BLASTX nr result
ID: Zingiber25_contig00045724
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00045724
(338 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|... 81 2e-13
gb|ACH86211.1| unknown [Citrus yellow mosaic virus] 73 4e-11
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 72 1e-10
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 71 1e-10
gb|AER00538.1| ORF III [Citrus yellow mosaic virus] 71 2e-10
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 70 2e-10
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 70 2e-10
ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus] gi|16... 70 2e-10
gb|ABU93491.1| polyprotein [Citrus yellow mosaic virus] 67 2e-09
gb|ABU93490.1| polyprotein [Citrus yellow mosaic virus] 67 2e-09
gb|AER00544.1| ORF III [Citrus yellow mosaic virus] 67 3e-09
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|gb|AEF56561.1|
polyprotein [Fig badnavirus 1]
Length = 1837
Score = 80.9 bits (198), Expect = 2e-13
Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = +1
Query: 4 WCESEIERLKQEVSYYKNLYKELNLERDLQRDFENLATTHFEEEGDEENDL-VTSSQLAH 180
WCE EIERL +EV +YK LY+ L +E+ L++D+E L +EGD+E + +
Sbjct: 989 WCEVEIERLNKEVKHYKGLYEALLMEKSLRKDYEEL------KEGDKERRKGIMIQEPEE 1042
Query: 181 VLYTEATERVSLTQGSPSPRLVKILLYNLQVEIDIPGIPKFILREILDTGAT 336
V Y E++ + VK +LYN +E +IP + +F +R ILDTGA+
Sbjct: 1043 VNYLGEDEKILAAGTEEKKKFVKNMLYNFDIEFEIPDVSRFRVRAILDTGAS 1094
>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
Length = 1490
Score = 72.8 bits (177), Expect = 4e-11
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +1
Query: 1 SWCESEIERLKQEVSYYKNLYKELNLERDLQRDFENLATTHFEEEGDEENDLVTSSQLAH 180
+WC +EI RLK+EV++YK L +E L+ L++ + LA T D+ V + +
Sbjct: 612 AWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGTDARRRKDKG---VVIDEGSC 668
Query: 181 VLYTEATERVSLTQGSPS---PRLVKILLYNLQVEIDIPGIPKFILREILDTGAT 336
E T R+ + G R VK +LYN+ V ++IPGIP F ++ ILDTGAT
Sbjct: 669 YFNPEETTRI-IAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGAT 722
>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
Length = 1976
Score = 71.6 bits (174), Expect = 1e-10
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = +1
Query: 1 SWCESEIERLKQEVSYYKNLYKELNLERDLQRDFENLATTHFEEEGDEENDLVTSSQLAH 180
+WC +EI RLK+EV++YK L +E L+ L++ + LA D+ V + +
Sbjct: 1096 AWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGADSRRRKDKG---VVIDEGSC 1152
Query: 181 VLYTEATERVSL---TQGSPSPRLVKILLYNLQVEIDIPGIPKFILREILDTGAT 336
E T R+ TQ + + R VK +LYN+ V I+IPGIP F ++ ILDTGAT
Sbjct: 1153 YFNPEETTRIVAHGDTQVTKT-RPVKNMLYNMDVRIEIPGIPAFTVKAILDTGAT 1206
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 71.2 bits (173), Expect = 1e-10
Identities = 44/115 (38%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Frame = +1
Query: 1 SWCESEIERLKQEVSYYKNLYKELNLERDLQRDFENLATTHFEEEGDEENDLVTSSQLAH 180
+WC +EI RLK+EV++YK L +E L+ L++ + LA T D+ V + +
Sbjct: 1089 AWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGTDARRRKDKG---VVIDEGSC 1145
Query: 181 VLYTEATERVSL---TQGSPSPRLVKILLYNLQVEIDIPGIPKFILREILDTGAT 336
E T R+ TQ + + R V+ +LYN+ V ++IPGIP F ++ ILDTGAT
Sbjct: 1146 YFNPEETTRIVAHGDTQVTKT-RPVRNMLYNMDVRMEIPGIPAFTVKAILDTGAT 1199
>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
Length = 1982
Score = 70.9 bits (172), Expect = 2e-10
Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Frame = +1
Query: 1 SWCESEIERLKQEVSYYKNLYKELNLERDLQRDFENLATTHFEEEGDEENDLVTSSQLAH 180
+WC +EI RLK+EV++YK L +E L+ L++ + LA D+ V + +
Sbjct: 1103 AWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGVDSRRRKDKG---VVIDEGSC 1159
Query: 181 VLYTEATERVSLTQGSPS---PRLVKILLYNLQVEIDIPGIPKFILREILDTGAT 336
E T R+ + G R VK +LYN+ V ++IPGIP F ++ ILDTGAT
