BLASTX nr result
ID: Zingiber25_contig00045929
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00045929
(397 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|... 157 1e-36
gb|ACH86211.1| unknown [Citrus yellow mosaic virus] 105 8e-21
gb|AER00544.1| ORF III [Citrus yellow mosaic virus] 103 2e-20
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 103 2e-20
ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus] gi|16... 103 2e-20
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 103 3e-20
gb|ABU93491.1| polyprotein [Citrus yellow mosaic virus] 103 3e-20
gb|AER00538.1| ORF III [Citrus yellow mosaic virus] 102 5e-20
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 100 2e-19
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 100 2e-19
gb|ABU93490.1| polyprotein [Citrus yellow mosaic virus] 100 2e-19
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 99 4e-19
emb|CAE81279.1| polyprotein [Cacao swollen shoot virus] 98 1e-18
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|54035746... 97 2e-18
emb|CAE81285.1| polyprotein [Cacao swollen shoot virus] 96 5e-18
gb|AFM82591.1| polyprotein [Cacao swollen shoot virus] 96 6e-18
emb|CAE76628.1| polyprotein [Cacao swollen shoot virus] 95 8e-18
ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|3478... 92 5e-17
emb|CAD59232.1| polyprotein [Cacao swollen shoot virus] 89 6e-16
emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao s... 88 1e-15
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|gb|AEF56561.1|
polyprotein [Fig badnavirus 1]
Length = 1837
Score = 157 bits (398), Expect = 1e-36
Identities = 73/134 (54%), Positives = 104/134 (77%), Gaps = 2/134 (1%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEE-TNDLQRSIQTLILSGNIFMLGQIDGGYRPQIKVTDQ 221
+I+SV+EGE++SDAIY+ISEGE+ ++LQ+S+QTL + + MLG+IDGGYRPQIK+ ++
Sbjct: 851 DIVSVEEGEDMSDAIYSISEGEDGADELQKSLQTLEI---VLMLGEIDGGYRPQIKLPEE 907
Query: 220 QYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYFGQKVPIL 41
Q C H WI NGD + + + C+ C+R++ KRARIHC CL+TACNLCGPYY +VP+
Sbjct: 908 QMNCVHNWIHNGDIFVQRAVHCSFCRRESIKRARIHCPLCLLTACNLCGPYYLKIEVPVE 967
Query: 40 PS-STPFFPNKLLQ 2
P+ STP P +++Q
Sbjct: 968 PAPSTPINPRRIIQ 981
>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
Length = 1490
Score = 105 bits (261), Expect = 8e-21
Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGN-IFMLGQIDGGYRPQIKVTDQ 221
EI+S+ EGE SDAI++ISEGEET ++ N + LG+ GGY+ ++++ +
Sbjct: 473 EIVSIDEGEPDSDAIFSISEGEETGAIEEQCFVFQEECNGTYWLGK-RGGYQDLVQISKE 531
Query: 220 QYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYFGQKVPIL 41
Y C H+W N P ++C C+R+T +RAR+HC C IT+C +CGP YF +K+ +
Sbjct: 532 IYYCQHEWEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQ 591
Query: 40 P-SSTPFFPNKLLQ 2
P PF LLQ
Sbjct: 592 PMPQAPFNQKGLLQ 605
>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
