BLASTX nr result

ID: Zingiber25_contig00046255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00046255
         (279 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX95734.1| Poly(A) RNA polymerase cid14, putative [Theobroma...    61   1e-07
emb|CBI40504.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002277075.1| PREDICTED: uncharacterized protein LOC100241...    60   2e-07
emb|CAN67650.1| hypothetical protein VITISV_005081 [Vitis vinifera]    60   2e-07
ref|XP_002322022.2| hypothetical protein POPTR_0015s02200g [Popu...    59   7e-07
ref|XP_004248454.1| PREDICTED: uncharacterized protein LOC101252...    57   2e-06
ref|XP_006362144.1| PREDICTED: uncharacterized protein LOC102604...    57   3e-06
ref|XP_006362143.1| PREDICTED: uncharacterized protein LOC102604...    57   3e-06

>gb|EOX95734.1| Poly(A) RNA polymerase cid14, putative [Theobroma cacao]
          Length = 1347

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
 Frame = +3

Query: 3   GKLHFVRTRSSPNLTETCLDL-SRARHSRAMETLKVQSQVKFDSGISRKNMGSEMTSSHN 179
           G+  F RTRSSP LTET  ++ SR R +R  E+ K            RKNM S+MT+S+N
Sbjct: 500 GRYLFARTRSSPELTETYGEVASRGRRNRVPESGKTHIASMRSDNNGRKNMESDMTASNN 559

Query: 180 SK-SFDDYTSKWQIASHKNFDMAFDTNNVSNSHQ 278
            K S DD +S    ++H++ D   D N++ NS+Q
Sbjct: 560 IKSSCDDPSSIRHTSTHQSIDATADPNSLLNSYQ 593


>emb|CBI40504.3| unnamed protein product [Vitis vinifera]
          Length = 1229

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   GKLHFVRTRSSPNLTETCLD-LSRARHSRAMETLKVQ-SQVKFDSGISRKNMGSEMTSSH 176
           G+  F RT SSP LT+T     SR RH+RA E  K Q +  + D+   RKN+GSE+  S+
Sbjct: 493 GRYLFARTHSSPELTDTYTKGSSRGRHNRAPENGKDQITSTRLDNS-RRKNLGSEIFVSN 551

Query: 177 NSKSFDDYTSKWQIASHKNFDMAFDTNNVSNSH 275
           ++ S DD +S   ++SH++ D + D+N   NS+
Sbjct: 552 STISTDDTSSVRHVSSHQSLDGSADSNTTLNSY 584


>ref|XP_002277075.1| PREDICTED: uncharacterized protein LOC100241322 [Vitis vinifera]
          Length = 1295

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   GKLHFVRTRSSPNLTETCLD-LSRARHSRAMETLKVQ-SQVKFDSGISRKNMGSEMTSSH 176
           G+  F RT SSP LT+T     SR RH+RA E  K Q +  + D+   RKN+GSE+  S+
Sbjct: 493 GRYLFARTHSSPELTDTYTKGSSRGRHNRAPENGKDQITSTRLDNS-RRKNLGSEIFVSN 551

Query: 177 NSKSFDDYTSKWQIASHKNFDMAFDTNNVSNSH 275
           ++ S DD +S   ++SH++ D + D+N   NS+
Sbjct: 552 STISTDDTSSVRHVSSHQSLDGSADSNTTLNSY 584


>emb|CAN67650.1| hypothetical protein VITISV_005081 [Vitis vinifera]
          Length = 1572

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   GKLHFVRTRSSPNLTETCLD-LSRARHSRAMETLKVQ-SQVKFDSGISRKNMGSEMTSSH 176
           G+  F RT SSP LT+T     SR RH+RA E  K Q +  + D+   RKN+GSE+  S+
Sbjct: 616 GRYLFARTHSSPELTDTYTKGSSRGRHNRAPENGKDQITSTRLDNS-RRKNLGSEIFVSN 674