Sbjct: 1160 YFNPEETTRI-IAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGAT 1213
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 70.5 bits (171), Expect = 2e-10
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = +1
Query: 1 SWCESEIERLKQEVSYYKNLYKELNLERDLQRDFENLATTHFEEEGDEENDLVTSSQLAH 180
+WC +EI RLK+EV++YK L +E L+ L++ + LA D+ V + +
Sbjct: 1088 AWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGADSRRRKDKG---VVIDEGSC 1144
Query: 181 VLYTEATERVSL---TQGSPSPRLVKILLYNLQVEIDIPGIPKFILREILDTGAT 336
E T R+ TQ + + R VK +LYN+ V ++IPGIP F ++ ILDTGAT
Sbjct: 1145 YFNPEETTRIVAHGDTQVTKT-RPVKNMLYNMDVRMEIPGIPAFTVKAILDTGAT 1198
>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
Length = 1979
Score = 70.5 bits (171), Expect = 2e-10
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = +1
Query: 1 SWCESEIERLKQEVSYYKNLYKELNLERDLQRDFENLATTHFEEEGDEENDLVTSSQLAH 180
+WC +EI RLK+EV++YK L +E L+ L++ + LA D+ V + +
Sbjct: 1098 AWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGADSRRRKDKG---VVIDEGSC 1154
Query: 181 VLYTEATERVSL---TQGSPSPRLVKILLYNLQVEIDIPGIPKFILREILDTGAT 336
E T R+ TQ + + R VK +LYN+ V ++IPGIP F ++ ILDTGAT
Sbjct: 1155 YFNPEETTRIVAHGDTQVTKT-RPVKNMLYNMDVRMEIPGIPAFTVKAILDTGAT 1208
>ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus]
gi|16416939|gb|AAL18495.1|AF347695_3 unknown [citrus
yellow mosaic virus]
Length = 1983
Score = 70.5 bits (171), Expect = 2e-10
Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Frame = +1
Query: 1 SWCESEIERLKQEVSYYKNLYKELNLERDLQRDFENLATTHFEEEGDEENDLVTSSQLAH 180
+WC +EI RLK+EV++YK L +E L+ L++ + LA D+ + + +
Sbjct: 1104 AWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGVDSRRRKDKG---IVIDEGSC 1160
Query: 181 VLYTEATERVSLTQGSPS---PRLVKILLYNLQVEIDIPGIPKFILREILDTGAT 336
E T R+ + G R VK +LYN+ V ++IPGIP F ++ ILDTGAT
Sbjct: 1161 YFNPEETTRI-IAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGAT 1214
>gb|ABU93491.1| polyprotein [Citrus yellow mosaic virus]
Length = 284
Score = 67.4 bits (163), Expect = 2e-09
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Frame = +1
Query: 1 SWCESEIERLKQEVSYYKNLYKELNLERDLQRDFENLATTHFEEEGDEENDLVTSSQLAH 180
+WC +EI RLK+EV++YK L +E L+ L++ + LA D+ V + +
Sbjct: 176 AWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELARADSRRRKDKG---VVIDEGSC 232
Query: 181 VLYTEATERVSLTQGS---PSPRLVKILLYNLQVEIDIPGIPKFILREILDTG 330
E T R+ + G R VK +LYN+ V ++IPGIP F ++ ILDTG
Sbjct: 233 YFNPEETTRI-VAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTG 284
>gb|ABU93490.1| polyprotein [Citrus yellow mosaic virus]
Length = 284
Score = 67.0 bits (162), Expect = 2e-09
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Frame = +1
Query: 1 SWCESEIERLKQEVSYYKNLYKELNLERDLQRDFENLATTHFEEEGDEENDLVTSSQLAH 180
+WC +EI RLK+EV++YK L +E L+ L++ + LA D+ V + +
Sbjct: 176 AWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGADSRRRKDKG---VVIDEGSC 232
Query: 181 VLYTEATERVSL---TQGSPSPRLVKILLYNLQVEIDIPGIPKFILREILDTG 330
E T R+ TQ + + R VK +LYN+ V ++IPGIP F ++ ILDTG
Sbjct: 233 YFNPEETTRIVAHGDTQVTKT-RPVKNMLYNMDVRMEIPGIPAFTVKAILDTG 284
>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
Length = 1976
Score = 66.6 bits (161), Expect = 3e-09
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Frame = +1
Query: 1 SWCESEIERLKQEVSYYKNLYKELNLERDLQRDFENLATTHFEEEGDEENDLVTSSQLAH 180
+WC +EI RLK+EV++YK L +E L+ L++ + LA D+ V + +
Sbjct: 1096 AWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGADSRRRKDKG---VVIDEGSC 1152
Query: 181 VLYTEATERVSLTQGS---PSPRLVKILLYNLQVEIDIPGIPKFILREILDTGAT 336
E T R+ + G R V+ +LYN+ V ++IPGIP F ++ I DTGAT
Sbjct: 1153 YFNPEETTRI-VAHGDTQVTKTRPVRNMLYNMDVRMEIPGIPAFTVKTIHDTGAT 1206