Length = 1976
Score = 103 bits (258), Expect = 2e-20
Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGN-IFMLGQIDGGYRPQIKVTDQ 221
EI+S+ EG+ SDAI++ISEGEET + N + LG+ GGY+ ++++ +
Sbjct: 957 EIVSIDEGDPDSDAIFSISEGEETGAFEEQCFVFQEECNGTYWLGK-RGGYQDLVQISKE 1015
Query: 220 QYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYFGQKVPIL 41
Y C H+W N P ++C C+R+T +RAR+HC C IT+C +CGP YF +K+ +
Sbjct: 1016 TYYCQHEWEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQ 1075
Query: 40 P-SSTPFFPNKLLQ 2
P PF LLQ
Sbjct: 1076 PIPQAPFNQKGLLQ 1089
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 103 bits (257), Expect = 2e-20
Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGN-IFMLGQIDGGYRPQIKVTDQ 221
EI+S+ EG+ SDAI++ISEGEE L+ N + LG+ GGY+ ++++ +
Sbjct: 950 EIVSIDEGDPDSDAIFSISEGEEAGTLEEQCFVFQEECNGTYWLGK-RGGYQDLVQISKE 1008
Query: 220 QYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYFGQKVPIL 41
Y C H+W N P ++C C+R+T +RAR+HC C IT+C +CGP YF +K+ +
Sbjct: 1009 IYYCQHEWEENQPINDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQ 1068
Query: 40 P-SSTPFFPNKLLQ 2
P PF LLQ
Sbjct: 1069 PIPQAPFNQKGLLQ 1082
>ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus]
gi|16416939|gb|AAL18495.1|AF347695_3 unknown [citrus
yellow mosaic virus]
Length = 1983
Score = 103 bits (257), Expect = 2e-20
Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGN-IFMLGQIDGGYRPQIKVTDQ 221
EI+S+ EG+ SDAI++ISEGEE L+ N + LG+ GGY+ ++++ +
Sbjct: 965 EIVSIDEGDPDSDAIFSISEGEEAGTLEEQCFVFQEECNGTYWLGK-RGGYQDLVQISKE 1023
Query: 220 QYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYFGQKVPIL 41
Y C H+W N P ++C C+R+T +RAR+HC C IT+C +CGP YF +K+ +
Sbjct: 1024 IYYCQHEWEENQPINDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQ 1083
Query: 40 P-SSTPFFPNKLLQ 2
P PF LLQ
Sbjct: 1084 PMPQAPFNQKGLLQ 1097
>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
Length = 1976
Score = 103 bits (256), Expect = 3e-20
Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGN-IFMLGQIDGGYRPQIKVTDQ 221
EI+S+ EG+ SDAI++ISEGEET + N + LG+ GGY+ ++++ +
Sbjct: 957 EIVSIDEGDPDSDAIFSISEGEETGAFEEQCFVFQEECNGTYWLGK-RGGYQDLVQISKE 1015
Query: 220 QYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYFGQKVPIL 41
Y C H+W N P ++C C+R+T +RAR+HC C IT+C +CGP YF +K+ +
Sbjct: 1016 IYYCQHEWEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNRKITVQ 1075
Query: 40 P-SSTPFFPNKLLQ 2
P PF LLQ
Sbjct: 1076 PIPQAPFNQKGLLQ 1089
>gb|ABU93491.1| polyprotein [Citrus yellow mosaic virus]
Length = 284
Score = 103 bits (256), Expect = 3e-20
Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGN-IFMLGQIDGGYRPQIKVTDQ 221
EI+S+ EG+ SDAI++ISEGEET + N + LG+ GGY+ ++++ +
Sbjct: 37 EIVSIDEGDPDSDAIFSISEGEETGAFEEQCFVFQEECNGTYWLGK-RGGYQDLVQISKE 95
Query: 220 QYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYFGQKVPIL 41