Query: 177 NSKSFDDYTSKWQIASHKNFDMAFDTNNVSNSH 275
           ++ S DD +S   ++SH++ D + D+N   NS+
Sbjct: 675 STISTDDTSSVRHVSSHQSLDGSADSNTTLNSY 707


>ref|XP_002322022.2| hypothetical protein POPTR_0015s02200g [Populus trichocarpa]
           gi|550321796|gb|EEF06149.2| hypothetical protein
           POPTR_0015s02200g [Populus trichocarpa]
          Length = 1357

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
 Frame = +3

Query: 6   KLHFVRTRSSPNLTETCLD-LSRARHSRAMETLKVQSQVKFDSGISRKNMGSEMTSSHNS 182
           +  F RT+SSP LT+T  + LSR RH+RA ET+  Q+         R+N+  E+  +H +
Sbjct: 508 RYQFARTQSSPELTDTSSEVLSRGRHNRASETVNGQTAPARSHNSRRRNLVPEVLENHGA 567

Query: 183 K-SFDDYTSKWQIASHKNFDMAFDTNNVSNSH 275
           + S +D  S     SH++ D A D+ + SNS+
Sbjct: 568 RFSTEDSLSSRHSLSHQSIDAAVDSTSASNSY 599


>ref|XP_004248454.1| PREDICTED: uncharacterized protein LOC101252826 [Solanum
           lycopersicum]
          Length = 1348

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
 Frame = +3

Query: 3   GKLHFVRTRSSPNLTETCLDL-SRARHSRAMETLKVQ-SQVKFDSGISRKNMGSEMTSSH 176
           GK  F RTRSSP LT+T  ++ S+ +H    ET K+Q + ++ D    RKN GSE  +S 
Sbjct: 499 GKFVFARTRSSPELTDTYGEVTSQGKHGNTPETAKMQPTPLRQDGRNWRKNQGSENLASQ 558

Query: 177 NSKSF-DDYTSKWQIASHKNFDMAFDTNNVSNS 272
           + +S  +D +S     SH++ D   D+N+ SNS
Sbjct: 559 SGRSLNNDASSIRHFPSHQSLDAVADSNSRSNS 591


>ref|XP_006362144.1| PREDICTED: uncharacterized protein LOC102604253 isoform X2 [Solanum
           tuberosum]
          Length = 1347

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
 Frame = +3

Query: 3   GKLHFVRTRSSPNLTETCLDL-SRARHSRAMETLKVQ-SQVKFDSGISRKNMGSEMTSSH 176
           GK  F RTRSSP LT+T  ++ S+ +H    ET K+Q + ++ D    RKN GSE  +S 
Sbjct: 499 GKFVFSRTRSSPELTDTYGEVTSQGKHGNTPETAKMQPTPLRQDGRNWRKNQGSENLASQ 558

Query: 177 NSKSF-DDYTSKWQIASHKNFDMAFDTNNVSNS 272
           + +S  +D +S     SH++ D   D+N+ SNS
Sbjct: 559 SGRSLNNDASSIRHFPSHQSLDAVADSNSRSNS 591


>ref|XP_006362143.1| PREDICTED: uncharacterized protein LOC102604253 isoform X1 [Solanum
           tuberosum]
          Length = 1348

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
 Frame = +3

Query: 3   GKLHFVRTRSSPNLTETCLDL-SRARHSRAMETLKVQ-SQVKFDSGISRKNMGSEMTSSH 176
           GK  F RTRSSP LT+T  ++ S+ +H    ET K+Q + ++ D    RKN GSE  +S 
Sbjct: 499 GKFVFSRTRSSPELTDTYGEVTSQGKHGNTPETAKMQPTPLRQDGRNWRKNQGSENLASQ 558

Query: 177 NSKSF-DDYTSKWQIASHKNFDMAFDTNNVSNS 272
           + +S  +D +S     SH++ D   D+N+ SNS
Sbjct: 559 SGRSLNNDASSIRHFPSHQSLDAVADSNSRSNS 591


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