 SKYENCYIVEVSEDKVHMLCNFLREKIVYWIK 45
+ I D+ + F + WI+
Sbjct: 464 TDGVTHDIDGSHLDREKKVYKFCDSNVRLWIE 495
>ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component
20 homolog, partial [Cucumis sativus]
Length = 2538
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/92 (33%), Positives = 58/92 (63%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAKQ 141
+ P F+LN+SSL F+ E++ K+ ++ FR++IL M++ +E SPEE + L+L+F
Sbjct: 294 WAPIFQLNNSSLLTFVREVMEKDTSVLCAFRTNILRVMNESLESSPEEVIYLLLSF---- 349
Query: 140 SKYENCYIVEVSEDKVHMLCNFLREKIVYWIK 45
S+ ++ SE+++ + NF+ + + WIK
Sbjct: 350 SERLPTEVLGTSEEEIPKINNFILKILRQWIK 381
>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
sativus]
Length = 2696
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/92 (33%), Positives = 58/92 (63%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAKQ 141
+ P F+LN+SSL F+ E++ K+ ++ FR++IL M++ +E SPEE + L+L+F
Sbjct: 426 WAPIFQLNNSSLLTFVREVMEKDTSVLCAFRTNILRVMNESLESSPEEVIYLLLSF---- 481
Query: 140 SKYENCYIVEVSEDKVHMLCNFLREKIVYWIK 45
S+ ++ SE+++ + NF+ + + WIK
Sbjct: 482 SERLPTEVLGTSEEEIPKINNFILKILRQWIK 513
>gb|EMJ16091.1| hypothetical protein PRUPE_ppa000015mg [Prunus persica]
Length = 2663
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/92 (34%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAK- 144
+ P F L +SSL F+ +L+ K+ ++ +FR +IL AM+DLIE S E+ + L+LTF K
Sbjct: 410 WAPVFDLKNSSLLGFIRQLLQKDVCVLDIFRVNILRAMNDLIETSQEDVIYLLLTFNEKL 469
Query: 143 QSKYENCYIVEVSEDKVHMLCNFLREKIVYWI 48
Q + ++ ++ + + V + F+R I W+
Sbjct: 470 QMETQSLTFLDRTREGVPRIQGFMRGAISNWV 501
>ref|XP_006839008.1| hypothetical protein AMTR_s00002p00271990 [Amborella trichopoda]
gi|548841514|gb|ERN01577.1| hypothetical protein
AMTR_s00002p00271990 [Amborella trichopoda]
Length = 2766
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = -3
Query: 308 FKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAK 144
F++ SS L FL E+ILK+ I+ R+HI+ M++LIEDSP E L LMLTF K
Sbjct: 447 FQIRSSCLLSFLREIILKDASILVALRNHIMRGMNELIEDSPGEVLHLMLTFSEK 501
>gb|EMJ17348.1| hypothetical protein PRUPE_ppa015122mg [Prunus persica]
Length = 2641
Score = 56.6 bits (135), Expect = 3e-06
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = -3
Query: 320 YVPAFKLNSSSLCPFLDELILKEPQIVQVFRSHILSAMDDLIEDSPEETLSLMLTFFAK- 144
+ P F L +SSL F+ +L+ K+ I+ +F +IL AM+DL+E S E+ + L+LTF K
Sbjct: 402 WAPVFDLKNSSLLGFIRQLLQKDVCILDIFAVNILRAMNDLLETSQEDVIYLLLTFNEKL 461
Query: 143 QSKYENCYIVEVSEDKVHMLCNFLREKIVYWI 48
Q + ++ ++ + + V + F+R I W+
Sbjct: 462 QMETQSLTFLDRTREGVPRIQGFMRGAISNWV 493