Y C H+W N P ++C C+R+T +RAR+HC C IT+C +CGP YF +K+ +
Sbjct: 96 IYYCQHEWEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNRKITVQ 155
Query: 40 P-SSTPFFPNKLLQ 2
P PF LLQ
Sbjct: 156 PIPQAPFNQKGLLQ 169
>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
Length = 1982
Score = 102 bits (254), Expect = 5e-20
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGN-IFMLGQIDGGYRPQIKVTDQ 221
EI+S+ EG+ SDAI++ISEGEE L+ N + LG+ GGY+ ++++ +
Sbjct: 964 EIVSIDEGDPDSDAIFSISEGEEAGTLEEQCFVFQEECNGTYWLGK-RGGYQDLVQISKE 1022
Query: 220 QYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYFGQKVPIL 41
Y C H+W N P ++C C+R+T +RAR+HC C IT+C +CGP YF +++ +
Sbjct: 1023 IYYCQHEWEENQPINDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKRITVQ 1082
Query: 40 P-SSTPFFPNKLLQ 2
P PF LLQ
Sbjct: 1083 PMPQAPFNQKGLLQ 1096
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 100 bits (249), Expect = 2e-19
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGN-IFMLGQIDGGYRPQIKVTDQ 221
EI+S+ EG+ SDAI++ISEGEET ++ N + LG+ GGY+ ++++ +
Sbjct: 949 EIVSIDEGDPDSDAIFSISEGEETGAIEEQCFVFQEECNGTYWLGK-RGGYQDLVQISKE 1007
Query: 220 QYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYFGQKVPIL 41
Y C H+W N ++C C+R+T +RAR+HC C IT+C +CGP YF +K+ +
Sbjct: 1008 IYYCQHEWEENQPIDDSAYVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQ 1067
Query: 40 P-SSTPFFPNKLLQ 2
P PF LLQ
Sbjct: 1068 PIPQAPFNQKGLLQ 1081
>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
Length = 1979
Score = 100 bits (249), Expect = 2e-19
Identities = 55/136 (40%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGN-IFMLGQIDGGYRP--QIKVT 227
EI+S+ EG+ SDAI++ISEGEET + N + LG+ GGY+ QI ++
Sbjct: 957 EIVSIDEGDPDSDAIFSISEGEETGAFEEQCFVFQEECNGTYWLGK-RGGYQDLVQIPIS 1015
Query: 226 DQQYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYFGQKVP 47
+ Y C H+W N P ++C C+R+T +RAR+HC C IT+C +CGP YF +K+
Sbjct: 1016 KEIYYCQHEWEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKIT 1075
Query: 46 ILP-SSTPFFPNKLLQ 2
+ P PF LLQ
Sbjct: 1076 VQPIPQAPFNQKGLLQ 1091
>gb|ABU93490.1| polyprotein [Citrus yellow mosaic virus]
Length = 284
Score = 100 bits (249), Expect = 2e-19
Identities = 53/135 (39%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGN-IFMLGQIDGGYRPQIKVTDQ 221
EI+S+ EG+ SDAI++ISEGEET + N + LG+ GGY+ ++++ +
Sbjct: 37 EIVSIDEGDPDSDAIFSISEGEETGAFEEQCFVFQEECNGTYWLGK-RGGYQDLVQISKE 95
Query: 220 QYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYFGQKVPI- 44
Y C H+W N P ++C C+R+T +RAR+HC C IT+C +CGP YF +K+ +
Sbjct: 96 IYYCQHEWEENQPIDDPAHVRCYPCKRETTQRARLHCKLCHITSCLMCGPTYFNKKITVQ 155
Query: 43 -LPSSTPFFPNKLLQ 2
+P + PF LLQ
Sbjct: 156 QIPQA-PFNQKGLLQ 169
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
bacilliform virus GD1]
Length = 1892
Score = 99.4 bits (246), Expect = 4e-19
Identities = 50/138 (36%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRS---IQTLIL----SGNIFMLGQIDGGYRPQ 239
E++SV+EGE +SDAI++ISE E+ + L +T+ + + N++ G+ DG Y P
Sbjct: 874 EVVSVEEGEEVSDAIFSISENEDEDALHTGGAFAETIFMFHEGTDNVYWAGKKDG-YLPY 932
Query: 238 IKVTDQQYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYFG 59
++T +Q++C H+W N + + KC+ C+++T++R R+HC C IT+C LC Y G
Sbjct: 933 KRITREQFQCEHEWQMNQEVATVELEKCSFCKQETRRRMRLHCPKCRITSCVLCSSNYCG 992
Query: 58 QKVPILPSSTPFFPNKLL 5
+ P T FF K L
Sbjct: 993 IAIKPEPVQTSFFNEKSL 1010
>emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]
Length = 1816
Score = 97.8 bits (242), Expect = 1e-18
Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGNIFMLGQIDGGY--------RP 242
+I+SV+EGE+ SDAIY+ISE E +L + + +FM+ + D Y
Sbjct: 828 DIVSVEEGEDDSDAIYSISENENGEELDAEV----VQEKVFMMREEDQSYWLGKTNHWTA 883
Query: 241 QIKVTDQQYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYF 62
++V+ QQY C HQW N + I C C++ TQ R+RIHCS C +T+C +C P Y
Sbjct: 884 MVRVSSQQYHCLHQWEHNKEITVVAHINCHFCKQPTQLRSRIHCSTCKLTSCFMCAPIYC 943
Query: 61 GQKVPILPS-STPFFPNKLLQ 2
V P TPF N LLQ
Sbjct: 944 NITVQQQPKPPTPFNTNTLLQ 964
>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|540357465|gb|AGV08293.1| ORF3
[Piper yellow mottle virus]
Length = 1925
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETN--DLQRSIQTLILSGNIFMLGQIDGGYRPQIKVTD 224
+++SV EGE+ SDAIY++SEGE+ + + I + +G+ G ++P IKVT
Sbjct: 930 DVVSVSEGEDDSDAIYSVSEGEDGSIATMTHYINVFFEEDRTYWVGKA-GSWQPMIKVTQ 988
Query: 223 QQYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYFGQKVPI 44
+ ++C H W+ N D PI+C C+R++QK RIHC C +T+C LC + F + + +
Sbjct: 989 KVHDCQHCWMENTDVPNDGPIQCLCCKRNSQKNFRIHCPICKVTSCGLCSTFCFDKSIQV 1048
Query: 43 LPS-STPFFPNKLLQ 2
P+ P LL+
Sbjct: 1049 KKEYVAPYNPRNLLE 1063
>emb|CAE81285.1| polyprotein [Cacao swollen shoot virus]
Length = 1770
Score = 95.9 bits (237), Expect = 5e-18
Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGNIFMLGQIDGGY--------RP 242
+I+SV+EGE+ SDAIY+ISE E +L + + +FM+ + D Y
Sbjct: 752 DIVSVEEGEDDSDAIYSISENENEEELDAEV----VQEKVFMMREEDQSYWLGKTNHWTA 807
Query: 241 QIKVTDQQYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYF 62
++V+ QQY C HQW N + I C C++ TQ R+RIHC C +T+C +C P Y
Sbjct: 808 MVRVSSQQYYCLHQWEHNKEITVVAHINCHFCKQLTQLRSRIHCPTCKLTSCFMCAPIYC 867
Query: 61 GQKVPILPS-STPFFPNKLLQ 2
KV P TPF N LLQ
Sbjct: 868 NIKVQQQPKPPTPFNINTLLQ 888
>gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]
Length = 1872
Score = 95.5 bits (236), Expect = 6e-18
Identities = 54/141 (38%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGNIFMLGQIDGGY--------RP 242
EI+SV+EGE SDAIY++SE EE +Q +L +FM+ + D Y
Sbjct: 857 EIVSVEEGEEDSDAIYSLSENEE------ELQDEVLHEKVFMIREGDQSYWMGKANHWTA 910
Query: 241 QIKVTDQQYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYF 62
++V+ QQY C HQW N + I C C++ T R R+HC C +T+C +C P Y
Sbjct: 911 MVRVSYQQYHCPHQWEHNKEIPIMALINCHFCKQPTNLRGRVHCPTCQLTSCYMCAPIYC 970
Query: 61 GQKVPILPSS-TPFFPNKLLQ 2
+V P + PF PN LLQ
Sbjct: 971 DVQVQQQPKTPIPFSPNALLQ 991
>emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]
Length = 1847
Score = 95.1 bits (235), Expect = 8e-18
Identities = 54/141 (38%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGNIFMLGQIDGGY--------RP 242
+I+SV+EGE+ SDAIY+ISE E +L + + +FM+ + D Y
Sbjct: 829 DIVSVEEGEDDSDAIYSISENENGEELDAEV----VQEKVFMMREEDQSYWLGKTNHWTA 884
Query: 241 QIKVTDQQYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYF 62
++V+ QQY C HQW N + I C C++ TQ R+RIHC C +T+C +C P Y
Sbjct: 885 MVRVSSQQYYCLHQWEHNKEITVVAHINCHFCKQPTQLRSRIHCPTCKLTSCFMCAPIYC 944
Query: 61 GQKVPILPS-STPFFPNKLLQ 2
V P TPF N LLQ
Sbjct: 945 NITVQQQPKPPTPFNTNTLLQ 965
>ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|347871|gb|AAA03171.1|
polyprotein [Cacao swollen shoot virus]
Length = 1834
Score = 92.4 bits (228), Expect = 5e-17
Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 9/141 (6%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGNIFMLGQIDGGY--------RP 242
+I+SV+EGE SDAIY+ISE E+ + T ++ +FM+ + D Y
Sbjct: 824 DIVSVEEGEEESDAIYSISENEDGE-----LDTEVVHEKVFMMREEDQSYWLGKTNHWTA 878
Query: 241 QIKVTDQQYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYF 62
++V+ QQY C HQW N + I C C++ TQ R+RIHC C +T+C +C P Y
Sbjct: 879 MVRVSSQQYHCMHQWEHNKEILVVAHINCHFCKQPTQLRSRIHCPTCQLTSCFMCAPIYC 938
Query: 61 GQKVPILPS-STPFFPNKLLQ 2
V P PF + LLQ
Sbjct: 939 NMIVQQQPKPPVPFNTHTLLQ 959
>emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]
Length = 1839
Score = 89.0 bits (219), Expect = 6e-16
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGNIFMLGQIDGGY--------RP 242
+I+SV+EGE SDAIY+ISE E+ + T + +F++ + D Y
Sbjct: 824 DIVSVEEGEEESDAIYSISENEDGE-----LDTEAVHEKVFVMREEDQSYWLGKTNHWTA 878
Query: 241 QIKVTDQQYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYF 62
++V+ QQY C HQW N + I C C++ TQ R+RIHC C +T+C +C P Y
Sbjct: 879 MVRVSSQQYHCMHQWEHNKEILVVAHINCHFCKQPTQLRSRIHCPTCQLTSCFMCAPIYC 938
Query: 61 GQKVPILPS-STPFFPNKLLQ 2
V P PF + LLQ
Sbjct: 939 NIMVQQQPKPPVPFNSHTLLQ 959
>emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot virus]
Length = 1868
Score = 88.2 bits (217), Expect = 1e-15
Identities = 52/141 (36%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Frame = -1
Query: 397 EILSVQEGENLSDAIYNISEGEETNDLQRSIQTLILSGNIFMLGQIDGGY--------RP 242
+I+SV+EGE SDAIY+ISE EE +L+ + + IFM+ + D Y
Sbjct: 855 DIVSVEEGEEESDAIYSISENEE--ELKEEV---VHQEKIFMMKEEDQSYWLGKPNHWTA 909
Query: 241 QIKVTDQQYECAHQWIANGDTYPPQPIKCTGCQRDTQKRARIHCSNCLITACNLCGPYYF 62
++V QQY C HQW N + I C C++ T ++R+HC C +T+C +C P Y
Sbjct: 910 MVRVNHQQYHCEHQWEHNKEITVLAHISCHFCKQPTNFKSRVHCPICKLTSCFMCSPIYC 969
Query: 61 GQKVPILPSS-TPFFPNKLLQ 2
+V P + PF N LLQ
Sbjct: 970 NIQVQQQPKAPLPFNANSLLQ 990